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https://api.github.com/repos/huggingface/datasets/issues/5598 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5598/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5598/comments | https://api.github.com/repos/huggingface/datasets/issues/5598/events | https://github.com/huggingface/datasets/pull/5598 | 1,605,018,478 | PR_kwDODunzps5LCMiX | 5,598 | Fix push_to_hub with no dataset_infos | {
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"_The documentation is not available anymore as the PR was closed or merged._",
"<details>\n<summary>Show benchmarks</summary>\n\nPyArrow==6.0.0\n\n<details>\n<summary>Show updated benchmarks!</summary>\n\n### Benchmark: benchmark_array_xd.json\n\n| metric | read_batch_formatted_as_numpy after write_array2d | rea... | 2023-03-01T13:54:06 | 2023-03-02T13:47:13 | 2023-03-02T13:40:17 | MEMBER | null | false | {
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} | As reported in https://github.com/vijaydwivedi75/lrgb/issues/10, `push_to_hub` fails if the remote repository already exists and has a README.md without `dataset_info` in the YAML tags
cc @clefourrier | {
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https://api.github.com/repos/huggingface/datasets/issues/5597 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5597/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5597/comments | https://api.github.com/repos/huggingface/datasets/issues/5597/events | https://github.com/huggingface/datasets/issues/5597 | 1,604,928,721 | I_kwDODunzps5fqUTR | 5,597 | in-place dataset update | {
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"We won't support in-place modifications since `datasets` is based on the Apache Arrow format which doesn't support in-place modifications.\r\n\r\nIn your case the old dataset is garbage collected pretty quickly so you won't have memory issues.\r\n\r\nNote that datasets loaded from disk (memory mapped) are not load... | 2023-03-01T12:58:18 | 2023-03-02T13:30:41 | 2023-03-02T03:47:00 | NONE | null | null | null | ### Motivation
For the circumstance that I creat an empty `Dataset` and keep appending new rows into it, I found that it leads to creating a new dataset at each call. It looks quite memory-consuming. I just wonder if there is any more efficient way to do this.
```python
from datasets import Dataset
ds = Dataset.from_list([])
ds.add_item({'a': [1, 2, 3], 'b': 4})
print(ds)
>>> Dataset({
>>> features: [],
>>> num_rows: 0
>>> })
ds = ds.add_item({'a': [1, 2, 3], 'b': 4})
print(ds)
>>> Dataset({
>>> features: ['a', 'b'],
>>> num_rows: 1
>>> })
```
### Feature request
Call for in-place dataset update functions, that update the existing `Dataset` in place without creating a new copy. The interface is supposed to keep the same style as PyTorch, such as the in-place version of a `function` is named `function_`. For example, the in-pace version of `add_item`, i.e., `add_item_`, immediately updates the `Dataset`.
```python
from datasets import Dataset
ds = Dataset.from_list([])
ds.add_item({'a': [1, 2, 3], 'b': 4})
print(ds)
>>> Dataset({
>>> features: [],
>>> num_rows: 0
>>> })
ds.add_item_({'a': [1, 2, 3], 'b': 4})
print(ds)
>>> Dataset({
>>> features: ['a', 'b'],
>>> num_rows: 1
>>> })
```
### Related Functions
* `.map`
* `.filter`
* `.add_item` | {
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https://api.github.com/repos/huggingface/datasets/issues/5596 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5596/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5596/comments | https://api.github.com/repos/huggingface/datasets/issues/5596/events | https://github.com/huggingface/datasets/issues/5596 | 1,604,919,993 | I_kwDODunzps5fqSK5 | 5,596 | [TypeError: Couldn't cast array of type] Can only load a subset of the dataset | {
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"Apparently some JSON objects have a `\"labels\"` field. Since this field is not present in every object, you must specify all the fields types in the README.md\r\n\r\nEDIT: actually specifying the feature types doesn’t solve the issue, it raises an error because “labels” is missing in the data",
"We've updated t... | 2023-03-01T12:53:08 | 2023-04-19T10:19:37 | 2023-03-02T11:12:11 | NONE | null | null | null | ### Describe the bug
I'm trying to load this [dataset](https://huggingface.co/datasets/bigcode-data/the-stack-gh-issues) which consists of jsonl files and I get the following error:
```
casted_values = _c(array.values, feature[0])
File "/opt/conda/lib/python3.7/site-packages/datasets/table.py", line 1839, in wrapper
return func(array, *args, **kwargs)
File "/opt/conda/lib/python3.7/site-packages/datasets/table.py", line 2132, in cast_array_to_feature
