IdA
stringlengths 6
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| IdB
stringlengths 6
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| labels
float64 0
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| mechanism
stringclasses 40
values | effect
stringclasses 10
values | score
float64 0.1
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⌀ | sentence
stringlengths 10
1.63k
⌀ | signor_id
stringlengths 12
14
|
|---|---|---|---|---|---|---|---|
O15162
|
Q05655
| 0
|
phosphorylation
|
up-regulates
| 0.424
|
Following the induction of apoptosis, however, phosphorylation of serine residues decreased and it increased on threonine, consistent with the predicted pkc phosphorylation site at thr-161. Transfection of cho cells with scramblase and pkc_, but not scramblase or pkc_ alone, increased scramblase activity
|
SIGNOR-76904
|
P30408
|
Q08345
| 0
|
binding
|
up-regulates activity
| 0.424
|
Gao et al have demonstrated that in metastatic breast cancer cell, DDR1 interacts with cell surface Transmembrane 4 L Six Family Member 1 (TM4SF1) and regulates tumor dormancy and reactivation [3]. The interaction between DDR1 and TM4SF1 is collagen dependent and control Protein Kinase C Alpha (PKCa) mediated downstream JAK-STAT signaling pathway [3] (Figure 3). Interestingly the data also showed that TM4SF1 failed to interact with DDR2.
|
SIGNOR-272400
|
O75385
|
Q8TEV9
| 0
|
binding
|
down-regulates activity
| 0.424
|
While focusing on the role of SMCR8 during autophagy initiation, we found that kinase activity and gene expression of ULK1 are increased upon SMCR8 depletion.
|
SIGNOR-252029
|
Q03135
|
P08581
| 0
|
phosphorylation
|
up-regulates activity
| 0.424
|
Findings obtained using SNU-449 cells suggested that c-Met positively regulated CAV1 activity.|Inhibition of c-Met activation abolished phosphorylation of CAV1 on Tyrosine 14.
|
SIGNOR-279080
|
P60484
|
P49841
| 0
|
phosphorylation
|
down-regulates activity
| 0.424
|
Gsk3beta Phosphorylates pten at thr-366 in intact cells phosphorylation of pten at thr-366 reduces the activity of pten in cells
|
SIGNOR-236641
|
Q16832
|
P02452
| 0
|
binding
|
up-regulates activity
| 0.424
|
The Discoidin Domain Receptors (DDRs) constitute a unique set of receptor tyrosine kinases that signal in response to collagen.|Consistent with this view128, we showed that ectopic expression of DDR1b or DDR2 in HT1080 cells elicited a potent growth inhibitory effect only when the cells were cultured on 2D or 3D COL1 matrices, in agreement with previous studies in melanoma48, breast cancer76,78, and lung cancer cells74,75.
|
SIGNOR-272342
|
P29353
|
P29376
| 0
|
phosphorylation
|
up-regulates
| 0.424
|
Recently, we demonstrated that ltk utilizes shc and irs-1 as two major substrates and while both equally activate the ras pathway, only irs-1 suppresses apoptosis of hematopoietic cells.
|
SIGNOR-49625
|
Q92793
|
Q9H2X6
| 0
|
phosphorylation
|
up-regulates activity
| 0.424
|
Moreover, we show that HIPK2 strongly potentiates the transcriptional activity of CREB-binding protein.|We show that HIPK2 interacts with and phosphorylates several regions of CBP.
|
SIGNOR-279191
|
P09471
|
P25116
| 0
|
binding
|
up-regulates activity
| 0.424
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257011
|
Q9NYA1
|
Q14192
| 0
|
binding
|
down-regulates activity
| 0.424
|
FHL2/SLIM3 decreases cardiomyocyte survival by inhibitory interaction with sphingosine kinase-1.
|
SIGNOR-237775
|
P43699
|
Q9GZV5
| 0
|
binding
|
up-regulates
| 0.424
|
Taz also binds to the transcription factor ttf-1 that is involved in formation and differentiation of the lungs and respiratory epithelia, and stimulates the production of pulmonary surfactant.
|
SIGNOR-143472
|
O75376
|
P31749
| 0
|
phosphorylation
|
down-regulates
| 0.424
|
Akt-induced phosphorylation of n-cor at serine 1450 contributes to its misfolded conformational dependent loss (mcdl) in acute myeloid leukemia of the m5 subtype.
