id stringlengths 9 104 | author stringlengths 3 36 | task_category stringclasses 32
values | tags sequencelengths 1 4.05k | created_time timestamp[s]date 2022-03-02 23:29:04 2025-04-10 08:38:38 | last_modified timestamp[s]date 2021-02-13 00:06:56 2025-04-18 02:54:43 | downloads int64 0 15.6M | likes int64 0 4.86k | README stringlengths 44 1.01M | matched_bigbio_names sequencelengths 1 8 | is_bionlp stringclasses 3
values | model_cards stringlengths 0 1M | metadata stringlengths 2 698k |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
Baiming123/Calcu_Disease_Similarity | Baiming123 | sentence-similarity | [
"sentence-transformers",
"pytorch",
"bert",
"sentence-similarity",
"dataset:Baiming123/MeSHDS",
"base_model:sentence-transformers/multi-qa-MiniLM-L6-cos-v1",
"base_model:finetune:sentence-transformers/multi-qa-MiniLM-L6-cos-v1",
"doi:10.57967/hf/3108",
"autotrain_compatible",
"text-embeddings-infe... | 2024-09-20T15:58:13 | 2024-12-14T10:10:29 | 0 | 3 | ---
base_model:
- sentence-transformers/multi-qa-MiniLM-L6-cos-v1
datasets:
- Baiming123/MeSHDS
pipeline_tag: sentence-similarity
tags:
- sentence-transformers
- sentence-similarity
---
# Model Description
This is a [sentence-transformers](https://www.SBERT.net) model: It maps sentences & paragraphs to a 384 dimensio... | [
"MIRNA"
] | BioNLP |
# Model Description
This is a [sentence-transformers](https://www.SBERT.net) model: It maps sentences & paragraphs to a 384 dimensional dense vector space and can be used for tasks like clustering or semantic search.The 'Calcu_Disease_Similarity' model is designed to encode two disease terms and compute their **seman... | {"base_model": ["sentence-transformers/multi-qa-MiniLM-L6-cos-v1"], "datasets": ["Baiming123/MeSHDS"], "pipeline_tag": "sentence-similarity", "tags": ["sentence-transformers", "sentence-similarity"]} |
johnsnowlabs/JSL-MedMNX-7B-SFT | johnsnowlabs | text-generation | [
"transformers",
"safetensors",
"mistral",
"text-generation",
"reward model",
"RLHF",
"medical",
"conversational",
"en",
"license:cc-by-nc-nd-4.0",
"autotrain_compatible",
"text-generation-inference",
"endpoints_compatible",
"region:us"
] | 2024-04-16T05:27:20 | 2024-04-18T19:25:47 | 2,926 | 3 | ---
language:
- en
library_name: transformers
license: cc-by-nc-nd-4.0
tags:
- reward model
- RLHF
- medical
---
# JSL-MedMNX-7B-SFT
[<img src="https://repository-images.githubusercontent.com/104670986/2e728700-ace4-11ea-9cfc-f3e060b25ddf">](http://www.johnsnowlabs.com)
JSL-MedMNX-7B-SFT is a 7 Billion parameter mod... | [
"MEDQA",
"PUBMEDQA"
] | BioNLP |
# JSL-MedMNX-7B-SFT
[<img src="https://repository-images.githubusercontent.com/104670986/2e728700-ace4-11ea-9cfc-f3e060b25ddf">](http://www.johnsnowlabs.com)
JSL-MedMNX-7B-SFT is a 7 Billion parameter model developed by [John Snow Labs](https://www.johnsnowlabs.com/).
This model is SFT-finetuned on alpaca format 11... | {"language": ["en"], "library_name": "transformers", "license": "cc-by-nc-nd-4.0", "tags": ["reward model", "RLHF", "medical"]} |
RichardErkhov/HPAI-BSC_-_Llama3-Aloe-8B-Alpha-gguf | RichardErkhov | null | [
"gguf",
"arxiv:2405.01886",
"endpoints_compatible",
"region:us",
"conversational"
] | 2024-10-30T11:14:53 | 2024-10-30T15:06:18 | 75 | 0 | ---
{}
---
Quantization made by Richard Erkhov.
[Github](https://github.com/RichardErkhov)
[Discord](https://discord.gg/pvy7H8DZMG)
[Request more models](https://github.com/RichardErkhov/quant_request)
Llama3-Aloe-8B-Alpha - GGUF
- Model creator: https://huggingface.co/HPAI-BSC/
- Original model: https://huggingfa... | [
"MEDQA",
"PUBMEDQA"
] | BioNLP | Quantization made by Richard Erkhov.
