Delete loading script
Browse files- MORFITT.py +0 -106
MORFITT.py
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import os
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import json
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import random
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import datasets
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import numpy as np
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import pandas as pd
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_CITATION = """\
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ddd
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"""
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_DESCRIPTION = """\
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ddd
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"""
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_HOMEPAGE = "ddd"
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_URL = "https://huggingface.co/datasets/Dr-BERT/MORFITT/resolve/main/data.zip"
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_LICENSE = "unknown"
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_SPECIALITIES = ['microbiology', 'etiology', 'virology', 'physiology', 'immunology', 'parasitology', 'genetics', 'chemistry', 'veterinary', 'surgery', 'pharmacology', 'psychology']
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class MORFITT(datasets.GeneratorBasedBuilder):
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DEFAULT_CONFIG_NAME = "source"
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BUILDER_CONFIGS = [
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datasets.BuilderConfig(name="source", version="1.0.0", description="The MORFITT corpora"),
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]
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def _info(self):
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features = datasets.Features(
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{
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"id": datasets.Value("string"),
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"abstract": datasets.Value("string"),
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"specialities": datasets.Sequence(
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datasets.features.ClassLabel(names=_SPECIALITIES),
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),
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"specialities_one_hot": datasets.Sequence(
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datasets.Value("float"),
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),
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}
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)
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return datasets.DatasetInfo(
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description=_DESCRIPTION,
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features=features,
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supervised_keys=None,
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homepage=_HOMEPAGE,
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license=str(_LICENSE),
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citation=_CITATION,
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)
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def _split_generators(self, dl_manager):
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data_dir = dl_manager.download_and_extract(_URL).rstrip("/")
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return [
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datasets.SplitGenerator(
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name=datasets.Split.TRAIN,
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gen_kwargs={
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"tsv_file": data_dir + "/train.tsv",
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"split": "train",
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},
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),
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datasets.SplitGenerator(
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name=datasets.Split.VALIDATION,
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gen_kwargs={
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"tsv_file": data_dir + "/dev.tsv",
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"split": "validation",
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},
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),
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datasets.SplitGenerator(
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name=datasets.Split.TEST,
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gen_kwargs={
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"tsv_file": data_dir + "/test.tsv",
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"split": "test",
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},
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),
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]
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def _generate_examples(self, tsv_file, split):
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# Load TSV file
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df = pd.read_csv(tsv_file, sep="\t")
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for index, e in df.iterrows():
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specialities = e["specialities"].split("|")
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# Empty one hot vector
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one_hot = [0.0 for i in _SPECIALITIES]
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# Fill up the one hot vector
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for s in specialities:
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one_hot[_SPECIALITIES.index(s)] = 1.0
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yield e["identifier"], {
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"id": e["identifier"],
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"abstract": e["abstract"],
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"specialities": specialities,
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"specialities_one_hot": one_hot,
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}
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