IdA
stringlengths 6
21
| IdB
stringlengths 6
21
| labels
int64 0
2
| mechanism
stringclasses 40
values | effect
stringclasses 10
values | score
float64 0.1
0.99
⌀ | sentence
stringlengths 10
1.63k
⌀ | signor_id
stringlengths 12
14
|
|---|---|---|---|---|---|---|---|
Q9Y4K4
|
P49841
| 1
|
phosphorylation
|
down-regulates
| 0.2
|
Gckr can phosphorylate an n-terminal recombinant fusion protein of gsk3_ and enhance the in vivo phosphorylation of gsk3_ on serine 9reduction of gckr expression inhibits wnt3a-induced phosphorylation of gsk3_ at serine 9 and decreases the accumulation of cytosolic _-catenin.
|
SIGNOR-148908
|
P15311
|
Q13464
| 0
|
phosphorylation
|
up-regulates
| 0.732
|
Activation of ezrin is mediated by initial pip2 binding and subsequent phosphorylation of threonine 567. We performed an in vitro kinase assay with 80 selected kinases on an ezrin peptide containing the t567 phosphorylation site (figure 3a). In this screen, we identified the mst and rock kinases as the most potent kinases for the ezrin peptide
|
SIGNOR-185567
|
P05129
|
P41594
| 1
|
phosphorylation
|
up-regulates activity
| 0.415
|
Thus, we showed that it is phosphorylation of Ser-839, not Thr-840, that is absolutely required for the unique Ca2+ oscillations produced by mGluR5 activation. The Thr-840 residue is important only in that it is permissive for the PKC-dependent phosphorylation of Ser-839.
|
SIGNOR-249289
|
Q8IXI1
|
O60260
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.2
|
PINK1 phosphorylates Miro, a component of the primary motor/adaptor complex that anchors kinesin to the mitochondrial surface. The phosphorylation of Miro activates proteasomal degradation of Miro in a Parkin-dependent manner.
|
SIGNOR-272726
|
Q9Y6D9
|
P53350
| 0
|
phosphorylation
|
up-regulates activity
| 0.464
|
These findings indicate mechanistic roles contributed by protein phosphorylation and Plk1 to the SAC activity of Mad1.Here, we have studied the phosphorylation of Mad1 and mapped using liquid chromatography-tandem mass spectrometry several phosphorylated amino acids in this protein. One phosphorylated residue, Thr680, was characterized to be important for the kinetochore localization of Mad1 and its SAC function.
|
SIGNOR-276173
|
O15111
|
O00141
| 0
|
phosphorylation
|
up-regulates activity
| 0.26
|
SGK1 directly phosphorylates IKKalpha at Thr 23 and indirectly activates IKKalpha at Ser 180.|SGK1 directly phosphorylates IKKalpha at Thr-23 and indirectly activates IKKalpha at Ser-180.
|
SIGNOR-278987
|
P01019
|
P08246
| 0
|
cleavage
|
up-regulates activity
| 0.275
|
Cathepsin G, elastase, and proteinase 3 are serine proteinases released by activated neutrophils. Cathepsin G can cleave angiotensinogen to release angiotensin II, but this activity has not been previously reported for elastase or proteinase 3. In this study we show that elastase and proteinase 3 can release angiotensin I from angiotensinogen and release angiotensin II from angiotensin I and angiotensinogen.
|
SIGNOR-256313
|
Q9BXW9
|
Q9NS91
| 0
|
ubiquitination
|
up-regulates activity
| 0.521
|
In summary, these findings suggest a model, where Rad18 promotes monoubiquitination of FANCD2, and associates with a functional complex involving Rad51, BRCA2, and FANCD2 in the repair of CPT induced stalled or collapsed forks.|In this study we focused on the role of Rad18 mediated activation of FANCD2 and its functional relationship with BRCA2 and Rad51 proteins in repair of CPT induced lesions.
|
SIGNOR-278712
|
P54764
|
Q14938
| 0
|
transcriptional regulation
|
up-regulates quantity
| 0.2
|
For example, within the NFI targetome, we identified 6 collagen genes, 13 genes encoding potassium channel or glutamate receptor subunits and a range of factors related to axon guidance (e.g. Slit1, Robo1, Epha4, Epha5, Epha8)
|
SIGNOR-268908
|
Q8IW41
|
P25685
| 1
|
phosphorylation
|
up-regulates
| 0.463
|
Phosphorylation of heat shock protein 40 (hsp40/dnajb1) by mitogen-activated protein kinase-activated protein kinase 5 (mk5/prak). Mk5 phosphorylates hsp40/dnajb1 in vivo at ser-149 or/and ser-151 and ser-171 in the c-terminal domain of hsp40/dnajb1. Mk5 modestly stimulates the atp hydrolyse activity of hsp40/hsp70 complex and enhances the repression of heat shock factor 1 driven transcription by hsp40/dnajb1.
