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  1. .gitattributes +51 -0
  2. 20260530_190536/nas_best.json +154 -0
  3. 20260530_190536/nas_log.csv +2 -0
  4. 20260530_190536/nas_top1.json +154 -0
  5. 20260530_190536/trial_000__arch.json +53 -0
  6. 20260530_190536/trial_000_s42/nxon2_430391171__BestFitness.json +0 -0
  7. 20260530_190536/trial_000_s42/nxon2_430391171__BestFoodFound.json +0 -0
  8. 20260530_190536/trial_000_s42/nxon2_430391171__BestFoodTaken.json +0 -0
  9. 20260530_190536/trial_000_s42/nxon2_430391171__BestMates.json +0 -0
  10. 20260530_190536/trial_000_s42/nxon2_430391171__BestTimeLived.json +0 -0
  11. 20260530_190536/trial_000_s42/nxon2_430391171__BestWorldExplorer.json +0 -0
  12. 20260530_190536/trial_000_s42/nxon2_430391171__KeyMetrics.txt +0 -0
  13. 20260530_190536/trial_000_s42/nxon2_430391171__LifespanLog.txt +61 -0
  14. 20260530_190536/trial_000_s42/nxon2_430391171__MembraneDiag.txt +0 -0
  15. 20260530_190536/trial_000_s52155/nxon2_457297843__KeyMetrics.txt +0 -0
  16. 20260530_190536/trial_001__arch.json +53 -0
  17. 20260530_190536/trial_001_s60074/nxon2_307046151__KeyMetrics.txt +0 -0
  18. 20260530_190536/trial_001_s7961/nxon2_024722855__BestFitness.json +0 -0
  19. 20260530_190536/trial_001_s7961/nxon2_024722855__BestFoodFound.json +0 -0
  20. 20260530_190536/trial_001_s7961/nxon2_024722855__BestFoodTaken.json +0 -0
  21. 20260530_190536/trial_001_s7961/nxon2_024722855__BestMates.json +0 -0
  22. 20260530_190536/trial_001_s7961/nxon2_024722855__BestTimeLived.json +0 -0
  23. 20260530_190536/trial_001_s7961/nxon2_024722855__BestWorldExplorer.json +0 -0
  24. 20260530_190536/trial_001_s7961/nxon2_024722855__KeyMetrics.txt +0 -0
  25. 20260530_190536/trial_001_s7961/nxon2_024722855__LifespanLog.txt +59 -0
  26. 20260530_190536/trial_001_s7961/nxon2_024722855__MembraneDiag.txt +0 -0
  27. 20260530_190536/trial_002__arch.json +53 -0
  28. 20260530_190536/trial_002_s15880/8051876568_nxon2_117492643_1_Completed_2026-05-31T00-12-31Z.json +3 -0
  29. 20260530_190536/trial_002_s15880/nxon2_117492643__BestFitness.json +0 -0
  30. 20260530_190536/trial_002_s15880/nxon2_117492643__BestFoodFound.json +0 -0
  31. 20260530_190536/trial_002_s15880/nxon2_117492643__BestFoodTaken.json +0 -0
  32. 20260530_190536/trial_002_s15880/nxon2_117492643__BestMates.json +0 -0
  33. 20260530_190536/trial_002_s15880/nxon2_117492643__BestTimeLived.json +0 -0
  34. 20260530_190536/trial_002_s15880/nxon2_117492643__BestWorldExplorer.json +0 -0
  35. 20260530_190536/trial_002_s15880/nxon2_117492643__KeyMetrics.txt +3 -0
  36. 20260530_190536/trial_002_s15880/nxon2_117492643__LifespanLog.txt +63 -0
  37. 20260530_190536/trial_002_s15880/nxon2_117492643__MembraneDiag.txt +0 -0
  38. 20260530_190536/trial_003__arch.json +53 -0
  39. 20260530_190536/trial_003_s23799/nxon2_729357211__BestFitness.json +0 -0
  40. 20260530_190536/trial_003_s23799/nxon2_729357211__BestFoodFound.json +0 -0
  41. 20260530_190536/trial_003_s23799/nxon2_729357211__BestFoodTaken.json +0 -0
  42. 20260530_190536/trial_003_s23799/nxon2_729357211__BestMates.json +0 -0
  43. 20260530_190536/trial_003_s23799/nxon2_729357211__BestTimeLived.json +0 -0
  44. 20260530_190536/trial_003_s23799/nxon2_729357211__BestWorldExplorer.json +0 -0
  45. 20260530_190536/trial_003_s23799/nxon2_729357211__KeyMetrics.txt +3 -0
  46. 20260530_190536/trial_003_s23799/nxon2_729357211__LifespanLog.txt +55 -0
  47. 20260530_190536/trial_003_s23799/nxon2_729357211__MembraneDiag.txt +0 -0
  48. 20260530_190536/trial_003_s75912/nxon2_148451755__KeyMetrics.txt +0 -0
  49. 20260530_190536/trial_004__arch.json +53 -0
  50. 20260530_190536/trial_004_s31718/nxon2_005929900__BestFitness.json +0 -0
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20260530_190536/nas_best.json ADDED
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1
+ {
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+ "_meta": {
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+ "name": "nas_best_t022",
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+ "version": "NxonArchNAS v1.2 (v193)",
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+ "description": "Architecture found by NAS \u2014 trial 22, fitness 5.3274. Plug-and-play compatible with architectures/default.json: drop this file into architectures/ or load with NEURAXON_ARCH=path/to/this.json python main.py",
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+ "source": "NxonArchNAS",
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+ "rank": 1,
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+ "trial_id": 22,
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+ "fitness": 5.327370186909156,
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+ "saved_at": "2026-05-31T05:23:27",
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+ "notes": [
