HoloDopplerSegISBI / dataset.py
noTban's picture
First commit : scripted train/test split with README
79854cf
import os
from datasets import DatasetBuilder, DatasetInfo, SplitGenerator, Split, Features, Value
class DopplerRetina(DatasetBuilder):
VERSION = "1.0.0"
def _info(self):
return DatasetInfo(
description="Retinal Doppler artery/vein segmentation dataset",
features=Features({
"measure_id": Value("string"),
"m0": Value("string"),
"correlation": Value("string"),
"diasys": Value("string"),
"artery_mask": Value("string"),
"vein_mask": Value("string"),
}),
)
def _split_generators(self, dl_manager):
repo_dir = dl_manager.download_and_extract(self.base_path)
return [
SplitGenerator(
name=Split.TRAIN,
gen_kwargs={"path": os.path.join(repo_dir, "train")},
),
SplitGenerator(
name=Split.TEST,
gen_kwargs={"path": os.path.join(repo_dir, "test")},
),
]
def _generate_examples(self, path):
for measure in sorted(os.listdir(path)):
mdir = os.path.join(path, measure)
if not os.path.isdir(mdir):
continue
yield measure, {
"measure_id": measure,
"m0": os.path.join(mdir, "M0.png"),
"correlation": os.path.join(mdir, "correlation.png"),
"diasys": os.path.join(mdir, "diasys.png"),
"artery_mask": os.path.join(mdir, "maskArtery.png"),
"vein_mask": os.path.join(mdir, "maskVein.png"),
}