raise TypeError(f"Couldn't cast array of type\n{array.type}\nto\n{feature}")
TypeError: Couldn't cast array of type
struct<type: string, action: string, datetime: timestamp[s], author: string, title: string, description: string, comment_id: int64, comment: string, labels: list<item: string>>
to
{'type': Value(dtype='string', id=None), 'action': Value(dtype='string', id=None), 'datetime': Value(dtype='timestamp[s]', id=None), 'author': Value(dtype='string', id=None), 'title': Value(dtype='string', id=None), 'description': Value(dtype='string', id=None), 'comment_id': Value(dtype='int64', id=None), 'comment': Value(dtype='string', id=None)}
```
But I can succesfully load a subset of the dataset, for example this works:
```python
ds = load_dataset('bigcode-data/the-stack-gh-issues', split="train", data_files=[f"data/data-{x}.jsonl" for x in range(10)])
```
and `ds.features` returns:
```
{'repo': Value(dtype='string', id=None),
'org': Value(dtype='string', id=None),
'issue_id': Value(dtype='int64', id=None),
'issue_number': Value(dtype='int64', id=None),
'pull_request': {'user_login': Value(dtype='string', id=None),
'repo': Value(dtype='string', id=None),
'number': Value(dtype='int64', id=None)},
'events': [{'type': Value(dtype='string', id=None),
'action': Value(dtype='string', id=None),
'datetime': Value(dtype='timestamp[s]', id=None),
'author': Value(dtype='string', id=None),
'title': Value(dtype='string', id=None),
'description': Value(dtype='string', id=None),
'comment_id': Value(dtype='int64', id=None),
'comment': Value(dtype='string', id=None)}]}
```
So I'm not sure if there's an issue with just some of the files. Grateful if you have any suggestions to fix the issue.
Side note:
I saw this related [issue](https://github.com/huggingface/datasets/issues/3637) and tried to write a loading script to have `events` as a `Sequence` and not `list` [here](https://huggingface.co/datasets/bigcode-data/the-stack-gh-issues/blob/main/loading.py) (the script was renamed). It worked with a subset locally but doesn't for the remote dataset it can't find https://huggingface.co/datasets/bigcode-data/the-stack-gh-issues/resolve/main/data.
### Steps to reproduce the bug
```python
from datasets import load_dataset
ds = load_dataset('bigcode-data/the-stack-gh-issues', split="train")
```
### Expected behavior
Load the entire dataset succesfully.
### Environment info
- `datasets` version: 2.10.1
- Platform: Linux-4.19.0-23-cloud-amd64-x86_64-with-debian-10.13
- Python version: 3.7.12
- PyArrow version: 9.0.0
- Pandas version: 1.3.4 | {
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https://api.github.com/repos/huggingface/datasets/issues/5595 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5595/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5595/comments | https://api.github.com/repos/huggingface/datasets/issues/5595/events | https://github.com/huggingface/datasets/pull/5595 | 1,604,070,629 | PR_kwDODunzps5K--V9 | 5,595 | Unpins sqlAlchemy | {
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"The docs for this PR live [here](https://moon-ci-docs.huggingface.co/docs/datasets/pr_5595). All of your documentation changes will be reflected on that endpoint.",
"It looks like this issue hasn't been fixed yet, so let's wait a bit more.",
"@lazarust thanks for your work, but unfortunately we cannot merge it... | 2023-03-01T01:33:45 | 2023-04-04T08:20:19 | 2023-04-04T08:19:14 | NONE | null | false | {
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} | Closes #5477 | {
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https://api.github.com/repos/huggingface/datasets/issues/5592 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5592/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5592/comments | https://api.github.com/repos/huggingface/datasets/issues/5592/events | https://github.com/huggingface/datasets/pull/5592 | 1,603,619,124 | PR_kwDODunzps5K9dWr | 5,592 | Fix docstring example | {
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"_The documentation is not available anymore as the PR was closed or merged._",
"<details>\n<summary>Show benchmarks</summary>\n\nPyArrow==6.0.0\n\n<details>\n<summary>Show updated benchmarks!</summary>\n\n### Benchmark: benchmark_array_xd.json\n\n| metric | read_batch_formatted_as_numpy after write_array2d | rea... | 2023-02-28T18:42:37 | 2023-02-28T19:26:33 | 2023-02-28T19:19:15 | MEMBER | null | false | {
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} | Fixes #5581 to use the correct output for the `set_format` method. | {