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+ "Sections inherited from default.json: healthy_bands (unchanged target ranges)",
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+ "Sections overridden by NAS: biology, neural, operating_ranges, genetic_lottery",
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+ "Load with NEURAXON_ARCH=path/to/this.json python main.py"
15
+ ]
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+ },
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+ "biology": {
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+ "_doc": "Game-world / bio-inspired dynamics. Independent of neural architecture \u2014 change these to study survival pressure without touching the brain.",
19
+ "metabolic_ramp_per_sec": 17.390577635085386,
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+ "_doc_metabolic_ramp_per_sec": "Multiplier added to food drain and metabolic_rate per second of idle. With 1s idle \u2192 factor (1 + 10*1) = 11\u00d7. Capped by max_atrophy.",
21
+ "max_atrophy": 12.785441287733448,
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+ "_doc_max_atrophy": "Hard cap on the atrophy multiplier (v151 fix). 5.0 = max 5\u00d7 normal drain even after extended idle.",
23
+ "metabolic_rate_abs_cap_multiple": 37.91035367943638,
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+ "_doc_metabolic_rate_abs_cap_multiple": "Absolute ceiling on the per-NxEr metabolic_rate, expressed as a multiple of the initial value (v153 F-1).",
25
+ "start_food_default": 25.0,
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+ "food_respawn_default": 400,
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+ "food_sources_default": 50,
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+ "_doc_food": "Defaults if the user doesn't change them via the menu sliders. The menu still overrides at startup.",
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+ "mate_cooldown_seconds": 16,
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+ "circadian_cycle_ticks": 1141,
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+ "idle_explore_seconds": 2.3917298111739753,
32
+ "explore_probability": 0.7997434501264709,
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+ "_doc_idle_explore": "v152 idle-exploration safety net. If an NxEr has been idle \u2265 idle_explore_seconds, with explore_probability per tick, override motor output with a random direction."
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+ },
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+ "neural": {
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+ "_doc": "Network architecture (topology + per-neuron parameters). Change these to test different brain configurations.",
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+ "num_input_neurons": 10,
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+ "num_output_neurons": 7,
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+ "num_hidden_neurons_default": 14,
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+ "_doc_neuron_counts": "Inputs: 10 sensory channels (movement, encounter, terrain, hunger, sight, smell, daynight, temp, proprio, song). Outputs: 7 motor (MoveX, MoveY, Social, MateIntent, GiveFood, Resting, Sing).",
41
+ "connection_probability": 0.32287409538082407,
42
+ "afferent_synapse_strength": 1.5157308050060467,
43
+ "proprioceptive_afferent_gain": 1.8,
44
+ "sensory_input_gain": 0.9,
45
+ "firing_threshold_excitatory": 0.4525572183813918,
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+ "firing_threshold_inhibitory": -0.5443108477037188,
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+ "spontaneous_firing_rate": 0.017039908842569076,
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+ "intrinsic_timescale_default": 14.11944459373326,
49
+ "resting_potential_decay": 0.34923636873314085,
50
+ "sensorimotor_coupling": 1.3076549612310093,
51
+ "_doc_sensorimotor_coupling": "v164 \u2014 multiplier on input\u2192output direct-edge probability. 0.0 = pre-v164 (uniform random links). 1.0 = 2x more sensory\u2192motor connections. 3.0 = 4x. The fitness component sensory_motor_corr was stuck near zero in 1425 v163 trials because there was no architectural bias for sensory pathways. Boost this and plasticity will amplify the correlations.",
52
+ "symmetric_stdp": true,
53
+ "_doc_symmetric_stdp": "v169 (v4.77) \u2014 opt-in for MultiNeuraxon2 Bug #3 fix. False (default) preserves v161-v168 asymmetric STDP where state==-1 is invisible to plasticity (only +1-driven correlations strengthen synapses). True enables signed STDP traces + symmetric (-1,-1) \u2192 LTP and (-1,+1) \u2192 LTD branches. Hypothesised to address the input saturation root cause we worked around with sm_corr_peak in v165. NAS will A/B test it.",
54
+ "refractory_period_ticks": 0,
55
