Add metadata to dataset card
#2
by nielsr HF Staff - opened
README.md
CHANGED
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<div align="center">
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<img src="./assets/logo2.png" alt="Imaging-X Logo" width="80%">
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</div>
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@@ -243,7 +254,7 @@ These datasets form the foundation for training next-generation medical AI model
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| 243 |
| 22 | [CMB-PCA](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=95224082) | 2022 | 2D, 3D | CT, MR, WSI | Prostate | 31 | No | Cls, Pred | Prostate Cancer |
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| 244 |
| 23 | [CPTAC-LSCC_CT_PET](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=33948248) | 2018 | 2D, 3D | CT, PET, HistoPathology? | NA | 238 | No | NA | NA |
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| 245 |
| 24 | [Finding and Measuring Lungs in CT Data](https://www.heywhale.com/mw/dataset/5d71de448499bc002c0ae1fc) | 2019 | 2D, 3D | CT | Lung | 534 | Yes | Seg | NA |
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| 246 |
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| 25 | [Head CT Image Data](https://www.heywhale.com/mw/dataset/5d7213eb8499bc002c0af1e8) | 2019 | 2D | CT | Head | 200 | Yes | Cls | NA |
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| 247 |
| 26 | [LDCTIQAC2023](https://ldctiqac2023.grand-challenge.org/ldctiqac2023/) | 2023 | 2D | CT | NA | 1k | Yes | Reg | NA |
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| 248 |
| 27 | [APOLLO-5](https://wiki.cancerimagingarchive.net/display/Public/APOLLO-5) | 2022 | 2D, 3D | Multi | NA | 6.2k | No | NA | NA |
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| 249 |
| 28 | [Lung-Fused-CT-Pathology](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=39878702) | 2018 | 2D, 3D | CT, HistoPathology? | Lung | 36 | Yes | Seg | Lung Disease |
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@@ -860,7 +871,7 @@ These datasets form the foundation for training next-generation medical AI model
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| 860 |
| 78 | [RibFrac2020](https://ribfrac.grand-challenge.org/) | 2020 | 3D | CT | Ribs | 660 | Yes | Seg/Cls/Det | Rib fractures |
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| 861 |
| 79 | [BTCV Abdomen](https://www.synapse.org/\#!Synapse:syn3193805/wiki/217752) | 2015 | 3D | CT | Abdomen | 50 | Yes | Seg | N/A |
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| 862 |
| 80 | [BTCV Cervical](https://www.synapse.org/\#!Synapse:syn3193805/wiki/217752) | 2015 | 3D | CT | Cervix | 50 | Yes | Seg | Cervical cancer |
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| 863 |
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| 81 | [ACRIN-HNSCC-FDG-PET-CT (ACRIN 6685)](https://www.cancerimagingarchive.net/collection/acrin-
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| 864 |
| 82 | [ACRIN-DSC-MR-Brain (ACRIN 6677)](https://www.cancerimagingarchive.net/collection/acrin-dsc-mr-brain/) | 2019 | 2D/3D | CT/MR | Brain | 123 | Yes | Cls | Glioblastoma |
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| 865 |
| 83 | [ACRIN-FLT-Breast (ACRIN 6688)](https://www.cancerimagingarchive.net/collection/acrin-flt-breast/) | 2017 | 3D | CT/ PET | Breast | 83 | Yes | Cls | Breast Cancer |
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| 866 |
| 84 | [ACRIN-FMISO-Brain (ACRIN 6684)](https://www.cancerimagingarchive.net/collection/acrin-fmiso-brain/) | 2016 | 3D | CT/MR/ PET | Brain | 45 | Yes | Seg/Cls | Glioblastoma |
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@@ -1250,309 +1261,4 @@ These datasets form the foundation for training next-generation medical AI model
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| 1250 |
| 194 | [RIDER Phantom MR](https://www.cancerimagingarchive.net/collection/rider-phantom-mri/) | 2011 | 3D | MR | Phantom | 10 | No | QA | Phantom study |
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| 1251 |
| 195 | [RIDER Breast MR](https://www.cancerimagingarchive.net/collection/rider-breast-mri/) | 2011 | 3D | MR | Breast | 40 | No | Cls | Breast cancer |
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| 1252 |
| 196 | [ATLAS2023](https://atlas-challenge.u-bourgogne.fr/) | 2023 | 3D | MR | Liver | 90 | Yes | Seg | Hepatocellular carcinoma |
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| 1253 |
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| 197 | [SMILE-UHURA2023](https://www.synapse.org/\#!Synapse:syn47164761/wiki/620033) | 2023 | 3D | MR | Brain |
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| 1254 |
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| 198 | [CMRxRecon](https://doi.org/10.5281/zenodo.7840229) | 2023 | 2D/ 3D | MR | Heart | 300 | Yes | Rec/Seg | Cardiac diseases |
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| 1255 |
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| 199 | [CAS2023](https://codalab.lisn.upsaclay.fr/competitions/9804) | 2023 | 3D | MR | Brain | 150 | Yes | Seg | Anatomical segmentation |
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| 1256 |
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| 200 | [CROWN2023](https://crown.isi.uu.nl/) | 2023 | 3D | MR | Brain | 600 | Yes | Cls/ Reg | Multiple pathologies |
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| 1257 |
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| 201 | [QuantConn](https://doi.org/10.5281/zenodo.7848195) | 2023 | 3D | MR | Brain | 206 | Yes | Rec | Microstructure quantification |
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| 1258 |
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| 202 | [BONBID-HIE2023](https://bonbid-hie2023.grand-challenge.org/bonbid-hie2023/) | 2023 | 3D | MR | Brain | 133 | Yes | Seg | Hypoxic Ischemic Encephalopathy |
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| 1259 |
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| 203 | [LLD-MMR2023](https://github.com/LMMMEng/LLD-MMR2023) | 2023 | 3D | MR | Liver | 498 | Yes | Cls | Liver diseases |
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| 1260 |
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| 204 | [WBMR-NF](https://mgh-3dqi.github.io/) | 2023 | 3D | MR | Whole-body | 400 | Yes | Seg/Det | Neurofibromatosis |
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| 1261 |
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| 205 | [SLCN](https://slcn.grand-challenge.org/) | 2023 | 3D | MR | Brain | 514 | Yes | Reg/Cls | Neurodevelopmental disorders |
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| 1262 |
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| 206 | [SPPIN2023](https://sppin.grand-challenge.org/) | 2023 | 3D | MR | Abdomen | 96 | Yes | Seg | Neuroblastoma |
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| 1263 |
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| 207 | [Shifts Challenge 2022](https://shifts.grand-challenge.org/) | 2022 | 3D | MR | Brain | 172 | Yes | Seg | Multiple sclerosis |
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| 1264 |
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| 208 | [Mouse-Astrocytoma](https://www.cancerimagingarchive.net/collection/mouse-astrocytoma/) | 2017 | 3D | MR | Brain | 48 | No | Cls | Glioblastoma Multiforme |
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| 1265 |
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| 209 | [GBM-MR-NER-Outcomes](https://doi.org/10.7937/K9/TCIA.2014.FAB7YRPZ) | 2014 | 3D | MR | Brain | 45 | No | Reg | Glioblastoma |
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| 1266 |
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| 210 | [UPENN-GBM](https://www.cancerimagingarchive.net/collection/upenn-gbm/) | 2022 | 3D | MR | Brain | 3680 | Yes | Seg | Glioblastoma |
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| 1267 |
