IdA
string | IdB
string | labels
int64 | mechanism
string | effect
string | score
float64 | sentence
string | signor_id
string |
|---|---|---|---|---|---|---|---|
P29350
|
P43405
| 1
|
dephosphorylation
|
down-regulates
| 0.737
|
We propose that shp1 can dephosphorylate sites in zap-70 and syk that are involved in coupling these kinases to downstream signaling cascades, including erk2 and elements of the il-2 gene.
|
SIGNOR-70234
|
P18433
|
Q86YJ5
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
MARCH9, a member of the RING-CH family of transmembrane E3 ubiquitin ligases, down-regulates CD4, major histocompatibility complex-I (MHC), and ICAM-1 in lymphoid cells. To identify novel MARCH9 substrates, we used high throughput flow cytometry and quantitative mass spectrometry by stable isotope labeling by amino acids in cell culture (SILAC) to determine the differential expression of plasma membrane proteins in a MARCH9-expressing B cell line. This combined approach identified 13 potential new MARCH9 targets.
|
SIGNOR-271540
|
P04637
|
Q13535
| 0
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.742
|
Nhibition of atr kinase activity substantially reduces hypoxia-induced phosphorylation of p53 protein on serine 15 as well as p53 protein accumulation.
|
SIGNOR-115134
|
P40925
|
Q86X55
| 0
|
acetylation
|
down-regulates activity
| 0.355
|
Arginine Methylation of MDH1 by CARM1 Inhibits Glutamine Metabolism and Suppresses Pancreatic Cancer|Arginine methylation at R248 negatively regulates MDH1 activity|PRMT4/CARM1 methylates MDH1 at R248 and inhibits its dimerization
|
SIGNOR-267639
|
P43378
|
P00533
| 1
|
dephosphorylation
|
down-regulates activity
| 0.309
|
Conversely, increasing expression of PTPN9 wild type (WT) inhibits tyrosyl phosphorylation of ErbB2 and EGFR.|Protein-tyrosine phosphatase PTPN9 negatively regulates ErbB2 and epidermal growth factor receptor signaling in breast cancer cells.
|
SIGNOR-277130
|
Q2TAL8
|
P41252
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.2
|
QRICH1 promotes the expression of translation-related genes. our combined ChIP-seq and RNA-seq analyses identified that QRICH1 and ATF4 were enriched at the promoters of these specific tRNA synthetases, and that ER stress positively regulated their transcription (Fig. 4I). Together, these findings suggest that QRICH1 and ATF4 modulate tRNA metabolic processes to promote secreted protein synthesis during ER stress.
|
SIGNOR-269406
|
P00533
|
P00367
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
EGFR phosphorylates GDH1 at Y135 and contributes to GDH1 activation.|Mechanistically, GDH1 is activated by EGFR through phosphorylation at tyrosine 135 and, together with RSK2, enhances the cAMP response element-binding protein (CREB) activity via CaMKIV signaling, thereby promoting metastasis.
|
SIGNOR-279706
|
O14965
|
Q13158
| 1
|
phosphorylation
|
up-regulates
| 0.343
|
Here, we report that aur-a phosphorylates s203 of the fas associated with death domain protein (fadd)phosphorylation of s203 by aur-a serves to prime fadd for plk1-mediated phosphorylation at s194
|
SIGNOR-176739
|
Q9NY61
|
O96017
| 0
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.358
|
Three putative Chk2 phosphorylation sites (Stevens et al., 2003) are present in Che-1 at resides Ser141, Ser474, and Ser508. Thus, we performed in vitro Chk2 kinase assays utilizing the GST-Che-1 fusion peptides spanning these residues as substrates.| Taken together, these results indicate that Chk2 phosphorylates Che-1 and this phosphorylation contributes to increase Che-1 stability.
|
SIGNOR-264416
|
Q13616
|
P35222
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.598
|
These results indicate that the cul1/skp1/beta-trcp complex forms a ubiquitin ligase that mediates the degradation of beta-catenin.
|
SIGNOR-64499
|
O43516
|
Q06187
| 0
|
phosphorylation
|
up-regulates activity
| 0.542
|
Based on previous reports and the present data we suggest that Btk can induce WASP activation and also facilitates its subsequent inactivation through WIP phosphorylation.|We confirmed that Btk can indeed phosphorylate Y468 of baculovirus-generated human His-tagged WIP ( xref ), but that this is more difficult to show in cell extracts where WIP would be purified along with cellular WASP ().
|
SIGNOR-279801
|
Q02750
|
P06493
| 0
|
phosphorylation
|
down-regulates
| 0.496
|
P34cdc2 catalyzes the in vitro phosphorylation of mkk1 on both of these threonine residues and inactivates mkk1 enzymatic activity. Both sites are phosphorylated in vivo as well
|
SIGNOR-36116
|
P17481
|
Q15746
| 1
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.2
|
Results from these experiments demonstrated that in 10T1/2 cells Hoxa10-1 increased the activity of the telokin promoter 3-fold without affecting the activity of the other promoters analyzed (Fig. 2A). Similar results were also observed in A10 SMC (data not shown). In contrast, Hoxb8 significantly repressed the activity of the telokin, smooth muscle α-actin, and SM22α promoters by 70, 50, and 70%, respectively
|
SIGNOR-261640
|
P51812
|
P67809
| 1
|
phosphorylation
|
up-regulates
| 0.538
|
We therefore conclude that rsk1/rsk2 are novel activators of yb-1, able to phosphorylate the serine 102 residue.