+ "_doc_refractory_period_ticks": "v171 (v4.79) \u2014 number of ticks a neuron is FORCED to state=0 after each firing event (0\u2192\u00b11 transition). 0 = no refractory (v161-v170 behaviour). The v170 @2400s membrane diagnostics showed only 0.6% of samples at state=0 \u2014 the network had become a bistable +1/-1 oscillator with no rest band. The paper's trinary firing model REQUIRES a meaningful 0 state. This parameter restores it. NAS searches 0-12 ticks; biologically realistic values are 1-5 (~ 1-5 game ticks at 10Hz). The membrane potential continues to evolve during refractory so the neuron can fire again immediately after the buffer expires.",
56
+ "post_spike_mp_reset": 0.23500519748017584,
57
+ "_doc_post_spike_mp_reset": "v172 (v4.80) \u2014 after-hyperpolarization (AHP). Fraction by which membrane_potential is pulled toward 0 after each firing event (0\u2192\u00b11). 0.0 = no reset (v171 behaviour). 1.0 = full reset to mp=0. Combined with refractory_period_ticks, restores the paper's intended trinary dynamics: refractory holds state=0 for N ticks while mp drops back to rest band, then state stays at 0 NATURALLY until inputs push mp past threshold again (rather than immediately re-firing). v171 found refract=1 alone only achieved 0.3% state=0 because mp stayed saturated past threshold; this parameter fixes that by snapping mp back to the rest band. NAS searches 0.0-1.0.",
58
+ "_doc_thresholds": "Membrane firing thresholds (above which trinary_state = +1, below -threshold = -1). The membrane potential is a low-pass filter with intrinsic_timescale ticks. resting_potential_decay multiplies mp by (1-this) each tick before the membrane equation update.",
59
+ "sphere_topology": "chc6",
60
+ "cross_sphere_coupling": 2.4406981042139178,
61
+ "cryst_capacity": 1.6001932179435658,
62
+ "free_energy_beta": 1.07320404462294
63
+ },
64
+ "operating_ranges": {
65
+ "_doc": "Plasticity / adaptation / brake tunables. Change these to test different learning dynamics.",
66
+ "learning_rate": 0.007445195958678058,
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+ "plasticity_threshold": 0.4284233023826286,
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+ "adaptation_tau_ticks": 16.43299410635342,
69
+ "adaptation_target_excitatory_multiplier": 1.2939741077453524,
70
+ "adaptation_target_inhibitory_multiplier": 1.3945628251572053,
71
+ "_doc_adaptation": "v149: adapt builds toward 0.55 \u00d7 multiplier when firing. Tau=20 ticks. Excitatory uses 1.5\u00d7 to bias the brake against +1 dominance.",
72
+ "autoreceptor_coefficient": 0.07091997691651149,
73
+ "autoreceptor_tau_ticks": 150.0,
74
+ "autoreceptor_rate_coeff": 0.35,
75
+ "_doc_autoreceptor": "Per-neuron autoreceptor that subtracts from theta1_eff (v154 sign back to v152 form \u2014 see CHANGELOG_v154 for context).",
76
+ "sensory_boost_function": "tanh",
77
+ "sensory_boost_scale": 1.0,
78
+ "_doc_sensory_boost": "v152 saturating cap: boosted_external = scale * tanh(scale * external_input). Asymptote = scale. 1.0 keeps strong inputs near threshold; lowering compresses further.",
79
+ "plasticity_brake_threshold": 0.5,
80
+ "plasticity_brake_slope": 1.8,
81
+ "plasticity_brake_floor": 0.1,
82
+ "_doc_plasticity_brake": "v152: when input_saturation_fraction > brake_threshold, learning_rate_mod is multiplied by max(floor, 1 - slope*(sat-threshold)).",
83
+ "fitness_g_weight": 1.5
84
+ },
85
+ "genetic_lottery": {
86
+ "_doc": "v162 \u2014 per-NxEr trait variation at birth. Each NxEr samples its own value from these ranges, creating the genetic diversity that selection acts on (the missing ingredient that kept M10 heritability at 0 across all 743 v161 NAS trials). Inheritance + mutation at mating carries traits across generations.",
87
+ "metabolic_rate_multiplier_range": [
88
+ 0.7100810050095587,
89
+ 1.2278005824517972
90
+ ],
91
+ "_doc_metabolic_rate_multiplier_range": "At birth each NxEr samples a multiplier uniformly from this range and applies it to its base metabolic_rate. [0.85, 1.15] means \u00b115% variation. Wider = more diversity but also more individuals at survival extremes.",
92
+ "intrinsic_timescale_jitter": 7.761477814468617,
93
+ "_doc_intrinsic_timescale_jitter": "At birth each NxEr adds a uniform random value in [-jitter, +jitter] to intrinsic_timescale_default. 0.0 = no per-NxEr variation (all neurons in all NxErs have same timescale).",
94
+ "firing_threshold_jitter": 0.06062625855011184,
95
+ "_doc_firing_threshold_jitter": "Same idea for firing_threshold_excitatory / inhibitory. 0.04 = \u00b10.04 around the architecture default of 0.55. 0.0 = no per-NxEr variation.",
96
+ "mutation_strength": 0.08689751280278367,
97
+ "_doc_mutation_strength": "When offspring inherit a genetic trait from a parent, the value is perturbed by \u00b1mutation_strength \u00d7 (parent_value). 0.05 = 5% perturbation. 0 = exact copy."
