instruction stringlengths 142 1.1k | input stringlengths 123 1.01k | response stringclasses 6
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<Instruct>: Given the context 'These include Notch, EGFR, the caspases Dronc, Drice, Dcp-1, Dream, the caspase activators, Rpr, Hid, and Grim, the caspase inhibitor DIAP1, and Lozenge or Klumpfuss.', select the correct biomedical concept corresponding to 'dream'. Answer using one of the provided options. | <Options>: A: drp1 (homo sapiens) (collapsin response mediator protein 1 (homo sapiens)) (aka collapsin response mediator protein 1)
B: dram (mus musculus) (aka dna-damage regulated autophagy modulator 1)
C: dream/strica (drosophila melanogaster) (aka ser/thr-rich caspase)
D: dream (homo sapiens) (aka potassium voltage... | C |
<Instruct>: Given the context 'These include Notch, EGFR, the caspases Dronc, Drice, Dcp-1, Dream, the caspase activators, Rpr, Hid, and Grim, the caspase inhibitor DIAP1, and Lozenge or Klumpfuss.', select the correct biomedical concept corresponding to 'rpr'. Answer using one of the provided options. | <Options>: A: rpr1 (mus musculus) (aka phosducin)
B: rpr (drosophila melanogaster) (ribonuclease p rna (drosophila melanogaster)) (aka ribonuclease p rna)
C: rpr (mus musculus) (ribonuclease p rna component h1 (mus musculus)) (aka ribonuclease p rna component h1)
D: rpr (drosophila melanogaster) (reaper (drosophila mel... | D |
<Instruct>: Given the context 'These include Notch, EGFR, the caspases Dronc, Drice, Dcp-1, Dream, the caspase activators, Rpr, Hid, and Grim, the caspase inhibitor DIAP1, and Lozenge or Klumpfuss.', select the correct biomedical concept corresponding to 'hid'. Answer using one of the provided options. | <Options>: A: hid (drosophila melanogaster) (aka head involution defective)
B: hid1 (mus musculus) (aka hid1 domain containing)
C: hiden (homo sapiens) (aka igf2bp1 associated definitive endoderm lncrna)
D: hid (mus musculus) (aka sterol o-acyltransferase 1)
E: hid-1 (homo sapiens) (aka hid1 domain containing)
F: None ... | A |
<Instruct>: Given the context 'These include Notch, EGFR, the caspases Dronc, Drice, Dcp-1, Dream, the caspase activators, Rpr, Hid, and Grim, the caspase inhibitor DIAP1, and Lozenge or Klumpfuss.', select the correct biomedical concept corresponding to 'grim'. Answer using one of the provided options. | <Options>: A: grm (mus musculus) (aka protein-tyrosine sulfotransferase 2)
B: grim (drosophila melanogaster) (aka grim)
C: drim (mus musculus) (aka utp20 small subunit processome component)
D: grm1 (mus musculus) (aka glutamate receptor, metabotropic 1)
E: grim-1 (mus musculus) (aka shq1 homolog (s. cerevisiae))
F: Non... | B |
<Instruct>: Given the context 'These include Notch, EGFR, the caspases Dronc, Drice, Dcp-1, Dream, the caspase activators, Rpr, Hid, and Grim, the caspase inhibitor DIAP1, and Lozenge or Klumpfuss.', select the correct biomedical concept corresponding to 'diap1'. Answer using one of the provided options. | <Options>: A: diap1 (drosophila melanogaster) (death-associated inhibitor of apoptosis 2 (drosophila melanogaster)) (aka death-associated inhibitor of apoptosis 2)
B: dia1 (mus musculus) (diaphanous related formin 1 (mus musculus)) (aka diaphanous related formin 1)
C: diap1 (rattus norvegicus) (aka diaphanous-related f... | D |
<Instruct>: Given the context 'These include Notch, EGFR, the caspases Dronc, Drice, Dcp-1, Dream, the caspase activators, Rpr, Hid, and Grim, the caspase inhibitor DIAP1, and Lozenge or Klumpfuss.', select the correct biomedical concept corresponding to 'lozenge'. Answer using one of the provided options. | <Options>: A: suppressor of lozenge (drosophila melanogaster) (aka suppressor of lozenge)
B: verge (homo sapiens) (aka apolipoprotein l domain containing 1)
C: lozengelike (drosophila melanogaster) (aka lozengelike)
D: lozenge (drosophila melanogaster) (aka lozenge)
E: lounger (drosophila melanogaster) (aka lounger)
F:... | D |
<Instruct>: Given the context 'These include Notch, EGFR, the caspases Dronc, Drice, Dcp-1, Dream, the caspase activators, Rpr, Hid, and Grim, the caspase inhibitor DIAP1, and Lozenge or Klumpfuss.', select the correct biomedical concept corresponding to 'klumpfuss'. Answer using one of the provided options. | <Options>: A: mkcsf (homo sapiens) (aka thrombopoietin)
B: kinesin-8 family plus-end directed microtubule motor klp5 (schizosaccharomyces pombe) (aka kinesin-8 family plus-end directed microtubule motor klp5)
C: pfkl (homo sapiens) (aka phosphofructokinase, liver type)
D: klumpfuss (drosophila melanogaster) (aka klumpf... | D |
<Instruct>: Given the context 'The echinus locus encodes multiple splice forms of a protein with homology to ubiquitin-specific proteases, but protease activity is unlikely to be required for echinus function, at least when echinus is overexpressed.', select the correct biomedical concept corresponding to 'echinus'. An... | <Options>: A: kel (cricetulus griseus) (aka kell metallo-endopeptidase (kell blood group))
B: atrichosis (mus musculus) (aka atrichosis)
C: echinoid (drosophila melanogaster) (aka echinoid)
D: kel (ovis aries) (aka kell metallo-endopeptidase (kell blood group))
E: echinus (drosophila melanogaster) (aka echinus)
F: None... | E |
<Instruct>: Given the context 'The echinus locus encodes multiple splice forms of a protein with homology to ubiquitin-specific proteases, but protease activity is unlikely to be required for echinus function, at least when echinus is overexpressed.', select the correct biomedical concept corresponding to 'echinus'. An... | <Options>: A: kel (cricetulus griseus) (aka kell metallo-endopeptidase (kell blood group))
B: itch (cricetulus griseus) (aka itchy e3 ubiquitin protein ligase)
C: auh (cricetulus griseus) (aka au rna binding methylglutaconyl-coa hydratase)
D: echinus-like (drosophila melanogaster) (aka echinus-like)