|
SIGNOR-182165
|
P50502
|
P34947
| 0
|
phosphorylation
|
up-regulates activity
| 0.268
|
An in vitro screen for novel GRK substrates revealed Hsp70 interacting protein (Hip) as a substrate. GRK5, but not GRK2, bound to and stoichiometrically phosphorylated Hip in vitro. The primary binding domain of GRK5 was mapped to residues 303-319 on Hip, while the major site of phosphorylation was identified to be Ser-346. GRK5 also bound to and phosphorylated Hip on Ser-346 in cells.we found that the phosphorylation of Ser-346 was required for proper agonist-induced internalization of the chemokine receptor CXCR4.
|
SIGNOR-262877
|
P51955
|
Q9NZQ7
| 1
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.2
|
NEK2 interacts with PD-L1, phosphorylating the T194/T210 residues and preventing ubiquitin-proteasome pathway-mediated degradation of PD-L1 in ER lumen.
|
SIGNOR-277314
|
O60674
|
P40763
| 1
|
phosphorylation
|
up-regulates activity
| 0.818
|
Activation of wild type stat3: il-6 treatment causes stat3 recruitment to receptor tyrosine phosphopeptides (gp130) where it is phosphorylated on tyrosine 705 (y) by jak kinase
|
SIGNOR-236463
|
P11279
|
P19484
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.441
|
Nucleus-Translocated ACSS2 Promotes Gene Transcription for Lysosomal Biogenesis and Autophagy|A chromatin immunoprecipitation (ChIP) assay with antibodies against TFEB or ACSS2 demonstrated that glucose deprivation results in the binding of TFEB (Figure 3D) and ACSS2 (Figure 3E) to the promoter regions of CTSA, GBA, GUSB, and LAMP1|These results indicated that TFEB and ACSS2 are mutually required for their binding to the promoter regions of lysosomal genes. In line with these findings, glucose deprivation induced mRNA (Figure 3F) and protein (Figure 3G) expression for these lysosomal genes, which was largely abrogated by knockin of ACSS2 mutants
|
SIGNOR-276555
|
Q14721
|
P23469
| 0
|
dephosphorylation
|
down-regulates activity
| 0.355
|
Hypomyelination and increased activity of voltage-gated K(+) channels in mice lacking protein tyrosine phosphatase epsilon
|
SIGNOR-248450
|
P06241
|
Q00535
| 1
|
phosphorylation
|
up-regulates activity
| 0.608
|
Constitutively active Fyn phosphorylated Tyr15 of Cdk5. Fyn Facilitates Kinase Activity of Cdk5 Via Tyr15 Phosphorylation
|
SIGNOR-251156
|
P02749
|
P00742
| 0
|
cleavage
|
down-regulates activity
| 0.386
|
In the previous study, we found that factor Xa can produce the nicked form by cleaving Lys 317-Thr 318, using recombinant human domain V (r-Domain V). |The cleavage was completely inhibited by plasmin inhibitor (alpha2PI). The nicked form was demonstrated to show reduced affinity for CL with a dissociation constant of one order of magnitude larger than that of the intact beta2GPI.
|
SIGNOR-266997
|
Q8NHE4
|
O15379
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.2
|
Consistent with previous data, HDAC3 only bound to the ATP6V0E2 promoter in the presence of ALDH2.|Taken together, our data demonstrate that in the macrophages of LDLR-KO or ALDH2 rs671 mutant, AMPK phosphorylates ALDH2 at T356, which enables its nuclear translocation. Once in the nucleus, ALDH2 binds to HDAC3 and suppresses the transcription and protein expression of ATP6V0E2.
|
SIGNOR-271868
|
P45983
|
P45984
| 1
|
phosphorylation
|
up-regulates
| 0.593
|
Our studies revealed a novel mechanism in which phosphorylation of jnk2 is mediated by jnk1 before phosphorylation of p53, and then p53 is directly phosphorylated by jnk2 at ser6.
|
SIGNOR-155205
|
Q12857
|
A8MYZ6
| 1
|
transcriptional regulation
|
down-regulates quantity
| 0.2
|
By integrating transcriptomic profiling (RNA-seq) of Nfia- and Nfix-deficient GNPs with epigenomic profiling (ChIP-seq against NFIA, NFIB and NFIX, and DNase I hypersensitivity assays), we reveal that these transcription factors share a large set of potential transcriptional targets, suggestive of complementary roles for these NFI family members in promoting neural development
|
SIGNOR-268875
|
O43524
|
Q92574
| 1
|
transcriptional regulation
|
up-regulates quantity
| 0.448
|
FoxO3a binds to and transactivates the TSC1 promoter, indicating a key role for FoxO3a in regulating TSC1 expression. Together, these data demonstrate that FoxO3a regulates glycolysis downstream of Akt through transcriptional control of Tsc1
|
SIGNOR-259382
|
P10912
|
Q16829
| 0
|
dephosphorylation
|
down-regulates
| 0.313
|
Identification of protein tyrosine phosphatases with specificity for the ligand-activated growth hormone receptor.