98
+ },
99
+ "healthy_bands": {
100
+ "_doc": "Target ranges shown on the dashboard. NxErs operating in these bands are coloured green.",
101
+ "M1_excitatory_fraction": [
102
+ 0.18,
103
+ 0.28
104
+ ],
105
+ "M2_mean_gate": [
106
+ 0.4,
107
+ 0.85
108
+ ],
109
+ "M3_pac_modulation_idx": [
110
+ 0.005,
111
+ 0.1
112
+ ],
113
+ "M5_branching_ratio": [
114
+ 0.92,
115
+ 1.1
116
+ ],
117
+ "M6_spontaneous_fraction": [
118
+ 0.1,
119
+ 0.45
120
+ ],
121
+ "M7_zero_input_mi_ratio": [
122
+ 0.4,
123
+ 1.2
124
+ ],
125
+ "M9_transfer_ratio": [
126
+ 0.85,
127
+ 1.3
128
+ ],
129
+ "M10_heritability_r": [
130
+ 0.2,
131
+ 1.0
132
+ ],
133
+ "sensory_motor_corr": [
134
+ 0.2,
135
+ 1.0
136
+ ],
137
+ "pop_mean_idle_seconds": [
138
+ 0.0,
139
+ 1.5
140
+ ],
141
+ "input_saturation_fraction": [
142
+ 0.0,
143
+ 0.3
144
+ ],
145
+ "input_locked_fraction": [
146
+ 0.0,
147
+ 0.2
148
+ ],
149
+ "exploration_trigger_rate": [
150
+ 0.01,
151
+ 0.4
152
+ ]
153
+ }
154
+ }
20260530_190536/nas_log.csv ADDED
@@ -0,0 +1,2 @@
 
 
 
1
+ trial_id,completed_at_iso,fitness,final_alive,peak_alive,alive_q1,alive_q2,alive_q3,alive_mean,M1,M1_neutral,M1_inh,M2,M3,M5,M7,input_sat,band_complete,M6,M9,M10,M10_peak,mean_streak_last,mean_streak_first,locked,surv_score,expl_rate,sm_corr,sm_corr_peak,sm_corr_mean,g_pc1,g_pc1_peak,g_posman,g_meanr,g_l1l2,n_samples,wall_actual_s,error,total_rounds,went_extinct,extinction_tick,min_alive,peak_alive_trimmed,mean_alive_ever,n_repeats,n_repeats_ok,M1_std,fitness_std_reps,arch_summary,is_global_best
2
+ 22,2026-05-31T05:23:27,5.3274,1.0,31.0,1.0,1.0,1.0,8.57,0.3077,0.0000,0.6154,0.8138,0.3352,1.0000,0.5561,1.0000,0.6424,0.0236,1.0038,0.1100,0.1100,2.46,2.46,1.0000,0.1606,0.0293,0.0000,0.0000,0.0000,0.0000,0.0000,0.0000,0.0000,0.0000,27918,37070.2,,1,0,-1,1.0,1.0,8.570,3,3,0.1581,0.1746,"metabolic_ramp_per_sec=17.391 max_atrophy=12.785 metabolic_rate_abs_cap_multiple=37.91 idle_explore_seconds=2.392 explore_probability=0.79974 mate_cooldown_seconds=16 circadian_cycle_ticks=1141 num_hidden_neurons_default=14 connection_probability=0.32287 afferent_synapse_strength=1.516 firing_threshold_excitatory=0.45256 firing_threshold_inhibitory=-0.54431 spontaneous_firing_rate=0.01704 intrinsic_timescale_default=14.119 resting_potential_decay=0.34924 sensorimotor_coupling=1.308 symmetric_stdp=True refractory_period_ticks=0 post_spike_mp_reset=0.23501 sphere_topology=chc6 cross_sphere_coupling=2.441 cryst_capacity=1.6 free_energy_beta=1.073 learning_rate=0.00745 plasticity_threshold=0.42842 autoreceptor_coefficient=0.07092 adaptation_tau_ticks=16.433 adaptation_target_excitatory_multiplier=1.294 adaptation_target_inhibitory_multiplier=1.395 fitness_g_weight=1.5 intrinsic_timescale_jitter=7.761 firing_threshold_jitter=0.06063 mutation_strength=0.0869 metabolic_rate_multiplier_range=[0.7100810050095587, 1.2278005824517972]",1
20260530_190536/nas_top1.json ADDED
@@ -0,0 +1,154 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "_meta": {
3
+ "name": "nas_best_t022",
4
+ "version": "NxonArchNAS v1.2 (v193)",
5
+ "description": "Architecture found by NAS \u2014 trial 22, fitness 5.3274. Plug-and-play compatible with architectures/default.json: drop this file into architectures/ or load with NEURAXON_ARCH=path/to/this.json python main.py",
6
+ "source": "NxonArchNAS",
7
+ "rank": 1,
8
+ "trial_id": 22,
9
+ "fitness": 5.327370186909156,
10
+ "saved_at": "2026-05-31T05:23:27",
11
+ "notes": [
12
+ "Sections inherited from default.json: healthy_bands (unchanged target ranges)",
13
+ "Sections overridden by NAS: biology, neural, operating_ranges, genetic_lottery",
14
+ "Load with NEURAXON_ARCH=path/to/this.json python main.py"
15
+ ]
16
+ },
17
+ "biology": {
18
+ "_doc": "Game-world / bio-inspired dynamics. Independent of neural architecture \u2014 change these to study survival pressure without touching the brain.",
19
+ "metabolic_ramp_per_sec": 17.390577635085386,
