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The secretary problem is one of the fundamental problems in online decision making; a tight competitive ratio for this problem of $1/\mathrm{e} \approx 0.368$ has been known since the 1960s. Much more recently, the study of algorithms with predictions was introduced: The algorithm is equipped with a (possibly erroneou... |
In our cyber security model we define the concept of {\em penetration cost}, which is the cost that must be paid in order to break into the next layer of security. Given a tree $T$ rooted at a vertex $r$, a {\em penetrating cost} edge function $c$ on $T$, a {\em target-acquisition} vertex function $p$ on $T$, the atta... |
We study frequency allocation in wireless networks. A wireless network is modeled by an undirected graph, with vertices corresponding to cells. |
In the Block Graph Deletion problem, we are given a graph $G$ on $n$ vertices and a positive integer $k$, and the objective is to check whether it is possible to delete at most $k$ vertices from $G$ to make it a block graph, i.e., a graph in which each block is a clique. In this paper, we obtain a kernel with $\mathca... |
Let $n = 2^k$ be the length of the broadcast cycle of the RBO broadcast scheduling protocol (see [<a href="https://arxiv.org/abs/1108.5095" data-arxiv-id="1108.5095" class="link-https">arXiv:1108.5095</a>] and [<a href="https://arxiv.org/abs/1201.3318" data-arxiv-id="1201.3318" class="link-https">arXiv:1201.3318</a>]).... |
The resiliency of a network is its ability to remain \emph{effectively} functioning also when any of its nodes or links fails. However, to reduce operational and set-up costs, a network should be small in size, and this conflicts with the requirement of being resilient. |
This work is a continuation of efforts to define and understand competitive analysis of algorithms in a distributed shared memory setting, which is surprisingly different from the classical online setting. In fact, in a distributed shared memory setting, we find a counter-example to the theorem concerning classical ra... |
The Maximum Agreement Forest (Maf) problem is a well-studied problem in evolutionary biology, which asks for a largest common subforest of a given collection of phylogenetic trees with identical leaf label-set. However, the previous work about the Maf problem are mainly on two binary phylogenetic trees or two general ... |
We present two cache-oblivious sorting-based convex hull algorithms in the Binary Forking Model. The first is an algorithm for a presorted set of points which achieves $O(n)$ work, $O(\log n)$ span, and $O(n/B)$ serial cache complexity, where $B$ is the cache line size. |
We propose a novel generalization of Independent Set Reconfiguration (ISR): Connected Components Reconfiguration (CCR). In CCR, we are given a graph $G$, two vertex subsets $A$ and $B$, and a multiset $\mathcal{M}$ of positive integers. |
We study the two-dimensional geometric knapsack problem for convex polygons. Given a set of weighted convex polygons and a square knapsack, the goal is to select the most profitable subset of the given polygons that fits non-overlappingly into the knapsack. |
We consider the following class of submodular k-multiway partitioning problems: (Sub-$k$-MP) $\min \sum_{i=1}^k f(S_i): S_1 \uplus S_2 \uplus \cdots \uplus S_k = V \mbox{ and } S_i \neq \emptyset \mbox{ for all }i\in [k]$. Here $f$ is a non-negative submodular function, and $\uplus$ denotes the union of disjoint sets.... |
In the $l$-path vertex cover problem the input is an undirected graph $G$ and an integer $k$. The goal is to decide whether there is a set of vertices $S$ of size at most $k$ such that $G-S$ does not contain a path with $l$ vertices. |
We initiate the study of the Bipartite Contraction problem from the perspective of parameterized complexity. In this problem we are given a graph $G$ and an integer $k$, and the task is to determine whether we can obtain a bipartite graph from $G$ by a sequence of at most $k$ edge contractions. |
An $f$-edge (or vertex) connectivity certificate is a sparse subgraph that maintains connectivity under the failure of at most $f$ edges (or vertices). It is well known that any $n$-vertex graph admits an $f$-edge (or vertex) connectivity certificate with $\Theta(f n)$ edges (Nagamochi and Ibaraki, Algorithmica 1992).... |
Finding dense subnetworks, with density based on edges or more complex structures, such as subgraphs or $k$-cliques, is a fundamental algorithmic problem with many applications. While the problem has been studied extensively in static networks, much remains to be explored for temporal networks. |
