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20260517_093026/nas_best.json

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+{
+  "_meta": {
+    "name": "nas_best_t026",
+    "version": "NxonArchNAS v0.4 (v162)",
+    "description": "Architecture found by NAS \u2014 trial 26, fitness 6.6655. Plug-and-play compatible with architectures/default.json: drop this file into architectures/ or load with NEURAXON_ARCH=path/to/this.json python main.py",
+    "source": "NxonArchNAS",
+    "rank": 1,
+    "trial_id": 26,
+    "fitness": 6.665529054794548,
+    "saved_at": "2026-05-17T10:00:33",
+    "notes": [
+      "Sections inherited from default.json:  healthy_bands (unchanged target ranges)",
+      "Sections overridden by NAS:  biology, neural, operating_ranges, genetic_lottery",
+      "Load with NEURAXON_ARCH=path/to/this.json python main.py"
+    ]
+  },
+  "biology": {
+    "_doc": "Game-world / bio-inspired dynamics. Independent of neural architecture \u2014 change these to study survival pressure without touching the brain.",
+    "metabolic_ramp_per_sec": 11.391003558626577,
+    "_doc_metabolic_ramp_per_sec": "Multiplier added to food drain and metabolic_rate per second of idle. With 1s idle \u2192 factor (1 + 10*1) = 11\u00d7. Capped by max_atrophy.",
+    "max_atrophy": 14.985181498596074,
+    "_doc_max_atrophy": "Hard cap on the atrophy multiplier (v151 fix). 5.0 = max 5\u00d7 normal drain even after extended idle.",
+    "metabolic_rate_abs_cap_multiple": 33.46129802609645,
+    "_doc_metabolic_rate_abs_cap_multiple": "Absolute ceiling on the per-NxEr metabolic_rate, expressed as a multiple of the initial value (v153 F-1).",
+    "start_food_default": 25.0,
+    "food_respawn_default": 400,
+    "food_sources_default": 50,
+    "_doc_food": "Defaults if the user doesn't change them via the menu sliders. The menu still overrides at startup.",
+    "mate_cooldown_seconds": 11,
+    "circadian_cycle_ticks": 640,
+    "idle_explore_seconds": 0.626909920442136,
+    "explore_probability": 0.5231483466223243,
+    "_doc_idle_explore": "v152 idle-exploration safety net. If an NxEr has been idle \u2265 idle_explore_seconds, with explore_probability per tick, override motor output with a random direction."
+  },
+  "neural": {
+    "_doc": "Network architecture (topology + per-neuron parameters). Change these to test different brain configurations.",
+    "num_input_neurons": 10,
+    "num_output_neurons": 7,
+    "num_hidden_neurons_default": 23,
+    "_doc_neuron_counts": "Inputs: 10 sensory channels (movement, encounter, terrain, hunger, sight, smell, daynight, temp, proprio, song). Outputs: 7 motor (MoveX, MoveY, Social, MateIntent, GiveFood, Resting, Sing).",
+    "connection_probability": 0.37886180328599384,
+    "afferent_synapse_strength": 1.0526520650566633,
+    "proprioceptive_afferent_gain": 1.8,
+    "sensory_input_gain": 0.9,
+    "firing_threshold_excitatory": 0.6798556767145782,
+    "firing_threshold_inhibitory": -0.55,
+    "spontaneous_firing_rate": 0.055728168220012475,
+    "intrinsic_timescale_default": 29.577041889317076,
+    "resting_potential_decay": 0.15970138604156234,
+    "sensorimotor_coupling": 1.1489125467888066,
+    "_doc_sensorimotor_coupling": "v164 \u2014 multiplier on input\u2192output direct-edge probability. 0.0 = pre-v164 (uniform random links). 1.0 = 2x more sensory\u2192motor connections. 3.0 = 4x. The fitness component sensory_motor_corr was stuck near zero in 1425 v163 trials because there was no architectural bias for sensory pathways. Boost this and plasticity will amplify the correlations.",
+    "symmetric_stdp": true,
+    "_doc_symmetric_stdp": "v169 (v4.77) \u2014 opt-in for MultiNeuraxon2 Bug #3 fix. False (default) preserves v161-v168 asymmetric STDP where state==-1 is invisible to plasticity (only +1-driven correlations strengthen synapses). True enables signed STDP traces + symmetric (-1,-1) \u2192 LTP and (-1,+1) \u2192 LTD branches. Hypothesised to address the input saturation root cause we worked around with sm_corr_peak in v165. NAS will A/B test it.",
+    "refractory_period_ticks": 0,
+    "_doc_refractory_period_ticks": "v171 (v4.79) \u2014 number of ticks a neuron is FORCED to state=0 after each firing event (0\u2192\u00b11 transition). 0 = no refractory (v161-v170 behaviour). The v170 @2400s membrane diagnostics showed only 0.6% of samples at state=0 \u2014 the network had become a bistable +1/-1 oscillator with no rest band. The paper's trinary firing model REQUIRES a meaningful 0 state. This parameter restores it. NAS searches 0-12 ticks; biologically realistic values are 1-5 (~ 1-5 game ticks at 10Hz). The membrane potential continues to evolve during refractory so the neuron can fire again immediately after the buffer expires.",
+    "post_spike_mp_reset": 0.31817632723379985,
+    "_doc_post_spike_mp_reset": "v172 (v4.80) \u2014 after-hyperpolarization (AHP). Fraction by which membrane_potential is pulled toward 0 after each firing event (0\u2192\u00b11). 0.0 = no reset (v171 behaviour). 1.0 = full reset to mp=0. Combined with refractory_period_ticks, restores the paper's intended trinary dynamics: refractory holds state=0 for N ticks while mp drops back to rest band, then state stays at 0 NATURALLY until inputs push mp past threshold again (rather than immediately re-firing). v171 found refract=1 alone only achieved 0.3% state=0 because mp stayed saturated past threshold; this parameter fixes that by snapping mp back to the rest band. NAS searches 0.0-1.0.",
+    "_doc_thresholds": "Membrane firing thresholds (above which trinary_state = +1, below -threshold = -1). The membrane potential is a low-pass filter with intrinsic_timescale ticks. resting_potential_decay multiplies mp by (1-this) each tick before the membrane equation update.",
+    "sphere_topology": "sensory_association_motor",
+    "cross_sphere_coupling": 1.4859859488492706,
+    "cryst_capacity": 0.5740392226911524,
+    "free_energy_beta": 1.153894955226042
+  },
+  "operating_ranges": {
+    "_doc": "Plasticity / adaptation / brake tunables. Change these to test different learning dynamics.",
+    "learning_rate": 0.009166898423015749,
+    "plasticity_threshold": 0.6653720671278502,
+    "adaptation_tau_ticks": 49.5365600775745,
+    "adaptation_target_excitatory_multiplier": 1.5,
+    "adaptation_target_inhibitory_multiplier": 1.0,
+    "_doc_adaptation": "v149: adapt builds toward 0.55 \u00d7 multiplier when firing. Tau=20 ticks. Excitatory uses 1.5\u00d7 to bias the brake against +1 dominance.",
+    "autoreceptor_coefficient": 0.12624622938942723,
+    "autoreceptor_tau_ticks": 150.0,
+    "autoreceptor_rate_coeff": 0.35,
+    "_doc_autoreceptor": "Per-neuron autoreceptor that subtracts from theta1_eff (v154 sign back to v152 form \u2014 see CHANGELOG_v154 for context).",
+    "sensory_boost_function": "tanh",
+    "sensory_boost_scale": 1.0,
+    "_doc_sensory_boost": "v152 saturating cap: boosted_external = scale * tanh(scale * external_input). Asymptote = scale. 1.0 keeps strong inputs near threshold; lowering compresses further.",
+    "plasticity_brake_threshold": 0.5,
+    "plasticity_brake_slope": 1.8,
+    "plasticity_brake_floor": 0.1,
+    "_doc_plasticity_brake": "v152: when input_saturation_fraction > brake_threshold, learning_rate_mod is multiplied by max(floor, 1 - slope*(sat-threshold)).",
+    "fitness_g_weight": 0.590180429309567
+  },
+  "genetic_lottery": {
+    "_doc": "v162 \u2014 per-NxEr trait variation at birth. Each NxEr samples its own value from these ranges, creating the genetic diversity that selection acts on (the missing ingredient that kept M10 heritability at 0 across all 743 v161 NAS trials). Inheritance + mutation at mating carries traits across generations.",
+    "metabolic_rate_multiplier_range": [
+      0.9043951096767753,
+      1.5308047057298697
+    ],
+    "_doc_metabolic_rate_multiplier_range": "At birth each NxEr samples a multiplier uniformly from this range and applies it to its base metabolic_rate. [0.85, 1.15] means \u00b115% variation. Wider = more diversity but also more individuals at survival extremes.",
+    "intrinsic_timescale_jitter": 3.522449678165417,
+    "_doc_intrinsic_timescale_jitter": "At birth each NxEr adds a uniform random value in [-jitter, +jitter] to intrinsic_timescale_default. 0.0 = no per-NxEr variation (all neurons in all NxErs have same timescale).",
+    "firing_threshold_jitter": 0.07889266302113421,
+    "_doc_firing_threshold_jitter": "Same idea for firing_threshold_excitatory / inhibitory. 0.04 = \u00b10.04 around the architecture default of 0.55. 0.0 = no per-NxEr variation.",
+    "mutation_strength": 0.07940064968165149,
+    "_doc_mutation_strength": "When offspring inherit a genetic trait from a parent, the value is perturbed by \u00b1mutation_strength \u00d7 (parent_value). 0.05 = 5% perturbation. 0 = exact copy."
+  },
+  "healthy_bands": {
+    "_doc": "Target ranges shown on the dashboard. NxErs operating in these bands are coloured green.",
+    "M1_excitatory_fraction": [
+      0.18,
+      0.28
+    ],
+    "M2_mean_gate": [
+      0.4,
+      0.85
+    ],
+    "M3_pac_modulation_idx": [
+      0.005,
+      0.1
+    ],
+    "M5_branching_ratio": [
+      0.92,
+      1.1
+    ],
+    "M6_spontaneous_fraction": [
+      0.1,
+      0.45
+    ],
+    "M7_zero_input_mi_ratio": [
+      0.4,
+      1.2
+    ],
+    "M9_transfer_ratio": [
+      0.85,
+      1.3
+    ],
+    "M10_heritability_r": [
+      0.2,
+      1.0
+    ],
+    "sensory_motor_corr": [
+      0.2,
+      1.0
+    ],
+    "pop_mean_idle_seconds": [
+      0.0,
+      1.5
+    ],
+    "input_saturation_fraction": [
+      0.0,
+      0.3
+    ],
+    "input_locked_fraction": [
+      0.0,
+      0.2
+    ],
+    "exploration_trigger_rate": [
+      0.01,
+      0.4
+    ]
+  }
+}