20
+ "_doc_metabolic_ramp_per_sec": "Multiplier added to food drain and metabolic_rate per second of idle. With 1s idle \u2192 factor (1 + 10*1) = 11\u00d7. Capped by max_atrophy.",
21
+ "max_atrophy": 12.785441287733448,
22
+ "_doc_max_atrophy": "Hard cap on the atrophy multiplier (v151 fix). 5.0 = max 5\u00d7 normal drain even after extended idle.",
23
+ "metabolic_rate_abs_cap_multiple": 37.91035367943638,
24
+ "_doc_metabolic_rate_abs_cap_multiple": "Absolute ceiling on the per-NxEr metabolic_rate, expressed as a multiple of the initial value (v153 F-1).",
25
+ "start_food_default": 25.0,
26
+ "food_respawn_default": 400,
27
+ "food_sources_default": 50,
28
+ "_doc_food": "Defaults if the user doesn't change them via the menu sliders. The menu still overrides at startup.",
29
+ "mate_cooldown_seconds": 16,
30
+ "circadian_cycle_ticks": 1141,
31
+ "idle_explore_seconds": 2.3917298111739753,
32
+ "explore_probability": 0.7997434501264709,
33
+ "_doc_idle_explore": "v152 idle-exploration safety net. If an NxEr has been idle \u2265 idle_explore_seconds, with explore_probability per tick, override motor output with a random direction."
34
+ },
35
+ "neural": {
36
+ "_doc": "Network architecture (topology + per-neuron parameters). Change these to test different brain configurations.",
37
+ "num_input_neurons": 10,
38
+ "num_output_neurons": 7,
39
+ "num_hidden_neurons_default": 14,
40
+ "_doc_neuron_counts": "Inputs: 10 sensory channels (movement, encounter, terrain, hunger, sight, smell, daynight, temp, proprio, song). Outputs: 7 motor (MoveX, MoveY, Social, MateIntent, GiveFood, Resting, Sing).",
41
+ "connection_probability": 0.32287409538082407,
42
+ "afferent_synapse_strength": 1.5157308050060467,
43
+ "proprioceptive_afferent_gain": 1.8,
44
+ "sensory_input_gain": 0.9,
45
+ "firing_threshold_excitatory": 0.4525572183813918,
46
+ "firing_threshold_inhibitory": -0.5443108477037188,
47
+ "spontaneous_firing_rate": 0.017039908842569076,
48
+ "intrinsic_timescale_default": 14.11944459373326,
49
+ "resting_potential_decay": 0.34923636873314085,
50
+ "sensorimotor_coupling": 1.3076549612310093,
51
+ "_doc_sensorimotor_coupling": "v164 \u2014 multiplier on input\u2192output direct-edge probability. 0.0 = pre-v164 (uniform random links). 1.0 = 2x more sensory\u2192motor connections. 3.0 = 4x. The fitness component sensory_motor_corr was stuck near zero in 1425 v163 trials because there was no architectural bias for sensory pathways. Boost this and plasticity will amplify the correlations.",
52
+ "symmetric_stdp": true,
53
+ "_doc_symmetric_stdp": "v169 (v4.77) \u2014 opt-in for MultiNeuraxon2 Bug #3 fix. False (default) preserves v161-v168 asymmetric STDP where state==-1 is invisible to plasticity (only +1-driven correlations strengthen synapses). True enables signed STDP traces + symmetric (-1,-1) \u2192 LTP and (-1,+1) \u2192 LTD branches. Hypothesised to address the input saturation root cause we worked around with sm_corr_peak in v165. NAS will A/B test it.",
54
+ "refractory_period_ticks": 0,
55
+ "_doc_refractory_period_ticks": "v171 (v4.79) \u2014 number of ticks a neuron is FORCED to state=0 after each firing event (0\u2192\u00b11 transition). 0 = no refractory (v161-v170 behaviour). The v170 @2400s membrane diagnostics showed only 0.6% of samples at state=0 \u2014 the network had become a bistable +1/-1 oscillator with no rest band. The paper's trinary firing model REQUIRES a meaningful 0 state. This parameter restores it. NAS searches 0-12 ticks; biologically realistic values are 1-5 (~ 1-5 game ticks at 10Hz). The membrane potential continues to evolve during refractory so the neuron can fire again immediately after the buffer expires.",
56
+ "post_spike_mp_reset": 0.23500519748017584,
57