The hypervolume indicator is one of the most used set-quality indicators for the assessment of stochastic multiobjective optimizers, as well as for selection in evolutionary multiobjective optimization algorithms. Its theoretical properties justify its wide acceptance, particularly the strict monotonicity with respect... |
Orienteering is the following optimization problem: given an edge-weighted graph (directed or undirected), two nodes s,t and a time limit T, find an s-t walk of total length at most T that maximizes the number of distinct nodes visited by the walk. One obtains a generalization, namely orienteering with time-windows (a... |
Given an undirected graph $G=(V,E)$, an {\em $(\alpha,\beta)$-spanner} $H=(V,E')$ is a subgraph that approximately preserves distances; for every $u,v\in V$, $d_H(u,v)\le \alpha\cdot d_G(u,v)+\beta$. An $(\alpha,\beta)$-hopset is a graph $H=(V,E")$, so that adding its edges to $G$ guarantees every pair has an ... |
In recent years, significant advances have been made in the design and analysis of fully dynamic algorithms. However, these theoretical results have received very little attention from the practical perspective. |
An optimal algorithm is presented about Conflict-Free Coloring for connected subgraphs of tree of rings. Suppose the number of the rings in the tree is |T| and the maximum length of rings is |R|. |
We consider the problem of designing succinct navigational oracles, i.e., succinct data structures supporting basic navigational queries such as degree, adjacency, and neighborhood efficiently for intersection graphs on a circle, which include graph classes such as {\it circle graphs}, {\it $k$-polygon-circle graphs}, ... |
We consider relative error low rank approximation of $tensors$ with respect to the Frobenius norm: given an order-$q$ tensor $A \in \mathbb{R}^{\prod_{i=1}^q n_i}$, output a rank-$k$ tensor $B$ for which $\|A-B\|_F^2 \leq (1+\epsilon)$OPT, where OPT $= \inf_{\textrm{rank-}k~A'} \|A-A'\|_F^2$. Despite the succe... |
We give a short proof that any comparison-based n^(1-epsilon)-approximation algorithm for the 1-dimensional Traveling Salesman Problem (TSP) requires Omega(n log n) comparisons. |
This article represents the computational model for spacial addresation of the sensors in the dynamically changing real-time internet of things system. The model bases on the Voronoi diagrams as a basic data structure. |
The paging problem is that of deciding which pages to keep in a memory of k pages in order to minimize the number of page faults. This paper introduces the marking algorithm, a simple randomized on-line algorithm for the paging problem, and gives a proof that its performance guarantee (competitive ratio) is O(log k). |
An algorithm for obtaining all n\times n binary matrices having exactly 2 units in every row and every column is described in the paper. After analysing the work of the algorithm a formula for calculating the number of these matrices has been obtained. |
Group testing is a long studied problem in combinatorics: A small set of $r$ ill people should be identified out of the whole ($n$ people) by using only queries (tests) of the form "Does set X contain an ill human? ". |
In this paper we present algorithms for several string problems in the Congested Clique model. In the Congested Clique model, $n$ nodes (computers) are used to solve some problem. |
A parallel algorithm has perfect strong scaling if its running time on P processors is linear in 1/P, including all communication costs. Distributed-memory parallel algorithms for matrix multiplication with perfect strong scaling have only recently been found. |
In this paper, we study learning and testing decision tree of size and depth that are significantly smaller than the number of attributes $n$. <br>Our main result addresses the problem of poly$(n,1/\epsilon)$ time algorithms with poly$(s,1/\epsilon)$ query complexity (independent of $n$) that distinguish between funct... |
A Bloom filter is a method for reducing the space (memory) required for representing a set by allowing a small error probability. In this paper we consider a \emph{Sliding Bloom Filter}: a data structure that, given a stream of elements, supports membership queries of the set of the last $n$ elements (a sliding window... |
The ``state-of-the-art'' in Length Limited Huffman Coding algorithms is the $\Theta(ND)$-time, $\Theta(N)$-space one of Hirschberg and Larmore, where $D\le N$ is the length restriction on the code. This is a very clever, very problem specific, technique. |