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| 211 | [ISPY1-Tumor-SEG-Radiomics](https://doi.org/10.7937/TCIA.XC7A-QT20) | 2022 | 3D | MR | Breast | 163 | Yes | Seg | Breast cancer |
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| 1268 |
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| 212 | [I-SPY2 Trial](https://www.cancerimagingarchive.net/collection/ispy2/) | 2022 | 3D | MR | Breast | 719 | Yes | Seg/ Cls | Breast cancer |
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| 1269 |
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| 213 | [IvyGAP-Radiomics](https://www.cancerimagingarchive.net/analysis-result/ivygap-radiomics/) | 2020 | 3D | MR | Brain | 37 | Yes | Seg | Glioblastoma |
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| 1270 |
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| 214 | [Brain-TR-GammaKnife](https://www.cancerimagingarchive.net/collection/brain-tr-gammaknife/) | 2023 | 3D | MR | Brain | 47 | Yes | Seg/ Cls | Brain cancer |
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| 1271 |
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| 215 | [ExACT](https://www.cancerimagingarchive.net/collection/exact/) | 2023 | 3D | MR | Anus | 30 | Yes | Cls/Loc | Anal cancer |
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| 1272 |
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| 216 | [ACNS0332-Tumor-Annotations](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=133073385) | 2022 | 3D | MR | Brain | 85 | Yes | Seg | Brain tumor |
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| 1273 |
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| 217 | [UCSF-PDGM](https://www.cancerimagingarchive.net/collection/ucsf-pdgm/) | 2022 | 3D | MR | Brain | 501 | Yes | Seg | Diffuse Gliomas |
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| 1274 |
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| 218 | [RHUH-GBM](https://www.cancerimagingarchive.net/collection/rhuh-gbm/) | 2023 | 3D | MR | Brain | 40 | Yes | Seg | Glioblastoma |
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| 1275 |
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| 219 | [RIDER Neuro MR](https://www.cancerimagingarchive.net/collection/rider-neuro-mri/) | 2011 | 3D | MR | Brain | 19 | No | Cls | Brain cancer |
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| 1276 |
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| 220 | [Meningioma-SEG-CLASS](https://www.cancerimagingarchive.net/collection/meningioma-seg-class/) | 2023 | 3D | MR | Brain | 96 | Yes | Seg/ Cls | Intracranial meningiomas |
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| 1277 |
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| 221 | [Mouse-Mammary](https://www.cancerimagingarchive.net/collection/mouse-mammary/) | 2015 | 3D | MR | Mammary | 32 | No | Cls | Breast Cancer |
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| 1278 |
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| 222 | [MRQy-Quality-Measures](https://www.cancerimagingarchive.net/analysis-result/mrqy-quality-measures/) | 2020 | 3D | MR | Brain, Cervix | 233 | No | QA | Brain and Cervical Cancers |
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| 1279 |
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| 223 | [DICOM-Glioma-SEG](https://www.cancerimagingarchive.net/analysis-result/dicom-glioma-seg/) | 2020 | 3D | MR | Brain | 167 | Yes | Seg | Brain cancer |
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| 1280 |
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| 224 | [ADAM2020](https://adam.isi.uu.nl/) | 2020 | 3D | MR | Brain | 255 | Yes | Seg/Det/Cls | Intracranial aneurysms |
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| 1281 |
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| 225 | [CSI15](https://csi2015.weebly.com/challenges.html) | 2015 | 2D/ 3D | MR/X-RAY | Spine | 345 | Yes | Cls/Seg | Spine conditions |
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| 1282 |
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| 226 | [LPBA40](https://continuousregistration.grand-challenge.org/data/) | 2001 | 3D | MR | Brain | 40 | Yes | Seg | Healthy |
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| 1283 |
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| 227 | [Continuous Registration ISBR18](https://continuousregistration.grand-challenge.org/home/) | 2018 | 3D | MR | Brain | 18 | Yes | Seg | Registration challenge |
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| 1284 |
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| 228 | [CUMC12](https://continuousregistration.grand-challenge.org/data/) | 2018 | 3D | MR | Head and Neck | 18 | Yes | Seg | Not specified |
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| 1285 |
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| 229 | [MGH10](https://continuousregistration.grand-challenge.org/data/) | 2018 | 3D | MR | Brain | 10 | Yes | Seg | Anatomical segmentation |
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| 1286 |
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| 230 | [BrainPTM 2021](https://brainptm-2021.grand-challenge.org/) | 2021 | 3D | MR | Brain | 75 | Yes | Seg | Brain tumors |
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| 1287 |
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| 231 | [OpenMind](https://huggingface.co/datasets/AnonRes/OpenMind) | 2024 | 3D | MR | Head and Neck | 114570 | Yes | Seg/Rec | Health Status |
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| 1288 |
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</details>
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<details>
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<summary>
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### ☢️ 3D PET Datasets
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</summary>
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<a href="#-table-of-contents" style="float:right;">⬆ Back to Top</a>
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| # | Dataset | Year | Dim | Modality | Structure | Volumes | Label | Task | Diseases |
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|---|---|---|---|---|---|---|---|---|---|
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| 1301 |
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| 1 | [QIN PET Phantom](https://www.cancerimagingarchive.net/collection/qin-pet-phantom/) | 2014 | 3D | PET | Body | 2 | Yes | Seg | Phantom study |
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| 1302 |
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| 2 | [AutoPET](https://autopet.grand-challenge.org/) | 2022 | 3D | PET/CT | Whole-body | 1014 | Yes | Seg | Cancer |
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| 1303 |
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| 3 | [AutoPET II](https://autopet-ii.grand-challenge.org/) | 2023 | 3D | PET/CT | Whole-body | 1219 | Yes | Seg | Cancer |
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| 1304 |
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| 4 | [COVID-19-NY-SBU](https://www.cancerimagingarchive.net/collection/covid-19-ny-sbu/) | 2021 | 2D/ 3D | PET/CT/ MR/ X-RAY | Brain/ Chest | 1384 | No | Cls | COVID-19 |
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| 1305 |
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| 5 | [HECKTOR 2020](https://www.aicrowd.com/challenges/miccai-2020-hecktor) | 2020 | 3D | PET/CT | Head and Neck | 254 | Yes | Seg | Head and Neck Cancer |
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| 1306 |
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| 6 | [HECKTOR 2021](https://www.aicrowd.com/challenges/miccai-2021-hecktor) | 2021 | 3D | PET/CT | Head and Neck | 325 | Yes | Seg/ Reg | Head and Neck Cancer |
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| 1307 |
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| 7 | [HECKTOR 2022](https://www.aicrowd.com/challenges/miccai-2022-hecktor) | 2022 | 3D | PET/CT | Head and Neck | 883 | Yes | Seg/ Reg | Head and Neck Cancer |