E: ensa (cricetulus... | F |
<Instruct>: Given the context 'The echinus locus encodes multiple splice forms of a protein with homology to ubiquitin-specific proteases, but protease activity is unlikely to be required for echinus function, at least when echinus is overexpressed.', select the correct biomedical concept corresponding to 'ubiquitin-sp... | <Options>: A: ubiquitin specific peptidase 6 (homo sapiens) (aka ubiquitin specific peptidase 6)
B: ubiquitin specific peptidase 3 (homo sapiens) (aka ubiquitin specific peptidase 3)
C: ubiquitin specific peptidase 2 (mus musculus) (aka ubiquitin specific peptidase 2)
D: ubiquitin specific peptidase 1 (mus musculus) (a... | F |
<Instruct>: Given the context 'The echinus locus encodes multiple splice forms of a protein with homology to ubiquitin-specific proteases, but protease activity is unlikely to be required for echinus function, at least when echinus is overexpressed.', select the correct biomedical concept corresponding to 'echinus'. An... | <Options>: A: itch (gallus gallus) (aka itchy e3 ubiquitin protein ligase)
B: echinus (drosophila melanogaster) (aka echinus)
C: kel (ovis aries) (aka kell metallo-endopeptidase (kell blood group))
D: auh (cricetulus griseus) (aka au rna binding methylglutaconyl-coa hydratase)
E: ensa (cricetulus griseus) (aka endosulf... | B |
<Instruct>: Given the context 'The echinus locus encodes multiple splice forms of a protein with homology to ubiquitin-specific proteases, but protease activity is unlikely to be required for echinus function, at least when echinus is overexpressed.', select the correct biomedical concept corresponding to 'echinus'. An... | <Options>: A: echinus (drosophila melanogaster) (aka echinus)
B: atrichosis (mus musculus) (aka atrichosis)
C: itch (cricetulus griseus) (aka itchy e3 ubiquitin protein ligase)
D: auh (cricetulus griseus) (aka au rna binding methylglutaconyl-coa hydratase)
E: kel (ovis aries) (aka kell metallo-endopeptidase (kell blood... | A |
<Instruct>: Given the context 'Characterization of likely echinus null alleles and genetic interactions suggests that echinus acts at a novel point(s) to regulate interommatidial cell sorting and/or cell death in the fly eye.', select the correct biomedical concept corresponding to 'echinus'. Answer using one of the pr... | <Options>: A: itch (gallus gallus) (aka itchy e3 ubiquitin protein ligase)
B: echinus-like (drosophila melanogaster) (aka echinus-like)
C: auh (cricetulus griseus) (aka au rna binding methylglutaconyl-coa hydratase)
D: echinus (drosophila melanogaster) (aka echinus)
E: kel (cricetulus griseus) (aka kell metallo-endopep... | D |
<Instruct>: Given the context 'Characterization of likely echinus null alleles and genetic interactions suggests that echinus acts at a novel point(s) to regulate interommatidial cell sorting and/or cell death in the fly eye.', select the correct biomedical concept corresponding to 'echinus'. Answer using one of the pr... | <Options>: A: echinus-like (drosophila melanogaster) (aka echinus-like)
B: itch (cricetulus griseus) (aka itchy e3 ubiquitin protein ligase)
C: itch (gallus gallus) (aka itchy e3 ubiquitin protein ligase)
D: ensa (cricetulus griseus) (aka endosulfine alpha)
E: echinus (drosophila melanogaster) (aka echinus)
F: None of ... | E |
<Instruct>: Given the context 'Saccharomyces cerevisiae HMO1 interacts with TFIID and participates in start site selection by RNA polymerase II.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provided options. | <Options>: A: hmox1 (homo sapiens) (aka heme oxygenase 1)
B: hao1 (homo sapiens) (aka hydroxyacid oxidase 1)
C: fmo1 (homo sapiens) (aka flavin containing dimethylaniline monoxygenase 1)
D: mho1 (saccharomyces cerevisiae s288c) (aka mho1p)
E: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
F: None of the above. | E |
<Instruct>: Given the context 'Saccharomyces cerevisiae HMO1 interacts with TFIID and participates in start site selection by RNA polymerase II.', select the correct biomedical concept corresponding to 'rna polymerase ii'. Answer using one of the provided options. | <Options>: A: polymerase (rna) ii (dna directed) polypeptide i (mus musculus) (aka polymerase (rna) ii (dna directed) polypeptide i)
B: rna polymerase i subunit b (homo sapiens) (aka rna polymerase i subunit b)
C: polymerase (rna) ii (dna directed) polypeptide b (mus musculus) (aka polymerase (rna) ii (dna directed) po... | F |
<Instruct>: Given the context 'Saccharomyces cerevisiae HMO1, a high mobility group B (HMGB) protein, associates with the rRNA locus and with the promoters of many ribosomal protein genes (RPGs).', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provided options. | <Options>: A: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
B: hmo1 (schizosaccharomyces pombe) (aka upstream binding transcription factor, rna polymerase i specific, hmo1)
C: mto1 (homo sapiens) (aka mitochondrial trna translation optimization 1)
D: fmo1 (homo sapiens) (aka flavin containing dimethylaniline monox... | A |
<Instruct>: Given the context 'Saccharomyces cerevisiae HMO1, a high mobility group B (HMGB) protein, associates with the rRNA locus and with the promoters of many ribosomal protein genes (RPGs).', select the correct biomedical concept corresponding to 'high mobility group b (hmgb) protein'. Answer using one of the pro... | <Options>: A: high mobility group box 2 (homo sapiens) (aka high mobility group box 2)
B: high mobility group box 3 (homo sapiens) (aka high mobility group box 3)
C: high mobility group box 1 (homo sapiens) (aka high mobility group box 1)
D: hmg-b (mus musculus) (aka high mobility group box 1, pseudogene 2)
E: high mob... | F |