We initiate the study of stochastic optimization with oblivious noise, broadly generalizing the standard heavy-tailed noise setup. In our setting, in addition to random observation noise, the stochastic gradient may be subject to independent oblivious noise, which may not have bounded moments and is not necessarily ce... |
Users of routing services like Apple Maps, Google Maps, and Waze frequently wonder why a given route is proposed. This question particularly arises when dynamic conditions like traffic and road closures cause unusual routes to be proposed. |
We consider the recently introduced model of \emph{low ply graph drawing}, in which the ply-disks of the vertices do not have many common overlaps, which results in a good distribution of the vertices in the plane. The \emph{ply-disk} of a vertex in a straight-line drawing is the disk centered at it whose radius is ha... |
An efficient pairwise Boolean matching algorithm to solve the problem of matching single-output specified Boolean functions under input negation and/or input permutation and/or output negation (NPN) is proposed in this paper. We present the Structural Signature (SS) vector, which is composed of a 1st signature value, ... |
The main challenge in de novo assembly of NGS data is certainly to deal with repeats that are longer than the reads. This is particularly true for RNA- seq data, since coverage information cannot be used to flag repeated sequences, of which transposable elements are one of the main examples. |
We address the problem of detecting race conditions in programs that use semaphores for synchronization. Netzer and Miller showed that it is NP-complete to detect race conditions in programs that use many semaphores. |
A finite group of order $n$ can be represented by its Cayley table. In the word-RAM model the Cayley table of a group of order $n$ can be stored using $O(n^2)$ words and can be used to answer a multiplication query in constant time. |
The classic technique of Baker [J. ACM '94] is the most fundamental approach for designing approximation schemes on planar, or more generally topologically-constrained graphs, and it has been applied in a myriad of different variants and settings throughout the last 30 years. In this work we propose a dynamic vari... |
Submodular maximization is one of the central topics in combinatorial optimization. It has found numerous applications in the real world. |
We consider Kleinberg's celebrated small world graph model (Kleinberg, 2000), in which a D-dimensional grid {0,...,n-1}^D is augmented with a constant number of additional unidirectional edges leaving each node. These long range edges are determined at random according to a probability distribution (the augmenting... |
In the Nonnegative Matrix Factorization (NMF) problem we are given an $n \times m$ nonnegative matrix $M$ and an integer $r > 0$. Our goal is to express $M$ as $A W$ where $A$ and $W$ are nonnegative matrices of size $n \times r$ and $r \times m$ respectively. |
Scheduling theory is an old and well-established area in combinatorial optimization, whereas the much younger area of parameterized complexity has only recently gained the attention of the community. Our aim is to bring these two areas closer together by studying the parameterized complexity of a class of single-machi... |
The shortest path problem in graphs is fundamental to AI. Nearly all variants of the problem and relevant algorithms that solve them ignore edge-weight computation time and its common relation to weight uncertainty. |
We present an algorithm for bounding the probability of r-core formation in k-uniform hypergraphs. Understanding the probability of core formation is useful in numerous applications including bounds on the failure rate of Invertible Bloom Lookup Tables (IBLTs) and the probability that a boolean formula is satisfiable. |
Diffusions and related random walk procedures are of central importance in many areas of machine learning, data analysis, and applied mathematics. Because they spread mass agnostically at each step in an iterative manner, they can sometimes spread mass "too aggressively," thereby failing to find the "right... |
Tracking of moving objects is crucial to security systems and networks. Given a graph $G$, terminal vertices $s$ and $t$, and an integer $k$, the \textsc{Tracking Paths} problem asks whether there exists at most $k$ vertices, which if marked as trackers, would ensure that the sequence of trackers encountered in each s... |
Consider the following fundamental learning problem: given input examples $x \in \mathbb{R}^d$ and their vector-valued labels, as defined by an underlying generative neural network, recover the weight matrices of this network. We consider two-layer networks, mapping $\mathbb{R}^d$ to $\mathbb{R}^m$, with $k$ non-linea... |