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https://api.github.com/repos/huggingface/datasets/issues/5591 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5591/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5591/comments | https://api.github.com/repos/huggingface/datasets/issues/5591/events | https://github.com/huggingface/datasets/pull/5591 | 1,603,571,407 | PR_kwDODunzps5K9S79 | 5,591 | set dev version | {
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"<details>\n<summary>Show benchmarks</summary>\n\nPyArrow==6.0.0\n\n<details>\n<summary>Show updated benchmarks!</summary>\n\n### Benchmark: benchmark_array_xd.json\n\n| metric | read_batch_formatted_as_numpy after write_array2d | read_batch_formatted_as_numpy after write_flattened_sequence | read_batch_formatted_a... | 2023-02-28T17:58:11 | 2023-02-28T18:16:27 | 2023-02-28T18:06:08 | MEMBER | null | false | {
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https://api.github.com/repos/huggingface/datasets/issues/5589 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5589/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5589/comments | https://api.github.com/repos/huggingface/datasets/issues/5589/events | https://github.com/huggingface/datasets/pull/5589 | 1,603,535,704 | PR_kwDODunzps5K9K1i | 5,589 | Revert "pass the dataset features to the IterableDataset.from_generator" | {
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"_The documentation is not available anymore as the PR was closed or merged._",
"<details>\n<summary>Show benchmarks</summary>\n\nPyArrow==6.0.0\n\n<details>\n<summary>Show updated benchmarks!</summary>\n\n### Benchmark: benchmark_array_xd.json\n\n| metric | read_batch_formatted_as_numpy after write_array2d | rea... | 2023-02-28T17:52:04 | 2023-03-21T14:21:45 | 2023-03-21T14:18:18 | MEMBER | null | false | {
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} | This reverts commit b91070b9c09673e2e148eec458036ab6a62ac042 (temporarily)
It hurts iterable dataset performance a lot (e.g. x4 slower because it encodes+decodes images unnecessarily). I think we need to fix this before re-adding it
cc @mariosasko @Hubert-Bonisseur | {
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"<details>\n<summary>Show benchmarks</summary>\n\nPyArrow==6.0.0\n\n<details>\n<summary>Show updated benchmarks!</summary>\n\n### Benchmark: benchmark_array_xd.json\n\n| metric | read_batch_formatted_as_numpy after write_array2d | read_batch_formatted_as_numpy after write_flattened_sequence | read_batch_formatted_a... | 2023-02-28T15:37:46 | 2023-02-28T17:28:35 | 2023-02-28T17:21:17 | CONTRIBUTOR | null | false | {
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} | Flatten a dataset on the fly in `save_to_disk` instead of doing it with `flatten_indices` to avoid creating an additional cache file.
(this is one of the sub-tasks in https://github.com/huggingface/datasets/issues/5507) | {
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https://api.github.com/repos/huggingface/datasets/issues/5587 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5587/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5587/comments | https://api.github.com/repos/huggingface/datasets/issues/5587/events | https://github.com/huggingface/datasets/pull/5587 | 1,603,139,420 | PR_kwDODunzps5K70pp | 5,587 | Fix `sort` with indices mapping | {
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"<details>\n<summary>Show benchmarks</summary>\n\nPyArrow==6.0.0\n\n<details>\n<summary>Show updated benchmarks!</summary>\n\n### Benchmark: benchmark_array_xd.json\n\n| metric | read_batch_formatted_as_numpy after write_array2d | read_batch_formatted_as_numpy after write_flattened_sequence | read_batch_formatted_a... | 2023-02-28T14:05:08 | 2023-02-28T17:28:57 | 2023-02-28T17:21:58 | CONTRIBUTOR | null | false | {
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} | Fixes the `key` range in the `query_table` call in `sort` to account for an indices mapping
Fix #5586 | {
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https://api.github.com/repos/huggingface/datasets/issues/5586 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5586/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5586/comments | https://api.github.com/repos/huggingface/datasets/issues/5586/events | https://github.com/huggingface/datasets/issues/5586 | 1,602,961,544 | I_kwDODunzps5fi0CI | 5,586 | .sort() is broken when used after .filter(), only in 2.10.0 | {
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"Thanks for reporting and thanks @mariosasko for fixing ! We just did a patch release `2.10.1` with the fix"
] | 2023-02-28T12:18:09 | 2023-02-28T18:17:26 | 2023-02-28T17:21:59 | NONE | null | null | null | ### Describe the bug
Hi, thank you for your support!
It seems like the addition of multiple key sort (#5502) in 2.10.0 broke the `.sort()` method.