|
SIGNOR-198913
|
P37840
|
P00519
| 0
|
phosphorylation
|
up-regulates quantity
| 0.424
|
C-Abl interacts with alpha-synuclein and phosphorylates alpha-synuclein at Y39 (XREF_FIG) .
|
SIGNOR-279582
|
Q14247
|
P00519
| 0
|
phosphorylation
|
up-regulates activity
| 0.424
|
Because phosphorylation by c-Abl augments nmMLCK-cortactin interaction to a greater degree than does pp60src phosphorylation, it is likely that phosphorylation sites on nmMLCK unique to c-Abl (i.e., other than Y464 and Y846) are responsible for this enhanced protein-protein interaction.|Moreover, our data indicate that cortactin is itself rapidly phosphorylated on Y486 by c-Abl in EC after S1P (Figure 9).
|
SIGNOR-278504
|
P46939
|
Q7KZI7
| 0
|
phosphorylation
|
up-regulates
| 0.424
|
Par-1b, interacts with the utrophin-dg complex, and positively regulates the interaction between utrophin and dg. Ser1258 within r9 is specifically phosphorylated by par-1b.
|
SIGNOR-161915
|
P54578
|
P31749
| 0
|
phosphorylation
|
up-regulates activity
| 0.424
|
Phosphorylation and activation of ubiquitin-specific protease-14 by Akt regulates the ubiquitin-proteasome system|These results suggested S432 as a major and S143 as a minor phosphorylation site of Akt.
|
SIGNOR-265056
|
P60953
|
Q70Z35
| 0
|
guanine nucleotide exchange factor
|
up-regulates activity
| 0.423
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260572
|
P05412
|
Q00534
| 0
|
phosphorylation
|
up-regulates quantity
| 0.423
|
CDK6 additionally induced c-Jun phosphorylation, but did not activate JNK, as determined by examining JNK phosphorylation at various time-points.|CDK6 upregulates c-Jun expression.
|
SIGNOR-280222
|
Q9UKV8
|
Q9Y243
| 0
|
phosphorylation
|
up-regulates
| 0.423
|
Phosphorylation of argonaute 2 at serine-387 facilitates its localization to processing bodies, akt3-mediated phosphorylation of ago2 is a molecular switch between target mrna cleavage and translational repression activities of ago2
|
SIGNOR-178416
|
Q6SZW1
|
P45983
| 0
|
phosphorylation
|
down-regulates activity
| 0.423
|
C-Jun N-terminal kinase (JNK)-mediated phosphorylation of SARM1 regulates NAD+ cleavage activity to inhibit mitochondrial respiration|Here, we report that NAD+ cleavage activity of SARM1 is regulated by its own phosphorylation at serine 548. The phosphorylation of SARM1 was mediated by c-jun N-terminal kinase (JNK) under oxidative stress conditions, resulting in inhibition of mitochondrial respiration concomitant with enhanced activity of NAD+ cleavage. Nonphosphorylatable mutation of Ser-548 or treatment with a JNK inhibitor decreased SARM1 activity.
|
SIGNOR-275554
|
O95295
|
O14656
| 0
|
binding
|
up-regulates activity
| 0.423
|
In the present study, we used yeast two-hybrid analysis to identify a new binding partner of torsinA, the SNARE-associated protein snapin. We have reported that snapin shows a robust interaction with wild type and mutant torsinA. we have demonstrated that this portion of torsinA and/or the adjacent linker region has the additional role of recruiting snapin. we found that snapin, which binds SNAP-25 (synaptosome-associated protein of 25,000 Da) and enhances the association of the SNARE complex with synaptotagmin, is an interacting partner for both wild type and mutant torsinA.
|
SIGNOR-261170
|
Q92945
|
Q13315
| 0
|
phosphorylation
|
up-regulates
| 0.423
|
The atm kinase directly binds to and phosphorylates ksrp, leading to enhanced interaction between ksrp and pri-mirnas and increased ksrp activity in mirna processing
|
SIGNOR-172127
|
Q9H1Y0
|
P49411
| 0
|
binding
|
down-regulates activity
| 0.423
|
PINK1 interacts with the autophagy effector TUFm and phosphorylates TUFm at Ser222. These results indicated that p222-hTUFm sequestered more monomer Atg5 and reduced the conjugated Atg5-Atg12 complex to subdue mitophagy.