Joint distribution estimation of a dataset under differential privacy is a fundamental problem for many privacy-focused applications, such as query answering, machine learning tasks and synthetic data generation. In this work, we examine the joint distribution estimation problem given two data points: |
Genome-to-genome comparisons require designating anchor points, which are given by Maximum Exact Matches (MEMs) between their sequences. For large genomes this is a challenging problem and the performance of existing solutions, even in parallel regimes, is not quite satisfactory. |
We consider a variant of the classical Bin Packing Problem, called Fully Dynamic Bin Packing. In this variant, items of a size in $(0,1]$ must be packed in bins of unit size. |
We show that the smoothed complexity of the logarithm of Renegar's condition number is O(log (n/sigma)). |
Estimating the cardinality (number of distinct elements) of a large multiset is a classic problem in streaming and sketching, dating back to Flajolet and Martin's classic Probabilistic Counting (PCSA) algorithm from 1983. In this paper we study the intrinsic tradeoff between the space complexity of the sketch and ... |
We present an accelerated, or 'look-ahead' version of the Newton-Dinkelbach method, a well-known technique for solving fractional and parametric optimization problems. This acceleration halves the Bregman divergence between the current iterate and the optimal solution within every two iterations. |
The performance of many large-scale and data-intensive distributed systems critically depends on the capacity of the interconnecting network. This paper is motivated by the vision of self-adjusting infrastructures whose resources can be adjusted according to the workload they currently serve, in a demand-aware manner.... |
We study the online preemptive scheduling of intervals and jobs (with restarts). Each interval or job has an arrival time, a deadline, a length and a weight. |
We reduce the problem of finding an augmenting path in a general graph to a reachability problem in a directed bipartite graph. A slight modification of depth-first search leads to an algorithm for finding such paths. |
The deletion--contraction algorithm is perhaps the most popular method for computing a host of fundamental graph invariants such as the chromatic, flow, and reliability polynomials in graph theory, the Jones polynomial of an alternating link in knot theory, and the partition functions of the models of Ising, Potts, and... |
Boolean matrix factorization is a natural and a popular technique for summarizing binary matrices. In this paper, we study a problem of Boolean matrix factorization where we additionally require that the factor matrices have consecutive ones property (OBMF). |
Recently it was shown that, if the subtree and chain reduction rules have been applied exhaustively to two unrooted phylogenetic trees, the reduced trees will have at most 15k-9 taxa where k is the TBR (Tree Bisection and Reconnection) distance between the two trees, and that this bound is tight. Here we propose five ... |
We consider space-efficient single-pass estimation of the number of butterflies, a fundamental bipartite graph motif, from a massive bipartite graph stream where each edge represents a connection between entities in two different partitions. We present a space lower bound for any streaming algorithm that can estimate ... |
The problem of constructing optimal factoring automata arises in the context of unification factoring for the efficient execution of logic programs. Given an ordered set of $n$ strings of length $m$, the problem is to construct a trie-like tree structure of minimum size in which the leaves in left-to-right order repre... |
To determine that two given undirected graphs are isomorphic, we construct for them auxiliary graphs, using the breadth-first search. This makes capability to position vertices in each digraph with respect to each other. |
Unbounded SubsetSum is a classical textbook problem: given integers $w_1,w_2,\cdots,w_n\in [1,u],~c,u$, we need to find if there exists $m_1,m_2,\cdots,m_n\in \mathbb{N}$ satisfying $c=\sum_{i=1}^n w_im_i$. In its all-target version, $t\in \mathbb{Z}_+$ is given and answer for all integers $c\in[0,t]$ is required. |
Modularity is one of the most widely used quality measures for graph clusterings. Maximizing modularity is NP-hard, and the runtime of exact algorithms is prohibitive for large graphs. |
We survey $k$-best enumeration problems and the algorithms for solving them, including in particular the problems of finding the $k$ shortest paths, $k$ smallest spanning trees, and $k$ best matchings in weighted graphs. |