After filtering a dataset with `.filter()`, the `.sort()` seems to refer to the query_table index of the previous unfiltered dataset, resulting in an IndexError.
This only happens with the 2.10.0 release.
### Steps to reproduce the bug
```Python
from datasets import load_dataset
# dataset with length of 1104
ds = load_dataset('glue', 'ax')['test']
ds = ds.filter(lambda x: x['idx'] > 1100)
ds.sort('premise')
print('Done')
```
File "/home/dongkeun/datasets_test/test.py", line 5, in <module>
ds.sort('premise')
File "/home/dongkeun/miniconda3/envs/datasets_test/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 528, in wrapper
out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
File "/home/dongkeun/miniconda3/envs/datasets_test/lib/python3.9/site-packages/datasets/fingerprint.py", line 511, in wrapper
out = func(dataset, *args, **kwargs)
File "/home/dongkeun/miniconda3/envs/datasets_test/lib/python3.9/site-packages/datasets/arrow_dataset.py", line 3959, in sort
sort_table = query_table(
File "/home/dongkeun/miniconda3/envs/datasets_test/lib/python3.9/site-packages/datasets/formatting/formatting.py", line 588, in query_table
_check_valid_index_key(key, size)
File "/home/dongkeun/miniconda3/envs/datasets_test/lib/python3.9/site-packages/datasets/formatting/formatting.py", line 537, in _check_valid_index_key
_check_valid_index_key(max(key), size=size)
File "/home/dongkeun/miniconda3/envs/datasets_test/lib/python3.9/site-packages/datasets/formatting/formatting.py", line 531, in _check_valid_index_key
raise IndexError(f"Invalid key: {key} is out of bounds for size {size}")
IndexError: Invalid key: 1103 is out of bounds for size 3
### Expected behavior
It should sort the dataset and print "Done". Which it does on 2.9.0.
### Environment info
- `datasets` version: 2.10.0
- Platform: Linux-5.15.0-41-generic-x86_64-with-glibc2.31
- Python version: 3.9.16
- PyArrow version: 11.0.0
- Pandas version: 1.5.3 | {
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https://api.github.com/repos/huggingface/datasets/issues/5585 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5585/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5585/comments | https://api.github.com/repos/huggingface/datasets/issues/5585/events | https://github.com/huggingface/datasets/issues/5585 | 1,602,190,030 | I_kwDODunzps5ff3rO | 5,585 | Cache is not transportable | {
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"Hi ! No the cache is not transportable in general. It will work on a shared filesystem if you use the same python environment, but not across machines/os/environments.\r\n\r\nIn particular, reloading cached datasets does work, but reloading cached processed datasets (e.g. from `map`) may not work. This is because ... | 2023-02-28T00:53:06 | 2023-02-28T21:26:52 | 2023-02-28T21:26:52 | NONE | null | null | null | ### Describe the bug
I would like to share cache between two machines (a Windows host machine and a WSL instance).
I run most my code in WSL. I have just run out of space in the virtual drive. Rather than expand the drive size, I plan to move to cache to the host Windows machine, thereby sharing the downloads.
I'm hoping that I can just copy/paste the cache files, but I notice that a lot of the file names start with the path name, e.g. `_home_davidg_.cache_huggingface_datasets_conll2003_default-451...98.lock` where `home/davidg` is where the cache is in WSL.
This seems to suggest that the cache is not portable/cannot be centralised or shared. Is this the case, or are the files that start with path names not integral to the caching mechanism? Because copying the cache files _seems_ to work, but I'm not filled with confidence that something isn't going to break.
A related issue, when trying to load a dataset that should come from cache (running in WSL, pointing to cache on the Windows host) it seemed to work fine, but it still uses a WSL directory for `.cache\huggingface\modules\datasets_modules`. I see nothing in the docs about this, or how to point it to a different place.
I have asked a related question on the forum: https://discuss.huggingface.co/t/is-datasets-cache-operating-system-agnostic/32656
### Steps to reproduce the bug
View the cache directory in WSL/Windows.
### Expected behavior
Cache can be shared between (virtual) machines and be transportable.
It would be nice to have a simple way to say "Dear Hugging Face packages, please put ALL your cache in `blah/de/blah`" and have all the Hugging Face packages respect that single location.