20260517_093026/nas_log.csv

@@ -0,0 +1,32 @@
+trial_id,completed_at_iso,fitness,final_alive,peak_alive,alive_q1,alive_q2,alive_q3,alive_mean,M1,M6,M9,M10,M10_peak,mean_streak_last,mean_streak_first,locked,surv_score,expl_rate,sm_corr,sm_corr_peak,sm_corr_mean,g_pc1,g_pc1_peak,g_posman,g_meanr,g_l1l2,n_samples,wall_actual_s,error,arch_summary,is_global_best
+4,2026-05-17T10:00:30,5.5619,30.0,31.0,31.0,29.0,29.0,29.75,0.2471,0.1940,1.0342,-0.0210,0.3846,32.75,2.74,0.8928,0.4304,0.0348,-0.0010,0.2829,0.0702,0.3498,0.6508,0.5544,0.0942,1.5289,2121,1804.1,,"metabolic_ramp_per_sec=2.009 max_atrophy=5.876 metabolic_rate_abs_cap_multiple=9.013 idle_explore_seconds=2.344 explore_probability=0.72723 mate_cooldown_seconds=19 circadian_cycle_ticks=1126 num_hidden_neurons_default=15 connection_probability=0.22184 afferent_synapse_strength=0.88905 firing_threshold_excitatory=0.57021 spontaneous_firing_rate=0.00622 intrinsic_timescale_default=24.102 resting_potential_decay=0.30401 sensorimotor_coupling=2.934 symmetric_stdp=False refractory_period_ticks=2 post_spike_mp_reset=0.65975 sphere_topology=sensory_association_motor cross_sphere_coupling=2.787 cryst_capacity=2.011 free_energy_beta=1.473 learning_rate=0.04214 plasticity_threshold=0.36605 autoreceptor_coefficient=0.15553 adaptation_tau_ticks=34.264 fitness_g_weight=0.71295 intrinsic_timescale_jitter=2.987 firing_threshold_jitter=0.13494 mutation_strength=0.07869 metabolic_rate_multiplier_range=[0.7396473049991001, 1.4194278278010557]",1
+8,2026-05-17T10:00:30,5.7487,30.0,34.0,32.0,33.0,30.0,31.25,0.1557,0.3511,0.9783,-0.3056,0.5675,6.95,3.55,0.6966,0.4466,0.0462,0.0143,0.2226,0.0449,0.3464,0.5574,0.5711,0.1107,1.4764,2001,1804.3,,"metabolic_ramp_per_sec=6.25 max_atrophy=3.267 metabolic_rate_abs_cap_multiple=41.566 idle_explore_seconds=1.306 explore_probability=0.75741 mate_cooldown_seconds=20 circadian_cycle_ticks=374 num_hidden_neurons_default=6 connection_probability=0.28749 afferent_synapse_strength=1.798 firing_threshold_excitatory=0.69883 spontaneous_firing_rate=0.00613 intrinsic_timescale_default=12.689 resting_potential_decay=0.1663 sensorimotor_coupling=2.8 symmetric_stdp=False refractory_period_ticks=3 post_spike_mp_reset=0.36953 sphere_topology=sensory_association_motor cross_sphere_coupling=2.004 cryst_capacity=1.609 free_energy_beta=1.884 learning_rate=0.00332 plasticity_threshold=0.6335 autoreceptor_coefficient=0.19071 adaptation_tau_ticks=34.467 fitness_g_weight=0.10359 intrinsic_timescale_jitter=7.118 firing_threshold_jitter=0.11136 mutation_strength=0.04021 metabolic_rate_multiplier_range=[0.9073444377407571, 1.1954562568179203]",1
+7,2026-05-17T10:00:31,5.8342,33.0,33.0,31.0,33.0,33.0,32.50,0.3227,0.2334,1.1156,-0.6005,0.9005,34.51,1.83,0.8404,0.4428,0.0540,-0.0146,0.3713,0.0611,0.3241,0.6753,0.7874,0.1612,1.2878,1733,1804.8,,"metabolic_ramp_per_sec=14.534 max_atrophy=10.435 metabolic_rate_abs_cap_multiple=33.307 idle_explore_seconds=0.71778 explore_probability=0.33062 mate_cooldown_seconds=6 circadian_cycle_ticks=893 num_hidden_neurons_default=23 connection_probability=0.16829 afferent_synapse_strength=0.97633 firing_threshold_excitatory=0.41504 spontaneous_firing_rate=0.01875 intrinsic_timescale_default=28.227 resting_potential_decay=0.23278 sensorimotor_coupling=0.17064 symmetric_stdp=False refractory_period_ticks=2 post_spike_mp_reset=0.06852 sphere_topology=sensory_association_motor cross_sphere_coupling=1.737 cryst_capacity=0.57948 free_energy_beta=0.43937 learning_rate=0.00249 plasticity_threshold=0.64473 autoreceptor_coefficient=0.13076 adaptation_tau_ticks=47.664 fitness_g_weight=0.65737 intrinsic_timescale_jitter=2.086 firing_threshold_jitter=0.10046 mutation_strength=0.06084 metabolic_rate_multiplier_range=[0.7978294233454313, 1.2240034152872]",1
+5,2026-05-17T10:00:31,4.8808,31.0,31.0,30.0,31.0,31.0,30.75,0.0092,0.4145,0.9919,0.0000,0.0000,7.97,6.80,0.0336,0.4970,0.0098,-0.0066,0.2447,0.0368,0.3508,0.6828,0.6194,0.1055,1.7578,1933,1804.8,,"metabolic_ramp_per_sec=5.966 max_atrophy=2.364 metabolic_rate_abs_cap_multiple=9.094 idle_explore_seconds=1.519 explore_probability=0.55306 mate_cooldown_seconds=6 circadian_cycle_ticks=372 num_hidden_neurons_default=7 connection_probability=0.21868 afferent_synapse_strength=1.687 firing_threshold_excitatory=0.65789 spontaneous_firing_rate=0.00609 intrinsic_timescale_default=13.236 resting_potential_decay=0.26724 sensorimotor_coupling=0.64271 symmetric_stdp=False refractory_period_ticks=11 post_spike_mp_reset=0.93551 sphere_topology=sensory_association_motor cross_sphere_coupling=0.28298 cryst_capacity=1.818 free_energy_beta=0.90231 learning_rate=0.01257 plasticity_threshold=0.48907 autoreceptor_coefficient=0.20692 adaptation_tau_ticks=42.3 fitness_g_weight=0.4111 intrinsic_timescale_jitter=5.228 firing_threshold_jitter=0.09693 mutation_strength=0.02788 metabolic_rate_multiplier_range=[0.9023428619293611, 1.0797941529776938]",0
+10,2026-05-17T10:00:31,6.1426,28.0,31.0,29.0,30.0,28.0,28.75,0.1482,0.1105,1.0682,0.2987,0.8875,4.59,4.21,1.0000,0.4741,0.1548,0.0000,0.9400,0.0752,0.3617,0.5665,0.5104,0.0501,1.6882,2141,1804.9,,"metabolic_ramp_per_sec=16.383 max_atrophy=4.336 metabolic_rate_abs_cap_multiple=20.976 idle_explore_seconds=0.52615 explore_probability=0.66807 mate_cooldown_seconds=20 circadian_cycle_ticks=1195 num_hidden_neurons_default=19 connection_probability=0.44215 afferent_synapse_strength=1.499 firing_threshold_excitatory=0.67773 spontaneous_firing_rate=0.00964 intrinsic_timescale_default=11.575 resting_potential_decay=0.29997 sensorimotor_coupling=0.53116 symmetric_stdp=True refractory_period_ticks=0 post_spike_mp_reset=0.17936 sphere_topology=sensory_association_motor cross_sphere_coupling=0.80042 cryst_capacity=2.075 free_energy_beta=0.48376 learning_rate=0.03921 plasticity_threshold=0.61295 autoreceptor_coefficient=0.13234 adaptation_tau_ticks=36.796 fitness_g_weight=0.87217 intrinsic_timescale_jitter=6.533 firing_threshold_jitter=0.06905 mutation_strength=0.05967 metabolic_rate_multiplier_range=[0.9005076379682235, 1.1723385446501156]",1
+20,2026-05-17T10:00:31,5.8299,26.0,33.0,31.0,33.0,29.0,29.75,0.1679,0.1917,0.9958,-0.1229,0.8186,25.65,2.21,0.9827,0.4871,0.0668,0.0026,0.5771,0.1226,0.3923,0.6066,0.9945,0.2620,1.7869,2385,1804.9,,"metabolic_ramp_per_sec=17.946 max_atrophy=8.93 metabolic_rate_abs_cap_multiple=26.294 idle_explore_seconds=1.298 explore_probability=0.38397 mate_cooldown_seconds=9 circadian_cycle_ticks=423 num_hidden_neurons_default=12 connection_probability=0.24466 afferent_synapse_strength=1.491 firing_threshold_excitatory=0.68526 spontaneous_firing_rate=0.03389 intrinsic_timescale_default=12.214 resting_potential_decay=0.28465 sensorimotor_coupling=0.8295 symmetric_stdp=True refractory_period_ticks=1 post_spike_mp_reset=0.83263 sphere_topology=sensory_association_motor cross_sphere_coupling=0.82293 cryst_capacity=2.449 free_energy_beta=1.241 learning_rate=0.00519 plasticity_threshold=0.44435 autoreceptor_coefficient=0.11045 adaptation_tau_ticks=38.321 fitness_g_weight=0.69742 intrinsic_timescale_jitter=3.927 firing_threshold_jitter=0.13091 mutation_strength=0.09463 metabolic_rate_multiplier_range=[0.6441978225354431, 1.5276536584946192]",0
+22,2026-05-17T10:00:31,6.3955,34.0,34.0,31.0,32.0,33.0,32.50,0.0173,0.4611,1.0219,-0.2540,0.9992,6.93,5.74,0.0452,0.6214,0.0158,0.0121,0.2709,0.0359,0.3218,0.6244,0.4323,0.0299,1.2135,1735,1804.9,,"metabolic_ramp_per_sec=5.325 max_atrophy=4.349 metabolic_rate_abs_cap_multiple=42.342 idle_explore_seconds=0.64553 explore_probability=0.30429 mate_cooldown_seconds=7 circadian_cycle_ticks=460 num_hidden_neurons_default=6 connection_probability=0.27256 afferent_synapse_strength=1.427 firing_threshold_excitatory=0.54097 spontaneous_firing_rate=0.00547 intrinsic_timescale_default=14.338 resting_potential_decay=0.17068 sensorimotor_coupling=2.579 symmetric_stdp=False refractory_period_ticks=10 post_spike_mp_reset=0.23342 sphere_topology=sensory_association_motor cross_sphere_coupling=1.275 cryst_capacity=1.589 free_energy_beta=1.401 learning_rate=0.00469 plasticity_threshold=0.6165 autoreceptor_coefficient=0.16796 adaptation_tau_ticks=42.156 fitness_g_weight=0.90841 intrinsic_timescale_jitter=1.327 firing_threshold_jitter=0.04614 mutation_strength=0.11736 metabolic_rate_multiplier_range=[0.8893209058775209, 1.0892754102706979]",1
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+9,2026-05-17T10:00:31,5.9932,31.0,35.0,34.0,30.0,30.0,31.25,0.3544,0.2492,1.0751,-0.2792,0.7501,9.06,2.13,0.8798,0.4814,0.0324,-0.1208,0.3520,0.0919,0.3324,0.5415,0.6737,0.1122,1.4976,2040,1805.2,,"metabolic_ramp_per_sec=6.508 max_atrophy=4.344 metabolic_rate_abs_cap_multiple=25.83 idle_explore_seconds=1.812 explore_probability=0.71175 mate_cooldown_seconds=14 circadian_cycle_ticks=800 num_hidden_neurons_default=14 connection_probability=0.4216 afferent_synapse_strength=1.615 firing_threshold_excitatory=0.42769 spontaneous_firing_rate=0.01618 intrinsic_timescale_default=14.087 resting_potential_decay=0.10089 sensorimotor_coupling=2.313 symmetric_stdp=True refractory_period_ticks=2 post_spike_mp_reset=0.74123 sphere_topology=sensory_association_motor cross_sphere_coupling=1.637 cryst_capacity=2.169 free_energy_beta=1.29 learning_rate=0.01181 plasticity_threshold=0.47107 autoreceptor_coefficient=0.05193 adaptation_tau_ticks=13.01 fitness_g_weight=0.14809 intrinsic_timescale_jitter=7.192 firing_threshold_jitter=0.11942 mutation_strength=0.13189 metabolic_rate_multiplier_range=[0.6446059317487486, 1.2195420924615736]",0