[Github](https://github.com/RichardErkhov)
[Discord](https://discord.gg/pvy7H8DZMG)
[Request more models](https://github.com/RichardErkhov/quant_request)
Llama3-Aloe-8B-Alpha - GGUF
- Model creator: https://huggingface.co/HPAI-BSC/
- Original model: https://huggingface.co/HPAI-... | {} |
Rodrigo1771/bsc-bio-ehr-es-symptemist-word2vec-85-ner | Rodrigo1771 | token-classification | [
"transformers",
"tensorboard",
"safetensors",
"roberta",
"token-classification",
"generated_from_trainer",
"dataset:Rodrigo1771/symptemist-85-ner",
"base_model:PlanTL-GOB-ES/bsc-bio-ehr-es",
"base_model:finetune:PlanTL-GOB-ES/bsc-bio-ehr-es",
"license:apache-2.0",
"model-index",
"autotrain_com... | 2024-09-04T19:00:28 | 2024-09-04T19:11:15 | 13 | 0 | ---
base_model: PlanTL-GOB-ES/bsc-bio-ehr-es
datasets:
- Rodrigo1771/symptemist-85-ner
library_name: transformers
license: apache-2.0
metrics:
- precision
- recall
- f1
- accuracy
tags:
- token-classification
- generated_from_trainer
model-index:
- name: output
results:
- task:
type: token-classification
... | [
"SYMPTEMIST"
] | BioNLP |
<!-- This model card has been generated automatically according to the information the Trainer had access to. You
should probably proofread and complete it, then remove this comment. -->
# output
This model is a fine-tuned version of [PlanTL-GOB-ES/bsc-bio-ehr-es](https://huggingface.co/PlanTL-GOB-ES/bsc-bio-ehr-es)... | {"base_model": "PlanTL-GOB-ES/bsc-bio-ehr-es", "datasets": ["Rodrigo1771/symptemist-85-ner"], "library_name": "transformers", "license": "apache-2.0", "metrics": ["precision", "recall", "f1", "accuracy"], "tags": ["token-classification", "generated_from_trainer"], "model-index": [{"name": "output", "results": [{"task":... |
kunkunhu/craft_mol | kunkunhu | null | [
"region:us"
] | 2025-01-25T15:38:37 | 2025-01-26T09:08:28 | 0 | 0 | ---
{}
---
# CRAFT
CRAFT: Consistent Representational Fusion of Three Molecular Modalities | [
"CRAFT"
] | Non_BioNLP | # CRAFT
CRAFT: Consistent Representational Fusion of Three Molecular Modalities | {} |
jiey2/DISC-MedLLM | jiey2 | text-generation | [
"transformers",
"pytorch",
"baichuan",
"text-generation",
"medical",
"custom_code",
"zh",
"dataset:Flmc/DISC-Med-SFT",
"arxiv:2308.14346",
"license:apache-2.0",
"autotrain_compatible",
"text-generation-inference",
"endpoints_compatible",
"region:us"
] | 2023-11-04T10:43:52 | 2023-11-04T10:48:48 | 16 | 1 | ---
datasets:
- Flmc/DISC-Med-SFT
language:
- zh
license: apache-2.0
tags:
- medical
---
This repository contains the DISC-MedLLM, version of Baichuan-13b-base as the base model.
**Please note that due to the ongoing development of the project, the model weights in this repository may differ from those in our currentl... | [
"MEDDIALOG"
] | BioNLP | This repository contains the DISC-MedLLM, version of Baichuan-13b-base as the base model.