+ "_doc_post_spike_mp_reset": "v172 (v4.80) \u2014 after-hyperpolarization (AHP). Fraction by which membrane_potential is pulled toward 0 after each firing event (0\u2192\u00b11). 0.0 = no reset (v171 behaviour). 1.0 = full reset to mp=0. Combined with refractory_period_ticks, restores the paper's intended trinary dynamics: refractory holds state=0 for N ticks while mp drops back to rest band, then state stays at 0 NATURALLY until inputs push mp past threshold again (rather than immediately re-firing). v171 found refract=1 alone only achieved 0.3% state=0 because mp stayed saturated past threshold; this parameter fixes that by snapping mp back to the rest band. NAS searches 0.0-1.0.",
58
+ "_doc_thresholds": "Membrane firing thresholds (above which trinary_state = +1, below -threshold = -1). The membrane potential is a low-pass filter with intrinsic_timescale ticks. resting_potential_decay multiplies mp by (1-this) each tick before the membrane equation update.",
59
+ "sphere_topology": "chc6",
60
+ "cross_sphere_coupling": 2.4406981042139178,
61
+ "cryst_capacity": 1.6001932179435658,
62
+ "free_energy_beta": 1.07320404462294
63
+ },
64
+ "operating_ranges": {
65
+ "_doc": "Plasticity / adaptation / brake tunables. Change these to test different learning dynamics.",
66
+ "learning_rate": 0.007445195958678058,
67
+ "plasticity_threshold": 0.4284233023826286,
68
+ "adaptation_tau_ticks": 16.43299410635342,
69
+ "adaptation_target_excitatory_multiplier": 1.2939741077453524,
70
+ "adaptation_target_inhibitory_multiplier": 1.3945628251572053,
71
+ "_doc_adaptation": "v149: adapt builds toward 0.55 \u00d7 multiplier when firing. Tau=20 ticks. Excitatory uses 1.5\u00d7 to bias the brake against +1 dominance.",
72
+ "autoreceptor_coefficient": 0.07091997691651149,
73
+ "autoreceptor_tau_ticks": 150.0,
74
+ "autoreceptor_rate_coeff": 0.35,
75
+ "_doc_autoreceptor": "Per-neuron autoreceptor that subtracts from theta1_eff (v154 sign back to v152 form \u2014 see CHANGELOG_v154 for context).",
76
+ "sensory_boost_function": "tanh",
77
+ "sensory_boost_scale": 1.0,
78
+ "_doc_sensory_boost": "v152 saturating cap: boosted_external = scale * tanh(scale * external_input). Asymptote = scale. 1.0 keeps strong inputs near threshold; lowering compresses further.",
79
+ "plasticity_brake_threshold": 0.5,
80
+ "plasticity_brake_slope": 1.8,
81
+ "plasticity_brake_floor": 0.1,
82
+ "_doc_plasticity_brake": "v152: when input_saturation_fraction > brake_threshold, learning_rate_mod is multiplied by max(floor, 1 - slope*(sat-threshold)).",
83
+ "fitness_g_weight": 1.5
84
+ },
85
+ "genetic_lottery": {
86
+ "_doc": "v162 \u2014 per-NxEr trait variation at birth. Each NxEr samples its own value from these ranges, creating the genetic diversity that selection acts on (the missing ingredient that kept M10 heritability at 0 across all 743 v161 NAS trials). Inheritance + mutation at mating carries traits across generations.",
87
+ "metabolic_rate_multiplier_range": [
88
+ 0.7100810050095587,
89
+ 1.2278005824517972
90
+ ],
91
+ "_doc_metabolic_rate_multiplier_range": "At birth each NxEr samples a multiplier uniformly from this range and applies it to its base metabolic_rate. [0.85, 1.15] means \u00b115% variation. Wider = more diversity but also more individuals at survival extremes.",
92
+ "intrinsic_timescale_jitter": 7.761477814468617,
93
+ "_doc_intrinsic_timescale_jitter": "At birth each NxEr adds a uniform random value in [-jitter, +jitter] to intrinsic_timescale_default. 0.0 = no per-NxEr variation (all neurons in all NxErs have same timescale).",
94
+ "firing_threshold_jitter": 0.06062625855011184,
95
+ "_doc_firing_threshold_jitter": "Same idea for firing_threshold_excitatory / inhibitory. 0.04 = \u00b10.04 around the architecture default of 0.55. 0.0 = no per-NxEr variation.",
96
+ "mutation_strength": 0.08689751280278367,
97
+ "_doc_mutation_strength": "When offspring inherit a genetic trait from a parent, the value is perturbed by \u00b1mutation_strength \u00d7 (parent_value). 0.05 = 5% perturbation. 0 = exact copy."