<Instruct>: Given the context 'Here, the Sos recruitment system was used to show that HMO1 interacts with TBP and the N-terminal domain (TAND) of TAF1, which are integral components of TFIID.', select the correct biomedical concept corresponding to 'sos'. Answer using one of the provided options. | <Options>: A: sossa (homo sapiens) (aka integrator complex subunit 3)
B: sos1 (mus musculus) (aka sos ras/rac guanine nucleotide exchange factor 1)
C: sos (drosophila melanogaster) (aka son of sevenless)
D: sos ras/rac guanine nucleotide exchange factor 1 (homo sapiens) (aka sos ras/rac guanine nucleotide exchange fact... | D |
<Instruct>: Given the context 'Here, the Sos recruitment system was used to show that HMO1 interacts with TBP and the N-terminal domain (TAND) of TAF1, which are integral components of TFIID.', select the correct biomedical concept corresponding to 'sos'. Answer using one of the provided options. | <Options>: A: sossa (homo sapiens) (aka integrator complex subunit 3)
B: sos (drosophila melanogaster) (aka son of sevenless)
C: sos1 (arabidopsis thaliana) (aka sodium proton exchanger, putative (nhx7) (sos1))
D: sos1 (saccharomyces cerevisiae s288c) (aka 60s ribosomal protein ul29 rpl35a)
E: sos1 (mus musculus) (aka ... | F |
<Instruct>: Given the context 'Here, the Sos recruitment system was used to show that HMO1 interacts with TBP and the N-terminal domain (TAND) of TAF1, which are integral components of TFIID.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provided options. | <Options>: A: hao1 (homo sapiens) (aka hydroxyacid oxidase 1)
B: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
C: hmo1 (schizosaccharomyces pombe) (aka upstream binding transcription factor, rna polymerase i specific, hmo1)
D: fmo1 (homo sapiens) (aka flavin containing dimethylaniline monoxygenase 1)
E: ymo1 (homo... | B |
<Instruct>: Given the context 'Here, the Sos recruitment system was used to show that HMO1 interacts with TBP and the N-terminal domain (TAND) of TAF1, which are integral components of TFIID.', select the correct biomedical concept corresponding to 'tbp'. Answer using one of the provided options. | <Options>: A: tbp (homo sapiens) (aka tata-box binding protein)
B: tbp (rattus norvegicus) (aka tata box binding protein)
C: tbp (xenopus laevis) (tata-box binding protein s homeolog (xenopus laevis)) (aka tata-box binding protein s homeolog)
D: tbpii (homo sapiens) (aka tnf receptor superfamily member 1b)
E: tata-bind... | E |
<Instruct>: Given the context 'Here, the Sos recruitment system was used to show that HMO1 interacts with TBP and the N-terminal domain (TAND) of TAF1, which are integral components of TFIID.', select the correct biomedical concept corresponding to 'taf1'. Answer using one of the provided options. | <Options>: A: taf1 (saccharomyces cerevisiae s288c) (histone acetyltransferase (saccharomyces cerevisiae s288c)) (aka histone acetyltransferase)
B: taf1a (homo sapiens) (aka tata-box binding protein associated factor, rna polymerase i subunit a)
C: taf1 (xenopus laevis) (aka tata-box binding protein associated factor 1... | A |
<Instruct>: Given the context 'Biochemical studies revealed that HMO1 copurifies with TFIID and directly interacts with TBP but not with TAND.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provided options. | <Options>: A: hmo1 (schizosaccharomyces pombe) (aka upstream binding transcription factor, rna polymerase i specific, hmo1)
B: mto1 (homo sapiens) (aka mitochondrial trna translation optimization 1)
C: fmo1 (homo sapiens) (aka flavin containing dimethylaniline monoxygenase 1)
D: hmox1 (homo sapiens) (aka heme oxygenase... | E |
<Instruct>: Given the context 'Biochemical studies revealed that HMO1 copurifies with TFIID and directly interacts with TBP but not with TAND.', select the correct biomedical concept corresponding to 'tbp'. Answer using one of the provided options. | <Options>: A: tbp (drosophila melanogaster) (aka tata binding protein)
B: tata-binding protein (tbp) (schizosaccharomyces pombe) (aka tata-binding protein (tbp))
C: tata-binding protein (saccharomyces cerevisiae s288c) (aka tata-binding protein)
D: tbpii (homo sapiens) (aka tnf receptor superfamily member 1b)
E: tbp (m... | C |
<Instruct>: Given the context 'Deletion of HMO1 (Deltahmo1) causes a severe cold-sensitive growth defect and decreases transcription of some TAND-dependent genes.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provided options. | <Options>: A: hmo1 (schizosaccharomyces pombe) (aka upstream binding transcription factor, rna polymerase i specific, hmo1)
B: ymo1 (homo sapiens) (aka erythrocyte membrane protein band 4.1 like 5)
C: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
D: mto1 (homo sapiens) (aka mitochondrial trna translation optimizat... | C |
<Instruct>: Given the context 'Deletion of HMO1 (Deltahmo1) causes a severe cold-sensitive growth defect and decreases transcription of some TAND-dependent genes.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provided options. | <Options>: A: ymo1 (homo sapiens) (aka erythrocyte membrane protein band 4.1 like 5)
B: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
C: hpo1 (homo sapiens) (aka growth factor, augmenter of liver regeneration)
D: fmo1 (homo sapiens) (aka flavin containing dimethylaniline monoxygenase 1)
E: mho1 (saccharomyces cere... | B |
<Instruct>: Given the context 'Deltahmo1 also affects TFIID occupancy at some RPG promoters in a promoter-specific manner.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provided options. | <Options>: A: hmo1 (saccharomyces cerevisiae s288c) (aka hmo1p)
B: hpo1 (homo sapiens) (aka growth factor, augmenter of liver regeneration)
C: ymo1 (homo sapiens) (aka erythrocyte membrane protein band 4.1 like 5)
D: hao1 (homo sapiens) (aka hydroxyacid oxidase 1)
E: fmo1 (homo sapiens) (aka flavin containing dimethyla... | A |
