OpenPhase / peptide /metadata /feature_reproduction.md
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Add PhaseFlow training data packages (llps, dpr, peptide).
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# Feature Reproduction
No pretrained embeddings, model checkpoints, CondenGT-specific target tables,
opaque feature caches, or pre-generated missing-count views are included. The
missing-count views are deterministic transformations of
`data/raw/phase_diagram_original_scale.csv`.
1. `python scripts/prepare_missing_splits.py` partitions rows by the number of
NaN values across `group_11``group_44` without changing the source rows.
The generated views are intentionally excluded from `metadata/file_inventory.csv`.
A changed pandas version can alter CSV byte formatting; validate the total row
count (280,778), fields, and value equality when regenerating.