|
SIGNOR-104545
|
Q9NP62
|
Q9P0U3
| 0
|
desumoylation
|
up-regulates activity
| 0.468
|
We show that Epac1 and Rap1, in response to cAMP, activate CaMKI to phosphorylate Ser47 in GCM1. This phosphorylation facilitates the interaction between GCM1 and the desumoylating enzyme SENP1 and thereby leads to GCM1 desumoylation and activation.
|
SIGNOR-262681
|
Q9H4A3
|
Q9UEW8
| 1
|
phosphorylation
|
up-regulates
| 0.446
|
Activation of wnk1 coincides with the phosphorylation and activation of two wnk1 substrates, namely, the protein kinases ste20/sps1-related proline alanine-rich kinase (spak) and oxidative stress response kinase-1 (osr1).
|
SIGNOR-151671
|
Q14790
|
P49768
| 1
|
cleavage
|
up-regulates activity
| 0.368
|
Remarkably, the caspases acting on PS1 could be subdivided in two groups. One group, containing caspase-8, -6 and -11, cleaved PS1 after residues ENDD329 and to a lesser extent after residues AQRD341. A second group consisting of caspase-3, -7 and -1 acted uniquely on AQRD341. Importantly, these two cleavage sites were also recognized by caspases in the C-terminal PS1 fragment produced by constitutive proteolysis.
|
SIGNOR-261760
|
P63000
|
Q96P48
| 0
|
gtpase-activating protein
|
down-regulates activity
| 0.455
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260451
|
P05067
|
P45983
| 0
|
phosphorylation
|
up-regulates
| 0.71
|
Phosphorylation of amyloid precursor protein at threonine 668 is essential for its copper-responsive trafficking in sh-sy5y neuroblastoma cells. We found that the threonine 668 within the abetapp intracellular domain (aid or elsewhere aicd) is indeed phosphorylated by jnk1
|
SIGNOR-117852
|
Q13418
|
P49841
| 1
|
phosphorylation
|
down-regulates activity
| 0.69
|
ILK can also directly phosphorylates GSK-3\u03b2 at Ser 9, inactivate it, and lead to activation of some transcription factors [ ].|ILK knockdown activates GSK-3beta.
|
SIGNOR-278252
|
Q16539
|
O43255
| 1
|
phosphorylation
|
up-regulates
| 0.2
|
We show that siah2 is subject to phosphorylation by p38 mapk, which increases siah2-mediated degradation of phd3.
|
SIGNOR-149890
|
P03372
|
O96013
| 0
|
phosphorylation
|
up-regulates activity
| 0.277
|
Further, PAK4 phosphorylated ER\u03b1-Ser305, a phosphorylation event needed for the PAK4 activation of ER\u03b1-dependent transcription.|Further, PAK4 phosphorylated ERalpha-Ser305, a phosphorylation event needed for the PAK4 activation of ERalpha dependent transcription.
|
SIGNOR-279472
|
P10275
|
P06493
| 0
|
phosphorylation
|
up-regulates
| 0.53
|
At first, the data show that cdk5 enables phosphorylation of ar at ser-81 site through direct biochemical interaction and, therefore, results in the stabilization of ar proteins although ar was reported as substrates for cdk9 (5) as well as cdk1
|
SIGNOR-175692
|
Q13315
|
Q8IUQ4
| 1
|
phosphorylation
|
down-regulates
| 0.308
|
Disruption of the hipk2-siah-1 complex is mediated by the atm/atr pathway and involves atm/atr-dependent phosphorylation of siah-1 at ser 19.
|
SIGNOR-177945
|
Q9ULT6
|
Q15262
| 0
|
dephosphorylation
|
up-regulates activity
| 0.354
|
We show that PTPRK acts via the transmembrane E3 ubiquitin ligase ZNRF3, a negative regulator of Wnt signaling promoting Wnt receptor degradation, which is also expressed in the organizer.
|
SIGNOR-260110
|
O14654
|
Q9UNE7
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
IRS4 was phosphorylated at Ser859 by CK1γ2 in vitro and in vivo, which promoted the polyubiquitination and degradation of IRS4 through the ubiquitin/lysosome pathway by the carboxyl terminus of Hsc70-interacting protein(CHIP).
|
SIGNOR-277616
|
O95644
|
Q9P1W9
| 0
|
phosphorylation
|
up-regulates activity
| 0.261
|
In addition to PIM1, also PIM2 and PIM3 were able to phosphorylate WT, but not MM NFATC1 in vitro (Fig. (Fig.22c).