**Please note that due to the ongoing development of the project, the model weights in this repository may differ from those in our currently deployed demo.**
Check [DISC-MedLLM](https://github.com/FudanDISC/DISC-MedLLM) for mor... | {"datasets": ["Flmc/DISC-Med-SFT"], "language": ["zh"], "license": "apache-2.0", "tags": ["medical"]} |
ManoloPueblo/LLM_MERGE_CC4 | ManoloPueblo | null | [
"safetensors",
"mistral",
"merge",
"mergekit",
"lazymergekit",
"llm-merge-cc4",
"OpenPipe/mistral-ft-optimized-1218",
"mlabonne/NeuralHermes-2.5-Mistral-7B",
"license:apache-2.0",
"region:us"
] | 2024-11-10T13:55:30 | 2024-11-10T14:01:19 | 6 | 1 | ---
license: apache-2.0
tags:
- merge
- mergekit
- lazymergekit
- llm-merge-cc4
- OpenPipe/mistral-ft-optimized-1218
- mlabonne/NeuralHermes-2.5-Mistral-7B
---
# LLM_MERGE_CC4
LLM_MERGE_CC4 est une fusion des modèles suivants créée par ManoloPueblo utilisant [mergekit](https://github.com/cg123/mergekit):
* [OpenPipe/... | [
"CAS"
] | Non_BioNLP |
# LLM_MERGE_CC4
LLM_MERGE_CC4 est une fusion des modèles suivants créée par ManoloPueblo utilisant [mergekit](https://github.com/cg123/mergekit):
* [OpenPipe/mistral-ft-optimized-1218](https://huggingface.co/OpenPipe/mistral-ft-optimized-1218)
* [mlabonne/NeuralHermes-2.5-Mistral-7B](https://huggingface.co/mlabonne/N... | {"license": "apache-2.0", "tags": ["merge", "mergekit", "lazymergekit", "llm-merge-cc4", "OpenPipe/mistral-ft-optimized-1218", "mlabonne/NeuralHermes-2.5-Mistral-7B"]} |
razent/SciFive-large-Pubmed_PMC-MedNLI | razent | text2text-generation | [
"transformers",
"pytorch",
"tf",
"t5",
"text2text-generation",
"mednli",
"en",
"dataset:pubmed",
"dataset:pmc/open_access",
"arxiv:2106.03598",
"autotrain_compatible",
"text-generation-inference",
"endpoints_compatible",
"region:us"
] | 2022-03-20T17:24:33 | 2022-03-22T04:05:21 | 1,302 | 2 | ---
datasets:
- pubmed
- pmc/open_access
language:
- en
tags:
- text2text-generation
- mednli
widget:
- text: 'mednli: sentence1: In the ED, initial VS revealed T 98.9, HR 73, BP 121/90,
RR 15, O2 sat 98% on RA. sentence2: The patient is hemodynamically stable'
---
# SciFive Pubmed+PMC Large on MedNLI
## Introduc... | [
"MEDNLI"
] | BioNLP |
# SciFive Pubmed+PMC Large on MedNLI
## Introduction
Finetuned SciFive Pubmed+PMC Large model achieved state-of-the-art results on [MedNLI (Medical Natural Language Inference)](https://paperswithcode.com/sota/natural-language-inference-on-mednli)
Paper: [SciFive: a text-to-text transformer model for biomedical lite... | {"datasets": ["pubmed", "pmc/open_access"], "language": ["en"], "tags": ["text2text-generation", "mednli"], "widget": [{"text": "mednli: sentence1: In the ED, initial VS revealed T 98.9, HR 73, BP 121/90, RR 15, O2 sat 98% on RA. sentence2: The patient is hemodynamically stable"}]} |
adipanda/makima-simpletuner-lora-2 | adipanda | text-to-image | [
"diffusers",
"flux",
"flux-diffusers",
"text-to-image",
"simpletuner",
"safe-for-work",
"lora",
"template:sd-lora",
"lycoris",
"base_model:black-forest-labs/FLUX.1-dev",
"base_model:adapter:black-forest-labs/FLUX.1-dev",
"license:other",
"region:us"
] | 2024-10-12T01:00:13 | 2024-10-13T19:26:05 | 16 | 0 | ---
base_model: black-forest-labs/FLUX.1-dev
license: other
tags:
- flux
- flux-diffusers
- text-to-image
- diffusers
- simpletuner
- safe-for-work
- lora
- template:sd-lora
- lycoris
inference: true
widget:
- text: unconditional (blank prompt)
parameters:
negative_prompt: blurry, cropped, ugly
output:
url:... | [
"BEAR"
] | Non_BioNLP |
# makima-simpletuner-lora-2
This is a LyCORIS adapter derived from [black-forest-labs/FLUX.1-dev](https://huggingface.co/black-forest-labs/FLUX.1-dev).
No validation prompt was used during training.
