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  1. README.md +50 -3
  2. variants.csv +0 -0
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- ---
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- license: mit
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- ---
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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+ ---
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+ # 1. Metadata Block
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+ license: mit
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+ task_categories:
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+ - tabular-regression
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+ tags:
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+ - biology
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+ - genomics
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+ pretty_name: "Alzheimer's GWAS variants (hg19)"
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+ size_categories:
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+ - 1K<n<10K
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+
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+ # 2. Config & Split Management
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+ configs:
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+ - config_name: default
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+ data_files:
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+ - split: test
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+ path: "variants.csv"
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+ ---
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+
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+ # alzheimer's-variant-tutorial-data
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+
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+ ## Dataset Summary
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+ This dataset contains summary statistics for 1,000 genomic variants. Each row represents a single-nucleotide polymorphism (SNP) mapped to the hg19 reference genome.
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+
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+ ## Dataset Structure
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+
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+ ### Data Fields
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+ Based on the header of `variants.csv`:
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+
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+ | Column | Type | Description |
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+ | :--- | :--- | :--- |
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+ | `snpid` | string | Unique identifier in `chr:pos_ref_alt` format |
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+ | `chrom` | string | Chromosome (e.g., `chr6`) |
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+ | `pos` | int | Genomic position (hg19) |
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+ | `alt` | string | Alternate allele (effect allele) |
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+ | `ref` | string | Reference allele (non-effect allele) |
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+ | `rsid` | string | Reference SNP cluster ID |
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+ | `pval` | float | P-value of the association |
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+ | `beta` | float | Regression coefficient (effect size) |
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+ | `se` | float | Standard error of the beta |
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+
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+ ## Usage
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+
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+ ```python
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+ from datasets import load_dataset
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+ dataset = load_dataset("Genentech/alzheimer's-variant-tutorial-data", split="test")
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+ df = dataset.to_pandas()
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+ print(df.head())
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+ ```
variants.csv ADDED
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