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+13,2026-05-17T10:00:36,4.9222,30.0,30.0,30.0,30.0,30.0,30.00,0.0416,0.3029,1.0535,0.0000,0.0000,5.19,5.36,0.0763,0.5378,0.0084,-0.0337,0.4724,0.0514,0.4264,0.5443,0.5427,0.1187,1.6429,718,1810.6,,"metabolic_ramp_per_sec=10.179 max_atrophy=12.215 metabolic_rate_abs_cap_multiple=57.911 idle_explore_seconds=1.919 explore_probability=0.59531 mate_cooldown_seconds=10 circadian_cycle_ticks=827 num_hidden_neurons_default=16 connection_probability=0.17802 afferent_synapse_strength=1.742 firing_threshold_excitatory=0.47046 spontaneous_firing_rate=0.01182 intrinsic_timescale_default=25.744 resting_potential_decay=0.13684 sensorimotor_coupling=0.13864 symmetric_stdp=True refractory_period_ticks=9 post_spike_mp_reset=0.84974 sphere_topology=chc6 cross_sphere_coupling=1.483 cryst_capacity=0.98797 free_energy_beta=1.415 learning_rate=0.00253 plasticity_threshold=0.46578 autoreceptor_coefficient=0.17595 adaptation_tau_ticks=17.777 fitness_g_weight=0.00554 intrinsic_timescale_jitter=0.8527 firing_threshold_jitter=0.06377 mutation_strength=0.04287 metabolic_rate_multiplier_range=[0.8628375668164654, 1.473525403715714]",0
+12,2026-05-17T10:00:37,4.8364,32.0,32.0,30.0,31.0,32.0,31.25,0.1347,0.2663,1.0208,0.0000,0.0000,2.78,3.38,0.5717,0.5955,0.0458,0.0410,0.1480,0.0417,0.3947,0.5675,0.9244,0.2798,1.5002,693,1810.9,,"metabolic_ramp_per_sec=12.99 max_atrophy=14.194 metabolic_rate_abs_cap_multiple=46.326 idle_explore_seconds=0.73348 explore_probability=0.45878 mate_cooldown_seconds=16 circadian_cycle_ticks=638 num_hidden_neurons_default=16 connection_probability=0.34902 afferent_synapse_strength=0.74955 firing_threshold_excitatory=0.67001 spontaneous_firing_rate=0.0204 intrinsic_timescale_default=22.672 resting_potential_decay=0.18155 sensorimotor_coupling=2.092 symmetric_stdp=False refractory_period_ticks=3 post_spike_mp_reset=0.42045 sphere_topology=chc6 cross_sphere_coupling=1.218 cryst_capacity=2.167 free_energy_beta=0.81659 learning_rate=0.04127 plasticity_threshold=0.57093 autoreceptor_coefficient=0.23056 adaptation_tau_ticks=34.621 fitness_g_weight=0.21018 intrinsic_timescale_jitter=2.578 firing_threshold_jitter=0.06627 mutation_strength=0.10783 metabolic_rate_multiplier_range=[0.875015589617153, 1.3836638637638696]",0
+11,2026-05-17T10:00:37,5.4917,30.0,32.0,30.0,32.0,31.0,30.75,0.1910,0.2418,0.9662,0.0000,0.0000,2.55,2.50,0.6828,0.4679,0.0581,-0.0442,0.2234,0.0514,0.3258,0.5296,0.6371,0.1216,1.3756,703,1810.9,,"metabolic_ramp_per_sec=14.726 max_atrophy=4.573 metabolic_rate_abs_cap_multiple=9.231 idle_explore_seconds=0.72489 explore_probability=0.39696 mate_cooldown_seconds=19 circadian_cycle_ticks=371 num_hidden_neurons_default=14 connection_probability=0.25534 afferent_synapse_strength=1.211 firing_threshold_excitatory=0.60386 spontaneous_firing_rate=0.05186 intrinsic_timescale_default=15.285 resting_potential_decay=0.1069 sensorimotor_coupling=2.631 symmetric_stdp=True refractory_period_ticks=2 post_spike_mp_reset=0.58059 sphere_topology=chc6 cross_sphere_coupling=1.309 cryst_capacity=2.468 free_energy_beta=0.4966 learning_rate=0.04742 plasticity_threshold=0.3153 autoreceptor_coefficient=0.16931 adaptation_tau_ticks=23.827 fitness_g_weight=0.8995 intrinsic_timescale_jitter=3.488 firing_threshold_jitter=0.07799 mutation_strength=0.12485 metabolic_rate_multiplier_range=[0.6665275710758036, 1.0744125935422772]",0
+24,2026-05-17T10:00:37,4.9171,30.0,30.0,30.0,30.0,30.0,30.00,0.0384,0.2862,1.0439,0.0000,0.0000,5.53,6.05,0.0270,0.6627,0.0016,0.0528,0.2925,0.0627,0.3588,0.6972,0.2695,0.0315,1.5986,535,1810.9,,"metabolic_ramp_per_sec=15.724 max_atrophy=5.952 metabolic_rate_abs_cap_multiple=44.071 idle_explore_seconds=0.93408 explore_probability=0.76712 mate_cooldown_seconds=19 circadian_cycle_ticks=1078 num_hidden_neurons_default=23 connection_probability=0.16101 afferent_synapse_strength=0.70567 firing_threshold_excitatory=0.47572 spontaneous_firing_rate=0.0069 intrinsic_timescale_default=24.996 resting_potential_decay=0.31623 sensorimotor_coupling=2.475 symmetric_stdp=False refractory_period_ticks=10 post_spike_mp_reset=0.86937 sphere_topology=chc6 cross_sphere_coupling=1.876 cryst_capacity=2.02 free_energy_beta=0.64605 learning_rate=0.00885 plasticity_threshold=0.32168 autoreceptor_coefficient=0.15369 adaptation_tau_ticks=34.905 fitness_g_weight=0.54922 intrinsic_timescale_jitter=5.586 firing_threshold_jitter=0.01821 mutation_strength=0.14651 metabolic_rate_multiplier_range=[0.9246854662955566, 1.2909638522898081]",0
+0,2026-05-17T10:00:37,5.4776,32.0,32.0,30.0,30.0,30.0,30.50,0.2259,0.2785,1.0687,0.0000,0.0000,2.32,2.79,0.4365,0.6613,0.0268,0.0190,0.2544,0.0486,0.4070,0.5621,0.8569,0.2379,2.0672,631,1811.2,,"metabolic_ramp_per_sec=12.231 max_atrophy=1.838 metabolic_rate_abs_cap_multiple=22.302 idle_explore_seconds=0.79106 explore_probability=0.64188 mate_cooldown_seconds=16 circadian_cycle_ticks=1058 num_hidden_neurons_default=23 connection_probability=0.17608 afferent_synapse_strength=1.106 firing_threshold_excitatory=0.40894 spontaneous_firing_rate=0.00917 intrinsic_timescale_default=19.118 resting_potential_decay=0.10663 sensorimotor_coupling=0.59651 symmetric_stdp=True refractory_period_ticks=3 post_spike_mp_reset=0.44921 sphere_topology=chc6 cross_sphere_coupling=1.021 cryst_capacity=0.81096 free_energy_beta=1.927 learning_rate=0.0049 plasticity_threshold=0.64772 autoreceptor_coefficient=0.20176 adaptation_tau_ticks=16.386 fitness_g_weight=0.33659 intrinsic_timescale_jitter=6.78 firing_threshold_jitter=0.09056 mutation_strength=0.12493 metabolic_rate_multiplier_range=[0.6324610451830518, 1.1031940072584052]",0
+1,2026-05-17T10:00:37,4.9452,30.0,30.0,30.0,30.0,30.0,30.00,0.0610,0.2917,0.9905,0.0000,0.0000,3.77,4.23,0.0180,0.5923,0.0067,0.0080,0.2317,0.0493,0.3844,0.6289,0.5716,0.0914,1.7534,646,1811.3,,"metabolic_ramp_per_sec=13.676 max_atrophy=8.739 metabolic_rate_abs_cap_multiple=58.602 idle_explore_seconds=1.133 explore_probability=0.53122 mate_cooldown_seconds=19 circadian_cycle_ticks=943 num_hidden_neurons_default=17 connection_probability=0.32321 afferent_synapse_strength=1.445 firing_threshold_excitatory=0.41375 spontaneous_firing_rate=0.00941 intrinsic_timescale_default=14.367 resting_potential_decay=0.11995 sensorimotor_coupling=0.69837 symmetric_stdp=False refractory_period_ticks=6 post_spike_mp_reset=0.27797 sphere_topology=chc6 cross_sphere_coupling=2.105 cryst_capacity=1.867 free_energy_beta=0.42138 learning_rate=0.01548 plasticity_threshold=0.44593 autoreceptor_coefficient=0.12404 adaptation_tau_ticks=18.38 fitness_g_weight=0.63498 intrinsic_timescale_jitter=3.698 firing_threshold_jitter=0.04049 mutation_strength=0.1403 metabolic_rate_multiplier_range=[0.7869489569603978, 1.1846460088332844]",0
+14,2026-05-17T10:00:38,4.9266,30.0,30.0,30.0,30.0,30.0,30.00,0.0399,0.3211,0.8489,0.0000,0.0000,5.06,4.72,0.0339,0.6587,0.0013,0.0066,0.4124,0.0455,0.3745,0.5903,0.6204,0.1147,1.6854,623,1811.7,,"metabolic_ramp_per_sec=17.327 max_atrophy=8.492 metabolic_rate_abs_cap_multiple=10.611 idle_explore_seconds=0.84824 explore_probability=0.709 mate_cooldown_seconds=13 circadian_cycle_ticks=436 num_hidden_neurons_default=20 connection_probability=0.35027 afferent_synapse_strength=1.785 firing_threshold_excitatory=0.57864 spontaneous_firing_rate=0.06965 intrinsic_timescale_default=27.611 resting_potential_decay=0.25316 sensorimotor_coupling=2.158 symmetric_stdp=True refractory_period_ticks=8 post_spike_mp_reset=0.44591 sphere_topology=chc6 cross_sphere_coupling=2.297 cryst_capacity=1.543 free_energy_beta=1.365 learning_rate=0.00334 plasticity_threshold=0.6446 autoreceptor_coefficient=0.14001 adaptation_tau_ticks=40.071 fitness_g_weight=0.2746 intrinsic_timescale_jitter=2.174 firing_threshold_jitter=0.04796 mutation_strength=0.09022 metabolic_rate_multiplier_range=[0.6271191738526575, 1.207150482974734]",0
+18,2026-05-17T10:00:40,4.9079,31.0,31.0,31.0,31.0,31.0,31.00,0.0364,0.2935,0.9901,0.0000,0.0000,6.23,6.41,0.0245,0.6138,0.0010,-0.0335,0.2528,0.0456,0.3720,0.5709,0.3551,0.0542,1.9066,497,1814.0,,"metabolic_ramp_per_sec=3.937 max_atrophy=14.782 metabolic_rate_abs_cap_multiple=48.697 idle_explore_seconds=1.064 explore_probability=0.45703 mate_cooldown_seconds=11 circadian_cycle_ticks=370 num_hidden_neurons_default=22 connection_probability=0.34426 afferent_synapse_strength=0.61518 firing_threshold_excitatory=0.52602 spontaneous_firing_rate=0.01946 intrinsic_timescale_default=17.538 resting_potential_decay=0.19055 sensorimotor_coupling=2.675 symmetric_stdp=True refractory_period_ticks=11 post_spike_mp_reset=0.15299 sphere_topology=chc6 cross_sphere_coupling=1.395 cryst_capacity=2.151 free_energy_beta=1.307 learning_rate=0.00353 plasticity_threshold=0.5087 autoreceptor_coefficient=0.18009 adaptation_tau_ticks=34.636 fitness_g_weight=0.3223 intrinsic_timescale_jitter=2.231 firing_threshold_jitter=0.06762 mutation_strength=0.11756 metabolic_rate_multiplier_range=[0.6859233091827918, 1.5640420332377003]",0
+23,2026-05-17T10:00:42,4.9041,30.0,30.0,30.0,30.0,30.0,30.00,0.0353,0.3020,0.9512,0.0000,0.0000,6.40,6.65,0.0404,0.5405,0.0018,0.0163,0.4019,0.0551,0.4514,0.6950,0.4138,0.0739,1.7907,558,1815.6,,"metabolic_ramp_per_sec=11.107 max_atrophy=5.396 metabolic_rate_abs_cap_multiple=14.466 idle_explore_seconds=1.815 explore_probability=0.61984 mate_cooldown_seconds=10 circadian_cycle_ticks=812 num_hidden_neurons_default=23 connection_probability=0.29814 afferent_synapse_strength=0.69653 firing_threshold_excitatory=0.41196 spontaneous_firing_rate=0.01656 intrinsic_timescale_default=15.091 resting_potential_decay=0.16259 sensorimotor_coupling=0.27398 symmetric_stdp=False refractory_period_ticks=12 post_spike_mp_reset=0.67228 sphere_topology=chc6 cross_sphere_coupling=2.748 cryst_capacity=0.86298 free_energy_beta=1.295 learning_rate=0.00476 plasticity_threshold=0.31609 autoreceptor_coefficient=0.20125 adaptation_tau_ticks=28.82 fitness_g_weight=0.63478 intrinsic_timescale_jitter=2.784 firing_threshold_jitter=0.05 mutation_strength=0.10712 metabolic_rate_multiplier_range=[0.7721040307668546, 1.100183323461605]",0