<Instruct>: Given the context 'Interestingly, over-expression of HMO1 delays colony formation of taf1 mutants lacking TAND (taf1DeltaTAND), but not of the wild-type strain, indicating a functional link between HMO1 and TAND.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provid... | <Options>: A: fmo1 (homo sapiens) (aka flavin containing dimethylaniline monoxygenase 1)
B: hpo1 (homo sapiens) (aka growth factor, augmenter of liver regeneration)
C: ymo1 (homo sapiens) (aka erythrocyte membrane protein band 4.1 like 5)
D: mto1 (homo sapiens) (aka mitochondrial trna translation optimization 1)
E: hmo... | E |
<Instruct>: Given the context 'Interestingly, over-expression of HMO1 delays colony formation of taf1 mutants lacking TAND (taf1DeltaTAND), but not of the wild-type strain, indicating a functional link between HMO1 and TAND.', select the correct biomedical concept corresponding to 'taf1'. Answer using one of the provid... | <Options>: A: taf1 (saccharomyces cerevisiae s288c) (siderophore transporter (saccharomyces cerevisiae s288c)) (aka siderophore transporter)
B: taf1 (saccharomyces cerevisiae s288c) (histone acetyltransferase (saccharomyces cerevisiae s288c)) (aka histone acetyltransferase)
C: taf1 (schizosaccharomyces pombe) (transcri... | B |
<Instruct>: Given the context 'Interestingly, over-expression of HMO1 delays colony formation of taf1 mutants lacking TAND (taf1DeltaTAND), but not of the wild-type strain, indicating a functional link between HMO1 and TAND.', select the correct biomedical concept corresponding to 'taf1'. Answer using one of the provid... | <Options>: A: taf1 (mus musculus) (aka tata-box binding protein associated factor 1)
B: taf1 (homo sapiens) (aka tata-box binding protein associated factor 1)
C: taf1a (homo sapiens) (aka tata-box binding protein associated factor, rna polymerase i subunit a)
D: taff1 (homo sapiens) (aka zinc finger fyve-type containin... | F |
<Instruct>: Given the context 'Interestingly, over-expression of HMO1 delays colony formation of taf1 mutants lacking TAND (taf1DeltaTAND), but not of the wild-type strain, indicating a functional link between HMO1 and TAND.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provid... | <Options>: A: ymo1 (homo sapiens) (aka erythrocyte membrane protein band 4.1 like 5)
B: mho1 (saccharomyces cerevisiae s288c) (aka mho1p)
C: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
D: hpo1 (homo sapiens) (aka growth factor, augmenter of liver regeneration)
E: hmox1 (homo sapiens) (aka heme oxygenase 1)
F: No... | C |
<Instruct>: Given the context 'Furthermore, Deltahmo1 exhibits synthetic growth defects in some spt15 (TBP) and toa1 (TFIIA) mutants while it rescues growth defects of some sua7 (TFIIB) mutants.', select the correct biomedical concept corresponding to 'hmo1'. Answer using one of the provided options. | <Options>: A: hmox1 (homo sapiens) (aka heme oxygenase 1)
B: mho1 (saccharomyces cerevisiae s288c) (aka mho1p)
C: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
D: mto1 (homo sapiens) (aka mitochondrial trna translation optimization 1)
E: hmo1 (schizosaccharomyces pombe) (aka upstream binding transcription factor, ... | C |
<Instruct>: Given the context 'Furthermore, Deltahmo1 exhibits synthetic growth defects in some spt15 (TBP) and toa1 (TFIIA) mutants while it rescues growth defects of some sua7 (TFIIB) mutants.', select the correct biomedical concept corresponding to 'spt15'. Answer using one of the provided options. | <Options>: A: spt10 (saccharomyces cerevisiae s288c) (aka spt10p)
B: sds15 (saccharomyces cerevisiae s288c) (aka kinesin motor protein cin8)
C: taf15 (homo sapiens) (aka tata-box binding protein associated factor 15)
D: spt5 (homo sapiens) (aka spt5 homolog, dsif elongation factor subunit)
E: spt15 (saccharomyces cerev... | E |
<Instruct>: Given the context 'Furthermore, Deltahmo1 exhibits synthetic growth defects in some spt15 (TBP) and toa1 (TFIIA) mutants while it rescues growth defects of some sua7 (TFIIB) mutants.', select the correct biomedical concept corresponding to 'tbp'. Answer using one of the provided options. | <Options>: A: tbp (xenopus laevis) (tata-box binding protein s homeolog (xenopus laevis)) (aka tata-box binding protein s homeolog)
B: tata-binding protein (saccharomyces cerevisiae s288c) (aka tata-binding protein)
C: tata-binding protein (tbp) (schizosaccharomyces pombe) (aka tata-binding protein (tbp))
D: tbp (mus m... | B |
<Instruct>: Given the context 'Furthermore, Deltahmo1 exhibits synthetic growth defects in some spt15 (TBP) and toa1 (TFIIA) mutants while it rescues growth defects of some sua7 (TFIIB) mutants.', select the correct biomedical concept corresponding to 'toa1'. Answer using one of the provided options. | <Options>: A: tsta1 (homo sapiens) (aka ribosomal protein l13a)
B: toa1 (saccharomyces cerevisiae s288c) (aka transcription initiation factor iia large subunit)
C: ctaa1 (homo sapiens) (aka cataract, anterior polar 1)
D: to1 (arabidopsis thaliana) (aka thioredoxin o1)
E: transcription factor tfiia complex large subunit... | B |
<Instruct>: Given the context 'Furthermore, Deltahmo1 exhibits synthetic growth defects in some spt15 (TBP) and toa1 (TFIIA) mutants while it rescues growth defects of some sua7 (TFIIB) mutants.', select the correct biomedical concept corresponding to 'tfiia'. Answer using one of the provided options. | <Options>: A: tfiia1 (mus musculus) (aka general transcription factor ii a, 1)
B: tfiia (xenopus laevis) (general transcription factor iia 1 l homeolog (xenopus laevis)) (aka general transcription factor iia 1 l homeolog)
C: tfiias (homo sapiens) (aka general transcription factor iia subunit 2)
D: tfiia (drosophila mel... | F |
<Instruct>: Given the context 'Furthermore, Deltahmo1 exhibits synthetic growth defects in some spt15 (TBP) and toa1 (TFIIA) mutants while it rescues growth defects of some sua7 (TFIIB) mutants.', select the correct biomedical concept corresponding to 'sua7'. Answer using one of the provided options. | <Options>: A: sua7 (saccharomyces cerevisiae s288c) (aka transcription factor sua7)