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| 1308 |
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| 8 | [ACRIN-HNSCC-FDG-PET-CT (ACRIN 6685)](https://www.cancerimagingarchive.net/collection/acrin-hnscc-fdg-pet-ct/) | 2016 | 3D | PET/CT/MR/NM | Head and Neck | 260 | Yes | Cls | Head and Neck Cancer |
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| 1309 |
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| 9 | [ACRIN-FLT-Breast (ACRIN 6688)](https://www.cancerimagingarchive.net/collection/acrin-flt-breast/) | 2017 | 3D | PET/CT | Breast | 83 | Yes | Cls | Breast Cancer |
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| 1310 |
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| 10 | [ACRIN-FMISO-Brain (ACRIN 6684)](https://www.cancerimagingarchive.net/collection/acrin-fmiso-brain/) | 2016 | 3D | PET/CT/MR | Brain | 45 | Yes | Seg/Cls | Glioblastoma |
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| 1311 |
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| 11 | [ACRIN-NSCLC-FDG-PET (ACRIN 6668)](https://www.cancerimagingarchive.net/collection/acrin-nsclc-fdg-pet/) | 2020 | 3D | PET/CT | Lung | 242 | Yes | Cls | Lung cancer |
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| 1312 |
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| 12 | [AREN0532](https://www.cancerimagingarchive.net/collection/aren0532/) | 2022 | 2D/3D | PET/CR/ CT/ MR/ RTIMAGE/ US | Kidney | 544 | No | Cls | Wilms tumor |
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| 1313 |
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| 13 | [AREN0534](https://www.cancerimagingarchive.net/collection/aren0534/) | 2021 | 2D/ 3D | PET/CT/ MR/ US | Kidney | 239 | Yes | Seg | Wilms tumor |
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| 1314 |
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| 14 | [AHOD0831](https://www.cancerimagingarchive.net/collection/ahod0831/) | 2022 | 2D/3D | PET/CR/ CT/ DX/ MR/ NM/ OT/ SC/ XA | Lymphatic | 165 | Yes | Seg | Hodgkin Lymphoma |
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| 1315 |
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| 15 | [AHOD0831-Tumor-Annotations](https://doi.org/10.7937/4QAD-4280 ) | 2023 | 3D | PET/CT | Lymph nodes, spleen, salivary glands, Waldeyer'... | 165 | Yes | Seg | Hodgkin Lymphoma |
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| 1316 |
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| 16 | [HNSCC](https://www.cancerimagingarchive.net/collection/hnscc/) | 2020 | 3D | PET/CT/MR | Head and Neck | 627 | Yes | Seg | Head and Neck Cancer |
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| 1317 |
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| 17 | [CC-Tumor Heterogeneity](https://www.cancerimagingarchive.net/collection/cc-tumor-heterogeneity/) | 2023 | 3D | PET/CT/MR | Cervix | 23 | Yes | Seg/Cls | Cervical cancer |
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| 1318 |
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| 18 | [TCGA-BLCA](https://www.cancerimagingarchive.net/collection/tcga-blca/) | 2014 | 3D | PET/CT/ MR/ X-RAY | Bladder | 120 | No | Cls | Bladder carcinoma |
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| 1319 |
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| 19 | [TCGA-HNSC](https://www.cancerimagingarchive.net/collection/tcga-hnsc/) | 2014 | 3D | PET/CT/ MR | Head and Neck | 479 | No | Cls | Head and Neck Cancer |
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| 1320 |
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| 20 | [TCGA-KIRP](https://www.cancerimagingarchive.net/collection/tcga-kirp/) | 2014 | 3D | PET/CT/ MR | Kidney | 33 | No | Cls | Kidney cancer |
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| 1321 |
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| 21 | [TCGA-LIHC](https://www.cancerimagingarchive.net/collection/tcga-lihc/) | 2014 | 2D/3D | PET/CT/MR | Liver | 97 | No | Cls | Liver cancer |
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| 1322 |
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| 22 | [TCGA-LUSC](https://www.cancerimagingarchive.net/collection/tcga-lusc/) | 2016 | 3D | PET/CT | Lung | 37 | No | Cls | Lung cancer |
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| 1323 |
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| 23 | [TCGA-PRAD](https://www.cancerimagingarchive.net/collection/tcga-prad/) | 2015 | 3D | PET/CT/MR | Prostate | 14 | No | Cls | Prostate cancer |
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| 1324 |
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| 24 | [TCGA-UCEC](https://www.cancerimagingarchive.net/collection/tcga-ucec/) | 2020 | 3D | PET/CT/ MR/ X-RAY | Uterus | 65 | No | Cls | Uterine cancer |
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| 1325 |
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| 25 | [CPTAC-LSCC](https://www.cancerimagingarchive.net/collection/cptac-lscc/) | 2018 | 2D/3D | PET/CT/ MICROSCOPY | Lung | 212 | No | Cls | Lung cancer |
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| 1326 |
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| 26 | [CPTAC-LUAD](https://www.cancerimagingarchive.net/collection/cptac-luad/) | 2018 | 2D/ 3D | PET/CT/ MR | Lung | 244 | No | Cls | Lung cancer |
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| 1327 |
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| 27 | [CPTAC-PDA](https://www.cancerimagingarchive.net/collection/cptac-pda/) | 2018 | 3D | PET/CT/ MR/ US | Pancreas | 168 | No | Cls | Pancreatic cancer |
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| 1328 |
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| 28 | [CPTAC-SAR](https://www.cancerimagingarchive.net/collection/cptac-sar/) | 2019 | 2D/ 3D | PET/CT/ MR/ US | Abdomen/ Arm/ Bladder/ Chest/ Head–Neck/ Kidney/ Leg/... | 88 | No | Cls | Sarcomas |
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| 1329 |
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| 29 | [CPTAC-UCEC](https://www.cancerimagingarchive.net/collection/cptac-ucec/) | 2019 | 2D/ 3D | PET/CT/ MR/ US | Uterus | 250 | No | Cls | Endometrial Carcinoma |
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| 1330 |
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| 30 | [NSCLC-Radiogenomics](https://www.cancerimagingarchive.net/collection/nsclc-radiogenomics/) | 2015 | 3D | PET/CT | Chest | 211 | Yes | Seg/ Cls | Lung cancer |
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| 1331 |
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| 31 | [CMB-CRC](https://doi.org/10.7937/DJG7-GZ87) | 2022 | 2D/3D | PET/CT/ MR/ US/ WSI | Colon | 12 | No | Cls | Colorectal Cancer |
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| 1332 |
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| 32 | [CMB-GEC](https://www.cancerimagingarchive.net/collection/cmb-gec/) | 2022 | 2D/3D | PET/CT/ MICROSCOPY/ MR | Esophagus | 17 | No | Seg/Cls | Gastroesophageal Cancer |
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| 1333 |
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| 33 | [CMB-MEL](https://doi.org/10.7937/GWSP-WH72) | 2022 | 2D/ 3D | PET/CT/ US/ WSI | Skin | 40 | No | Cls | Melanoma |
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| 1334 |
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| 34 | [CMB-MML](https://www.cancerimagingarchive.net/collection/cmb-mml/) | 2022 | 2D/3D | PET/CR/ CT/ DX/ HISTOPATHOLOGY/ MR/ XA | Blood/Bone | 138 | No | Cls | Multiple Myeloma |
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| 1335 |
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| 35 | [CMB-PCA](https://www.cancerimagingarchive.net/collection/cmb-pca/) | 2022 | 2D/3D | PET/CT/ DX/ MR/ NM/ RF | Prostate | 50 | No | Cls | Prostate cancer |
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| 1336 |
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| 36 | [QIN-Breast](https://www.cancerimagingarchive.net/collection/qin-breast/) | 2015 | 3D | PET/CT/ MR | Breast | 68 | Yes | Cls | Breast cancer |