20260517_093026/nas_top1.json

@@ -0,0 +1,154 @@
+{
+  "_meta": {
+    "name": "nas_best_t026",
+    "version": "NxonArchNAS v0.4 (v162)",
+    "description": "Architecture found by NAS \u2014 trial 26, fitness 6.6655. Plug-and-play compatible with architectures/default.json: drop this file into architectures/ or load with NEURAXON_ARCH=path/to/this.json python main.py",
+    "source": "NxonArchNAS",
+    "rank": 1,
+    "trial_id": 26,
+    "fitness": 6.665529054794548,
+    "saved_at": "2026-05-17T10:00:42",
+    "notes": [
+      "Sections inherited from default.json:  healthy_bands (unchanged target ranges)",
+      "Sections overridden by NAS:  biology, neural, operating_ranges, genetic_lottery",
+      "Load with NEURAXON_ARCH=path/to/this.json python main.py"
+    ]
+  },
+  "biology": {
+    "_doc": "Game-world / bio-inspired dynamics. Independent of neural architecture \u2014 change these to study survival pressure without touching the brain.",
+    "metabolic_ramp_per_sec": 11.391003558626577,
+    "_doc_metabolic_ramp_per_sec": "Multiplier added to food drain and metabolic_rate per second of idle. With 1s idle \u2192 factor (1 + 10*1) = 11\u00d7. Capped by max_atrophy.",
+    "max_atrophy": 14.985181498596074,
+    "_doc_max_atrophy": "Hard cap on the atrophy multiplier (v151 fix). 5.0 = max 5\u00d7 normal drain even after extended idle.",
+    "metabolic_rate_abs_cap_multiple": 33.46129802609645,
+    "_doc_metabolic_rate_abs_cap_multiple": "Absolute ceiling on the per-NxEr metabolic_rate, expressed as a multiple of the initial value (v153 F-1).",
+    "start_food_default": 25.0,
+    "food_respawn_default": 400,
+    "food_sources_default": 50,
+    "_doc_food": "Defaults if the user doesn't change them via the menu sliders. The menu still overrides at startup.",
+    "mate_cooldown_seconds": 11,
+    "circadian_cycle_ticks": 640,
+    "idle_explore_seconds": 0.626909920442136,
+    "explore_probability": 0.5231483466223243,
+    "_doc_idle_explore": "v152 idle-exploration safety net. If an NxEr has been idle \u2265 idle_explore_seconds, with explore_probability per tick, override motor output with a random direction."
+  },
+  "neural": {
+    "_doc": "Network architecture (topology + per-neuron parameters). Change these to test different brain configurations.",
+    "num_input_neurons": 10,
+    "num_output_neurons": 7,
+    "num_hidden_neurons_default": 23,
+    "_doc_neuron_counts": "Inputs: 10 sensory channels (movement, encounter, terrain, hunger, sight, smell, daynight, temp, proprio, song). Outputs: 7 motor (MoveX, MoveY, Social, MateIntent, GiveFood, Resting, Sing).",
+    "connection_probability": 0.37886180328599384,
+    "afferent_synapse_strength": 1.0526520650566633,
+    "proprioceptive_afferent_gain": 1.8,
+    "sensory_input_gain": 0.9,
+    "firing_threshold_excitatory": 0.6798556767145782,
+    "firing_threshold_inhibitory": -0.55,
+    "spontaneous_firing_rate": 0.055728168220012475,
+    "intrinsic_timescale_default": 29.577041889317076,
+    "resting_potential_decay": 0.15970138604156234,
+    "sensorimotor_coupling": 1.1489125467888066,
+    "_doc_sensorimotor_coupling": "v164 \u2014 multiplier on input\u2192output direct-edge probability. 0.0 = pre-v164 (uniform random links). 1.0 = 2x more sensory\u2192motor connections. 3.0 = 4x. The fitness component sensory_motor_corr was stuck near zero in 1425 v163 trials because there was no architectural bias for sensory pathways. Boost this and plasticity will amplify the correlations.",
+    "symmetric_stdp": true,
+    "_doc_symmetric_stdp": "v169 (v4.77) \u2014 opt-in for MultiNeuraxon2 Bug #3 fix. False (default) preserves v161-v168 asymmetric STDP where state==-1 is invisible to plasticity (only +1-driven correlations strengthen synapses). True enables signed STDP traces + symmetric (-1,-1) \u2192 LTP and (-1,+1) \u2192 LTD branches. Hypothesised to address the input saturation root cause we worked around with sm_corr_peak in v165. NAS will A/B test it.",
+    "refractory_period_ticks": 0,
+    "_doc_refractory_period_ticks": "v171 (v4.79) \u2014 number of ticks a neuron is FORCED to state=0 after each firing event (0\u2192\u00b11 transition). 0 = no refractory (v161-v170 behaviour). The v170 @2400s membrane diagnostics showed only 0.6% of samples at state=0 \u2014 the network had become a bistable +1/-1 oscillator with no rest band. The paper's trinary firing model REQUIRES a meaningful 0 state. This parameter restores it. NAS searches 0-12 ticks; biologically realistic values are 1-5 (~ 1-5 game ticks at 10Hz). The membrane potential continues to evolve during refractory so the neuron can fire again immediately after the buffer expires.",
+    "post_spike_mp_reset": 0.31817632723379985,
+    "_doc_post_spike_mp_reset": "v172 (v4.80) \u2014 after-hyperpolarization (AHP). Fraction by which membrane_potential is pulled toward 0 after each firing event (0\u2192\u00b11). 0.0 = no reset (v171 behaviour). 1.0 = full reset to mp=0. Combined with refractory_period_ticks, restores the paper's intended trinary dynamics: refractory holds state=0 for N ticks while mp drops back to rest band, then state stays at 0 NATURALLY until inputs push mp past threshold again (rather than immediately re-firing). v171 found refract=1 alone only achieved 0.3% state=0 because mp stayed saturated past threshold; this parameter fixes that by snapping mp back to the rest band. NAS searches 0.0-1.0.",
+    "_doc_thresholds": "Membrane firing thresholds (above which trinary_state = +1, below -threshold = -1). The membrane potential is a low-pass filter with intrinsic_timescale ticks. resting_potential_decay multiplies mp by (1-this) each tick before the membrane equation update.",
+    "sphere_topology": "sensory_association_motor",
+    "cross_sphere_coupling": 1.4859859488492706,
+    "cryst_capacity": 0.5740392226911524,
+    "free_energy_beta": 1.153894955226042
+  },
+  "operating_ranges": {
+    "_doc": "Plasticity / adaptation / brake tunables. Change these to test different learning dynamics.",
+    "learning_rate": 0.009166898423015749,
+    "plasticity_threshold": 0.6653720671278502,
+    "adaptation_tau_ticks": 49.5365600775745,
+    "adaptation_target_excitatory_multiplier": 1.5,
+    "adaptation_target_inhibitory_multiplier": 1.0,
+    "_doc_adaptation": "v149: adapt builds toward 0.55 \u00d7 multiplier when firing. Tau=20 ticks. Excitatory uses 1.5\u00d7 to bias the brake against +1 dominance.",
+    "autoreceptor_coefficient": 0.12624622938942723,
+    "autoreceptor_tau_ticks": 150.0,
+    "autoreceptor_rate_coeff": 0.35,
+    "_doc_autoreceptor": "Per-neuron autoreceptor that subtracts from theta1_eff (v154 sign back to v152 form \u2014 see CHANGELOG_v154 for context).",
+    "sensory_boost_function": "tanh",
+    "sensory_boost_scale": 1.0,
+    "_doc_sensory_boost": "v152 saturating cap: boosted_external = scale * tanh(scale * external_input). Asymptote = scale. 1.0 keeps strong inputs near threshold; lowering compresses further.",
+    "plasticity_brake_threshold": 0.5,
+    "plasticity_brake_slope": 1.8,
+    "plasticity_brake_floor": 0.1,
+    "_doc_plasticity_brake": "v152: when input_saturation_fraction > brake_threshold, learning_rate_mod is multiplied by max(floor, 1 - slope*(sat-threshold)).",
+    "fitness_g_weight": 0.590180429309567
+  },
+  "genetic_lottery": {
+    "_doc": "v162 \u2014 per-NxEr trait variation at birth. Each NxEr samples its own value from these ranges, creating the genetic diversity that selection acts on (the missing ingredient that kept M10 heritability at 0 across all 743 v161 NAS trials). Inheritance + mutation at mating carries traits across generations.",
+    "metabolic_rate_multiplier_range": [
+      0.9043951096767753,
+      1.5308047057298697
+    ],
+    "_doc_metabolic_rate_multiplier_range": "At birth each NxEr samples a multiplier uniformly from this range and applies it to its base metabolic_rate. [0.85, 1.15] means \u00b115% variation. Wider = more diversity but also more individuals at survival extremes.",
+    "intrinsic_timescale_jitter": 3.522449678165417,
+    "_doc_intrinsic_timescale_jitter": "At birth each NxEr adds a uniform random value in [-jitter, +jitter] to intrinsic_timescale_default. 0.0 = no per-NxEr variation (all neurons in all NxErs have same timescale).",
+    "firing_threshold_jitter": 0.07889266302113421,
+    "_doc_firing_threshold_jitter": "Same idea for firing_threshold_excitatory / inhibitory. 0.04 = \u00b10.04 around the architecture default of 0.55. 0.0 = no per-NxEr variation.",
+    "mutation_strength": 0.07940064968165149,
+    "_doc_mutation_strength": "When offspring inherit a genetic trait from a parent, the value is perturbed by \u00b1mutation_strength \u00d7 (parent_value). 0.05 = 5% perturbation. 0 = exact copy."
+  },
+  "healthy_bands": {
+    "_doc": "Target ranges shown on the dashboard. NxErs operating in these bands are coloured green.",
+    "M1_excitatory_fraction": [
+      0.18,
+      0.28
+    ],
+    "M2_mean_gate": [
+      0.4,
+      0.85
+    ],
+    "M3_pac_modulation_idx": [
+      0.005,
+      0.1
+    ],
+    "M5_branching_ratio": [
+      0.92,
+      1.1
+    ],
+    "M6_spontaneous_fraction": [
+      0.1,
+      0.45
+    ],
+    "M7_zero_input_mi_ratio": [
+      0.4,
+      1.2
+    ],
+    "M9_transfer_ratio": [
+      0.85,
+      1.3
+    ],
+    "M10_heritability_r": [
+      0.2,
+      1.0
+    ],
+    "sensory_motor_corr": [
+      0.2,
+      1.0
+    ],
+    "pop_mean_idle_seconds": [
+      0.0,
+      1.5
+    ],
+    "input_saturation_fraction": [
+      0.0,
+      0.3
+    ],
+    "input_locked_fraction": [
+      0.0,
+      0.2
+    ],
+    "exploration_trigger_rate": [
+      0.01,
+      0.4
+    ]
+  }
+}