|
SIGNOR-203464
|
P30872
|
Q03113
| 2
|
binding
|
up-regulates activity
| 0.25
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-256958
|
P37231
|
P45983
| 0
|
phosphorylation
|
down-regulates activity
| 0.527
|
The a/b domain of human ppargamma1 was phosphorylated in vivo, and this was abolished either by mutation of serine 84 to alanine (s84a) or coexpression of a phosphoprotein phosphatase. In vitro, this domain was phosphorylated by erk2 and jnk, and this was markedly reduced in the s84a mutant. Thus, phosphorylation of a mitogen-activated protein kinase site in the a/b region of ppargamma inhibits both ligand-independent and ligand-dependent transactivation functions.
|
SIGNOR-46518
|
P68400
|
P27695
| 1
|
phosphorylation
|
up-regulates activity
| 0.485
|
Here we demonstrate that APE/Ref-1 is phosphorylated by casein kinase II (CKII). This was shown for both the recombinant APE/Ref-1 protein (Km=0.55 mM) and for APE/Ref-1 expressed in COS cells. Phosphorylation of APE/Ref-1 did not alter the repair activity of the enzyme, whereas it stimulated its redox capability towards AP-1, thus promoting DNA binding activity of AP-1.
|
SIGNOR-250825
|
P24941
|
Q12800
| 1
|
phosphorylation
|
down-regulates
| 0.2
|
In vitro, lsf is phosphorylated by cyclin e/cyclin-dependent kinase 2 (cdk2), cyclin c/cdk2, and cyclin c/cdk3, predominantly on s309. Phosphorylation by cyclin c/cyclin-dependent kinase 2 following mitogenic stimulation of murine fibroblasts inhibits transcriptional activity of lsf during g1 progression
|
SIGNOR-184160
|
P12931
|
Q13972
| 1
|
phosphorylation
|
down-regulates activity
| 0.47
|
These proximal Src kinases could potentially directly or indirectly phosphorylate Rasgrf-1 upon BCR activation and thereby further increase its GEF activity.
|
SIGNOR-280133
|
Q9P2S2
|
Q14118
| 2
|
binding
|
up-regulates activity
| 0.262
|
The DGC is potentially recruited to the postsynaptic membrane though a direct neurexin–dystroglycan interaction and an indirect interaction with NL2 via the synaptic scaffolding protein S-SCAM.
|
SIGNOR-265460
|
P25440
|
Q9ULU4
| 1
|
relocalization
|
up-regulates activity
| 0.287
|
ZMYND8 and BRD2 therefore work together to protect H4Ac domains from HDAC activity.|Further, when BRD2 was depleted, ZMYND8 accumulation was lost (Fig. 2e), indicating that either BRD2, or the underlying H4Ac, is required for ZMYND8 loading.
|
SIGNOR-262036
|
Q16539
|
P17275
| 1
|
phosphorylation
|
up-regulates
| 0.502
|
These results clearly demonstrate that phosphorylation by p38 kinase is essential for the regulation of dmp1 transcription by junb and p300. phosphorylation of junb at ser-79 was found to be essential for its interaction with p300.
|
SIGNOR-127545
|
P49841
|
P52945
| 1
|
phosphorylation
|
down-regulates quantity
| 0.2
|
We show that glucose levels modulate PDX1 protein phosphorylation at a novel C-terminal GSK3 consensus that maps to serines 268 and 272. A decrease in glucose levels triggers increased turnover of the PDX1 protein in a GSK3-dependent manner, such that PDX1 phosphomutants are refractory to the destabilizing effect of low glucose
|
SIGNOR-255566
|
Q14957
|
P62258
| 2
|
binding
|
up-regulates quantity by stabilization
| 0.317
|
Here, we demonstrate that PKB/Akt directly phosphorylates NR2C on serine 1096 (S1096). In addition, we identify 14-3-3epsilon as an NR2C interactor, whose binding is dependent on S1096 phosphorylation. These data are all consistent with a model in which NR1 and NR2C oligomerize, PKB phosphorylates S1096, and 14-3-3ε binds to phosphorylated NR2C thereby promoting NR2C-containing NMDA receptor surface expression in cerebellar granule cells.
