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from logging import BASIC_FORMAT |
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from utils import * |
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from simulator import * |
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from networkx.algorithms.tree.branchings import Edmonds |
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from broadcast import BroadCastTopology |
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from pathlib import Path |
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import graphviz as gv |
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import networkx as nx |
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import subprocess |
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import argparse |
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import json |
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import sys |
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import os |
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def networkx_to_graphviz(g, src, dsts, label="partitions"): |
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"""Convert `networkx` graph `g` to `graphviz.Digraph`. |
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@type g: `networkx.Graph` or `networkx.DiGraph` |
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@rtype: `graphviz.Digraph` |
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""" |
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if g.is_directed(): |
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h = gv.Digraph() |
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else: |
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h = gv.Graph() |
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for u, d in g.nodes(data=True): |
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if u.split(",")[0] == src: |
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h.node(str(u.replace(":", " ")), fillcolor="red", style="filled") |
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elif u.split(",")[0] in dsts: |
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h.node(str(u.replace(":", " ")), fillcolor="green", style="filled") |
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h.node(str(u.replace(":", " "))) |
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for u, v, d in g.edges(data=True): |
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h.edge(str(u.replace(":", " ")), str(v.replace(":", " ")), label=str(d[label])) |
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return h |
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def N_dijkstra(src, dsts, G, num_partitions): |
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h = G.copy() |
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h.remove_edges_from(list(h.in_edges(source_node)) + list(nx.selfloop_edges(h))) |
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bc_topology = BroadCastTopology(src, dsts, num_partitions) |
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for dst in dsts: |
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path = nx.dijkstra_path(h, src, dst, weight="cost") |
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for i in range(0, len(path) - 1): |
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s, t = path[i], path[i + 1] |
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for j in range(bc_topology.num_partitions): |
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bc_topology.append_dst_partition_path(dst, j, [s, t, G[s][t]]) |
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return bc_topology |
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def N_direct(src, dsts, G, num_partitions): |
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bc_topology = BroadCastTopology(src, dsts, num_partitions) |
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for dst in dsts: |
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edge = G[src][dst] |
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for j in range(bc_topology.num_partitions): |
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bc_topology.set_dst_partition_paths(dst, j, [[src, dst, edge]]) |
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return bc_topology |
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def MDST(src, dsts, G, num_partitions): |
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h = G.copy() |
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h.remove_edges_from(list(h.in_edges(src)) + list(nx.selfloop_edges(h))) |
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DST_graph = Edmonds(h.subgraph([src] + dsts)) |
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opt_DST = DST_graph.find_optimum(attr="cost", kind="min", preserve_attrs=True, style="arborescence") |
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bc_topology = BroadCastTopology(src, dsts, num_partitions) |
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MDST_graph = nx.DiGraph() |
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for edge in list(opt_DST.edges()): |
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s, d = edge[0], edge[1] |
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MDST_graph.add_edge(s, d, **G[s][d]) |
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return append_src_dst_paths(src, dsts, MDST_graph, bc_topology), MDST_graph |
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def MULTI_MDST(src, dsts, G, num_partitions): |
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h = G.copy() |
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MDST_graphs = [] |
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while len(list(h.edges())) > 0: |
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_, MDST_graph = MDST(src, dsts, h, 1) |
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print("MDST graph: ", MDST_graph.edges.data()) |
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MDST_graphs.append(MDST_graph) |
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h.remove_edges_from(list(MDST_graph.edges())) |
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print("Number of MDSTs: ", len(MDST_graphs)) |
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def Min_Steiner_Tree(src, dsts, G, num_partitions, hop_limit=3000): |
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source_v, dest_v = src, dsts |
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h = G.copy() |
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h.remove_edges_from(list(h.in_edges(source_v)) + list(nx.selfloop_edges(h))) |
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nodes, edges = list(h.nodes), list(h.edges) |
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num_nodes, num_edges = len(nodes), len(edges) |
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id_to_name = {nodes.index(n) + 1: n for n in nodes} |
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config_loc = "write.set" |
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write_loc = "test.stplog" |
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param_loc = "test.stp" |
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with open(config_loc, "w") as f: |
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f.write('stp/logfile = "use_probname"') |
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f.close() |
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command = " ~/Documents/Packages/scipoptsuite-8.0.2/build/bin/applications/scipstp " |
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command += f"-f {param_loc} -s {config_loc} -l {write_loc}" |
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def construct_stp(): |
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section_begin = '33D32945 STP File, STP Format Version 1.0\n\nSECTION Comment\nName "Relay: cloud regions"\nCreator "S. Liu"\n' |
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section_begin += f'Remark "Cloud region problem adapted from relay"\nEND\n\nSECTION Graph\n' |
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section_begin += f"Nodes {num_nodes}\nEdges {num_edges}\nHopLimit {hop_limit}\n" |
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Edge_info = [] |
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cnt = 0 |
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for edge in edges: |
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s, d = nodes.index(edge[0]) + 1, nodes.index(edge[1]) + 1 |
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cost = h[edge[0]][edge[1]]["cost"] |
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cnt += 1 |
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Edge_info.append(f"A {s} {d} {cost}\n") |
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if cnt == num_edges: |
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Edge_info.append("END\n") |
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s = nodes.index(source_v) + 1 |
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v = [nodes.index(i) + 1 for i in dest_v] |