20260517_093026/nas_top2.json

@@ -0,0 +1,154 @@
+{
+  "_meta": {
+    "name": "nas_best_t022",
+    "version": "NxonArchNAS v0.4 (v162)",
+    "description": "Architecture found by NAS \u2014 trial 22, fitness 6.3955. Plug-and-play compatible with architectures/default.json: drop this file into architectures/ or load with NEURAXON_ARCH=path/to/this.json python main.py",
+    "source": "NxonArchNAS",
+    "rank": 2,
+    "trial_id": 22,
+    "fitness": 6.395541357781685,
+    "saved_at": "2026-05-17T10:00:42",
+    "notes": [
+      "Sections inherited from default.json:  healthy_bands (unchanged target ranges)",
+      "Sections overridden by NAS:  biology, neural, operating_ranges, genetic_lottery",
+      "Load with NEURAXON_ARCH=path/to/this.json python main.py"
+    ]
+  },
+  "biology": {
+    "_doc": "Game-world / bio-inspired dynamics. Independent of neural architecture \u2014 change these to study survival pressure without touching the brain.",
+    "metabolic_ramp_per_sec": 5.324606493176821,
+    "_doc_metabolic_ramp_per_sec": "Multiplier added to food drain and metabolic_rate per second of idle. With 1s idle \u2192 factor (1 + 10*1) = 11\u00d7. Capped by max_atrophy.",
+    "max_atrophy": 4.3488401366228056,
+    "_doc_max_atrophy": "Hard cap on the atrophy multiplier (v151 fix). 5.0 = max 5\u00d7 normal drain even after extended idle.",
+    "metabolic_rate_abs_cap_multiple": 42.3422631339859,
+    "_doc_metabolic_rate_abs_cap_multiple": "Absolute ceiling on the per-NxEr metabolic_rate, expressed as a multiple of the initial value (v153 F-1).",
+    "start_food_default": 25.0,
+    "food_respawn_default": 400,
+    "food_sources_default": 50,
+    "_doc_food": "Defaults if the user doesn't change them via the menu sliders. The menu still overrides at startup.",
+    "mate_cooldown_seconds": 7,
+    "circadian_cycle_ticks": 460,
+    "idle_explore_seconds": 0.6455256054379297,
+    "explore_probability": 0.3042881289958607,
+    "_doc_idle_explore": "v152 idle-exploration safety net. If an NxEr has been idle \u2265 idle_explore_seconds, with explore_probability per tick, override motor output with a random direction."
+  },
+  "neural": {
+    "_doc": "Network architecture (topology + per-neuron parameters). Change these to test different brain configurations.",
+    "num_input_neurons": 10,
+    "num_output_neurons": 7,
+    "num_hidden_neurons_default": 6,
+    "_doc_neuron_counts": "Inputs: 10 sensory channels (movement, encounter, terrain, hunger, sight, smell, daynight, temp, proprio, song). Outputs: 7 motor (MoveX, MoveY, Social, MateIntent, GiveFood, Resting, Sing).",
+    "connection_probability": 0.272555271798008,
+    "afferent_synapse_strength": 1.427245362941723,
+    "proprioceptive_afferent_gain": 1.8,
+    "sensory_input_gain": 0.9,
+    "firing_threshold_excitatory": 0.5409737437023058,
+    "firing_threshold_inhibitory": -0.55,
+    "spontaneous_firing_rate": 0.005473590542270987,
+    "intrinsic_timescale_default": 14.338307571061165,
+    "resting_potential_decay": 0.17067959327807192,
+    "sensorimotor_coupling": 2.578820194021567,
+    "_doc_sensorimotor_coupling": "v164 \u2014 multiplier on input\u2192output direct-edge probability. 0.0 = pre-v164 (uniform random links). 1.0 = 2x more sensory\u2192motor connections. 3.0 = 4x. The fitness component sensory_motor_corr was stuck near zero in 1425 v163 trials because there was no architectural bias for sensory pathways. Boost this and plasticity will amplify the correlations.",
+    "symmetric_stdp": false,
+    "_doc_symmetric_stdp": "v169 (v4.77) \u2014 opt-in for MultiNeuraxon2 Bug #3 fix. False (default) preserves v161-v168 asymmetric STDP where state==-1 is invisible to plasticity (only +1-driven correlations strengthen synapses). True enables signed STDP traces + symmetric (-1,-1) \u2192 LTP and (-1,+1) \u2192 LTD branches. Hypothesised to address the input saturation root cause we worked around with sm_corr_peak in v165. NAS will A/B test it.",
+    "refractory_period_ticks": 10,
+    "_doc_refractory_period_ticks": "v171 (v4.79) \u2014 number of ticks a neuron is FORCED to state=0 after each firing event (0\u2192\u00b11 transition). 0 = no refractory (v161-v170 behaviour). The v170 @2400s membrane diagnostics showed only 0.6% of samples at state=0 \u2014 the network had become a bistable +1/-1 oscillator with no rest band. The paper's trinary firing model REQUIRES a meaningful 0 state. This parameter restores it. NAS searches 0-12 ticks; biologically realistic values are 1-5 (~ 1-5 game ticks at 10Hz). The membrane potential continues to evolve during refractory so the neuron can fire again immediately after the buffer expires.",
+    "post_spike_mp_reset": 0.23342380616002556,
+    "_doc_post_spike_mp_reset": "v172 (v4.80) \u2014 after-hyperpolarization (AHP). Fraction by which membrane_potential is pulled toward 0 after each firing event (0\u2192\u00b11). 0.0 = no reset (v171 behaviour). 1.0 = full reset to mp=0. Combined with refractory_period_ticks, restores the paper's intended trinary dynamics: refractory holds state=0 for N ticks while mp drops back to rest band, then state stays at 0 NATURALLY until inputs push mp past threshold again (rather than immediately re-firing). v171 found refract=1 alone only achieved 0.3% state=0 because mp stayed saturated past threshold; this parameter fixes that by snapping mp back to the rest band. NAS searches 0.0-1.0.",
+    "_doc_thresholds": "Membrane firing thresholds (above which trinary_state = +1, below -threshold = -1). The membrane potential is a low-pass filter with intrinsic_timescale ticks. resting_potential_decay multiplies mp by (1-this) each tick before the membrane equation update.",
+    "sphere_topology": "sensory_association_motor",
+    "cross_sphere_coupling": 1.2754168983126348,
+    "cryst_capacity": 1.5891247574211573,
+    "free_energy_beta": 1.4009790297842173
+  },
+  "operating_ranges": {
+    "_doc": "Plasticity / adaptation / brake tunables. Change these to test different learning dynamics.",
+    "learning_rate": 0.004686638882951858,
+    "plasticity_threshold": 0.6164990980179845,
+    "adaptation_tau_ticks": 42.15622721125735,
+    "adaptation_target_excitatory_multiplier": 1.5,
+    "adaptation_target_inhibitory_multiplier": 1.0,
+    "_doc_adaptation": "v149: adapt builds toward 0.55 \u00d7 multiplier when firing. Tau=20 ticks. Excitatory uses 1.5\u00d7 to bias the brake against +1 dominance.",
+    "autoreceptor_coefficient": 0.16795791784105157,
+    "autoreceptor_tau_ticks": 150.0,
+    "autoreceptor_rate_coeff": 0.35,
+    "_doc_autoreceptor": "Per-neuron autoreceptor that subtracts from theta1_eff (v154 sign back to v152 form \u2014 see CHANGELOG_v154 for context).",
+    "sensory_boost_function": "tanh",
+    "sensory_boost_scale": 1.0,
+    "_doc_sensory_boost": "v152 saturating cap: boosted_external = scale * tanh(scale * external_input). Asymptote = scale. 1.0 keeps strong inputs near threshold; lowering compresses further.",
+    "plasticity_brake_threshold": 0.5,
+    "plasticity_brake_slope": 1.8,
+    "plasticity_brake_floor": 0.1,
+    "_doc_plasticity_brake": "v152: when input_saturation_fraction > brake_threshold, learning_rate_mod is multiplied by max(floor, 1 - slope*(sat-threshold)).",
+    "fitness_g_weight": 0.9084114452126061
+  },
+  "genetic_lottery": {
+    "_doc": "v162 \u2014 per-NxEr trait variation at birth. Each NxEr samples its own value from these ranges, creating the genetic diversity that selection acts on (the missing ingredient that kept M10 heritability at 0 across all 743 v161 NAS trials). Inheritance + mutation at mating carries traits across generations.",
+    "metabolic_rate_multiplier_range": [
+      0.8893209058775209,
+      1.0892754102706979
+    ],
+    "_doc_metabolic_rate_multiplier_range": "At birth each NxEr samples a multiplier uniformly from this range and applies it to its base metabolic_rate. [0.85, 1.15] means \u00b115% variation. Wider = more diversity but also more individuals at survival extremes.",
+    "intrinsic_timescale_jitter": 1.3273823137657974,
+    "_doc_intrinsic_timescale_jitter": "At birth each NxEr adds a uniform random value in [-jitter, +jitter] to intrinsic_timescale_default. 0.0 = no per-NxEr variation (all neurons in all NxErs have same timescale).",
+    "firing_threshold_jitter": 0.04614177189213488,
+    "_doc_firing_threshold_jitter": "Same idea for firing_threshold_excitatory / inhibitory. 0.04 = \u00b10.04 around the architecture default of 0.55. 0.0 = no per-NxEr variation.",
+    "mutation_strength": 0.11736450386905103,
+    "_doc_mutation_strength": "When offspring inherit a genetic trait from a parent, the value is perturbed by \u00b1mutation_strength \u00d7 (parent_value). 0.05 = 5% perturbation. 0 = exact copy."
+  },
+  "healthy_bands": {
+    "_doc": "Target ranges shown on the dashboard. NxErs operating in these bands are coloured green.",
+    "M1_excitatory_fraction": [
+      0.18,
+      0.28
+    ],
+    "M2_mean_gate": [
+      0.4,
+      0.85
+    ],
+    "M3_pac_modulation_idx": [
+      0.005,
+      0.1
+    ],
+    "M5_branching_ratio": [
+      0.92,
+      1.1
+    ],
+    "M6_spontaneous_fraction": [
+      0.1,
+      0.45
+    ],
+    "M7_zero_input_mi_ratio": [
+      0.4,
+      1.2
+    ],
+    "M9_transfer_ratio": [
+      0.85,
+      1.3
+    ],
+    "M10_heritability_r": [
+      0.2,
+      1.0
+    ],
+    "sensory_motor_corr": [
+      0.2,
+      1.0
+    ],
+    "pop_mean_idle_seconds": [
+      0.0,
+      1.5
+    ],
+    "input_saturation_fraction": [
+      0.0,
+      0.3
+    ],
+    "input_locked_fraction": [
+      0.0,
+      0.2
+    ],
+    "exploration_trigger_rate": [
+      0.01,
+      0.4
+    ]
+  }
+}