|
SIGNOR-276772
|
Q00526
|
P46531
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.243
|
Mapping of cyclin C-dependent phosphosites on ICN1, using mass spectrometry revealed that several of them are located within the PEST-domain of Notch1, which controls ICN1 degradation38,39 (Fig. 5g and Supplementary Table 1). Three of them (T2512, S2514 and S2517) are localized within the consensus motif, “Cdc4 phosphodegron”, which is shared by most substrates of Fbw7 (Cdc4) ubiquitin ligase38. Two of these residues (S2514 and S2517) were previously shown by Fryer et al.20 to be phosphorylated by cyclin C-CDK8 in vitro, and all three were shown to play a role in controlling ICN1 stability via Fbw740. We verified that cyclin C-CDK8, C-CDK19 and C-CDK3 phosphorylate ICN1 on these three residues
|
SIGNOR-273167
|
P49840
|
Q05655
| 0
|
phosphorylation
|
down-regulates
| 0.342
|
Convergence of multiple signaling cascades at glycogen synthase kinase 3: edg receptor-mediated phosphorylation and inactivation by lysophosphatidic acid through a protein kinase c-dependent intracellular pathway.
|
SIGNOR-115722
|
Q9Y4K3
|
Q07820
| 1
|
ubiquitination
|
up-regulates activity
| 0.396
|
TRAF6 likely directly ubiquitinates MCL-1 since purified TRAF6 promoted the ubiquitination of recombinant GST-MCL-1 and co-expression of Tax with TRAF6 further enhanced MCL-1 ubiquitination .|Therefore, TRAF6 mediated MCL-1 stabilization appears to be a common mechanism of cell survival usurped by both viral and non viral cancers.
|
SIGNOR-278726
|
P12931
|
P78352
| 1
|
phosphorylation
|
up-regulates
| 0.565
|
These results indicate that psd-95 phosphorylation by src facilitates the integration of pyk2 to psd-95 signal complex, the activation of pyk2/src, as well as the subsequent tyrosine phosphorylation of nr2a, which ultimately results in the upregulation of nmda receptor function and synaptic transmission.
|
SIGNOR-205120
|
P49815
|
Q15418
| 0
|
phosphorylation
|
down-regulates
| 0.768
|
The mitogen-activated protein kinase (mapk)-activated kinase, p90 ribosomal s6 kinase (rsk) 1, was found to interact with and phosphorylate tuberin at a regulatory site, ser-1798, located at the evolutionarily conserved c terminus of tuberin. Rsk1 phosphorylation of ser-1798 inhibits the tumor suppressor function of the tuberin/hamartin complex, resulting in increased mtor signaling to s6k1
|
SIGNOR-128634
|
Q8IW41
|
Q15759
| 0
|
phosphorylation
|
up-regulates
| 0.619
|
Prak activity was regulated by p38alpha and p38beta both in vitro and in vivo and thr182 was shown to be the regulatory phosphorylation site.
|
SIGNOR-58131
|
P14921
|
P27361
| 0
|
phosphorylation
|
up-regulates
| 0.672
|
We found that hgf/sf activates the erk1 map kinase, leading to the phosphorylation of the threonine 38 residue of ets1
|
SIGNOR-116494
|
Q9UQL6
|
Q05655
| 0
|
phosphorylation
|
down-regulates activity
| 0.352
|
In this report, we show that VEGF stimulates PKD-dependent phosphorylation of HDAC5 at Ser259/498residues in ECs, which leads to HDAC5 nuclear exclusion and myocyte enhancer factor-2 (MEF2) transcriptional activation.
|
SIGNOR-260875
|
P42224
|
P00533
| 0
|
phosphorylation
|
up-regulates
| 0.738
|
The transcription factors stat1, stat3, and stat5 are directly phosphorylated by erbb-1, subsequent to which they dimerize through phosphotyrosine-sh2 domain interactions and translocate to the nucleus to activate gene trascription critical for proliferation
|
SIGNOR-235689
|
P28482
|
Q13285
| 1
|
phosphorylation
|
up-regulates activity
| 0.463
|
Here we show that maximal SF-1-mediated transcription and interaction with general nuclear receptor cofactors depends on phosphorylation of a single serine residue (Ser-203) located in a major activation domain (AF-1) of the protein. Moreover, phosphorylation-dependent SF-1 activation is likely mediated by the mitogen-activated protein kinase (MAPK) signaling pathway.
|
SIGNOR-249431
|
P48539
|
P35398
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.2
|
RORα regulates the expression of several genes in Purkinje cells. RORα becomes highly expressed in postmitotic Purkinje cells. It regulates their maturation, particularly dendritic differentiation. Dendritogenesis and the expression of several genes, including Shh, Itpr1, Pcp4, Calb1, Pcp2, and Slc1a6, normally expressed in mature Purkinje cells, are inhibited in RORα-deficient mice.
|
SIGNOR-266848
|
O14867
|
P04406
| 1
|
transcriptional regulation
|
up-regulates quantity
| 0.2
|
BACH1 activates transcription of Hexokinase 2 and Gapdh and increases glucose uptake, glycolysis rates, and lactate secretion, thereby stimulating glycolysis-dependent metastasis of mouse and human lung cancer cells.