98
+ },
99
+ "healthy_bands": {
100
+ "_doc": "Target ranges shown on the dashboard. NxErs operating in these bands are coloured green.",
101
+ "M1_excitatory_fraction": [
102
+ 0.18,
103
+ 0.28
104
+ ],
105
+ "M2_mean_gate": [
106
+ 0.4,
107
+ 0.85
108
+ ],
109
+ "M3_pac_modulation_idx": [
110
+ 0.005,
111
+ 0.1
112
+ ],
113
+ "M5_branching_ratio": [
114
+ 0.92,
115
+ 1.1
116
+ ],
117
+ "M6_spontaneous_fraction": [
118
+ 0.1,
119
+ 0.45
120
+ ],
121
+ "M7_zero_input_mi_ratio": [
122
+ 0.4,
123
+ 1.2
124
+ ],
125
+ "M9_transfer_ratio": [
126
+ 0.85,
127
+ 1.3
128
+ ],
129
+ "M10_heritability_r": [
130
+ 0.2,
131
+ 1.0
132
+ ],
133
+ "sensory_motor_corr": [
134
+ 0.2,
135
+ 1.0
136
+ ],
137
+ "pop_mean_idle_seconds": [
138
+ 0.0,
139
+ 1.5
140
+ ],
141
+ "input_saturation_fraction": [
142
+ 0.0,
143
+ 0.3
144
+ ],
145
+ "input_locked_fraction": [
146
+ 0.0,
147
+ 0.2
148
+ ],
149
+ "exploration_trigger_rate": [
150
+ 0.01,
151
+ 0.4
152
+ ]
153
+ }
154
+ }
20260530_190536/trial_000__arch.json ADDED
@@ -0,0 +1,53 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ {
2
+ "_meta": {
3
+ "source": "NxonArchNAS",
4
+ "trial_id": 0,
5
+ "sampled_at": "2026-05-30T19:05:36"
6
+ },
7
+ "biology": {
8
+ "metabolic_ramp_per_sec": 12.23082877532614,
9
+ "max_atrophy": 1.8376451955060036,
10
+ "metabolic_rate_abs_cap_multiple": 22.301524555194202,
11
+ "idle_explore_seconds": 0.79106362392741,
12
+ "explore_probability": 0.6418827284984074,
13
+ "mate_cooldown_seconds": 16,
14
+ "circadian_cycle_ticks": 1058
15
+ },
16
+ "neural": {
17
+ "num_hidden_neurons_default": 23,
18
+ "connection_probability": 0.17608164978882485,
19
+ "afferent_synapse_strength": 1.1063061836223245,
20
+ "firing_threshold_excitatory": 0.40893916583142115,
21
+ "firing_threshold_inhibitory": -0.6344086075589189,
22
+ "spontaneous_firing_rate": 0.02029917581452286,
23
+ "intrinsic_timescale_default": 8.583791333045,
24
+ "resting_potential_decay": 0.14970941267166213,
25
+ "sensorimotor_coupling": 1.9496533133385696,
26
+ "symmetric_stdp": true,
27
+ "refractory_period_ticks": 1,
28
+ "post_spike_mp_reset": 0.2246045231419268,
29
+ "sphere_topology": "chc6",
30
+ "cross_sphere_coupling": 2.8716392166203435,
31
+ "cryst_capacity": 1.1731890902252535,
32
+ "free_energy_beta": 0.4576679337462514
33
+ },
34
+ "operating_ranges": {
35
+ "learning_rate": 0.00489693023424257,
36
+ "plasticity_threshold": 0.6477201283171735,
37
+ "autoreceptor_coefficient": 0.20176147342595346,
38
+ "adaptation_tau_ticks": 16.386372655075604,
39
+ "adaptation_target_excitatory_multiplier": 1.3071372777842032,
40
+ "adaptation_target_inhibitory_multiplier": 1.1334456100059702,
41
+ "fitness_g_weight": 1.5
42
+ },
43
+ "healthy_bands": {},
44
+ "genetic_lottery": {
45
+ "intrinsic_timescale_jitter": 4.8298082509351286,
46
+ "firing_threshold_jitter": 0.12106924099115703,
47
+ "mutation_strength": 0.11486513227019633,
48
+ "metabolic_rate_multiplier_range": [
49
+ 0.6338507318917124,
50
+ 1.516121901491103
51
+ ]
52
+ }
53
+ }
20260530_190536/trial_000_s42/nxon2_430391171__BestFitness.json ADDED
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20260530_190536/trial_000_s42/nxon2_430391171__BestFoodFound.json ADDED