None
## Validation settings
- CFG: `3.5`
- CFG Rescale: `0.0`
- Steps: `20`
- Sampler: `None`
- Seed: `42`
- Re... | {"base_model": "black-forest-labs/FLUX.1-dev", "license": "other", "tags": ["flux", "flux-diffusers", "text-to-image", "diffusers", "simpletuner", "safe-for-work", "lora", "template:sd-lora", "lycoris"], "inference": true, "widget": [{"text": "unconditional (blank prompt)", "parameters": {"negative_prompt": "blurry, cr... |
sarahmiller137/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext-ft-ncbi-disease | sarahmiller137 | token-classification | [
"transformers",
"pytorch",
"safetensors",
"bert",
"token-classification",
"named-entity-recognition",
"en",
"dataset:ncbi_disease",
"license:cc",
"autotrain_compatible",
"endpoints_compatible",
"region:us"
] | 2022-08-22T16:06:00 | 2023-03-23T15:57:02 | 24 | 0 | ---
datasets: ncbi_disease
language: en
license: cc
metrics:
- precision
- recall
- f1
- accuracy
tags:
- named-entity-recognition
- token-classification
task:
- named-entity-recognition
- token-classification
widget:
- text: ' The risk of cancer, especially lymphoid neoplasias, is substantially elevated
in A-T pat... | [
"NCBI DISEASE"
] | BioNLP |
## Model information:
microsoft/BiomedNLP-PubMedBERT-base-uncased-abstract-fulltext model finetuned using the ncbi_disease dataset from the datasets library.
## Intended uses:
This model is intended to be used for named entity recoginition tasks. The model will identify disease entities in text. The model will pred... | {"datasets": "ncbi_disease", "language": "en", "license": "cc", "metrics": ["precision", "recall", "f1", "accuracy"], "tags": ["named-entity-recognition", "token-classification"], "task": ["named-entity-recognition", "token-classification"], "widget": [{"text": " The risk of cancer, especially lymphoid neoplasias, is s... |
tsavage68/MedQA_L3_1000steps_1e7rate_03beta_CSFTDPO | tsavage68 | text-generation | [
"transformers",
"safetensors",
"llama",
"text-generation",
"trl",
"dpo",
"generated_from_trainer",
"conversational",
"base_model:tsavage68/MedQA_L3_1000steps_1e6rate_SFT",
"base_model:finetune:tsavage68/MedQA_L3_1000steps_1e6rate_SFT",
"license:llama3",
"autotrain_compatible",
"text-generati... | 2024-05-20T07:31:23 | 2024-05-23T22:54:22 | 5 | 0 | ---
base_model: tsavage68/MedQA_L3_1000steps_1e6rate_SFT
license: llama3
tags:
- trl
- dpo
- generated_from_trainer
model-index:
- name: MedQA_L3_1000steps_1e7rate_03beta_CSFTDPO
results: []
---
<!-- This model card has been generated automatically according to the information the Trainer had access to. You
should p... | [
"MEDQA"
] | BioNLP |
<!-- This model card has been generated automatically according to the information the Trainer had access to. You
should probably proofread and complete it, then remove this comment. -->
# MedQA_L3_1000steps_1e7rate_03beta_CSFTDPO
This model is a fine-tuned version of [tsavage68/MedQA_L3_1000steps_1e6rate_SFT](https... | {"base_model": "tsavage68/MedQA_L3_1000steps_1e6rate_SFT", "license": "llama3", "tags": ["trl", "dpo", "generated_from_trainer"], "model-index": [{"name": "MedQA_L3_1000steps_1e7rate_03beta_CSFTDPO", "results": []}]} |
mradermacher/Llama-3-VNTL-Vectors-i1-GGUF | mradermacher | null | [
"transformers",
"gguf",
"mergekit",
"merge",
"en",
"base_model:Cas-Warehouse/Llama-3-VNTL-Vectors",
"base_model:quantized:Cas-Warehouse/Llama-3-VNTL-Vectors",
"endpoints_compatible",
"region:us",
"imatrix",
"conversational"
] | 2025-03-08T23:07:11 | 2025-03-09T01:00:08 | 589 | 0 | ---
base_model: Cas-Warehouse/Llama-3-VNTL-Vectors
language:
- en
library_name: transformers
tags:
- mergekit
- merge
quantized_by: mradermacher
---
## About
<!-- ### quantize_version: 2 -->
<!-- ### output_tensor_quantised: 1 -->
<!-- ### convert_type: hf -->
<!-- ### vocab_type: -->
<!-- ### tags: nicoboss -->
weig... | [
"CAS"
] | Non_BioNLP | ## About
<!-- ### quantize_version: 2 -->
<!-- ### output_tensor_quantised: 1 -->
<!-- ### convert_type: hf -->
<!-- ### vocab_type: -->
<!-- ### tags: nicoboss -->
weighted/imatrix quants of https://huggingface.co/Cas-Warehouse/Llama-3-VNTL-Vectors
<!-- provided-files -->
static quants are available at https://hugg... | {"base_model": "Cas-Warehouse/Llama-3-VNTL-Vectors", "language": ["en"], "library_name": "transformers", "tags": ["mergekit", "merge"], "quantized_by": "mradermacher"} |
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