B: sua8 (saccharomyces cerevisiae s288c) (aka dna-directed rna polymerase ii core subunit rpo21)
C: uba7 (sus scrofa) (aka ubiquitin like modifier activating enzyme 7)
D: sua7 (schizosaccharomyces pombe) (aka transcription factor tfiib)... | A |
<Instruct>: Given the context 'Furthermore, Deltahmo1 exhibits synthetic growth defects in some spt15 (TBP) and toa1 (TFIIA) mutants while it rescues growth defects of some sua7 (TFIIB) mutants.', select the correct biomedical concept corresponding to 'tfiib'. Answer using one of the provided options. | <Options>: A: tfiiaa/b (mus musculus) (aka general transcription factor ii a, 1)
B: general transcription factor iib (homo sapiens) (aka general transcription factor iib)
C: tfiiib'' (homo sapiens) (aka bdp1 general transcription factor iiib subunit)
D: tf1b (homo sapiens) (aka tripartite motif containing 28)
E: transc... | F |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
B: hpo1 (homo sapiens) (aka growth factor, augmenter of liver regeneration)
C: hmox1 (homo sapiens) (aka heme oxygenase 1)
D: mto1 (homo sapiens) (aka mitochondrial trna translation optimization 1)
E: mho1 (saccharomyces cerevisiae s288c) (aka mho1p)
F: N... | A |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: rps5 (arabidopsis thaliana) (aka disease resistance protein (cc-nbs-lrr class) family)
B: rps5 (mus musculus) (aka ribosomal protein s5)
C: rps5 (saccharomyces cerevisiae s288c) (aka 40s ribosomal protein us7 rps5)
D: rps5 (drosophila melanogaster) (aka ribosomal protein s5a)
E: rps-5 (caenorhabditis eleg... | C |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: rps5 (schizosaccharomyces pombe) (aka 40s ribosomal protein us7)
B: rps5 (mus musculus) (aka ribosomal protein s5)
C: ribosomal protein s5 (homo sapiens) (aka ribosomal protein s5)
D: rps5 (drosophila melanogaster) (aka ribosomal protein s5a)
E: rps5 (rattus norvegicus) (aka ribosomal protein s5)
F: None ... | F |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: ppp1r16a (mus musculus) (aka protein phosphatase 1, regulatory subunit 16a)
B: ppp1r16a (homo sapiens) (aka protein phosphatase 1 regulatory subunit 16a)
C: rps11a (saccharomyces cerevisiae s288c) (aka 40s ribosomal protein us17 rps11a)
D: rps16 (arabidopsis thaliana) (aka ribosomal protein s16)
E: rps16a... | E |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: rpl22b (saccharomyces cerevisiae s288c) (aka 60s ribosomal protein el22 rpl22b)
B: rpl23ab (arabidopsis thaliana) (aka ribosomal protein l23ab)
C: rps23b (saccharomyces cerevisiae s288c) (aka 40s ribosomal protein us12 rps23b)
D: rpl23b (saccharomyces cerevisiae s288c) (aka 60s ribosomal protein ul14 rpl2... | D |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: 60s ribosomal protein el27 rpl27b (saccharomyces cerevisiae s288c) (aka 60s ribosomal protein el27 rpl27b)
B: rpl27a (homo sapiens) (aka ribosomal protein l27a)
C: rpl26b (saccharomyces cerevisiae s288c) (aka 60s ribosomal protein ul24 rpl26b)
D: rpl27ab (drosophila melanogaster) (aka ribosomal protein l2... | A |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: rpl32 (homo sapiens) (aka ribosomal protein l32)
B: rpl32 (rattus norvegicus) (aka ribosomal protein l32)
C: rpl32 (saccharomyces cerevisiae s288c) (aka 60s ribosomal protein el32 rpl32)
D: rpl32 (arabidopsis thaliana) (aka ribosomal protein l32)
E: rpl32 (xenopus laevis) (aka ribosomal protein l32 l home... | C |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: rps31a (saccharomyces cerevisiae s288c) (aka 40s ribosomal protein es25 rps25a)
B: rps2p31 (homo sapiens) (aka ribosomal protein s2 pseudogene 31)
C: rps31 (saccharomyces cerevisiae s288c) (aka ubiquitin-40s ribosomal protein es31 rps31 fusion protein)
D: rps31 (drosophila melanogaster) (ribosomal protein... | C |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: rpl10 (rattus norvegicus) (ribosomal protein l10 (rattus norvegicus)) (aka ribosomal protein l10)
B: rpl10 (homo sapiens) (ribosomal protein l15 (homo sapiens)) (aka ribosomal protein l15)
C: rpl10 (saccharomyces cerevisiae s288c) (aka 60s ribosomal protein ul16 rpl10)
D: rpl10 (schizosaccharomyces pombe)... | C |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: tef2 (saccharomyces cerevisiae s288c) (aka translation elongation factor ef-1 alpha)
B: tff2 (homo sapiens) (aka trefoil factor 2)
C: tef2 (xenopus laevis) (speckle type poz protein l homeolog (xenopus laevis)) (aka speckle type poz protein l homeolog)
D: sef2 (homo sapiens) (aka transcription factor 4)
E... | A |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: adh1 (arabidopsis thaliana) (aka alcohol dehydrogenase 1)
B: adh1 (homo sapiens) (aka alcohol dehydrogenase 1a (class i), alpha polypeptide)
C: alcohol dehydrogenase adh1 (saccharomyces cerevisiae s288c) (aka alcohol dehydrogenase adh1)
D: adh1a (rattus norvegicus) (aka alcohol dehydrogenase 1c (class i),... | C |
<Instruct>: Given the context 'Importantly, Deltahmo1 causes an upstream shift in transcriptional start sites of RPS5, RPS16A, RPL23B, RPL27B and RPL32, but not of RPS31, RPL10, TEF2 and ADH1, indicating that HMO1 may participate in start site selection of a subset of class II genes presumably via its interaction with ... | <Options>: A: mto1 (homo sapiens) (aka mitochondrial trna translation optimization 1)
B: mho1 (saccharomyces cerevisiae s288c) (aka mho1p)
C: hmox1 (homo sapiens) (aka heme oxygenase 1)
D: ymo1 (homo sapiens) (aka erythrocyte membrane protein band 4.1 like 5)
E: hmo1p (saccharomyces cerevisiae s288c) (aka hmo1p)
F: Non... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: nf-kb1 (mus musculus) (aka nuclear factor of kappa light polypeptide gene enhancer in b cells 1, p105)
B: nf-kb1 (homo sapiens) (aka nuclear factor kappa b subunit 1)