### Environment info
```
- `datasets` version: 2.9.0
- Platform: Linux-5.10.102.1-microsoft-standard-WSL2-x86_64-with-glibc2.31
- Python version: 3.10.8
- PyArrow version: 11.0.0
- Pandas version: 1.5.3
- ``` | {
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https://api.github.com/repos/huggingface/datasets/issues/5584 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/5584/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/5584/comments | https://api.github.com/repos/huggingface/datasets/issues/5584/events | https://github.com/huggingface/datasets/issues/5584 | 1,601,821,808 | I_kwDODunzps5fedxw | 5,584 | Unable to load coyo700M dataset | {
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"Hi @manuaero \r\n\r\nThank you for your interest in the COYO dataset.\r\n\r\nOur dataset provides the img-url and alt-text in the form of a parquet, so to utilize the coyo dataset you will need to download it directly.\r\n\r\nWe provide a [guide](https://github.com/kakaobrain/coyo-dataset/blob/main/download/README... | 2023-02-27T19:35:03 | 2023-02-28T07:27:59 | 2023-02-28T07:27:58 | NONE | null | null | null | ### Describe the bug
Seeing this error when downloading https://huggingface.co/datasets/kakaobrain/coyo-700m:
```ArrowInvalid: Parquet magic bytes not found in footer. Either the file is corrupted or this is not a parquet file.```
Full stack trace
```Downloading and preparing dataset parquet/kakaobrain--coyo-700m to /root/.cache/huggingface/datasets/kakaobrain___parquet/kakaobrain--coyo-700m-ae729692ae3e0073/0.0.0/2a3b91fbd88a2c90d1dbbb32b460cf621d31bd5b05b934492fdef7d8d6f236ec...
Downloading data files: 100%
1/1 [00:00<00:00, 63.35it/s]
Extracting data files: 100%
1/1 [00:00<00:00, 5.00it/s]
---------------------------------------------------------------------------
ArrowInvalid Traceback (most recent call last)
[/usr/local/lib/python3.8/dist-packages/datasets/builder.py](https://localhost:8080/#) in _prepare_split_single(self, gen_kwargs, fpath, file_format, max_shard_size, job_id)
1859 _time = time.time()
-> 1860 for _, table in generator:
1861 if max_shard_size is not None and writer._num_bytes > max_shard_size:
9 frames
ArrowInvalid: Parquet magic bytes not found in footer. Either the file is corrupted or this is not a parquet file.
The above exception was the direct cause of the following exception:
DatasetGenerationError Traceback (most recent call last)
[/usr/local/lib/python3.8/dist-packages/datasets/builder.py](https://localhost:8080/#) in _prepare_split_single(self, gen_kwargs, fpath, file_format, max_shard_size, job_id)
1890 if isinstance(e, SchemaInferenceError) and e.__context__ is not None:
1891 e = e.__context__
-> 1892 raise DatasetGenerationError("An error occurred while generating the dataset") from e
1893
1894 yield job_id, True, (total_num_examples, total_num_bytes, writer._features, num_shards, shard_lengths)
DatasetGenerationError: An error occurred while generating the dataset```
### Steps to reproduce the bug
```
from datasets import load_dataset
hf_dataset = load_dataset("kakaobrain/coyo-700m")
```
### Expected behavior
The above commands load the dataset successfully. Or handles exception and continue loading the remainder.
### Environment info
colab. any | {
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"_The documentation is not available anymore as the PR was closed or merged._",
"<details>\n<summary>Show benchmarks</summary>\n\nPyArrow==6.0.0\n\n<details>\n<summary>Show updated benchmarks!</summary>\n\n### Benchmark: benchmark_array_xd.json\n\n| metric | read_batch_formatted_as_numpy after write_array2d | rea... | 2023-02-27T17:04:46 | 2023-02-28T13:52:15 | 2023-02-28T13:44:04 | CONTRIBUTOR | null | false | {
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} | Ensures all the writers that use Pandas for conversion (JSON, CSV, SQL) do not export `index` by default (https://github.com/huggingface/datasets/pull/5490 only did this for CSV) | {
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"_The documentation is not available anymore as the PR was closed or merged._",
"<details>\n<summary>Show benchmarks</summary>\n\nPyArrow==8.0.0\n\n<details>\n<summary>Show updated benchmarks!</summary>\n\n### Benchmark: benchmark_array_xd.json\n\n| metric | read_batch_formatted_as_numpy after write_array2d | rea... | 2023-02-27T10:50:07 | 2023-03-13T19:10:22 | 2023-03-13T19:03:32 | CONTRIBUTOR | null | false | {
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} | This PR closes #5383
* Add column_names property to IterableDataset
* Add multiple tests for this new property | {
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