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| 1337 |
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| 37 | [QIN-HEADNECK](https://www.cancerimagingarchive.net/collection/qin-headneck/) | 2015 | 3D | PET/CT | Head and Neck | 279 | Yes | Seg | Head and neck carcinomas |
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| 1338 |
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| 38 | [AHEP0731](https://www.cancerimagingarchive.net/collection/ahep0731/) | 2021 | 3D | PET/CT/ MR/ US/ XA | Liver/ Chest | 190 | No | Seg/ Cls | Liver Cancer |
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| 1339 |
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| 39 | [Anti-PD-1 Lung](https://www.cancerimagingarchive.net/collection/anti-pd-1_lung/) | 2019 | 3D | PET/CT/ SC | Lung | 46 | No | Cls | Lung cancer |
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| 1340 |
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| 40 | [CALGB50303](https://www.cancerimagingarchive.net/collection/calgb50303/) | 2021 | 3D | PET/CT | Chest/ Abdomen/ Pelvis | 155 | Yes | Cls | Diffuse Large B-Cell Lymphoma |
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| 1341 |
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| 41 | [Head-Neck Cetuximab (RTOG 0522)](https://www.cancerimagingarchive.net/collection/head-neck-cetuximab/) | 2013 | 3D | PET/CT | Head and Neck | 111 | No | Cls | Head and Neck Carcinomas |
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| 1342 |
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| 42 | [Head-Neck-PET-CT](https://wiki.cancerimagingarchive.net/display/Public/Head-Neck-PET-CT) | 2017 | 3D | PET/CT | Head and Neck | 298 | Yes | Seg/ Cls | Head and Neck Cancer |
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| 1343 |
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| 43 | [Head-Neck-Radiomics-HN1](https://www.cancerimagingarchive.net/collection/head-neck-radiomics-hn1/) | 2019 | 3D | PET/CT | Head/ Neck | 137 | Yes | Seg | Head and Neck Cancer |
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| 1344 |
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| 44 | [Lung-PET-CT-Dx](https://www.cancerimagingarchive.net/collection/lung-pet-ct-dx/) | 2020 | 3D | PET/CT | Lung | 355 | Yes | Cls/ Det | Lung cancer |
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| 1345 |
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| 45 | [Anti-PD-1 Immunotherapy Melanoma](https://www.cancerimagingarchive.net/collection/anti-pd-1_melanoma/) | 2019 | 3D | PET/CT/MR | Skin | 47 | No | Cls | Melanoma |
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| 1346 |
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| 46 | [BREAST-DIAGNOSIS](https://www.cancerimagingarchive.net/collection/breast-diagnosis/) | 2011 | 2D/ 3D | PET/CT/MG/MR | Breast | 88 | Yes | Cls | Breast cancer |
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| 1347 |
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| 47 | [Parkinson](https://www.ppmi-info.org/access-data-specimens/download-data) | 2010 | 3D | PET/MR/SPECT | Brain | 683 | Yes | Cls | Parkinson's Disease |
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| 1348 |
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| 48 | [QIDW](https://qidw.rsna.org/) | 2015 | 3D | PET/CT/MR/US | Lung | 52000 | No | QA | Quality assurance |
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| 1349 |
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| 49 | [RIDER Lung PET-CT](https://www.cancerimagingarchive.net/collection/rider-lung-pet-ct/) | 2015 | 3D | PET/CT | Lung | 243 | No | Cls | Lung cancer |
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| 1350 |
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| 50 | [Soft-tissue-Sarcoma](https://www.cancerimagingarchive.net/collection/soft-tissue-sarcoma/) | 2015 | 3D | PET/CT/MR | Extremities | 51 | Yes | Seg/Cls | Soft-tissue sarcoma |
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| 1351 |
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| 51 | [Seg Soft Tissue](https://tianchi.aliyun.com/dataset/dataDetail?dataId=89694) | 2021 | 3D | PET/CT/MR | Soft tissue | 51 | Yes | Seg | Soft-tissue sarcomas (preprocessed) |
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| 1352 |
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| 52 | [fastPET-LD](https://fastpet-ld.grand-challenge.org/) | 2021 | 3D | PET/CT | Whole Body | 68 | Yes | Det | Oncologic Imaging |
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| 1353 |
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| 53 | [CT-vs-PET-Ventilation-Imaging](https://www.cancerimagingarchive.net/collection/ct-vs-pet-ventilation-imaging/) | 2022 | 3D | PET/CT | Lung | 20 | No | Cls | Lung cancer |
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| 1354 |
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| 54 | [NaF PROSTATE](https://www.cancerimagingarchive.net/collection/naf-prostate/) | 2013 | 3D | PET/CT | Prostate | 9 | No | Cls | Prostate cancer |
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| 55 | [Pseudo-PHI-DICOM-Data](https://www.cancerimagingarchive.net/collection/pseudo-phi-dicom-data/) | 2021 | 2D/3D | PET/CT/MR/X-RAY | Various | 21 | No | Reg | Various cancers |
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| 1356 |
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| 56 | [PDMR-833975-119-R](https://doi.org/10.7937/TCIA.0ECK-C338) | 2020 | 3D | PET/CT/MR | Pancreas | 20 | No | Cls | Pancreatic adenocarcinoma |
|
| 1357 |
-
| 57 | [APOLLO-5-LSCC](https://doi.org/10.7937/TCIA.QQ0G-EB24) | 2021 | 3D | PET/CT | Lung | 36 | Yes | Seg | Lung squamous cell carcinoma |
|
| 1358 |
-
| 58 | [ARAR0331](https://www.cancerimagingarchive.net/collection/arar0331/) | 2022 | 3D | PET/CT/MR | Head | 108 | Yes | Seg | Nasopharyngeal cancer |
|
| 1359 |
-
| 59 | [CALGB50303-Tumor-Annotations](https://www.cancerimagingarchive.net/analysis-result/calgb50303-tumor-annotations/) | 2023 | 3D | PET/CT | Lymphatic system | 155 | Yes | Seg/ Cls | Diffuse Large B-Cell Lymphoma |
|
| 1360 |
-
| 60 | [OASIS-3](https://www.oasis-brains.org/) | 2019 | 3D | PET/CT/MR | Brain | 5699 | Yes | Seg/Cls | Alzheimer's Disease |
|
| 1361 |
-
| 61 | [TADPOLE](https://tadpole.grand-challenge.org/Home/) | 2017 | 3D | PET/MR | Brain | 1667 | Yes | Cls/ Reg | Alzheimer's Disease |
|
| 1362 |
-
| 62 | [ADNI](https://adni.loni.usc.edu) | 2017 | 3D | PET/MR | Brain | 2500 | No | Cls | Alzheimer's Disease |
|
| 1363 |
-
| 63 | [ADNIDOD](https://ida.loni.usc.edu/login.jsp?project=ADNIDOD) | 2017 | 3D | PET/MR | Brain | 195 | No | Cls | Alzheimer's Disease |
|
| 1364 |
-
| 64 | [AIBL](https://www.aibl.csiro.au/adni/index.html) | 2017 | 3D | PET/MR | Brain | 278 | Yes | Cls | Alzheimer's Disease |
|
| 1365 |
-
| 65 | [PETfrog](https://openneuro.org/datasets/ds002385/versions/1.1.0) | 2020 | 3D | PET/MR | Brain | 238 | No | Cls | Brain development |
|
| 1366 |
-
</details>
|
| 1367 |
-
|
| 1368 |
-
<details>
|
| 1369 |
-
<summary>
|
| 1370 |
-
|
| 1371 |
-
### 🩺 3D Ultrasound Datasets
|
| 1372 |
-
|
| 1373 |
-
</summary>
|
| 1374 |
-
|
| 1375 |
-
<a href="#-table-of-contents" style="float:right;">⬆ Back to Top</a>
|
| 1376 |
-
|
| 1377 |
-
| # | Dataset | Year | Dim | Modality | Structure | Volumes | Label | Task | Diseases |
|
| 1378 |
-
|---|---|---|---|---|---|---|---|---|---|
|
| 1379 |
-
| 1 | [TDSC-ABUS2023](https://tdsc-abus2023.grand-challenge.org/) | 2023 | 3D | US | Breast | 200 | Yes | Seg/ Cls/ Det | Breast cancer |
|
| 1380 |
-
| 2 | [CETUS2014](https://www.creatis.insa-lyon.fr/Challenge/CETUS/index.html) | 2014 | 3D | US | Heart | 45 | Yes | Seg | Cardiac conditions |
|
| 1381 |
-
| 3 | [MVSeg-3DTEE2023](https://www.synapse.org/\#!Synapse:syn51186045/wiki/621356) | 2023 | 3D | US | Mitral valve | 175 | Yes | Seg | Mitral valve disease |
|
| 1382 |
-
| 4 | [AREN0532](https://www.cancerimagingarchive.net/collection/aren0532/) | 2022 | 2D/3D | US/ CR/ CT/ MR/ PET/ RTIMAGE | Kidney | 544 | No | Cls | Wilms tumor |
|