C: nuclear factor kappa b subunit 1 (rattus norvegicus) (aka nuclear factor kappa b subunit 1)
D: None of the above. | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: nuclear factor kappa b subunit 1 (rattus norvegicus) (aka nuclear factor kappa b subunit 1)
B: nfkb1 (mus musculus) (aka nuclear factor of kappa light polypeptide gene enhancer in b cells 1, p105)
C: None of the above. | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: rela proto-oncogene, nf-kb subunit (homo sapiens) (aka rela proto-oncogene, nf-kb subunit)
B: rela (rattus norvegicus) (aka rela proto-oncogene, nf-kb subunit)
C: rela (mus musculus) (aka v-rel reticuloendotheliosis viral oncogene homolog a (avian))
D: nf-kappab (mus musculus) (aka nuclear factor of kappa... | A |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: ikbkg (homo sapiens) (aka inhibitor of nuclear factor kappa b kinase regulatory subunit gamma)
B: ikbka (homo sapiens) (aka component of inhibitor of nuclear factor kappa b kinase complex)
C: ikbkg (mus musculus) (aka inhibitor of kappab kinase gamma)
D: ikbkgp (homo sapiens) (aka inhibitor of nuclear fac... | A |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: nfkbikb (mus musculus) (aka inhibitor of kappab kinase beta)
B: nfkbib (rattus norvegicus) (aka nfkb inhibitor beta)
C: nfkbib (homo sapiens) (aka nfkb inhibitor beta)
D: nfkbikb (homo sapiens) (aka inhibitor of nuclear factor kappa b kinase subunit beta)
E: nuclear factor of kappa light polypeptide gene ... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: p52 (homo sapiens) (nuclear factor kappa b subunit 2 (homo sapiens)) (aka nuclear factor kappa b subunit 2)
B: nfkb2 (mus musculus) (aka nuclear factor of kappa light polypeptide gene enhancer in b cells 2, p49/p100)
C: p65 nf-kappa b (mus musculus) (aka v-rel reticuloendotheliosis viral oncogene homolog ... | A |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: rel proto-oncogene, nf-kb subunit (rattus norvegicus) (aka rel proto-oncogene, nf-kb subunit)
B: rel-b (homo sapiens) (aka relb proto-oncogene, nf-kb subunit)
C: rel (drosophila melanogaster) (aka relish)
D: c-rel (homo sapiens) (aka rel proto-oncogene, nf-kb subunit)
E: v-rel reticuloendotheliosis viral ... | D |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: chuk (rattus norvegicus) (aka component of inhibitor of nuclear factor kappa b kinase complex)
B: chuk (danio rerio) (aka component of inhibitor of nuclear factor kappa b kinase complex)
C: chuk (homo sapiens) (aka component of inhibitor of nuclear factor kappa b kinase complex)
D: hck proto-oncogene, src... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: mcl1 (rattus norvegicus) (aka mcl1 apoptosis regulator, bcl2 family member)
B: mcl1s (homo sapiens) (aka mcl1 apoptosis regulator, bcl2 family member)
C: mcl1 (mus musculus) (aka myeloid cell leukemia sequence 1)
D: mcl1l (danio rerio) (aka bcl2 like 10)
E: mycl proto-oncogene, bhlh transcription factor (... | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: tnfaip3 (rattus norvegicus) (aka tnf alpha induced protein 3)
B: tnfaip4 (homo sapiens) (aka ephrin a1)
C: tnfaip3 (homo sapiens) (aka tnf alpha induced protein 3)
D: tnfaip3 interacting protein 3 (homo sapiens) (aka tnfaip3 interacting protein 3)
E: tnfaip2 (homo sapiens) (aka tnf alpha induced protein 2... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: a20 (mus musculus) (aka tumor necrosis factor, alpha-induced protein 3)
B: family with sequence similarity 90 member a20 (homo sapiens) (aka family with sequence similarity 90 member a20)
C: a20 (homo sapiens) (tnf alpha induced protein 3 (homo sapiens)) (aka tnf alpha induced protein 3)
D: expansin a20 (... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: gadd45a (homo sapiens) (aka growth arrest and dna damage inducible alpha)
B: gadd45b (danio rerio) (aka growth arrest and dna-damage-inducible, beta a)
C: gadd45b (homo sapiens) (aka growth arrest and dna damage inducible beta)
D: gadd45b (mus musculus) (aka growth arrest and dna-damage-inducible 45 beta)... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: gadd45b (mus musculus) (aka growth arrest and dna-damage-inducible 45 beta)
B: gadd45a (mus musculus) (aka growth arrest and dna-damage-inducible 45 alpha)
C: gadd45b (rattus norvegicus) (aka growth arrest and dna-damage-inducible, beta)
D: gadd45b (cricetulus griseus) (aka growth arrest and dna damage in... | F |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: faslg (homo sapiens) (aka fas ligand)
B: faslg (ovis aries) (aka fas ligand)
C: fas-lg (mus musculus) (aka fas ligand)
D: faslg (cricetulus griseus) (aka fas ligand)
E: fasl (rattus norvegicus) (aka fas ligand)
F: None of the above. | A |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: mcl1 (rattus norvegicus) (aka mcl1 apoptosis regulator, bcl2 family member)
B: mcl-1 (mus musculus) (aka myeloid cell leukemia sequence 1)
C: mcl1-rs1 (mus musculus) (aka myeloid cell leukemia sequence 1, related sequence 1)
D: mcl1 (schizosaccharomyces pombe) (aka dna polymerase alpha accessory factor mc... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: ier3.l (xenopus laevis) (aka immediate early response 3 l homeolog)
B: ier3ip1 (homo sapiens) (aka immediate early response 3 interacting protein 1)
C: estradiol regulated response qtl 3 (mus musculus) (aka estradiol regulated response qtl 3)
D: ier3 (rattus norvegicus) (aka immediate early response 3)
E:... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: tnfrsf10b (rattus norvegicus) (aka tnf receptor superfamily member 10b)
B: tnfrsf10d (homo sapiens) (aka tnf receptor superfamily member 10d)
C: tnf receptor superfamily member 10b (homo sapiens) (aka tnf receptor superfamily member 10b)
D: tnfrsf1b (mus musculus) (aka tumor necrosis factor receptor super... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: tnfr2 (homo sapiens) (aka tnf receptor superfamily member 1b)