|
SIGNOR-259339
|
O60260
|
Q9Y2N7
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
Here we show that IPAS is a key molecule involved in neuronal cell death in Parkinson's disease (PD). IPAS was ubiquitinated by Parkin for proteasomal degradation following carbonyl cyanide m-chlorophenyl hydrazone treatment. Phosphorylation of IPAS at Thr12 by PTEN-induced putative kinase 1 (PINK1) was required for ubiquitination to occur.
|
SIGNOR-263089
|
P04637
|
Q00987
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.968
|
The E3 ubiquitin ligase, MDM2, uses a dual-site mechanism to ubiquitinate and degrade the tumor suppressor protein p53, involving interactions with the N-terminal hydrophobic pocket and the acidic domain of MDM2.
|
SIGNOR-196116
|
P37231
|
P03372
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.28
|
Our data show for the first time that eralpha binds to ppar response element and represses its transactivation
|
SIGNOR-140233
|
P49840
|
P17252
| 0
|
phosphorylation
|
down-regulates
| 0.345
|
Convergence of multiple signaling cascades at glycogen synthase kinase 3: edg receptor-mediated phosphorylation and inactivation by lysophosphatidic acid through a protein kinase c-dependent intracellular pathway.
|
SIGNOR-115714
|
P27361
|
Q8NET8
| 1
|
phosphorylation
|
up-regulates activity
| 0.2
|
We observed that ERK-mediated phosphorylation of TRPV3 alters its responsiveness to repeated chemical stimuli. Among several putative ERK phosphorylation sites, we identified threonine 264 in the N-terminal ankyrin repeat domain as the most critical site for the ERK-dependent modulation of TRPV3 channel activity. Of note, Thr264 is in close vicinity to a structurally and functionally important TRPV3 region comprising an atypical finger 3 and oxygen-dependent hydroxylation site. In summary, our findings indicate that Thr264 in TRPV3 is a key ERK phosphorylation site mediating EGFR-induced sensitization of the channel to stimulate signaling pathways involved in regulating skin homeostasis.
|
SIGNOR-273672
|
P17612
|
Q14896
| 1
|
phosphorylation
|
up-regulates
| 0.275
|
Phosphorylation of cmybp-c by pka speeds actomyosin interactions and contributes to increased cardiac contractility following _-adrenergic stimulation.7, 8 phosphorylation by pka is essential for proper cardiac function /for the human isoform, three pka sites were previously identified (ser275, ser284, and ser304) /our results indicate that pka phosphorylates up to four sites in both the murine and human m-domains including a novel site not previously described for either protein (ser307 for mouse and ser311 for human).
|
SIGNOR-163760
|
P27361
|
P17535
| 1
|
phosphorylation
|
up-regulates
| 0.459
|
Menin binds the jun family transcription factor jund and inhibits its transcriptional activity. The menin-jund interaction blocks jun n-terminal kinase (jnk)-mediated jund phosphorylation and suppresses jund-induced transcription. We found a role for phosphorylation of the ser100 residue of jund;jund phosphorylation were prevented by inhibitors of calcium, calmodulin, or erk1/2 kinase.
|
SIGNOR-196034
|
Q9NPF5
|
P12931
| 0
|
phosphorylation
|
down-regulates activity
| 0.2
|
C-Src phosphorylates DMAP1 at Tyr246 and disrupts Bub3/DMAP1 complex formation.
|
SIGNOR-279431
|
P01106
|
P53350
| 0
|
phosphorylation
|
up-regulates activity
| 0.533
|
Here, we report that PDK1 directly induces phosphorylation of Polo-like kinase 1 (PLK1), which in turn induces MYC phosphorylation and protein accumulation. We show that PDK1-PLK1-MYC signaling is critical for cancer cell growth and survival, and small-molecule inhibition of PDK1/PLK1 provides an effective approach for therapeutic targeting of MYC dependency
|
SIGNOR-243522
|
P35222
|
Q13882
| 0
|
phosphorylation
|
down-regulates quantity
| 0.305
|
PTK6 directly phosphorylates beta-catenin on Tyr64, Tyr142, Tyr331 and/or Tyr333, with the predominant site being Tyr64.|The ability of PTK6 to negatively regulate beta-catenin and TCF transcription by modulating levels of TCF4 and TLE and Groucho could contribute to its growth-inhibitory activities in vivo.
|
SIGNOR-278289
|
P68400
|
P49810
| 1
|
phosphorylation
|
up-regulates activity
| 0.307
|
In vitro the large hydrophilic loop of PS-2 between transmembrane domains 6 and 7 can be phosphorylated by casein kinase-1 (CK-1) and CK-2, but not by PKA or PKC. Quantitative analysis of in vitro phosphorylation demonstrates the presence of two phosphorylation sites for CK-1 and a single site for CK-2. A deletion analysis revealed that the CTF of PS-2 is phosphorylated in vivo within an acidic sequence containing three potential phosphorylation sites for CKs (serines 327, 330, and 335). These data suggest that CK type protein kinases phosphorylate the CTF of PS-2 within its hydrophilic loop domain in vivo. Interestingly, the potential phosphorylation sites are located directly adjacent to the recently identified caspase cleavage sites.