| 1383 |
-
| 5 | [AREN0533](https://www.cancerimagingarchive.net/collection/aren0533/) | 2022 | 3D | US/CR/CT/MR | Kidney | 294 | No | Cls | Wilms tumor |
|
| 1384 |
-
| 6 | [AREN0533-Tumor-Annotations](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=140312904) | 2023 | 3D | US/CR/CT/MR | Kidney | 294 | Yes | Seg | Wilms tumor |
|
| 1385 |
-
| 7 | [AREN0534](https://www.cancerimagingarchive.net/collection/aren0534/) | 2021 | 2D/3D | US/ CT/ MR/ PET | Kidney | 239 | Yes | Seg | Wilms tumor |
|
| 1386 |
-
| 8 | [CPTAC-PDA](https://www.cancerimagingarchive.net/collection/cptac-pda/) | 2018 | 3D | US/ CT/ MR/ PET | Pancreas | 168 | No | Cls | Pancreatic cancer |
|
| 1387 |
-
| 9 | [CPTAC-SAR](https://www.cancerimagingarchive.net/collection/cptac-sar/) | 2019 | 2D/3D | US/ CT/ MR/ PET | Abdomen/ Arm/ Bladder/ Chest/ Head–Neck/ Kidney/ Leg/ ... | 88 | No | Cls | Sarcomas |
|
| 1388 |
-
| 10 | [CPTAC-UCEC](https://www.cancerimagingarchive.net/collection/cptac-ucec/) | 2019 | 2D/3D | US/ CT/ MR/ PET | Uterus | 250 | No | Cls | Endometrial Carcinoma |
|
| 1389 |
-
| 11 | [CMB-CRC](https://doi.org/10.7937/DJG7-GZ87 ) | 2022 | 2D/3D | US/ CT/ MR/ PET/ WSI | Colon | 12 | No | Cls | Colorectal Cancer |
|
| 1390 |
-
| 12 | [CMB-LCA](https://www.cancerimagingarchive.net/collection/cmb-lca/) | 2022 | 2D/3D | US/ CT/ DX/ MR/ NM/ PT | Lung | 16 | No | Cls | Lung cancer |
|
| 1391 |
-
| 13 | [CMB-MEL](https://doi.org/10.7937/GWSP-WH72 ) | 2022 | 2D/3D | US/ CT/ PET/ WSI | Skin | 40 | No | Cls | Melanoma |
|
| 1392 |
-
| 14 | [AHEP0731](https://www.cancerimagingarchive.net/collection/ahep0731/) | 2021 | 3D | US/ CT/ MR/ PET/ XA | Liver/Chest | 190 | No | Seg/Cls | Liver Cancer |
|
| 1393 |
-
| 15 | [QIDW](https://qidw.rsna.org/) | 2015 | 3D | US/ CT/ MR/ PET | Lung | 52000 | No | QA | Quality assurance |
|
| 1394 |
-
| 16 | [CuRIOUS2018-MR FLAIR](https://curious2018.grand-challenge.org/) | 2018 | 3D | US/MR | Brain | 33 | Yes | Reg | Brain tumors |
|
| 1395 |
-
| 17 | [CuRIOUS2018-US](https://curious2018.grand-challenge.org/) | 2018 | 3D | US/MR | Brain | 32 | Yes | Reg | Brain tumors |
|
| 1396 |
-
| 18 | [CuRIOUS2018-MR T1W](https://curious2018.grand-challenge.org/Home/) | 2018 | 3D | US/MR | Brain | 33 | Yes | Reg | Brain tumor |
|
| 1397 |
-
| 19 | [CuRIOUS2019-MR-FLAIR](https://curious2019.grand-challenge.org/Data/) | 2019 | 3D | US/MR | Brain | 32 | Yes | Reg | Low-grade gliomas |
|
| 1398 |
-
| 20 | [CuRIOUS2019](https://curious2019.grand-challenge.org/Home/) | 2019 | 3D | US/MR | Brain | 33 | Yes | Reg | Brain tumor |
|
| 1399 |
-
| 21 | [CuRIOUS2019 US](https://curious2019.grand-challenge.org/Home/) | 2019 | 3D | US/MR | Brain | 33 | Yes | Reg | Low-grade gliomas |
|
| 1400 |
-
| 22 | [CuRIOUS2019-MR T1W](https://curious2019.grand-challenge.org/) | 2019 | 3D | US/MR | Brain | 33 | Yes | Reg | Brain tumor |
|
| 1401 |
-
| 23 | [CuRIOUS2022](https://curious2022.grand-challenge.org/) | 2022 | 3D | US/MR | Brain | 33 | Yes | Seg | Low-grade gliomas |
|
| 1402 |
-
| 24 | [Learn2Reg LUMIR](https://learn2reg.grand-challenge.org/) | 2024 | 3D | US/MR | Brain | 269 | Yes | Reg | Multi-modal |
|
| 1403 |
-
| 25 | [Prostate-MR-US-Biopsy](https://doi.org/10.7937/TCIA.2020.A61IOC1A) | 2020 | 3D | US/MR | Prostate | 1151 | Yes | Reg/Seg | Prostate Cancer |
|
| 1404 |
-
| 26 | [$$-RegPro2023](https://muregpro.github.io/) | 2023 | 3D | US/MR | Prostate | 108 | Yes | Reg/lmk | Prostate cancer |
|
| 1405 |
-
| 27 | [STACOM 2011](https://www.cardiacatlas.org/motion-tracking-2011-challenge/) | 2011 | 3D | US/MR | Heart | 1158 | Yes | Reg/Trk | Healthy volunteers |
|
| 1406 |
-
</details>
|
| 1407 |
-
|
| 1408 |
-
<details>
|
| 1409 |
-
<summary>
|
| 1410 |
-
|
| 1411 |
-
### 🧩 3D Other Datasets
|
| 1412 |
-
|
| 1413 |
-
</summary>
|
| 1414 |
-
|
| 1415 |
-
<a href="#-table-of-contents" style="float:right;">⬆ Back to Top</a>
|
| 1416 |
-
|
| 1417 |
-
| # | Dataset | Year | Dim | Modality | Structure | Volumes | Label | Task | Diseases |
|
| 1418 |
-
|---|---|---|---|---|---|---|---|---|---|
|
| 1419 |
-
| 1 | [MitoEM](https://mitoem.grand-challenge.org/) | 2020 | 3D | 3D MICROSCOPY | Brain | 2 | Yes | Seg | Mitochondrial ultrastructure |
|
| 1420 |
-
| 2 | [3D Platelet EM](https://leapmanlab.github.io/dense-cell/) | 2021 | 3D | 3D MICROSCOPY | Platelet | 2 | Yes | Seg | Platelet ultrastructure |
|
| 1421 |
-
| 3 | [PCa Bx 3Dpathology](https://www.cancerimagingarchive.net/collection/pca_bx_3dpathology/) | 2023 | 3D | 3D MICROSCOPY | Prostate | 50 | Yes | Seg/ Loc | Prostate cancer |
|
| 1422 |
-
| 4 | [CADA](https://cada.grand-challenge.org/) | 2020 | 3D | 3D DSA | Brain | 131 | Yes | Det/ Seg/ Cls | Cerebral aneurysms |
|
| 1423 |
-
| 5 | [ISBI2023 challenge - SHINY-ICARUS](https://www.synapse.org/\#!Synapse:syn45774070) | 2022 | 3D | 3D DSA | Internal Carotid Artery | 82 | Yes | Seg | Internal carotid artery aneurysms |
|
| 1424 |
-
| 6 | [CADA-AS](https://cada-as.grand-challenge.org/) | 2020 | 3D | 3D DSA | Brain | 110 | Yes | Seg | Cerebral aneurysms |
|
| 1425 |
-
| 7 | [CADA-RRE](https://cada-rre.grand-challenge.org/) | 2020 | 3D | 3D DSA | Brain | 131 | Yes | Seg/Cls | Cerebral aneurysm |
|
| 1426 |
-
| 8 | [XPRESS2023](https://xpress.grand-challenge.org/) | 2023 | 3D | 3D X-RAY | Brain | 3 | Yes | Seg | Neuroanatomy |
|
| 1427 |
-
| 9 | [Learn2Reg ThoraxCBCT](https://learn2reg.grand-challenge.org/) | 2023 | 3D | CBCT/FBCT | Thorax | 40 | Yes | Reg | Lung cancer |
|
| 1428 |
-
| 10 | [Pancreatic-CT-CBCT-SEG](https://www.cancerimagingarchive.net/collection/pancreatic-ct-cbct-seg/) | 2021 | 3D | CBCT/CT | Pancreas | 40 | Yes | Seg | Pancreatic cancer |
|
| 1429 |
-
| 11 | [Pelvic-Reference-Data](https://www.cancerimagingarchive.net/collection/pelvic-reference-data/) | 2019 | 3D | CBCT/CT | Pelvis | 58 | Yes | Reg | Prostate cancer |
|
| 1430 |
-
| 12 | [ToothFairy2023](https://toothfairy.grand-challenge.org/toothfairy/) | 2023 | 3D | CBCT | Inferior Alveolar Nerve | 443 | Yes | Seg | Dental surgery planning |
|
| 1431 |
-
| 13 | [RETOUCH](https://retouch.grand-challenge.org/Home/) | 2017 | 3D | OCT | Retina | 112 | Yes | Seg | Retinal diseases |
|
| 1432 |
-
| 14 | [ROCC](https://rocc.grand-challenge.org/) | 2017 | 3D | OCT | Retina | 72 | Yes | Cls | Diabetic Retinopathy |
|
| 1433 |
-
| 15 | [OCT Glaucoma Detection](https://doi.org/10.5281/zenodo.1481223 ) | 2018 | 3D | OCT | Optic nerve head | 1110 | Yes | Cls | Glaucoma |
|
| 1434 |
-
| 16 | [OLIVES](https://github.com/olivesgatech/OLIVES_Dataset) | 2022 | 2D/3D | OCT | Eye | 78822 | Yes | Cls | Diabetic conditions |
|
| 1435 |
-
| 17 | [GAMMA](https://gamma.grand-challenge.org/) | 2021 | 2D/3D | OCT | Retina | 300 | Yes | Cls/Seg/Loc | Glaucoma |
|
| 1436 |
-
| 18 | [Farsiu Ophthalmology 2013](https://people.duke.edu/~sf59/RPEDC_Ophth_2013_dataset.htm) | 2013 | 3D | OCT | Retina | 384 | Yes | Seg/Cls | Age-related macular degeneration |
|
| 1437 |
-
| 19 | [Chiu IOVS 2011](https://people.duke.edu/~sf59/Chiu_IOVS_2011_dataset.htm) | 2012 | 3D | OCT | Retina | 25 | Yes | Seg/Cls | Macular Degeneration |
|
| 1438 |
-
| 20 | [Chiu BOE 2014 dataset](https://people.duke.edu/~sf59/Chiu_BOE_2014_dataset.htm) | 2014 | 3D | OCT | Retina | 16 | Yes | Seg | Diabetic macular edema |
|
| 1439 |
-
| 21 | [Srinivasan BOE 2014](https://people.duke.edu/~sf59/Srinivasan_BOE_2014_dataset.htm) | 2014 | 3D | OCT | Retina | 45 | Yes | Cls | Eye diseases |
|
| 1440 |
-
| 22 | [Soltanian Optica 2021](https://people.duke.edu/~sf59/Soltanian_Optica_2021.htm) | 2021 | 3D | OCT | Retina | 8 | Yes | Seg | Glaucoma |
|
| 1441 |
-
| 23 | [STAGE](https://doi.org/10.5281/zenodo.7835341 ) | 2023 | 3D | OCT | Retina | 400 | Yes | Reg/Cls | Glaucoma |
|
| 1442 |
-
| 24 | [Eye OCT Datasets](https://tianchi.aliyun.com/dataset/dataDetail?dataId=90672) | 2021 | 3D | OCT | Retina | 148 | Yes | Cls/Seg | Retinal diseases |
|
| 1443 |
-
</details>
|
| 1444 |
-
|
| 1445 |
-
## 🎬 Video Medical Datasets
|
| 1446 |
-
|
| 1447 |
-
Video datasets capture temporal dynamics in medical procedures and patient monitoring.