20260517_093026/nas_top3.json

@@ -0,0 +1,154 @@
+{
+  "_meta": {
+    "name": "nas_best_t010",
+    "version": "NxonArchNAS v0.4 (v162)",
+    "description": "Architecture found by NAS \u2014 trial 10, fitness 6.1426. Plug-and-play compatible with architectures/default.json: drop this file into architectures/ or load with NEURAXON_ARCH=path/to/this.json python main.py",
+    "source": "NxonArchNAS",
+    "rank": 3,
+    "trial_id": 10,
+    "fitness": 6.1426027109231764,
+    "saved_at": "2026-05-17T10:00:42",
+    "notes": [
+      "Sections inherited from default.json:  healthy_bands (unchanged target ranges)",
+      "Sections overridden by NAS:  biology, neural, operating_ranges, genetic_lottery",
+      "Load with NEURAXON_ARCH=path/to/this.json python main.py"
+    ]
+  },
+  "biology": {
+    "_doc": "Game-world / bio-inspired dynamics. Independent of neural architecture \u2014 change these to study survival pressure without touching the brain.",
+    "metabolic_ramp_per_sec": 16.382794184423595,
+    "_doc_metabolic_ramp_per_sec": "Multiplier added to food drain and metabolic_rate per second of idle. With 1s idle \u2192 factor (1 + 10*1) = 11\u00d7. Capped by max_atrophy.",
+    "max_atrophy": 4.3360332675866795,
+    "_doc_max_atrophy": "Hard cap on the atrophy multiplier (v151 fix). 5.0 = max 5\u00d7 normal drain even after extended idle.",
+    "metabolic_rate_abs_cap_multiple": 20.975546439592073,
+    "_doc_metabolic_rate_abs_cap_multiple": "Absolute ceiling on the per-NxEr metabolic_rate, expressed as a multiple of the initial value (v153 F-1).",
+    "start_food_default": 25.0,
+    "food_respawn_default": 400,
+    "food_sources_default": 50,
+    "_doc_food": "Defaults if the user doesn't change them via the menu sliders. The menu still overrides at startup.",
+    "mate_cooldown_seconds": 20,
+    "circadian_cycle_ticks": 1195,
+    "idle_explore_seconds": 0.5261459676779284,
+    "explore_probability": 0.6680697451228657,
+    "_doc_idle_explore": "v152 idle-exploration safety net. If an NxEr has been idle \u2265 idle_explore_seconds, with explore_probability per tick, override motor output with a random direction."
+  },
+  "neural": {
+    "_doc": "Network architecture (topology + per-neuron parameters). Change these to test different brain configurations.",
+    "num_input_neurons": 10,
+    "num_output_neurons": 7,
+    "num_hidden_neurons_default": 19,
+    "_doc_neuron_counts": "Inputs: 10 sensory channels (movement, encounter, terrain, hunger, sight, smell, daynight, temp, proprio, song). Outputs: 7 motor (MoveX, MoveY, Social, MateIntent, GiveFood, Resting, Sing).",
+    "connection_probability": 0.44215110679118674,
+    "afferent_synapse_strength": 1.4993731333722473,
+    "proprioceptive_afferent_gain": 1.8,
+    "sensory_input_gain": 0.9,
+    "firing_threshold_excitatory": 0.6777291467708669,
+    "firing_threshold_inhibitory": -0.55,
+    "spontaneous_firing_rate": 0.009638959526931456,
+    "intrinsic_timescale_default": 11.57503887620965,
+    "resting_potential_decay": 0.2999717574767241,
+    "sensorimotor_coupling": 0.5311571109611437,
+    "_doc_sensorimotor_coupling": "v164 \u2014 multiplier on input\u2192output direct-edge probability. 0.0 = pre-v164 (uniform random links). 1.0 = 2x more sensory\u2192motor connections. 3.0 = 4x. The fitness component sensory_motor_corr was stuck near zero in 1425 v163 trials because there was no architectural bias for sensory pathways. Boost this and plasticity will amplify the correlations.",
+    "symmetric_stdp": true,
+    "_doc_symmetric_stdp": "v169 (v4.77) \u2014 opt-in for MultiNeuraxon2 Bug #3 fix. False (default) preserves v161-v168 asymmetric STDP where state==-1 is invisible to plasticity (only +1-driven correlations strengthen synapses). True enables signed STDP traces + symmetric (-1,-1) \u2192 LTP and (-1,+1) \u2192 LTD branches. Hypothesised to address the input saturation root cause we worked around with sm_corr_peak in v165. NAS will A/B test it.",
+    "refractory_period_ticks": 0,
+    "_doc_refractory_period_ticks": "v171 (v4.79) \u2014 number of ticks a neuron is FORCED to state=0 after each firing event (0\u2192\u00b11 transition). 0 = no refractory (v161-v170 behaviour). The v170 @2400s membrane diagnostics showed only 0.6% of samples at state=0 \u2014 the network had become a bistable +1/-1 oscillator with no rest band. The paper's trinary firing model REQUIRES a meaningful 0 state. This parameter restores it. NAS searches 0-12 ticks; biologically realistic values are 1-5 (~ 1-5 game ticks at 10Hz). The membrane potential continues to evolve during refractory so the neuron can fire again immediately after the buffer expires.",
+    "post_spike_mp_reset": 0.179360663418207,
+    "_doc_post_spike_mp_reset": "v172 (v4.80) \u2014 after-hyperpolarization (AHP). Fraction by which membrane_potential is pulled toward 0 after each firing event (0\u2192\u00b11). 0.0 = no reset (v171 behaviour). 1.0 = full reset to mp=0. Combined with refractory_period_ticks, restores the paper's intended trinary dynamics: refractory holds state=0 for N ticks while mp drops back to rest band, then state stays at 0 NATURALLY until inputs push mp past threshold again (rather than immediately re-firing). v171 found refract=1 alone only achieved 0.3% state=0 because mp stayed saturated past threshold; this parameter fixes that by snapping mp back to the rest band. NAS searches 0.0-1.0.",
+    "_doc_thresholds": "Membrane firing thresholds (above which trinary_state = +1, below -threshold = -1). The membrane potential is a low-pass filter with intrinsic_timescale ticks. resting_potential_decay multiplies mp by (1-this) each tick before the membrane equation update.",
+    "sphere_topology": "sensory_association_motor",
+    "cross_sphere_coupling": 0.8004171287834161,
+    "cryst_capacity": 2.0747490182709423,
+    "free_energy_beta": 0.4837625648850271
+  },
+  "operating_ranges": {
+    "_doc": "Plasticity / adaptation / brake tunables. Change these to test different learning dynamics.",
+    "learning_rate": 0.039210986900927905,
+    "plasticity_threshold": 0.6129545984590526,
+    "adaptation_tau_ticks": 36.79628517152787,
+    "adaptation_target_excitatory_multiplier": 1.5,
+    "adaptation_target_inhibitory_multiplier": 1.0,
+    "_doc_adaptation": "v149: adapt builds toward 0.55 \u00d7 multiplier when firing. Tau=20 ticks. Excitatory uses 1.5\u00d7 to bias the brake against +1 dominance.",
+    "autoreceptor_coefficient": 0.13234263331031074,
+    "autoreceptor_tau_ticks": 150.0,
+    "autoreceptor_rate_coeff": 0.35,
+    "_doc_autoreceptor": "Per-neuron autoreceptor that subtracts from theta1_eff (v154 sign back to v152 form \u2014 see CHANGELOG_v154 for context).",
+    "sensory_boost_function": "tanh",
+    "sensory_boost_scale": 1.0,
+    "_doc_sensory_boost": "v152 saturating cap: boosted_external = scale * tanh(scale * external_input). Asymptote = scale. 1.0 keeps strong inputs near threshold; lowering compresses further.",
+    "plasticity_brake_threshold": 0.5,
+    "plasticity_brake_slope": 1.8,
+    "plasticity_brake_floor": 0.1,
+    "_doc_plasticity_brake": "v152: when input_saturation_fraction > brake_threshold, learning_rate_mod is multiplied by max(floor, 1 - slope*(sat-threshold)).",
+    "fitness_g_weight": 0.8721667829060897
+  },
+  "genetic_lottery": {
+    "_doc": "v162 \u2014 per-NxEr trait variation at birth. Each NxEr samples its own value from these ranges, creating the genetic diversity that selection acts on (the missing ingredient that kept M10 heritability at 0 across all 743 v161 NAS trials). Inheritance + mutation at mating carries traits across generations.",
+    "metabolic_rate_multiplier_range": [
+      0.9005076379682235,
+      1.1723385446501156
+    ],
+    "_doc_metabolic_rate_multiplier_range": "At birth each NxEr samples a multiplier uniformly from this range and applies it to its base metabolic_rate. [0.85, 1.15] means \u00b115% variation. Wider = more diversity but also more individuals at survival extremes.",
+    "intrinsic_timescale_jitter": 6.532692844775432,
+    "_doc_intrinsic_timescale_jitter": "At birth each NxEr adds a uniform random value in [-jitter, +jitter] to intrinsic_timescale_default. 0.0 = no per-NxEr variation (all neurons in all NxErs have same timescale).",
+    "firing_threshold_jitter": 0.06904548520184131,
+    "_doc_firing_threshold_jitter": "Same idea for firing_threshold_excitatory / inhibitory. 0.04 = \u00b10.04 around the architecture default of 0.55. 0.0 = no per-NxEr variation.",
+    "mutation_strength": 0.05967481275401808,
+    "_doc_mutation_strength": "When offspring inherit a genetic trait from a parent, the value is perturbed by \u00b1mutation_strength \u00d7 (parent_value). 0.05 = 5% perturbation. 0 = exact copy."
+  },
+  "healthy_bands": {
+    "_doc": "Target ranges shown on the dashboard. NxErs operating in these bands are coloured green.",
+    "M1_excitatory_fraction": [
+      0.18,
+      0.28
+    ],
+    "M2_mean_gate": [
+      0.4,
+      0.85
+    ],
+    "M3_pac_modulation_idx": [
+      0.005,
+      0.1
+    ],
+    "M5_branching_ratio": [
+      0.92,
+      1.1
+    ],
+    "M6_spontaneous_fraction": [
+      0.1,
+      0.45
+    ],
+    "M7_zero_input_mi_ratio": [
+      0.4,
+      1.2
+    ],
+    "M9_transfer_ratio": [
+      0.85,
+      1.3
+    ],
+    "M10_heritability_r": [
+      0.2,
+      1.0
+    ],
+    "sensory_motor_corr": [
+      0.2,
+      1.0
+    ],
+    "pop_mean_idle_seconds": [
+      0.0,
+      1.5
+    ],
+    "input_saturation_fraction": [
+      0.0,
+      0.3
+    ],
+    "input_locked_fraction": [
+      0.0,
+      0.2
+    ],
+    "exploration_trigger_rate": [
+      0.01,
+      0.4
+    ]
+  }
+}