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20260530_190536/trial_000_s42/nxon2_430391171__BestFoodTaken.json ADDED
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20260530_190536/trial_000_s42/nxon2_430391171__BestMates.json ADDED
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20260530_190536/trial_000_s42/nxon2_430391171__BestTimeLived.json ADDED
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20260530_190536/trial_000_s42/nxon2_430391171__BestWorldExplorer.json ADDED
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20260530_190536/trial_000_s42/nxon2_430391171__KeyMetrics.txt ADDED
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20260530_190536/trial_000_s42/nxon2_430391171__LifespanLog.txt ADDED
@@ -0,0 +1,61 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # Neuraxon Game of Life v5.08 — Per-NxEr lifespan log
2
+ # game_id=nxon2_430391171
3
+ # deaths=47 survivors_listed=7
4
+ # founders_at_start=30
5
+ # founders_still_alive_at_export=5
6
+ # format: tab-separated, header row. status=DIED|ALIVE; ALIVE rows have death_tick=-1 and age_ticks = ticks lived so far.
7
+ nxer_id birth_tick death_tick age_ticks was_original status
8
+ 6 1 594 593 1 DIED
9
+ 4 1 621 620 1 DIED
10
+ 35 404 845 441 0 DIED
11
+ 20 1 1046 1045 1 DIED
12
+ 36 421 1172 751 0 DIED
13
+ 22 1 1244 1243 1 DIED
14
+ 12 1 1372 1371 1 DIED
15
+ 28 1 1555 1554 1 DIED
16
+ 10 1 1682 1681 1 DIED
17
+ 13 1 1734 1733 1 DIED
18
+ 34 261 1833 1572 0 DIED
19
+ 43 1638 1954 316 0 DIED
20
+ 31 226 2378 2152 0 DIED
21
+ 26 1 2390 2389 1 DIED
22
+ 0 1 2480 2479 1 DIED
23
+ 3 1 2502 2501 1 DIED
24
+ 47 2106 2622 516 0 DIED
25
+ 42 1552 2642 1090 0 DIED
26
+ 48 2248 2734 486 0 DIED
27
+ 33 240 2814 2574 0 DIED
28
+ 39 1118 2901 1783 0 DIED
29
+ 49 2698 3324 626 0 DIED
30
+ 15 1 3360 3359 1 DIED
31
+ 9 1 3394 3393 1 DIED
32
+ 46 1777 3401 1624 0 DIED
33
+ 7 1 3446 3445 1 DIED
34
+ 40 1440 3661 2221 0 DIED
35
+ 44 1643 4085 2442 0 DIED
36
+ 32 227 4227 4000 0 DIED
37
+ 29 1 4247 4246 1 DIED
38
+ 30 56 4260 4204 0 DIED
39
+ 27 1 5497 5496 1 DIED
40
+ 50 3138 5737 2599 0 DIED
41
+ 45 1678 5968 4290 0 DIED
42
+ 11 1 6047 6046 1 DIED
43
+ 8 1 6262 6261 1 DIED
44
+ 52 4040 6350 2310 0 DIED
45
+ 53 5558 6410 852 0 DIED
46
+ 18 1 7208 7207 1 DIED
47
+ 21 1 10162 10161 1 DIED
48
+ 14 1 11733 11732 1 DIED
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+ 25 1 13764 13763 1 DIED
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+ 21 1 25451 25450 1 DIED
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+ 7 1 -1 59203 1 ALIVE
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+ 11 1 -1 59203 1 ALIVE
20260530_190536/trial_003_s23799/nxon2_729357211__MembraneDiag.txt ADDED
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20260530_190536/trial_003_s75912/nxon2_148451755__KeyMetrics.txt ADDED
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20260530_190536/trial_004__arch.json ADDED
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20260530_190536/trial_004_s31718/nxon2_005929900__BestFitness.json ADDED
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