|
| 1448 |
-
|
| 1449 |
-
<details>
|
| 1450 |
-
<summary>
|
| 1451 |
-
|
| 1452 |
-
### 🎬 Video Datasets
|
| 1453 |
-
|
| 1454 |
-
</summary>
|
| 1455 |
-
|
| 1456 |
-
<a href="#-table-of-contents" style="float:right;">⬆ Back to Top</a>
|
| 1457 |
-
|
| 1458 |
-
| # | Dataset | Year | Dim | Modality | Structure | Samples | Label | Task | Diseases |
|
| 1459 |
-
|---|---|---|---|---|---|---|---|---|---|
|
| 1460 |
-
| 1 | [CholecT50](https://cholectriplet2021.grand-challenge.org/) | 2023 | Video | Endoscopy | Gallbladder | 50 | No | Cls, Det | surgical instrument, action, target |
|
| 1461 |
-
| 2 | [CholecTriplet 2021](https://cholectriplet2021.grand-challenge.org) | 2021 | Video | Endoscopy | Gallbladder | 45 | Yes | Cls, Det | surgical instrument, action, target |
|
| 1462 |
-
| 3 | [SurgVisDom](https://surgvisdom.grand-challenge.org/) | 2020 | Video | Endoscopy | Bowel | 488 | Yes | Cls | skin lesion |
|
| 1463 |
-
| 4 | [CATARACTS](https://cataracts.grand-challenge.org/) | 2017 | Video | Microscopy | Retina | 50 | Yes | Cls, Det | surgical workflow |
|
| 1464 |
-
| 5 | [EndoVis 2018-SWAS](https://endovissub2017-workflow.grand-challenge.org/) | 2018 | Video | Endoscopy | Colon | 42 | Yes | Cls | surgical phase |
|
| 1465 |
-
| 6 | [EndoVis 2019-SWSA](https://endovissub-workflowandskill.grand-challenge.org/EndoVisSub-WorkflowAndSkill/) | 2019 | Video | Endoscopy | Gallbladder | 30 | Yes | Cls | surgical phase, action, instrument |
|
| 1466 |
-
| 7 | [EndoVis 2020-CATARACTS Workflow](https://cataracts2020.grand-challenge.org/) | 2020 | Video | Endoscopy | Retina | 50 | Yes | Cls | surgical workflow |
|
| 1467 |
-
| 8 | [EndoVis 2020-MISAW](https://www.synapse.org/Synapse:syn21776936/wiki/601700) | 2020 | Video | RGB | Artificial vessel | 27 | Yes | Cls | surgical phase |
|
| 1468 |
-
| 9 | [EndoVis 2021-PETRAW](https://www.synapse.org/\#!Synapse:syn25147789/wiki/608848) | 2021 | Video | Endoscopy | NA | 150 | Yes | Cls | surgical workflow |
|
| 1469 |
-
| 10 | [EndoVis 2022-SurgToolLoc](https://surgtoolloc.grand-challenge.org/) | 2022 | Video | Endoscopy | NA | 24695 | Yes | Cls | surgical instrument |
|
| 1470 |
-
| 11 | [T3 Challenge](https://thompson-challenge.grand-challenge.org/) | 2023 | Video | RGB | NA | 200 | Yes | Cls, Det, VQA | life-saving intervention procedure |
|
| 1471 |
-
| 12 | [Endo-FM](https://github.com/med-air/Endo-FM) | 2023 | 2D, Video | Endoscopy | NA | 32896 | No | NA | NA |
|
| 1472 |
-
| 13 | [OSS](https://www.synapse.org/Synapse:syn54123724/wiki/626561) | 2025 | Video | Endoscopy | NA | 330 | Yes | Cls | surgical suturing skill |
|
| 1473 |
-
| 14 | [FedSurg](https://www.synapse.org/Synapse:syn53137385/wiki/625370) | 2024 | 2D, Video | Endoscopy | NA | 30 | Yes | Cls | laparoscopic grading of the appendicitis |
|
| 1474 |
-
| 15 | [CardiacUDC](https://www.kaggle.com/datasets/xiaoweixumedicalai/cardiacudc-dataset) | 2023 | Video | Ultrasound | Heart | 992 | Yes | Seg, Cls | cardiac anatomical structures |
|
| 1475 |
-
| 16 | [m2cai16-tool](https://service.tib.eu/ldmservice/dataset/m2cai16-tool) | 2016 | Video | Endoscopy | Gallbladder | 15 | Yes | Cls, Det | surgical instrument |
|
| 1476 |
-
| 17 | [Cholec80](https://github.com/CAMMA-public/TF-Cholec80) | 2016 | Video | Endoscopy | Gallbladder | 80 | Yes | Cls | surgical phase |
|
| 1477 |
-
| 18 | [SAGES-CVS](https://www.cvschallenge.org/the-challenge-2) | 2024 | Video | Endoscopy | Gallbladder, Cystic Duct, Cystic Artery, Hepatocystic Triangle, Liver | 18000 | Yes | Cls, Seg | surgical skill |
|
| 1478 |
-
| 19 | [CatRelDet](https://ftp.itec.aau.at/datasets/ovid/relevant-cat-actions/index.html) | 2020 | Video | Microscopy | Retina | 8 | Yes | Cls, Det | surgical phase |
|
| 1479 |
-
| 20 | [SurgicalActions160](https://ftp.itec.aau.at/datasets/SurgicalActions160/) | 2017 | Video | Endoscopy | Female Reproductive System | 160 | Yes | Cls, Retrieval | surgical phase |
|
| 1480 |
-
| 21 | [OphNet](https://minghu0830.github.io/OphNet-benchmark/) | 2024 | Video | Microscopy | Retina | 743 | Yes | Cls | surgical phase |
|
| 1481 |
-
| 22 | [NurVid](https://github.com/minghu0830/NurViD-benchmark) | 2023 | Video | RGB | NA | 1,538 | Yes | Cls | nursing procedure |
|
| 1482 |
-
| 23 | [m2cai16-workflow](https://camma.unistra.fr/datasets/) | 2016 | Video | Endoscopy | Gallbladder | 41 | Yes | Cls | surgical phase |
|
| 1483 |
-
| 24 | [EndoCV 2021](https://endocv2021.grand-challenge.org/) | 2021 | Video | Endoscopy | Polyp | 4019 | Yes | Det | surgical actions |
|
| 1484 |
-
| 25 | [AdaptOR2021](https://adaptor2021.github.io/) | 2021 | Video | Endoscopy | Heart | 5584 | Yes | Det | 2D landmarks |
|
| 1485 |
-
| 26 | [CholecTriplet2022](https://cholectriplet2022.grand-challenge.org/) | 2022 | Video | Endoscopy | Gallbladder | 45 | Yes | Cls, Det | surgical instrument, action, target |
|
| 1486 |
-
| 27 | [m2cai16-tool-locations](http://ai.stanford.edu/~syyeung/toolDet.html) | 2016 | Video | Endoscopy | Gallbladder | 15 | Yes | Det, Track | surgical instrument |
|
| 1487 |
-
| 28 | [A-AFMA](https://a-afma.grand-challenge.org/) | 2020 | Video | Ultrasound | Bladder | NA | Yes | Det | amniotic fluid |
|
| 1488 |
-
| 29 | [GIANA](https://giana.grand-challenge.org/) | 2017 | Video | Endoscopy | Colon | 3500 | Yes | Seg, Det | angiodysplasia |
|
| 1489 |
-
| 30 | [EndoVis 2021-SimSurgSkill](https://www.synapse.org/Synapse:syn25127311/wiki/608840) | 2021 | Video | Endoscopy | NA | 321 | Yes | Det | surgical skill |
|
| 1490 |
-
| 31 | [AVOS](https://research.bidmc.org/surgical-informatics/avos) | 2024 | Video | Endoscopy | NA | 1997 | Yes | Det, Track | surgical instrument, action |
|
| 1491 |
-
| 32 | [EndoVis 2022-SimCol-to-3D](https://www.synapse.org/Synapse:syn28548633/wiki/617126) | 2022 | Video | Endoscopy | Colon | 15 | Yes | Est | depth, camera pose |
|
| 1492 |
-
| 33 | [KBD](https://endovissub2017-kidneyboundarydetection.grand-challenge.org/) | 2017 | Video | Endoscopy | Kidney | 4 | Yes | Seg | kidney boundary |
|
| 1493 |
-