|
SIGNOR-266383
|
P08047
|
P24941
| 0
|
phosphorylation
|
up-regulates activity
| 0.423
|
Mutation of Sp1 Ser59 abrogates the cyclin ACDK augmentation of Sp1-dependent transcriptional transactivation
|
SIGNOR-248232
|
Q8TDD2
|
P31749
| 0
|
phosphorylation
|
up-regulates
| 0.423
|
Akt, a member of the ser-ine/threonine-specific protein kinase, was found to phosphorylate osx and dlx5
|
SIGNOR-252514
|
O00257
|
Q9H2X6
| 0
|
phosphorylation
|
up-regulates activity
| 0.423
|
In addition, HIPK2 phosphorylates Pc2 at several sites, including threonine 495.
|
SIGNOR-278484
|
Q13131
|
P17612
| 0
|
phosphorylation
|
down-regulates activity
| 0.423
|
These agents also enhanced phosphorylation of alpha-Ser(485/491) by the cAMP-dependent protein kinase. AMPK alpha-Ser(485/491) phosphorylation was necessary but not sufficient for inhibition of AMPK activity in response to forskolin/isobutylmethylxanthine.
|
SIGNOR-256112
|
P04198
|
Q7Z6Z7
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.423
|
HUWE1 ubiquitinates and directs MYCN degradation to the proteasome.
|
SIGNOR-278750
|
P06400
|
O96017
| 0
|
phosphorylation
|
up-regulates activity
| 0.423
|
Phosphorylation of prb at ser612 by chk1/2 leads to a complex between prb and e2f-1 after dna damageprb inhibits cell cycle progression through interactions with the e2f family of transcription factors. Here, we report that dna damage induced not only the dephosphorylation of prb at cdk phosphorylation sites and the binding of prb to e2f-1, but also the phosphorylation of prb at ser612. Phosphorylation of prb at ser612 enhanced the formation of a complex between prb and e2f-1
|
SIGNOR-153908
|
P28482
|
P07949
| 0
|
phosphorylation
|
up-regulates
| 0.423
|
We hypothesized that ret could directly phosphorylate fak and erk. erk 2 could be phosphorylated at y187 (y204 in erk1).
|
SIGNOR-140294
|
P08670
|
Q96GD4
| 0
|
phosphorylation
|
down-regulates
| 0.423
|
By identifying eight aurora-b phosphorylation sites on vimentin in vitro, we have demonstrated that vimentin-ser-72 is an in vitrophosphorylation site of aurora-b. in vitro analyses revealed that aurora-b phosphorylates vimentin at approximately 2 mol phosphate/mol of substrate for 30 min and that this phosphorylation dramatically inhibits vimentin filament formation.
|
SIGNOR-96057
|
P46531
|
Q96EB6
| 0
|
deacetylation
|
down-regulates
| 0.423
|
The acetylation marks on notch1-icd are removed by the deacetylase sirt1, suggesting that both deacetylation of notch1-icd and of histones inhibit notch signaling.
|
SIGNOR-195333
|
Q8NAP3
|
Q7Z6E9
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.423
|
Thus, RBBP6 induces ZBTB38 protein degradation, and this depends on the activity of the proteasome.We next tested whether RBBP6 might directly ubiquitinate ZBTB38.|We show that ZBTB38 is directly ubiquitinated by RBBP6 in human and mouse cells, in a process that is independent of p53 and MDM2, and leads to proteasomal degradation.
|
SIGNOR-278594
|
P07947
|
P29317
| 0
|
phosphorylation
|
up-regulates activity
| 0.423
|
EphA2 interacts with YES1 and phosphorylates YES1 at Tyr426 site.
|
SIGNOR-277556
|
P19429
|
P17612
| 0
|
phosphorylation
|
up-regulates activity
| 0.423
|
Phosphorylation at ser 23/24 (e.g., by pka or pkg) results in reduction in myofilament ca2+ sensitivity and an increase in crossbridge cycling rate, leading to acceleration of relaxation and an increase in power output but a reduced economy of contraction. Conversely, phosphorylation at ser 43/45 (by pkc) is associated with reduced maximum ca2+-activated force and decreased crossbridge cycling rates, which are likely to reduce power output and delay relaxation, with an increased economy of contraction.