|
SIGNOR-250934
|
P49841
|
P49815
| 1
|
phosphorylation
|
up-regulates activity
| 0.731
|
Gsk3 inhibits the mtor pathway by phosphorylating tsc2 in a manner dependent on ampk-priming phosphorylation.
|
SIGNOR-149380
|
Q9H1B7
|
Q12947
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.253
|
FOXF2 directly bound the promoter of E3 ligase interferon regulatory factor 2-binding protein-like (IRF2BPL) and induced its transcriptional expression. IRF2BPL in turn interacted with β-catenin, increasing its ubiquitination and degradation.
|
SIGNOR-267152
|
P35813
|
Q13153
| 1
|
dephosphorylation
|
down-regulates activity
| 0.337
|
Purified PP2Cα protein efficiently dephosphorylated PAK1 in vitro (Fig. 1, D and E). We previously assessed the time course of phospho-PAK1 dephosphorylation assessed using specific antibodies against either Ser(P)198/203 or Thr(P)422 sites in the PAK1 activation loop.
|
SIGNOR-248492
|
P35222
|
Q9H1B7
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
FOXF2 directly bound the promoter of E3 ligase interferon regulatory factor 2-binding protein-like (IRF2BPL) and induced its transcriptional expression. IRF2BPL in turn interacted with β-catenin, increasing its ubiquitination and degradation.
|
SIGNOR-267153
|
P17252
|
P49768
| 1
|
phosphorylation
|
up-regulates activity
| 0.264
|
A phosphorylation site at serine residue 346 was identified that is selectively phosphorylated by PKC but not by PKA. This site is localized within a recognition motif for caspases, and phosphorylation strongly inhibits proteolytic processing of PS1 by caspase activity during apoptosis.
|
SIGNOR-249236
|
Q96FA3
|
P32754
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
Decreased expression of 4-hydroxyphenylpyruvic acid dioxygenase (HPD), a key enzyme for tyrosine metabolism, is a cause of human tyrosinemia. However, the regulation of HPD expression remains largely unknown. Here, we demonstrate that molecular chaperone TTC36, which is highly expressed in liver, is associated with HPD and reduces the binding of protein kinase STK33 to HPD, thereby inhibiting STK33-mediated HPD T382 phosphorylation. The reduction of HPD T382 phosphorylation results in impaired recruitment of FHA domain-containing PELI1 and PELI1-mediated HPD polyubiquitylation and degradation.
|
SIGNOR-272959
|
Q14790
|
P07948
| 0
|
phosphorylation
|
down-regulates activity
| 0.311
|
The non-receptor tyrosine kinase, Lyn, can phosphorylate caspase-8 on Tyr-397 and Tyr-465, rendering it resistant to activational cleavage and inhibiting apoptosis.
|
SIGNOR-272980
|
Q13557
|
Q9UQD0
| 1
|
phosphorylation
|
up-regulates activity
| 0.281
|
CaMKII enhances voltage-gated sodium channel Nav1.6 activity and neuronal excitability|mmobilized peptide arrays and nanoflow LC-electrospray ionization/MS of Nav1.6 reveal potential sites of CaMKII phosphorylation, specifically Ser-561 and Ser-641/Thr-642 within the first intracellular loop of the channel.
|
SIGNOR-275792
|
P49841
|
Q96BR1
| 0
|
phosphorylation
|
down-regulates activity
| 0.442
|
Phosphorylation of GSK3 by PKB or SGK1 inhibits GSK3 activity|estern blotting using an antibody specific for the PKB/SGK1 consensus phosphorylation site in GSK3a/beta (serine 21 and 9 respectively) revealed an increase in GSK3a/beta phosphorylation in human embryonic kidney 293 (HEK293) cells overexpressing wild type SGK1, constitutively active SGK1, but not catalytically inactive SGK1.|The effect of SGK1 was mimicked by PKB and SGK3.
|
SIGNOR-249167
|
P55211
|
Q5T447
| 0
|
polyubiquitination
|
down-regulates activity
| 0.2
|
HECTD3 binds and ubiquitinates caspase-9.HECTD3 inhibits caspase-9 oligomerization and association with Apaf-1. HECTD3 suppressing caspase-9 activation is dependent on T157 phosphorylation by ERK.
|
SIGNOR-272329
|
Q13571
|
Q96J02
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.411
|
Here, we found that the level of LAPTM5 protein is regulated negatively by the degradation through ubiquitination by ITCH, an E3 ubiquitin ligase. ITCH directly binds to the PPxY motif of LAPTM5 via its WW domains and promotes ubiquitination through a HECT-type ligase domain.
|
SIGNOR-272721
|
Q13562
|
Q14938
| 0
|
transcriptional regulation
|
up-regulates quantity
| 0.265
|
For example, within the NFI targetome, we identified 6 collagen genes, 13 genes encoding potassium channel or glutamate receptor subunits and a range of factors related to axon guidance (e.g. Slit1, Robo1, Epha4, Epha5, Epha8)
|
SIGNOR-268904
|
P14210
|
O15393
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.2
|
we identified pro-hepatocyte growth factor (HGF) as a TMPRSS2 substrate and confirmed that HGF and it’s cognate receptor c-Met are activated in prostate cancers expressing TMPRSS2, a finding that also associated with the acquisition of a pro-invasive mesenchymal gene expression program.