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terminal_info = [f"T {i}\n" for i in v] |
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terminal_info.append("END\n\nEOF") |
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section_terminal = f"""\nSECTION Terminals\nRoot {s}\nTerminals {len(dest_v)}\n""" |
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with open(param_loc, "w") as f: |
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f.write(section_begin) |
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for edge in Edge_info: |
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f.write(edge.lstrip()) |
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f.write(section_terminal) |
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for t in terminal_info: |
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f.write(t) |
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f.close() |
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return |
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def read_result(loc): |
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di_stree_graph = nx.DiGraph() |
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with open(loc, "r") as f: |
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lines = f.readlines() |
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for line in lines: |
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if line.startswith("E") and len(line.split()) == 3: |
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l = line.split() |
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src_r, dst_r = id_to_name[int(l[1])], id_to_name[int(l[2])] |
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di_stree_graph.add_edge(src_r, dst_r, **G[src_r][dst_r]) |
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return di_stree_graph |
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construct_stp() |
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process = subprocess.Popen(command, shell=True) |
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process.wait() |
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solution_graph = read_result(loc=write_loc) |
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print( |
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f"Number of overlays added: {len(solution_graph.nodes) - (1 + len(dsts))}, {[node for node in solution_graph.nodes if node not in [src]+dsts]}" |
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) |
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bc_topology = BroadCastTopology(src, dsts, num_partitions) |
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os.remove(config_loc) |
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os.remove(write_loc) |
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os.remove(param_loc) |
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return append_src_dst_paths(src, dsts, solution_graph, bc_topology) |
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if __name__ == "__main__": |
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parser = argparse.ArgumentParser() |
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parser.add_argument("jsonfile", help="input json file") |
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parser.add_argument("-a", "--algo", type=str, nargs="?", const="") |
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parser.add_argument("-n", "--num-vms", type=int, nargs="?", const="") |
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args = vars(parser.parse_args()) |
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print("Args:", args) |
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print(f"\n==============> Baseline generation") |
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with open(args["jsonfile"], "r") as f: |
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config_name = args["jsonfile"].split("/")[1].split(".")[0] |
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config = json.loads(f.read()) |
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G = make_nx_graph(num_vms=int(args["num_vms"])) |
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source_node = config["source_node"] |
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terminal_nodes = config["dest_nodes"] |
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print(f"source_v = '{source_node}'") |
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print(f"dest_v = {terminal_nodes}") |
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if args["algo"] is None: |
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algorithms = [ |
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"Ndirect", |
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"MDST", |
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] |
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else: |
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algorithms = [args["algo"]] |
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print(f"Algorithms: {algorithms}\n") |
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directory = f"paths/{config_name}" |
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if not os.path.exists(directory): |
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Path(directory).mkdir(parents=True, exist_ok=True) |
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num_partitions = config["num_partitions"] |
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for algo in algorithms: |
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outf = f"{directory}/{algo}.json" |
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print(f"Generate {algo} paths into {outf}") |
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if algo == "Ndirect": |
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bc_t = N_direct(source_node, terminal_nodes, G, num_partitions) |
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elif algo == "MDST": |
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bc_t, mdgraph = MDST(source_node, terminal_nodes, G, num_partitions) |
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elif algo == "MULTI-MDST": |
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bc_t = MULTI_MDST(source_node, terminal_nodes, G, num_partitions) |
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elif algo == "HST": |
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bc_t = Min_Steiner_Tree(source_node, terminal_nodes, G, num_partitions) |
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elif algo == "Ndijkstra": |
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bc_t = N_dijkstra(source_node, terminal_nodes, G, num_partitions) |
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else: |
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raise NotImplementedError(algo) |
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bc_t.set_num_partitions(config["num_partitions"]) |
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with open(outf, "w") as outfile: |
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outfile.write( |
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json.dumps( |
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{ |
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"algo": algo, |
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"source_node": bc_t.src, |
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"terminal_nodes": bc_t.dsts, |
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"num_partitions": bc_t.num_partitions, |
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"generated_path": bc_t.paths, |
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} |
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) |
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) |
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input_dir = "paths" |
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output_dir = "evals" |
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with open(sys.argv[1], "r") as f: |
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config_name = sys.argv[1].split("/")[1].split(".")[0] |
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config = json.loads(f.read()) |
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input_dir += f"/{config_name}" |
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output_dir += f"/{config_name}" |
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if not os.path.exists(output_dir): |
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Path(output_dir).mkdir(parents=True, exist_ok=True) |
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simulator = BCSimulator(int(args["num_vms"]), output_dir) |
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for algo in algorithms: |
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path = f"{input_dir}/{algo}.json" |
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simulator.evaluate_path(path, config) |
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