Lazy search trees (Sandlund & Wild FOCS 2020, Sandlund & Zhang SODA 2022) are sorted dictionaries whose update and query performance smoothly interpolates between that of efficient priority queues and binary search trees - automatically, depending on actual use; no adjustments are necessary to the data structur... |
We give two new approximation algorithms to compute the fractional hypertree width of an input hypergraph. The first algorithm takes as input $n$-vertex $m$-edge hypergraph $H$ of fractional hypertree width at most $\omega$, runs in polynomial time and produces a tree decomposition of $H$ of fractional hypertree width... |
We give a deterministic algorithm for computing a global minimum vertex cut in a vertex-weighted graph $n$ vertices and $m$ edges in $\widehat O(mn)$ time. This breaks the long-standing $\widehat \Omega(n^{4})$-time barrier in dense graphs, achievable by trivially computing all-pairs maximum flows. |
Experiments are conducted to improve Tokuda (1992) gap sequence in Shellsort into $\gamma$-sequences, and the best result is the gap sequence in which the $k$-th increment $h_k$ is given by \begin{align} h_k=\left\lceil \frac{\gamma^k-1}{\gamma-1} \right\rceil \end{align} , where $\gamma=2.243609061420001.. .$ and $k\i... |
The storage capacity of a graph measures the maximum amount of information that can be stored across its vertices, such that the information at any vertex can be recovered from the information stored at its neighborhood. The study of this graph quantity is motivated by applications in distributed storage and by its in... |
We consider the \emph{Budgeted} version of the classical \emph{Connected Dominating Set} problem (BCDS). Given a graph $G$ and a budget $k$, we seek a connected subset of at most $k$ vertices maximizing the number of dominated vertices in $G$. |
The generalized 2-server problem is an online optimization problem where a sequence of requests has to be served at minimal cost. Requests arrive one by one and need to be served instantly by at least one of two servers. |
A technique introduced by Indyk and Woodruff [STOC 2005] has inspired several recent advances in data-stream algorithms. We show that a number of these results follow easily from the application of a single probabilistic method called Precision Sampling. |
Coloring is a notoriously hard problem, and even more so in the online setting, where each arriving vertex has to be colored immediately and irrevocably. Already on trees, which are trivially two-colorable, it is impossible to achieve anything better than a logarithmic competitive ratio. |
We study very simple sorting algorithms based on a probabilistic comparator model. In our model, errors in comparing two elements are due to (1) the energy or effort put in the comparison and (2) the difference between the compared elements. |
Minimum cuts have been closely related to shortest paths in planar graphs via planar duality - so long as the graphs are undirected. Even maximum flows are closely related to shortest paths for the same reason - so long as the source and the sink are on a common face. |
We present a deterministic oblivious LIFO (Stack), FIFO, double-ended and double-ended priority queue as well as an oblivious mergesort and quicksort algorithm. Our techniques and ideas include concatenating queues end-to-end, size balancing of multiple arrays, several multi-level partitionings of an array. |
We prove that a fractional perfect matching in a non-bipartite graph can be written, in polynomial time, as a convex combination of perfect matchings. This extends the Birkhoff-von Neumann Theorem from bipartite to non-bipartite graphs. |
The correlations and network structure amongst individuals in datasets today---whether explicitly articulated, or deduced from biological or behavioral connections---pose new issues around privacy guarantees, because of inferences that can be made about one individual from another's data. This motivates quantifyin... |
Temporal graphs represent interactions between entities over the time. These interactions may be direct (a contact between two nodes at some time instant), or indirect, through sequences of contacts called temporal paths (journeys). |
One of the central problems in the design of compressed data structures is the efficient support for rank and select queries on bitvectors. These two operations form the backbone of more complex data structures (such as wavelet trees) used for the compact representation of texts, trees, graphs, or grids. |