20260517_093026/trial_000/nxon2_430391171__MembraneDiag.txt

@@ -0,0 +1,113 @@
+# Neuraxon Game of Life v4.87 — Membrane diagnostics
+# game_id=nxon2_430391171
+# rows=108
+# sampled every 100 ticks, first 3 hidden + first 3 input neurons of first 3 alive NxErs each sample (v176 — layer column)
+tick	nxer_id	neuron_id	layer	mp	adapt	autoreceptor	trinary_state	firing_rate_avg	state_streak	energy_level
+100	0	6	hidden	-0.310510	0.158376	0.028065	0	0.171527	2	122.289985
+100	0	7	hidden	-0.321406	0.141358	0.029512	0	0.176428	2	131.847642
+100	0	8	hidden	0.955232	0.112391	0.025025	0	0.161057	3	127.912840
+100	0	0	input	-0.359332	0.110564	0.030840	0	0.180435	4	110.053154
+100	0	1	input	-0.517601	0.131626	0.027710	0	0.169560	1	155.825547
+100	0	2	input	-0.152494	0.108773	0.024065	1	0.165560	1	122.143535
+100	1	6	hidden	0.511437	0.113473	0.028044	0	0.130741	3	64.516952
+100	1	7	hidden	0.263961	0.131003	0.031594	0	0.144208	2	70.005379
+100	1	8	hidden	0.860029	0.158539	0.032789	0	0.147664	1	73.935689
+100	1	0	input	0.816577	0.147361	0.036033	0	0.159327	1	35.207767
+100	1	1	input	0.456715	0.125140	0.029372	1	0.144931	1	83.600621
+100	1	2	input	-1.100737	0.130617	0.033250	0	0.149906	4	62.945815
+100	2	6	hidden	0.267020	0.095894	0.025677	0	0.139661	2	73.901897
+100	2	7	hidden	-0.314589	0.112865	0.023042	0	0.128482	5	111.869462
+100	2	8	hidden	0.171784	0.103773	0.022397	0	0.127634	1	103.987974
+100	2	0	input	-0.426229	0.143744	0.034588	0	0.173006	2	57.352083
+100	2	1	input	0.837425	0.099058	0.025146	0	0.136641	3	51.654707
+100	2	2	input	-0.636326	0.102849	0.022594	0	0.128669	5	97.965800
+200	0	6	hidden	-0.443551	0.174034	0.053997	0	0.209580	2	74.251391
+200	0	7	hidden	0.311617	0.178560	0.054721	0	0.211547	1	100.386019
+200	0	8	hidden	-0.454150	0.174014	0.051925	-1	0.212892	1	83.996509
+200	0	0	input	0.396697	0.144675	0.053371	0	0.204584	1	82.273383
+200	0	1	input	-1.358813	0.156682	0.053608	0	0.207834	2	151.625557
+200	0	2	input	-0.210233	0.134111	0.050944	1	0.208399	1	113.803362
+200	1	6	hidden	0.219002	0.164751	0.055240	0	0.198255	3	4.584688
+200	1	7	hidden	-0.701689	0.130966	0.055223	0	0.196261	4	10.525722
+200	1	8	hidden	0.564846	0.134690	0.054038	1	0.200661	1	13.128814
+200	1	0	input	-1.123431	0.146795	0.054241	0	0.189951	4	8.409226
+200	1	1	input	-0.012539	0.124051	0.053559	1	0.199883	1	24.334867
+200	1	2	input	0.399722	0.157069	0.055885	1	0.207181	1	0.000000
+200	2	6	hidden	-0.957217	0.139041	0.048989	0	0.183230	2	7.134377
+200	2	7	hidden	-0.049986	0.139124	0.049081	1	0.193820	1	44.280998
+200	2	8	hidden	0.145204	0.152654	0.049109	0	0.185517	3	11.343519
+200	2	0	input	-0.821388	0.133436	0.051944	0	0.189605	3	7.325180
+200	2	1	input	-0.121854	0.126135	0.042759	-1	0.178970	1	0.000000
+200	2	2	input	-0.525315	0.135320	0.048725	-1	0.193356	1	40.051734
+300	0	6	hidden	-0.449645	0.124443	0.061380	0	0.200187	2	39.883498
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20260517_093026/trial_000__arch.json

@@ -0,0 +1,50 @@
+{
+  "_meta": {
+    "source": "NxonArchNAS",
+    "trial_id": 0,
+    "sampled_at": "2026-05-17T09:30:26"
+  },
+  "biology": {
+    "metabolic_ramp_per_sec": 12.23082877532614,
+    "max_atrophy": 1.8376451955060036,
+    "metabolic_rate_abs_cap_multiple": 22.301524555194202,
+    "idle_explore_seconds": 0.79106362392741,
+    "explore_probability": 0.6418827284984074,
+    "mate_cooldown_seconds": 16,
+    "circadian_cycle_ticks": 1058
+  },
+  "neural": {
+    "num_hidden_neurons_default": 23,
+    "connection_probability": 0.17608164978882485,
+    "afferent_synapse_strength": 1.1063061836223245,
+    "firing_threshold_excitatory": 0.40893916583142115,
+    "spontaneous_firing_rate": 0.009167192661639309,
+    "intrinsic_timescale_default": 19.117816338273972,
+    "resting_potential_decay": 0.10663399242096591,
+    "sensorimotor_coupling": 0.5965129520599455,
+    "symmetric_stdp": true,
+    "refractory_period_ticks": 3,
+    "post_spike_mp_reset": 0.4492090462838536,
+    "sphere_topology": "chc6",
+    "cross_sphere_coupling": 1.0207515495539756,
+    "cryst_capacity": 0.8109589996235631,
+    "free_energy_beta": 1.9272622227515281
+  },
+  "operating_ranges": {
+    "learning_rate": 0.00489693023424257,
+    "plasticity_threshold": 0.6477201283171735,
+    "autoreceptor_coefficient": 0.20176147342595346,
+    "adaptation_tau_ticks": 16.386372655075604,
+    "fitness_g_weight": 0.33659454511262676
+  },
+  "healthy_bands": {},
+  "genetic_lottery": {
+    "intrinsic_timescale_jitter": 6.779954930779678,
+    "firing_threshold_jitter": 0.09055890470503365,
+    "mutation_strength": 0.12492667552566943,
+    "metabolic_rate_multiplier_range": [
+      0.6324610451830518,
+      1.1031940072584052
+    ]
+  }
+}

20260517_093026/trial_001/nxon2_024722855__MembraneDiag.txt

@@ -0,0 +1,113 @@
+# Neuraxon Game of Life v4.87 — Membrane diagnostics
+# game_id=nxon2_024722855
+# rows=108
+# sampled every 100 ticks, first 3 hidden + first 3 input neurons of first 3 alive NxErs each sample (v176 — layer column)
+tick	nxer_id	neuron_id	layer	mp	adapt	autoreceptor	trinary_state	firing_rate_avg	state_streak	energy_level
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+200	2	0	input	0.475747	0.074953	0.032487	0	0.133114	5	20.573134
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+300	1	0	input	-0.907939	0.089665	0.039671	-1	0.141264	1	60.866857
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+400	1	1	input	-1.626503	0.064486	0.040799	0	0.123540	5	97.472254
+400	1	2	input	-0.573860	0.071935	0.043229	0	0.132685	7	67.822144
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+400	2	8	hidden	-0.623512	0.073774	0.041444	-1	0.135798	1	19.997640
+400	2	0	input	-0.053993	0.065178	0.040532	-1	0.134383	1	0.000000
+400	2	1	input	0.005951	0.061954	0.040920	-1	0.134337	1	32.008992
+400	2	2	input	-0.725594	0.089446	0.043050	0	0.132423	4	19.400712
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+500	0	7	hidden	-0.839751	0.093638	0.045231	0	0.134746	4	108.930889
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+500	0	0	input	0.082927	0.096523	0.046436	0	0.138154	1	104.202272
+500	0	1	input	-1.160001	0.075826	0.044894	0	0.133283	4	150.647864
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+500	2	0	input	-0.053993	0.065178	0.040532	-1	0.134383	1	0.000000
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+600	2	8	hidden	0.887673	0.071507	0.043455	0	0.123625	7	25.225037
+600	2	0	input	-0.053993	0.065178	0.040532	-1	0.134383	1	0.000000
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+600	2	2	input	-0.000247	0.068204	0.044431	0	0.127017	7	19.377246