| 34 | [EndoVis15-IST](https://endovissub-instrument.grand-challenge.org/) | 2015 | 2D, Video | Endoscopy | NA | 100 | Yes | Seg, Track | surgical instrument |
|
| 1494 |
-
| 35 | [Robotic Instrument Segmentation](https://endovissub2017-roboticinstrumentSeg.grand-challenge.org/) | 2017 | Video | Endoscopy | Bowel | 18 | Yes | Seg | surgical instrument |
|
| 1495 |
-
| 36 | [ROBUST-MIS](https://www.synapse.org/Synapse:syn18779624/wiki/592660) | 2019 | Video | Endoscopy | Colon | 10 | Yes | Seg, Det | surgical instrument |
|
| 1496 |
-
| 37 | [EndoVis20-CATARACTS](https://cataracts2020.grand-challenge.org/) | 2020 | Video | Endoscopy | NA | 50 | Yes | Seg | surgical instrument |
|
| 1497 |
-
| 38 | [EndoVis21-HeiSurf](https://www.synapse.org/\#!Synapse:syn25101790/wiki/608802) | 2021 | Video | Endoscopy | NA | 33 | Yes | Seg, Det, Track | surgical phase, action, instrument, organ |
|
| 1498 |
-
| 39 | [EndoVis22-P2ILF](https://p2ilf.grand-challenge.org/) | 2022 | Video | Endoscopy | Liver | 167 | Yes | Seg, Reg | liver |
|
| 1499 |
-
| 40 | [SegSTRONG-C](https://github.com/hding2455/CaRTS) | 2024 | 2D, Video | Endoscopy | NA | 17 | Yes | Seg | Surgical instrument |
|
| 1500 |
-
| 41 | [SegCol](https://www.synapse.org/\#!Synapse:syn54124209) | 2024 | 2D, Video | Endoscopy | NA | 78 | Yes | Seg | surgical instrument, colon folds |
|
| 1501 |
-
| 42 | [FetReg](https://www.synapse.org/\#!Synapse:syn25313156/wiki/610166) | 2021 | Video | Endoscopy | Placenta | 2060 | Yes | Seg | vessel |
|
| 1502 |
-
| 43 | [EndoVis23-PitVis](https://huggingface.co/datasets/UCL-WEISS/PitVis-2023) | 2024 | Video | Endoscopy | Brain, Pituitary gland | 25 | Yes | Seg, Det, Cls | surgical phase |
|
| 1503 |
-
| 44 | [EndoVis23-SurgToolLoc](https://opencas.dkfz.de/endovis/challenges/2023/) | 2023 | Video | Endoscopy | Pituitary, Abdomen | 949 | Yes | Seg, Det, Cls | surgical instrument |
|
| 1504 |
-
| 45 | [EndoVis18-RSS](https://endovissub2018-roboticsceneSeg.grand-challenge.org/Data/) | 2018 | Video | Endoscopy | Abdomen | 15 | Yes | Seg, Track | surgical instrument |
|
| 1505 |
-
| 46 | [EndoVis22-SAR-RARP50](https://rdr.ucl.ac.uk/projects/SAR-RARP50_Seg_of_surgical_instrumentation_and_Action_Recognition_on_Robot-Assisted_Radical_Prostatectomy_Challenge/191091) | 2022 | Video | Endoscopy | Prostate | 50 | Yes | Seg, Cls | surgical instrument, action |
|
| 1506 |
-
| 47 | [PhaKIR](https://phakir.re-mic.de/) | 2024 | Video | Endoscopy | Gallbladder | 13 | Yes | Seg, Det, Cls | surgical phase, instrument, instrument keypoint |
|
| 1507 |
-
| 48 | [SurgVU](https://surgvu24.grand-challenge.org/) | 2024 | Video | Endoscopy | Abdomen | 155 | Yes | Seg, Det, Cls | surgical phase, instrument |
|
| 1508 |
-
| 49 | [Cataract-1K](https://github.com/Negin-Ghamsarian/Cataract-1K) | 2023 | Video | Microscopy | Retina, Iris, Pupil | 2256 | Yes | Seg, Det, Cls | surgical phase, instrument, abnormality |
|
| 1509 |
-
| 50 | [LensID](https://ftp.itec.aau.at/datasets/ovid/LensID/) | 2021 | Video | Endoscopy | Retina | 2589 | Yes | Det, Seg | surgical phase, instrument, anatomy |
|
| 1510 |
-
| 51 | [AutoLaparo](https://autolaparo.github.io/) | 2022 | Video | Endoscopy | Uterus | 21 | Yes | Seg | surgical phase, action, instrument and key anatomy |
|
| 1511 |
-
| 52 | [CholecSeg8k](https://huggingface.co/datasets/minwoosun/CholecSeg8k) | 2020 | Video | Endoscopy | Gallbladder | 17 | Yes | Seg | surgical elements |
|
| 1512 |
-
| 53 | [CholecInstanceSeg](https://github.com/cai4cai/cholec_instance_seg) | 2024 | Video | Endoscopy | Gallbladder | 85 | Yes | Seg | surgical instrument |
|
| 1513 |
-
| 54 | [CaDIS](https://cataracts.grand-challenge.org/CaDIS/) | 2019 | Video | Microscopy | Retina, Iris, Pupil | 25 | Yes | Seg | surgical full scene |
|
| 1514 |
-
| 55 | [Endoscapes2023](https://github.com/CAMMA-public/Endoscapes) | 2023 | Video | Endoscopy | Gallbladder | 201 | Yes | Cls, Det, Seg | surgical anatomy, instrument, skill |
|
| 1515 |
-
| 56 | [The Dresden Surgical Anatomy Dataset](https://zenodo.org/records/6958337) | 2023 | Video | Endoscopy | Abdominal organs, vessel structures | 32 | Yes | Seg | surgical anatomy |
|
| 1516 |
-
| 57 | [PolypGen](https://www.synapse.org/\#!Synapse:syn26376615/wiki/613312) | 2023 | Video | Endoscopy | Polyp | 2,225 | Yes | Seg | polyp |
|
| 1517 |
-
| 58 | [ASU-Mayo polyp database](https://service.tib.eu/ldmservice/dataset/asu-mayo-clinic) | 2022 | Video | Endoscopy | Polyp | 38 | Yes | Seg | polyp |
|
| 1518 |
-
| 59 | [GynSurg](https://ftp.itec.aau.at/datasets/GynSurge/) | 2025 | Video | Endoscopy | Uterus | 15 | Yes | Cls, Seg | surgical instrument, anatomy |
|
| 1519 |
-
| 60 | [SurgT: Surgical Track](https://surgt.grand-challenge.org/Home/) | 2022 | video | Endoscopy | NA | 137 | Yes | Track | soft tissue |
|
| 1520 |
-
| 61 | [STIR](https://www.selectdataset.com/dataset/26e0a0e638714c2537a15140182e6f1c) | 2023 | Video | Endoscopy | NA | 60 | Yes | Track | tissue keypoint |
|
| 1521 |
-
| 62 | [HiSWA-RLLS](https://www.synapse.org/Synapse:syn54626087/wiki/626813) | 2024 | Video | Endoscopy | Liver | 50 | Yes | Det, Cls | surgical phase, action, instrument |
|
| 1522 |
-
| 63 | [Egosurgery](https://github.com/Fujiry0/EgoSurgery) | 2024 | Video | Endoscopy | NA | 27000 | Yes | Cls, Det | surgical phase, instrument |
|
| 1523 |
-
| 64 | [TN-SCUI2020](https://tn-scui2020.grand-challenge.org/) | 2020 | Video | Ultrasound | Thyroid gland | 637 | Yes | Cls | thyroid nodules |
|
| 1524 |
-
| 65 | [EchoNet-Dynamic](https://echonet.github.io/dynamic/index.html) | 2020 | Video | Ultrasound | Heart | 10030 | Yes | Measurement | heart |
|
| 1525 |
-
| 66 | [Gastrointestinal Atlas](http://www.gastrointestinalatlas.com/english/english.html) | 2000 | Video | Endoscopy | Bowel, Stomach | 5142 | No | NA | NA |
|
| 1526 |
-
| 67 | [Cataract-101](https://zenodo.org/record/1220951) | 2018 | Video | Microscopy | Retina | 101 | Yes | Cls | surgical phase |
|
| 1527 |
-
| 68 | [MedVidQA](https://opendatalab.org.cn/MedVidQA/download) | 2022 | Video | RGB | NA | 3010 | Yes | VQA | visual question answering |