|
SIGNOR-263657
|
Q9UNE7
|
P13569
| 1
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.471
|
Here we show that CHIP functions with Hsc70 to sense the folded state of CFTR and targets aberrant forms for proteasomal degradation by promoting their ubiquitination.
|
SIGNOR-272584
|
Q96R06
|
P49841
| 0
|
phosphorylation
|
up-regulates
| 0.271
|
Astrin acts as a substrate for gsk3beta and is phosphorylated at thr-111, thr-937 ((s/t)p motif) and ser-974/thr-978 ((s/t)xxx(s/t)-p motif;p is a phosphorylatable residue). Inhibition of gsk3beta impairs spindle and kinetochore accumulation of astrin and spindle formation at mitosis, suggesting that astrin association with the spindle microtubule and kinetochore may be dependent on phosphorylation by gsk3beta
|
SIGNOR-159578
|
P06850
|
P10275
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.305
|
A direct androgenic involvement in the expression of human corticotropin-releasing hormone|A potential androgen-responsive element (ARE) in the human CRH promoter was subsequently analyzed with bandshifts and cotransfections in neuroblastoma cells. In the presence of testosterone, recombinant human AR bound specifically to the CRH-ARE.
|
SIGNOR-268723
|
Q9Y4C1
|
Q16695
| 1
|
demethylation
|
up-regulates activity
| 0.2
|
Using a biochemical assay coupled with chromatography, we have purified a JmjC domain-containing protein, JHDM2A, which specifically demethylates mono- and dimethyl-H3K9.
|
SIGNOR-276846
|
P45983
|
O43602
| 1
|
phosphorylation
|
up-regulates activity
| 0.286
|
DCX phosphorylation by JNK1 is required for glioma suppression.
|
SIGNOR-279217
|
P29317
|
O14493
| 1
|
phosphorylation
|
down-regulates activity
| 0.477
|
EphA2 associates with claudin-4 via their extracellular domains. This association, in turn, leads to phosphorylation of the cytoplasmic carboxyl terminus of claudin-4 at Tyr-208. The tyrosine phosphorylation of claudin-4 attenuates association of claudin-4 with ZO-1, decreasing integration of claudin-4 into sites of cell-cell contact and enhancing paracellular permeability. These results indicate that EphA2 moderates the function of tight junctions via phosphorylation of claudin-4.
|
SIGNOR-262859
|
P08069
|
P46108
| 1
|
phosphorylation
|
down-regulates activity
| 0.722
|
On activation of the IGF-I receptor, Crk-II binds to phosphorylated tyrosine residues, especially in the juxtamembrane region. As a result of this binding, the IGF-I receptor kinase phosphorylates Tyr-221 of Crk-II, resulting in a change in intramolecular folding and binding of the SH2 domain to the phosphorylated Tyr-221, which causes rapid disassociation of the Crk-II-IGF-I receptor complex.
|
SIGNOR-251273
|
P10912
|
O60674
| 0
|
phosphorylation
|
up-regulates activity
| 0.766
|
Jak2 is then phosphorylated and, in turn, phosphorylates the GHR and the signal transducers and activators of transcription (STAT) protein.
|
SIGNOR-279198
|
O75093
|
O00712
| 0
|
transcriptional regulation
|
up-regulates quantity
| 0.249
|
For example, within the NFI targetome, we identified 6 collagen genes, 13 genes encoding potassium channel or glutamate receptor subunits and a range of factors related to axon guidance (e.g. Slit1, Robo1, Epha4, Epha5, Epha8)
|
SIGNOR-268899
|
P01189
|
P40763
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.638
|
We show that phospho-STAT3 activates POMC promoter in response to leptin signaling through a mechanism that requires an SP1-binding site in the POMC promoter.
|
SIGNOR-263497
|
Q9H4B4
|
Q16665
| 1
|
phosphorylation
|
down-regulates
| 0.348
|
Polo-like kinase 3 functions as a tumor suppressor and is a negative regulator of hypoxia-inducible factor-1 alpha under hypoxic conditionsplk3 can potentially inhibit hif-1_ by physical interaction and direct phosphorylation
|
SIGNOR-178743
|
O75581
|
P12931
| 0
|
phosphorylation
|
down-regulates activity
| 0.396
|
Both Src and Fer associate with LRP6 and phosphorylate LRP6 directly.|Wnt3a treatment of cells enhances tyrosine phosphorylation of endogenous LRP6 and, mechanistically, Src reduces cell surface LRP6 levels and disrupts LRP6 signalosome formation.
|
SIGNOR-279289
|
Q16204
|
P24941
| 0
|
phosphorylation
|
up-regulates
| 0.2
|
Serine 244 phosphorylation is required for h4 apoptotic function.