B: trailr2 (mus musculus) (aka tumor necrosis factor receptor superfamily, member 10b)
C: trail-r3 (homo sapiens) (aka tnf receptor superfamily member 10c)
D: dr5 (homo sapiens) (aka tnf receptor superfamily member 10b)
E: dcr2 (homo sapiens) (... | D |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: cd40 (mus musculus) (aka cd40 antigen)
B: cd40 molecule (homo sapiens) (aka cd40 molecule)
C: cd40l (mus musculus) (aka cd40 ligand)
D: cd40 molecule (rattus norvegicus) (aka cd40 molecule)
E: cd40l (homo sapiens) (aka cd40 ligand)
F: None of the above. | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: cd48 molecule (homo sapiens) (aka cd48 molecule)
B: cd18 (homo sapiens) (aka integrin subunit beta 2)
C: cd148 (mus musculus) (aka protein tyrosine phosphatase receptor type j)
D: cd148 (homo sapiens) (aka protein tyrosine phosphatase receptor type j)
E: cd48 antigen (mus musculus) (aka cd48 antigen)
F: N... | A |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: tnfsf12 (mus musculus) (aka tumor necrosis factor (ligand) superfamily, member 12)
B: tnfsf11 (ovis aries) (aka tnf superfamily member 11)
C: tnfrsf21 (homo sapiens) (aka tnf receptor superfamily member 21)
D: tnfsf13 (homo sapiens) (aka tnf superfamily member 13)
E: tnf superfamily member 11 (homo sapien... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: opg (mus musculus) (aka tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin))
B: rankl (homo sapiens) (aka tnf superfamily member 11)
C: rankl (mus musculus) (aka tumor necrosis factor (ligand) superfamily, member 11)
D: opg (homo sapiens) (tnf receptor superfamily member 11b (homo sap... | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: tnf receptor superfamily member 11a (homo sapiens) (aka tnf receptor superfamily member 11a)
B: tnfrsf1a (homo sapiens) (aka tnf receptor superfamily member 1a)
C: tumor necrosis factor receptor superfamily, member 1a (mus musculus) (aka tumor necrosis factor receptor superfamily, member 1a)
D: tnfrsf11a ... | A |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: tumor necrosis factor receptor superfamily, member 1a (mus musculus) (aka tumor necrosis factor receptor superfamily, member 1a)
B: tnfrsf1a (homo sapiens) (aka tnf receptor superfamily member 1a)
C: tnfrsf11a (mus musculus) (aka tumor necrosis factor receptor superfamily, member 11a, nfkb activator)
D: t... | F |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: dr5 (homo sapiens) (aka tnf receptor superfamily member 10b)
B: ron (homo sapiens) (aka macrophage stimulating 1 receptor)
C: rank (rattus norvegicus) (aka tnf receptor superfamily member 11a)
D: rank (mus musculus) (aka tumor necrosis factor receptor superfamily, member 11a, nfkb activator)
E: rank (homo... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: ccl1 (mus musculus) (aka c-c motif chemokine ligand 1)
B: ccl2 (rattus norvegicus) (aka c-c motif chemokine ligand 2)
C: ccl1 (homo sapiens) (aka c-c motif chemokine ligand 1)
D: mcp-1 (mus musculus) (c-c motif chemokine ligand 2 (mus musculus)) (aka c-c motif chemokine ligand 2)
E: ccl2 (homo sapiens) (a... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: ccl1 (mus musculus) (aka c-c motif chemokine ligand 1)
B: mcp-1 (mus musculus) (mast cell protease 1 (mus musculus)) (aka mast cell protease 1)
C: ccl1 (homo sapiens) (aka c-c motif chemokine ligand 1)
D: mcp-1 (rattus norvegicus) (aka c-c motif chemokine ligand 2)
E: mcp1 (homo sapiens) (aka c-c motif ch... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: cd27lg (mus musculus) (aka cd70 antigen)
B: cd40lg (mus musculus) (aka cd40 ligand)
C: cd40lg (ovis aries) (aka cd40 ligand)
D: cd40l (homo sapiens) (aka cd40 ligand)
E: cd27lg (homo sapiens) (aka cd70 molecule)
F: None of the above. | D |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: interleukin 15 (homo sapiens) (aka interleukin 15)
B: il15 (ovis aries) (aka interleukin 15)
C: il15 (rattus norvegicus) (aka interleukin 15)
D: il15 (mus musculus) (aka interleukin 15)
E: None of the above. | A |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: bgp1 (homo sapiens) (aka cea cell adhesion molecule 1)
B: gbp1 (rattus norvegicus) (aka guanylate binding protein 1)
C: gbap1 (homo sapiens) (aka glucosylceramidase beta 1 like, pseudogene)
D: gbp1 (homo sapiens) (aka guanylate binding protein 1)
E: gbpi1 (homo sapiens) (aka protein phosphatase 1 regulato... | D |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: cyclin d1 (homo sapiens) (aka cyclin d1)
B: cyclin d2 (homo sapiens) (aka cyclin d2)
C: ccnd2 (mus musculus) (aka cyclin d2)
D: ccnd1 (mus musculus) (aka cyclin d1)
E: ccnd2 (rattus norvegicus) (aka cyclin d2)
F: None of the above. | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: ccn3 (homo sapiens) (aka cellular communication network factor 3)
B: ccnd3 (ovis aries) (aka cyclin d3)
C: cyclin d3 (homo sapiens) (aka cyclin d3)
D: ccnd3 (mus musculus) (aka cyclin d3)
E: ccnd3 (rattus norvegicus) (aka cyclin d3)
F: None of the above. | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: colony stimulating factor 1 receptor (rattus norvegicus) (aka colony stimulating factor 1 receptor)
B: csf1r (homo sapiens) (aka colony stimulating factor 1 receptor)
C: csf1r (mus musculus) (aka colony stimulating factor 1 receptor)
D: None of the above. | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: csf1 (ovis aries) (aka colony stimulating factor 1)
B: sdf1 (homo sapiens) (aka c-x-c motif chemokine ligand 12)
C: csf1 (rattus norvegicus) (aka colony stimulating factor 1)
D: csf1 (saccharomyces cerevisiae s288c) (aka csf1p)
E: colony stimulating factor 1 (homo sapiens) (aka colony stimulating factor 1... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: csf1 (ovis aries) (aka colony stimulating factor 1)
B: csf1 (saccharomyces cerevisiae s288c) (aka csf1p)