20260517_093026/trial_001__arch.json

@@ -0,0 +1,50 @@
+{
+  "_meta": {
+    "source": "NxonArchNAS",
+    "trial_id": 1,
+    "sampled_at": "2026-05-17T09:30:26"
+  },
+  "biology": {
+    "metabolic_ramp_per_sec": 13.675708587101086,
+    "max_atrophy": 8.73907923463846,
+    "metabolic_rate_abs_cap_multiple": 58.602019726927274,
+    "idle_explore_seconds": 1.1327756298583778,
+    "explore_probability": 0.5312243787639362,
+    "mate_cooldown_seconds": 19,
+    "circadian_cycle_ticks": 943
+  },
+  "neural": {
+    "num_hidden_neurons_default": 17,
+    "connection_probability": 0.32320564357702863,
+    "afferent_synapse_strength": 1.4454862034579081,
+    "firing_threshold_excitatory": 0.4137473150966987,
+    "spontaneous_firing_rate": 0.0094056079454035,
+    "intrinsic_timescale_default": 14.366535199246357,
+    "resting_potential_decay": 0.11994799423090688,
+    "sensorimotor_coupling": 0.6983726590830905,
+    "symmetric_stdp": false,
+    "refractory_period_ticks": 6,
+    "post_spike_mp_reset": 0.2779736031100921,
+    "sphere_topology": "chc6",
+    "cross_sphere_coupling": 2.105460940375654,
+    "cryst_capacity": 1.8670953310733345,
+    "free_energy_beta": 0.42138426628353215
+  },
+  "operating_ranges": {
+    "learning_rate": 0.015476712432532746,
+    "plasticity_threshold": 0.4459328715880337,
+    "autoreceptor_coefficient": 0.12403619342337653,
+    "adaptation_tau_ticks": 18.38028123085951,
+    "fitness_g_weight": 0.6349782881970603
+  },
+  "healthy_bands": {},
+  "genetic_lottery": {
+    "intrinsic_timescale_jitter": 3.698081694808926,
+    "firing_threshold_jitter": 0.04049217401764169,
+    "mutation_strength": 0.14030085335075831,
+    "metabolic_rate_multiplier_range": [
+      0.7869489569603978,
+      1.1846460088332844
+    ]
+  }
+}

20260517_093026/trial_002/nxon2_117492643__MembraneDiag.txt

@@ -0,0 +1,113 @@
+# Neuraxon Game of Life v4.87 — Membrane diagnostics
+# game_id=nxon2_117492643
+# rows=108
+# sampled every 100 ticks, first 3 hidden + first 3 input neurons of first 3 alive NxErs each sample (v176 — layer column)
+tick	nxer_id	neuron_id	layer	mp	adapt	autoreceptor	trinary_state	firing_rate_avg	state_streak	energy_level
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+100	0	7	hidden	-0.491524	0.141110	0.029642	0	0.169621	4	119.712955
+100	0	8	hidden	-0.380709	0.146541	0.031780	0	0.178411	2	76.046859
+100	0	0	input	-0.307087	0.137604	0.029271	0	0.167838	4	99.356858
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+200	0	7	hidden	0.389599	0.125805	0.052396	0	0.198733	3	59.331918
+200	0	8	hidden	-0.205793	0.160961	0.047962	0	0.184348	2	40.561034
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+200	1	2	input	0.659053	0.114085	0.037916	1	0.163358	1	0.000000
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+200	2	0	input	-0.509593	0.163829	0.060882	0	0.227781	3	78.331044
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+400	2	7	hidden	0.161381	0.125036	0.070877	-1	0.224566	1	69.989118
+400	2	8	hidden	-0.666151	0.082191	0.057415	-1	0.178624	1	35.289353
+400	2	0	input	-0.752274	0.171069	0.084132	0	0.263725	1	23.743560
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+500	0	6	hidden	-0.859324	0.092541	0.055271	0	0.152917	3	47.562063
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+500	0	1	input	-0.157188	0.139057	0.068910	-1	0.226797	1	0.000000
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+500	2	1	input	-1.740882	0.142113	0.087567	0	0.259819	1	26.124682
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+600	2	8	hidden	-0.277155	0.072227	0.049221	-1	0.143583	1	53.161023
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+600	2	1	input	-0.772742	0.140117	0.088993	0	0.257027	2	20.495941
+600	2	2	input	-0.092656	0.081570	0.055752	0	0.156625	11	26.722553

20260517_093026/trial_002__arch.json

@@ -0,0 +1,50 @@
+{
+  "_meta": {
+    "source": "NxonArchNAS",
+    "trial_id": 2,
+    "sampled_at": "2026-05-17T09:30:26"
+  },
+  "biology": {
+    "metabolic_ramp_per_sec": 13.010591334933011,
+    "max_atrophy": 4.464804848598631,
+    "metabolic_rate_abs_cap_multiple": 24.862702189596735,
+    "idle_explore_seconds": 1.990289870703219,
+    "explore_probability": 0.23356276852957036,
+    "mate_cooldown_seconds": 19,
+    "circadian_cycle_ticks": 332
+  },
+  "neural": {
+    "num_hidden_neurons_default": 16,
+    "connection_probability": 0.2703494361066987,
+    "afferent_synapse_strength": 0.6794263262538567,
+    "firing_threshold_excitatory": 0.6739408372556634,
+    "spontaneous_firing_rate": 0.024094772943053604,
+    "intrinsic_timescale_default": 23.794113955817473,
+    "resting_potential_decay": 0.15315663601353516,
+    "sensorimotor_coupling": 1.4976937784768318,
+    "symmetric_stdp": true,
+    "refractory_period_ticks": 2,
+    "post_spike_mp_reset": 0.26488016649805246,
+    "sphere_topology": "chc6",
+    "cross_sphere_coupling": 1.0859893311408328,
+    "cryst_capacity": 2.494651555978322,
+    "free_energy_beta": 0.535163966314455
+  },
+  "operating_ranges": {
+    "learning_rate": 0.004423850642103479,
+    "plasticity_threshold": 0.5245472536652602,
+    "autoreceptor_coefficient": 0.10254832170458705,
+    "adaptation_tau_ticks": 33.38343960894162,
+    "fitness_g_weight": 0.493515834889631
+  },
+  "healthy_bands": {},
+  "genetic_lottery": {
+    "intrinsic_timescale_jitter": 1.2227305547860885,
+    "firing_threshold_jitter": 0.02399730025836754,
+    "mutation_strength": 0.10846255775452253,
+    "metabolic_rate_multiplier_range": [
+      0.8645237551368081,
+      1.5236066003166662
+    ]
+  }
+}

20260517_093026/trial_003/nxon2_729357211__MembraneDiag.txt

@@ -0,0 +1,329 @@
+# Neuraxon Game of Life v4.87 — Membrane diagnostics
+# game_id=nxon2_729357211
+# rows=324
+# sampled every 100 ticks, first 3 hidden + first 3 input neurons of first 3 alive NxErs each sample (v176 — layer column)
+tick	nxer_id	neuron_id	layer	mp	adapt	autoreceptor	trinary_state	firing_rate_avg	state_streak	energy_level
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+100	0	7	hidden	-0.004779	0.042465	0.008056	0	0.062957	4	110.160614
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+100	0	2	input	-0.401850	0.023342	0.004006	0	0.046834	19	127.017685
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+100	1	8	hidden	-0.427073	0.080844	0.017694	0	0.090926	2	103.192811
+100	1	0	input	0.585960	0.046653	0.012129	1	0.079434	1	122.250454
+100	1	1	input	-0.534881	0.059836	0.016012	0	0.084751	3	103.098638
+100	1	2	input	-0.208873	0.082476	0.018298	0	0.094173	1	112.493701
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+200	0	8	hidden	0.313425	0.039688	0.007651	0	0.048415	7	156.909057
+200	0	0	input	0.326384	0.039884	0.011419	0	0.059822	22	101.850106
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20260517_093026/trial_003__arch.json

@@ -0,0 +1,50 @@
+{
+  "_meta": {
+    "source": "NxonArchNAS",
+    "trial_id": 3,
+    "sampled_at": "2026-05-17T09:30:26"
+  },
+  "biology": {
+    "metabolic_ramp_per_sec": 11.542544491711581,
+    "max_atrophy": 6.694358707605751,
+    "metabolic_rate_abs_cap_multiple": 38.98619827477866,
+    "idle_explore_seconds": 1.32970975312629,
+    "explore_probability": 0.350848471989088,
+    "mate_cooldown_seconds": 14,
+    "circadian_cycle_ticks": 1181
+  },
+  "neural": {
+    "num_hidden_neurons_default": 6,
+    "connection_probability": 0.35408502307695555,
+    "afferent_synapse_strength": 0.737462091580424,
+    "firing_threshold_excitatory": 0.6654365350387327,
+    "spontaneous_firing_rate": 0.04009746965152188,
+    "intrinsic_timescale_default": 24.90917211846381,
+    "resting_potential_decay": 0.1850438682577613,
+    "sensorimotor_coupling": 0.8805003859422784,
+    "symmetric_stdp": false,
+    "refractory_period_ticks": 7,
+    "post_spike_mp_reset": 0.0032453161017292897,
+    "sphere_topology": "sensory_association_motor",
+    "cross_sphere_coupling": 2.611555709510301,
+    "cryst_capacity": 1.0968895828972658,
+    "free_energy_beta": 1.3862141412722089
+  },
+  "operating_ranges": {
+    "learning_rate": 0.020439552260656982,
+    "plasticity_threshold": 0.5878722675543697,
+    "autoreceptor_coefficient": 0.2443776197740229,
+    "adaptation_tau_ticks": 40.47848796208258,
+    "fitness_g_weight": 0.6089702114381723
+  },
+  "healthy_bands": {},
+  "genetic_lottery": {
+    "intrinsic_timescale_jitter": 4.315032240957006,
+    "firing_threshold_jitter": 0.11679397179458373,
+    "mutation_strength": 0.08894597738537308,
+    "metabolic_rate_multiplier_range": [
+      0.6534937439923721,
+      1.4693809400413333
+    ]
+  }
+}

20260517_093026/trial_004/nxon2_005929900__LifespanLog.txt

@@ -0,0 +1,11 @@
+# Neuraxon Game of Life v4.87 — Per-NxEr lifespan log
+# game_id=nxon2_005929900
+# rows=4 (one row per NxEr death)
+# founders_at_start=30
+# founders_still_alive_at_export=28
+# format: tab-separated, header row
+nxer_id	birth_tick	death_tick	age_ticks	was_original
+24	1	375	374	1
+29	1	548	547	1
+30	256	896	640	0
+32	1285	1485	200	0

20260517_093026/trial_004/nxon2_005929900__MembraneDiag.txt

@@ -0,0 +1,383 @@
+# Neuraxon Game of Life v4.87 — Membrane diagnostics
+# game_id=nxon2_005929900
+# rows=378
+# sampled every 100 ticks, first 3 hidden + first 3 input neurons of first 3 alive NxErs each sample (v176 — layer column)
+tick	nxer_id	neuron_id	layer	mp	adapt	autoreceptor	trinary_state	firing_rate_avg	state_streak	energy_level
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+100	1	0	input	0.755897	0.146254	0.034071	0	0.172064	3	92.098188
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+200	1	2	input	0.350164	0.121566	0.057639	0	0.203398	7	20.272381
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+300	0	0	input	0.829474	0.104374	0.057127	0	0.178092	3	16.141033
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+300	0	2	input	-1.111206	0.090815	0.053524	0	0.166076	1	25.436553
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+300	1	8	hidden	0.901163	0.135472	0.063899	0	0.203254	3	15.698215
+300	1	0	input	0.424852	0.199415	0.076085	1	0.258396	1	47.910323
+300	1	1	input	0.250510	0.150889	0.077683	1	0.259949	1	21.691721
+300	1	2	input	-0.683120	0.132845	0.065200	0	0.205770	3	9.072372
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+300	2	7	hidden	0.107414	0.108377	0.060303	-1	0.195195	1	21.832498
+300	2	8	hidden	0.361720	0.169563	0.070649	0	0.229949	2	27.218646
+300	2	0	input	0.684596	0.144114	0.068128	0	0.218812	3	68.566538
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