|
| 1528 |
-
| 69 | [HMC-QU](https://aistudio.baidu.com/datasetdetail/102406) | 2021 | Video | Ultrasound | Heart | 162 | Yes | Cls | myocardial infarction |
|
| 1529 |
-
| 70 | [Endovis 2019-SCRE](https://endovissub2019-scared.grand-challenge.org/) | 2019 | Video | Endoscopy | Porcine cadaver | 9 | Yes | Recon, Est, Stereo Matching | depth |
|
| 1530 |
-
| 71 | [HyperKvasir](https://github.com/simula/hyper-kvasir) | 2020 | Video | Endoscopy | Colon, Esophagus, Stomach | 373 | Yes | Seg, Det, Cls | polyp |
|
| 1531 |
-
| 72 | [ERS](https://cvlab.eti.pg.gda.pl/publications/endoscopy-dataset) | 2022 | Video | Endoscopy | Gastrointestinal | 1520 | Yes | Cls, Seg | Abnormality |
|
| 1532 |
-
| 73 | [SUN-SEG](https://github.com/GewelsJI/VPS) | 2022 | Video | Endoscopy | Colon | 1106 | Yes | Seg | Polyp |
|
| 1533 |
-
| 74 | [SARAS-MESAD](https://saras-mesad.grand-challenge.org/dataset/) | 2021 | Video | Endoscopy | Prostate, Bladder | 4 | Yes | Det | surgical action |
|
| 1534 |
-
| 75 | [Ophora-160K](https://github.com/uni-medical/Ophora) | 2025 | Video | Microscopy | Retina | 9819 | Yes | Captioning | Video caption |
|
| 1535 |
-
</details>
|
| 1536 |
-
|
| 1537 |
-
---
|
| 1538 |
-
|
| 1539 |
-
## 🙏 Acknowledgment
|
| 1540 |
-
|
| 1541 |
-
We sincerely thank all researchers, clinicians, institutions, and organizations who have contributed to the development and public release of medical imaging datasets. Their dedicated efforts in data collection, annotation, curation, and sharing have laid the foundation for significant progress in medical artificial intelligence. The open availability of these resources has not only accelerated methodological innovation and benchmark creation but also fostered collaboration across disciplines, enabling the broader community to explore new directions in multimodal learning, foundation model development, and clinical translation. Without their commitment to advancing science through openness and collaboration, this survey and many of the achievements in the field would not have been possible.
|
| 1542 |
-
|
| 1543 |
-
---
|
| 1544 |
-
|
| 1545 |
-
|
| 1546 |
-
## 🌟 Star History
|
| 1547 |
-
|
| 1548 |
-
[](https://www.star-history.com/#uni-medical/Project-Imaging-X&Date)
|
| 1549 |
-
|
| 1550 |
-
---
|
| 1551 |
-
|
| 1552 |
-
<div align="center">
|
| 1553 |
-
|
| 1554 |
-
**Made with ❤️ for the Medical AI Research Community**
|
| 1555 |
-
|
| 1556 |
-
[⬆ Back to Top](#-awesome-medical-datasets)
|
| 1557 |
-
|
| 1558 |
-
</div>
|
|
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|
| 1 |
+
---
|
| 2 |
+
task_categories:
|
| 3 |
+
- other
|
| 4 |
+
language:
|
| 5 |
+
- en
|
| 6 |
+
tags:
|
| 7 |
+
- medical
|
| 8 |
+
- medical-imaging
|
| 9 |
+
- foundation-models
|
| 10 |
+
---
|
| 11 |
+
|
| 12 |
<div align="center">
|
| 13 |
<img src="./assets/logo2.png" alt="Imaging-X Logo" width="80%">
|
| 14 |
</div>
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|
| 254 |
| 22 | [CMB-PCA](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=95224082) | 2022 | 2D, 3D | CT, MR, WSI | Prostate | 31 | No | Cls, Pred | Prostate Cancer |
|
| 255 |
| 23 | [CPTAC-LSCC_CT_PET](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=33948248) | 2018 | 2D, 3D | CT, PET, HistoPathology? | NA | 238 | No | NA | NA |
|
| 256 |
| 24 | [Finding and Measuring Lungs in CT Data](https://www.heywhale.com/mw/dataset/5d71de448499bc002c0ae1fc) | 2019 | 2D, 3D | CT | Lung | 534 | Yes | Seg | NA |
|
| 257 |
+
| 25 | [Head CT Image Data](https://www.heywhale.com/mw/dataset/5d7213eb8499bc002c0af1e8) | 2019 | 2D, 3D | CT | Head | 200 | Yes | Cls | NA |
|
| 258 |
| 26 | [LDCTIQAC2023](https://ldctiqac2023.grand-challenge.org/ldctiqac2023/) | 2023 | 2D | CT | NA | 1k | Yes | Reg | NA |
|
| 259 |
| 27 | [APOLLO-5](https://wiki.cancerimagingarchive.net/display/Public/APOLLO-5) | 2022 | 2D, 3D | Multi | NA | 6.2k | No | NA | NA |
|
| 260 |
| 28 | [Lung-Fused-CT-Pathology](https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=39878702) | 2018 | 2D, 3D | CT, HistoPathology? | Lung | 36 | Yes | Seg | Lung Disease |
|
|
|
|
| 871 |
| 78 | [RibFrac2020](https://ribfrac.grand-challenge.org/) | 2020 | 3D | CT | Ribs | 660 | Yes | Seg/Cls/Det | Rib fractures |
|
| 872 |
| 79 | [BTCV Abdomen](https://www.synapse.org/\#!Synapse:syn3193805/wiki/217752) | 2015 | 3D | CT | Abdomen | 50 | Yes | Seg | N/A |
|
| 873 |
| 80 | [BTCV Cervical](https://www.synapse.org/\#!Synapse:syn3193805/wiki/217752) | 2015 | 3D | CT | Cervix | 50 | Yes | Seg | Cervical cancer |
|
| 874 |
+
| 81 | [ACRIN-HNSCC-FDG-PET-CT (ACRIN 6685)](https://www.cancerimagingarchive.net/collection/acrin-hnsc-fdg-pet-ct/) | 2016 | 3D | CT/MR/NM/PET | Head and Neck | 260 | Yes | Cls | Head and Neck Cancer |
|
| 875 |
| 82 | [ACRIN-DSC-MR-Brain (ACRIN 6677)](https://www.cancerimagingarchive.net/collection/acrin-dsc-mr-brain/) | 2019 | 2D/3D | CT/MR | Brain | 123 | Yes | Cls | Glioblastoma |
|
| 876 |
| 83 | [ACRIN-FLT-Breast (ACRIN 6688)](https://www.cancerimagingarchive.net/collection/acrin-flt-breast/) | 2017 | 3D | CT/ PET | Breast | 83 | Yes | Cls | Breast Cancer |
|
| 877 |
| 84 | [ACRIN-FMISO-Brain (ACRIN 6684)](https://www.cancerimagingarchive.net/collection/acrin-fmiso-brain/) | 2016 | 3D | CT/MR/ PET | Brain | 45 | Yes | Seg/Cls | Glioblastoma |
|
|
|
|
| 1261 |
| 194 | [RIDER Phantom MR](https://www.cancerimagingarchive.net/collection/rider-phantom-mri/) | 2011 | 3D | MR | Phantom | 10 | No | QA | Phantom study |
|
| 1262 |
| 195 | [RIDER Breast MR](https://www.cancerimagingarchive.net/collection/rider-breast-mri/) | 2011 | 3D | MR | Breast | 40 | No | Cls | Breast cancer |
|
| 1263 |
| 196 | [ATLAS2023](https://atlas-challenge.u-bourgogne.fr/) | 2023 | 3D | MR | Liver | 90 | Yes | Seg | Hepatocellular carcinoma |
|
| 1264 |
+
| 197 | [SMILE-UHURA2023](https://www.synapse.org/\#!Synapse:syn47164761/wiki/620033) | 2023 | 3D | MR | Brain |
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