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9f75bdf
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1 Parent(s): 61bb45f

Delete loading script

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  1. MORFITT.py +0 -106
MORFITT.py DELETED
@@ -1,106 +0,0 @@
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- import os
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- import json
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- import random
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-
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- import datasets
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- import numpy as np
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- import pandas as pd
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-
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- _CITATION = """\
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- ddd
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- """
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-
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- _DESCRIPTION = """\
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- ddd
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- """
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-
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- _HOMEPAGE = "ddd"
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-
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- _URL = "https://huggingface.co/datasets/Dr-BERT/MORFITT/resolve/main/data.zip"
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-
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- _LICENSE = "unknown"
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-
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- _SPECIALITIES = ['microbiology', 'etiology', 'virology', 'physiology', 'immunology', 'parasitology', 'genetics', 'chemistry', 'veterinary', 'surgery', 'pharmacology', 'psychology']
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-
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- class MORFITT(datasets.GeneratorBasedBuilder):
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-
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- DEFAULT_CONFIG_NAME = "source"
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-
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- BUILDER_CONFIGS = [
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- datasets.BuilderConfig(name="source", version="1.0.0", description="The MORFITT corpora"),
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- ]
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-
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- def _info(self):
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-
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- features = datasets.Features(
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- {
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- "id": datasets.Value("string"),
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- "abstract": datasets.Value("string"),
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- "specialities": datasets.Sequence(
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- datasets.features.ClassLabel(names=_SPECIALITIES),
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- ),
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- "specialities_one_hot": datasets.Sequence(
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- datasets.Value("float"),
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- ),
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- }
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- )
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-
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- return datasets.DatasetInfo(
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- description=_DESCRIPTION,
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- features=features,
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- supervised_keys=None,
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- homepage=_HOMEPAGE,
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- license=str(_LICENSE),
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- citation=_CITATION,
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- )
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-
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- def _split_generators(self, dl_manager):
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-
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- data_dir = dl_manager.download_and_extract(_URL).rstrip("/")
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-
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- return [
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- datasets.SplitGenerator(
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- name=datasets.Split.TRAIN,
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- gen_kwargs={
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- "tsv_file": data_dir + "/train.tsv",
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- "split": "train",
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- },
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- ),
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- datasets.SplitGenerator(
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- name=datasets.Split.VALIDATION,
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- gen_kwargs={
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- "tsv_file": data_dir + "/dev.tsv",
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- "split": "validation",
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- },
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- ),
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- datasets.SplitGenerator(
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- name=datasets.Split.TEST,
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- gen_kwargs={
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- "tsv_file": data_dir + "/test.tsv",
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- "split": "test",
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- },
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- ),
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- ]
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-
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- def _generate_examples(self, tsv_file, split):
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-
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- # Load TSV file
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- df = pd.read_csv(tsv_file, sep="\t")
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-
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- for index, e in df.iterrows():
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-
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- specialities = e["specialities"].split("|")
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-
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- # Empty one hot vector
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- one_hot = [0.0 for i in _SPECIALITIES]
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-
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- # Fill up the one hot vector
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- for s in specialities:
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- one_hot[_SPECIALITIES.index(s)] = 1.0
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-
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- yield e["identifier"], {
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- "id": e["identifier"],
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- "abstract": e["abstract"],
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- "specialities": specialities,
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- "specialities_one_hot": one_hot,
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- }