|
SIGNOR-262622
|
P53671
|
Q99801
| 1
|
phosphorylation
|
down-regulates activity
| 0.2
|
LIMK2 also downregulates NKX3.1 mRNA levels.|While WT-NKX3.1 was efficiently phosphorylated, the S185A mutant showed no phosphorylation ( xref A), confirming that LIMK2 only phosphorylates the S185 site in NKX3.1.
|
SIGNOR-278951
|
O75385
|
Q8N122
| 1
|
phosphorylation
|
down-regulates activity
| 0.704
|
ULK1 phosphorylates RPTOR at S792, S855, and S859.|When active, ULK1 inhibits MTOR complex 1 through phosphorylation of RPTOR, which has the effect of limiting RPTOR-mediated recruitment of MTOR substrates to MTOR complex 1 [ ].
|
SIGNOR-278461
|
P06748
|
P49450
| 2
|
binding
|
up-regulates activity
| 0.566
|
Here we demonstrate that prenucleosomal CENP-A is complexed with histone H4, nucleophosmin 1, and HJURPA minority of NPM1 cofractionated with prenucleosomal CENP-A, consistent with only a small proportion of total NPM1 stably associated with CENP-A. The partial overlap of NPM1 and HJURP with each other supports their formation of distinct prenucleosomal complexes with CENP-A. it is also possible that NPM1 plays a non essential role in the assembly of CENP-A nucleosomes or the nucleophosmin paralogues NPM2 and NPM3 may compensate for the absence of NPM1.
|
SIGNOR-263708
|
P25101
|
P09471
| 2
|
binding
|
up-regulates activity
| 0.272
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257253
|
Q15303
|
O00329
| 2
|
binding
|
up-regulates
| 0.395
|
Pi3k is the sole binding partner to six tyrosines of erbb3 and one in erbb4.
|
SIGNOR-146885
|
Q13315
|
Q96T60
| 1
|
phosphorylation
|
up-regulates
| 0.462
|
We demonstrate that pnkp is phosphorylated by the dna-dependent protein kinase (dna-pk) and ataxia-telangiectasia mutated (atm) in vitro. The major phosphorylation site for both kinases was serine 114, with serine 126 being a minor site. Purified pnkp protein with mutation of serines 114 and 126 had decreased dna kinase and dna phosphatase activities and reduced affinity for dna in vitro.
|
SIGNOR-176008
|
Q96G74
|
P68400
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
Here we show that phosphorylation of the human deubiquitinase DUBA (OTUD5) at a single residue, Ser177, is both necessary and sufficient to activate the enzyme. Treatment with CK2 could activate DUBA purified from E. coli, and this activity was associated with a species monophosphorylated at Ser177 (Fig. 1d).
|
SIGNOR-265872
|
P10636-2
|
P05771
| 0
|
phosphorylation
|
down-regulates activity
| 0.258
|
We have studied the relationship between the phosphorylation oftau by several kinases (MARK, PKA, MAPK, GSK3) and its assembly into PHFs. By contrast, MARK and PKA phosphorylate several sites within the repeats (notably theKXGS motifs including Ser262, Ser324, and Ser356, plus Ser320); in addition PKA phosphorylates somesites in the flanking domains, notably Ser214. This type of phosphorylation strongly reduces tau’s affinityfor microtubules, and at the same time inhibits tau’s assembly into PHFs.
|
SIGNOR-275442
|
P07949
|
Q16539
| 1
|
phosphorylation
|
up-regulates
| 0.332
|
Dually phosphorylated on thr-180 and tyr-182 by the map2ks map2k3/mkk3, map2k4/mkk4 and map2k6/mkk6 in response to inflammatory citokines, environmental stress or growth factors, which activates the enzyme.
|
SIGNOR-40493
|
P17676
|
O96013
| 0
|
phosphorylation
|
up-regulates activity
| 0.2
|
Importantly, we found that PAK4 enhanced CEBPB phosphorylation on Thr 235.|In summary, we showed that PAK4 mediated CEBPB activation upregulated CLDN4 expression to promote breast cancer cell migration and invasion.
|
SIGNOR-280055
|
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.