Given a directed graph $G$ with non negative cost on the arcs, a directed tree cover of $G$ is a rooted directed tree such that either head or tail (or both of them) of every arc in $G$ is touched by $T$. The minimum directed tree cover problem (DTCP) is to find a directed tree cover of minimum cost. |
We consider k mobile agents initially located at distinct nodes of an undirected graph (on n nodes, with edge lengths) that have to deliver a single item from a given source node s to a given target node t. The agents can move along the edges of the graph, starting at time 0 with respect to the following: Each agent i... |
Similarity search is a fundamental algorithmic primitive, widely used in many computer science disciplines. Given a set of points $S$ and a radius parameter $r>0$, the $r$-near neighbor ($r$-NN) problem asks for a data structure that, given any query point $q$, returns a point $p$ within distance at most $r$ from $... |
The number of the non-shared edges of two phylogenies is a basic measure of the dissimilarity between the phylogenies. The non-shared edges are also the building block for approximating a more sophisticated metric called the nearest neighbor interchange (NNI) distance. |
In the $L_0$ Fitting Tree Metrics problem, we are given all pairwise distances among the elements of a set $V$ and our output is a tree metric on $V$. The goal is to minimize the number of pairwise distance disagreements between the input and the output. |
Binary relations are commonly used in Computer Science for modeling data. In addition to classical representations using matrices or lists, some compressed data structures have recently been proposed to represent binary relations in compact space, such as the $k^2$-tree and the Binary Relation Wavelet Tree (BRWT). |
Weighted equitable partitioning of a graph has been of interest lately due to several applications, including redistricting, network algorithms, and image decomposition. Weighting a partition according to the spanning-tree metric has been of mathematical and practical interest because it typically favors partitions wi... |
We study multi-budgeted variants of the classic minimum cut problem and graph separation problems that turned out to be important in parameterized complexity: Skew Multicut and Directed Feedback Arc Set. In our generalization, we assign colors $1,2,...,\ell$ to some edges and give separate budgets $k_{1},k_{2},...,k_{... |
In sphere of research of discrete optimization algorithms efficiency the important place occupies a method of polynomial reducibility of some problems to others with use of special purpose components. In this paper a novel method of compact representation for sets of binary sequences in the form of "compact triple... |
Let G=(V,E)(|V|=n and |E|=m) be an undirected graph with positive edge weights. Let P_{G}(s, t) be a shortest s-t path in G. Let l be the number of edges in P_{G}(s, t). |
Local samplers are algorithms that generate random samples based on local queries to high-dimensional distributions, ensuring the samples follow the correct induced distributions while maintaining time complexity that scales locally with the query size. These samplers have broad applications, including deterministic a... |
In most online problems with delay, clairvoyance (i.e. knowing the future delay of a request upon its arrival) is required for polylogarithmic competitiveness. In this paper, we show that this is not the case for set cover with delay (SCD) -- specifically, we present the first non-clairvoyant algorithm, which is $O(\l... |
In the present note we prove an asymptotically tight relation between additive and multiplicative complexity of Boolean functions with respect to implementation by circuits over the basis {+,*,1}. |
A Lyndon word is a primitive string which is lexicographically smallest among cyclic permutations of its characters. Lyndon words are used for constructing bases in free Lie algebras, constructing de Bruijn sequences, finding the lexicographically smallest or largest substring in a string, and succinct suffix-prefix m... |
This paper develops two heuristic algorithms to solve graph isomorphism, using free energy encoding. The first algorithm uses four types of encoding refinement techniques such that every graph can be distinguished by a canonical number computed by the algorithm. |
We revisit the topic of polynomial kernels for Vertex Cover relative to structural parameters. Our starting point is a recent paper due to Fomin and Strømme [WG 2016] who gave a kernel with $\mathcal{O}(|X|^{12})$ vertices when $X$ is a vertex set such that each connected component of $G-X$ contains at most one cycle,... |
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