C: csf1 (rattus norvegicus) (aka colony stimulating factor 1)
D: sdf1 (homo sapiens) (aka c-x-c motif chemokine ligand 12)
E: csf1 (mus musculus) (aka colony stimulating factor 1 (macrophage))
F: None ... | F |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: sod2 (homo sapiens) (sod2 overlapping transcript 1 (homo sapiens)) (aka sod2 overlapping transcript 1)
B: mnsod (homo sapiens) (aka superoxide dismutase 2)
C: superoxide dismutase 2, mitochondrial (mus musculus) (aka superoxide dismutase 2, mitochondrial)
D: sod2 (rattus norvegicus) (aka superoxide dismut... | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: cxcl12 (cricetulus griseus) (aka c-x-c motif chemokine ligand 12)
B: sdf1 (homo sapiens) (aka c-x-c motif chemokine ligand 12)
C: cxcl12 (rattus norvegicus) (aka c-x-c motif chemokine ligand 12)
D: cxcl12 (xenopus laevis) (aka c-x-c motif chemokine ligand 12 l homeolog)
E: cxcl12 (danio rerio) (aka chemok... | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: sel (drosophila melanogaster) (aka seele)
B: sele (rattus norvegicus) (aka selectin e)
C: selectin e (homo sapiens) (aka selectin e)
D: sele (mus musculus) (aka selectin, endothelial cell)
E: selb/eefsec (drosophila melanogaster) (aka eukaryotic translation elongation factor, selenocysteine-specific)
F: N... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: tnc (mus musculus) (troponin c, cardiac/slow skeletal (mus musculus)) (aka troponin c, cardiac/slow skeletal)
B: tnc (rattus norvegicus) (aka tenascin c)
C: tn (homo sapiens) (tenascin c (homo sapiens)) (aka tenascin c)
D: tntc (homo sapiens) (aka troponin t2, cardiac type)
E: tn-c (homo sapiens) (troponi... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: vcam-1 (mus musculus) (aka vascular cell adhesion molecule 1)
B: icam1 (mus musculus) (aka intercellular adhesion molecule 1)
C: cell adhesion molecule 1 (homo sapiens) (aka cell adhesion molecule 1)
D: vascular cell adhesion molecule 1 (homo sapiens) (aka vascular cell adhesion molecule 1)
E: vcam1 (ratt... | D |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: icam1 (homo sapiens) (aka intercellular adhesion molecule 1)
B: icam1 (rattus norvegicus) (aka intercellular adhesion molecule 1)
C: icam-1 (mus musculus) (aka intercellular adhesion molecule 1)
D: vcam1 (mus musculus) (aka vascular cell adhesion molecule 1)
E: cd51 (homo sapiens) (aka integrin subunit al... | A |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: plaur (homo sapiens) (aka plasminogen activator, urokinase receptor)
B: plasminogen activator, urokinase (homo sapiens) (aka plasminogen activator, urokinase)
C: plau (rattus norvegicus) (aka plasminogen activator, urokinase)
D: plaa (homo sapiens) (aka phospholipase a2 activating protein)
E: plaa (mus mu... | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: upa (rattus norvegicus) (aka proline-rich acidic protein 1)
B: u-pa (mus musculus) (aka plasminogen activator, urokinase)
C: upa (homo sapiens) (proline rich acidic protein 1 (homo sapiens)) (aka proline rich acidic protein 1)
D: plasminogen activator, urokinase (rattus norvegicus) (aka plasminogen activa... | E |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: ptges2 (homo sapiens) (aka prostaglandin e synthase 2)
B: ptgs2 (rattus norvegicus) (aka prostaglandin-endoperoxide synthase 2)
C: ptgs2 (homo sapiens) (aka prostaglandin-endoperoxide synthase 2)
D: ptgs2os2 (mus musculus) (aka prostaglandin-endoperoxide synthase 2, opposite strand 2)
E: ptgs2 (mus muscul... | C |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: cox2 (homo sapiens) (mitochondrially encoded cytochrome c oxidase ii (homo sapiens)) (aka mitochondrially encoded cytochrome c oxidase ii)
B: cox2 (homo sapiens) (prostaglandin-endoperoxide synthase 2 (homo sapiens)) (aka prostaglandin-endoperoxide synthase 2)
C: cox-2 (rattus norvegicus) (aka prostagland... | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: cox2 (mus musculus) (prostaglandin-endoperoxide synthase 2 (mus musculus)) (aka prostaglandin-endoperoxide synthase 2)
B: cox2 (saccharomyces cerevisiae s288c) (aka cytochrome c oxidase subunit 2)
C: cox2 (mus musculus) (cytochrome c oxidase ii, mitochondrial (mus musculus)) (aka cytochrome c oxidase ii, ... | F |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: cxcl12 (homo sapiens) (aka c-x-c motif chemokine ligand 12)
B: cxcl1 (homo sapiens) (aka c-x-c motif chemokine ligand 1)
C: cxcl1 (mus musculus) (aka c-x-c motif chemokine ligand 1)
D: cxcl12 (mus musculus) (aka c-x-c motif chemokine ligand 12)
E: cxcl1 (rattus norvegicus) (aka c-x-c motif chemokine ligan... | B |
<Instruct>: Given the context 'The upregulated genes were NF-kappaB genes (NFKB1, RELA, IKBKG, NFKBIB, NFKB2, REL, CHUK), apoptosis genes (MCL1L, TNFAIP3/A20, GADD45B, FASLG, MCL1S, IER3L, TNFRSF10B/TRAILR2), immune response genes (CD40, CD48, TNFSF11/RANKL, TNFRSF11A/RANK, CCL2/MCP-1, CD40LG, IL15, GBP1), proliferatio... | <Options>: A: gro1 (danio rerio) (aka tle family member 3, transcriptional corepressor b)
B: cxcl1 (rattus norvegicus) (aka c-x-c motif chemokine ligand 1)
C: chemokine (c motif) ligand 1 (mus musculus) (aka chemokine (c motif) ligand 1)
D: cxcl1 (mus musculus) (aka c-x-c motif chemokine ligand 1)
E: gro1 (homo sapiens... | E |
<Instruct>: Given the context 'Only two of these 35 genes (PTGS2/COX2 and CXCL1/GRO1)were also upregulated in breast cancer metastases.', select the correct biomedical concept corresponding to 'ptgs2'. Answer using one of the provided options. | <Options>: A: ptgs2 (danio rerio) (aka prostaglandin-endoperoxide synthase 2a)
B: cox2 (homo sapiens) (prostaglandin-endoperoxide synthase 2 (homo sapiens)) (aka prostaglandin-endoperoxide synthase 2)
C: ptges2 (homo sapiens) (aka prostaglandin e synthase 2)
D: ptgs2os2 (mus musculus) (aka prostaglandin-endoperoxide sy... | B |
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