|
SIGNOR-121198
|
Q9H0K1
|
Q15078
| 1
|
phosphorylation
|
down-regulates
| 0.331
|
Sik2 phosphorylates p35 at ser 91, to trigger its ubiquitylation by pja2 and promote insulin secretion. _-cell knockout of sik2 leads to accumulation of p35 and impaired secretion
|
SIGNOR-204648
|
P49841
|
Q14103
| 1
|
phosphorylation
|
down-regulates activity
| 0.346
|
In kinase assays pka phosphorylated ser-87 of hnrnp d, whereas glycogen synthase kinase-3 beta (gsk-3 beta) phosphorylated ser-83, but only if ser-87 had been pre-phosphorylated by pka. Phosphorylation of ser-87 enhanced, whereas phosphorylation of ser-83 repressed, transactivation.
|
SIGNOR-102582
|
P27695
|
Q00535
| 0
|
phosphorylation
|
up-regulates activity
| 0.377
|
Apurinic/apyrimidinic endonuclease-1 (APE1) is a multifunctional DNA repair/gene regulatory protein in mammalian cells, and was recently reported to be phosphorylated at Thr233 by CDK5.
|
SIGNOR-276337
|
P28482
|
P05412
| 1
|
phosphorylation
|
up-regulates activity
| 0.79
|
Erk also undergoes rapid translocation into the nucleus, where it phosphorylates and activates a variety of transcription factor targets, including sp1, e2f, elk-1, and ap1.
|
SIGNOR-201943
|
O00712
|
Q02535
| 1
|
transcriptional regulation
|
down-regulates quantity
| 0.25
|
By integrating transcriptomic profiling (RNA-seq) of Nfia- and Nfix-deficient GNPs with epigenomic profiling (ChIP-seq against NFIA, NFIB and NFIX, and DNase I hypersensitivity assays), we reveal that these transcription factors share a large set of potential transcriptional targets, suggestive of complementary roles for these NFI family members in promoting neural development
|
SIGNOR-268879
|
P18031
|
P00519
| 1
|
dephosphorylation
|
down-regulates
| 0.612
|
These results illustrate selectivity in the effects of ptps in a cellular context and suggest that ptp1b may function as a specific, negative regulator of p210 bcr-abl signalling in vivo.
|
SIGNOR-56815
|
Q16566
|
Q99623
| 1
|
phosphorylation
|
down-regulates
| 0.338
|
Here we show that calcium/calmodulin-dependent kinase iv (camk iv) specifically binds to the c terminus of phb2 and phosphorylates phb2 at serine 91. Camk iv effectively decreased phb2-mediated repression of mef2 activity through phosphorylation
|
SIGNOR-174437
|
P19404
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.322
|
Phosphorylation-site analysis selects c-Src targets, including NDUFV2 (NADH dehydrogenase [ubiquinone] flavoprotein 2) at Tyr(193) of respiratory complex I and SDHA (succinate dehydrogenase A) at Tyr(215) of complex II. The phosphorylation of these sites by c-Src is supported by an in vivo assay using cells expressing their phosphorylation-defective mutants.
|
SIGNOR-276419
|
P08238
|
P68400
| 0
|
phosphorylation
|
down-regulates
| 0.333
|
Although the kinase responsible for hsp90? Phosphorylation in vivo is not known, it has been reported that ck2 can phosphorylate these sites in vitro (24). Thus, we prephosphorylated recombinant hsp90? With ck2 before addition to the reaction. Remarkably, hsp90? Phosphorylation greatly reduced its ability to inhibit apaf-1 oligomerization and caspase-9 recruitment (fig. 5b). These results indicate that the phosphorylation status of hsp90? Significantly impacts its ability to inhibit apoptosome formation.
|
SIGNOR-179264
|
Q15256
|
Q16539
| 1
|
dephosphorylation
|
down-regulates
| 0.558
|
As shown, gst-ptp-sl dephosphorylated efficiently both erk2 and p38 wild typetogether, these results indicate that the defective association of the tyrosine phosphatase ptp-sl with erk2 d319n and p38 d316n mutations impairs the retention and inactivation in the cytosol of these map kinases by ptp-sl.
|
SIGNOR-111762
|
P49789
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.466
|
The human tumor suppressor Fhit is a homodimeric histidine triad (HIT) protein of 147 amino acids which has Ap3A hydrolase activity. We have recently discovered that Fhit is phosphorylated in vivo and is phosphorylated in vitro by Src kinaseMALDI-TOF and HPLC-ESI tandem mass spectrometry of intact Fhit and proteolytic peptides of Fhit demonstrated that Fhit is phosphorylated on Y114 on either one or both subunitsThe decreases in the values of Km and kcat for the phosphorylated forms in comparison to those of unphosphorylated Fhit favor the formation and lifetime of the Fhit_Ap3A complex, which may enhance the tumor suppressor activity of Fhit.
|
SIGNOR-247134
|
P12931
|
Q969H4
| 1
|
phosphorylation
|
up-regulates activity
| 0.506
|
We identified Tyr 26 as a PDGF-induced and, additionally, Tyr 519 and Tyr 665 as SRC-induced tyrosine phosphorylation sites. Phosphomimetic mutants indicate that phosphorylation of Tyr 519 recruits CNK1 to the nucleus and additional phosphorylation of Tyr 26 enables CNK1 to promote SRE-dependent gene expression.
|
SIGNOR-275918
|
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