|
SIGNOR-134605
|
P00734
|
P01009
| 0
|
binding
|
down-regulates activity
| 0.423
|
Alpha1PI, historically known as alpha1-antitrypsin, is a 51 kDa, 394 amino acid glycoprotein, synthesized in the liver, circulating at c. 1.3 mg mL-1 with a half-life of 4.5 days
|
SIGNOR-263524
|
O43623
|
P49841
| 0
|
phosphorylation
|
down-regulates activity
| 0.423
|
GSK3beta controls epithelial-mesenchymal transition and tumor metastasis by CHIP mediated degradation of Slug.|Phosphorylation of Slug by GSK3beta promotes CHIP binding and ubiquitin mediated proteolysis.
|
SIGNOR-279414
|
P55072
|
Q16827
| 0
|
dephosphorylation
|
down-regulates activity
| 0.423
|
An important aspect of this study is that tyrosine dephosphorylation of VCP by PTPRO sensitizes HepG2 cells to Doxorubicin, a chemotherapeutic drug commonly used for a variety of cancers.
|
SIGNOR-277063
|
Q14247
|
P27361
| 0
|
phosphorylation
|
up-regulates
| 0.422
|
Cortactin is regulated by multiple phosphorylation events, including phosphorylation of s405 and s418 by extracellular regulated kinases (erk)1/2. Erk1/2 phosphorylation of cortactin has emerged as an important positive regulatory modification, enabling cortactin to bind and activate the arp2/3 regulator neuronal wiskott-aldrich syndrome protein (n-wasp), promoting actin polymerization and enhancing tumor cell movement.
|
SIGNOR-165212
|
P06400
|
O14757
| 0
|
phosphorylation
|
up-regulates activity
| 0.422
|
These results suggest that ser612 is phosphorylated by chk1/2 after dna damage, leading to the formation of prb-e2f-1. phosphorylation of prb at ser612 enhanced the formation of a complex between prb and e2f-1
|
SIGNOR-153904
|
O00470
|
P35452
| 0
|
binding
|
up-regulates activity
| 0.422
|
We now show that the Hoxa-9 protein physically interacts with Meis1 proteins. Hox proteins from the other AbdB-like paralogs, Hoxa-10, Hoxa-11, Hoxd-12, and Hoxb-13, also form DNA binding complexes with Meis1b. DNA binding complexes formed by Meis1 with Hox proteins dissociate much more slowly than DNA complexes with Meis1 alone, suggesting that Hox proteins stabilize the interactions of Meis1 proteins with their DNA targets.
|
SIGNOR-241232
|
P46937
|
P49674
| 0
|
phosphorylation
|
down-regulates
| 0.422
|
Phosphorylation of YAP (S381) and TAZ (S311) by Lats1/2 primes subsequent phosphorylation events by Casein Kinase 1 (CK1d/e); this sequential phosphorylation results in recruitment of b-transducin repeat-containing proteins (b-TRCP; a subunit of the SCF ubiquitin E3 ligase) and consequently leads to degradation of YAP/TAZ
|
SIGNOR-201170
|
Q9NZQ3
|
P27361
| 0
|
phosphorylation
|
up-regulates
| 0.422
|
Spin90 was phosphorylated by erk1, which was, itself, activated by cell adhesion and platelet-derived growth factor. Such phosphorylation of spin90 likely promotes the interaction of the spin90.betapix.wasp complex and nck
|
SIGNOR-118747
|
P25963
|
P42574
| 0
|
cleavage
|
up-regulates quantity by stabilization
| 0.422
|
The cell-death protease cpp32 (caspase-3) in vitro specifically cleaved chicken and human ikappab-alpha at a conserved asp-ser sequence.Therefore, cleavage of I_B-_ by a CPP32-like protease could create what is sometimes called a super-repressor form of I_B-_ (20). That is, cleavage by CPP32 would block the ability of I_B-_ to undergo signal-induced degradation by removing the sites of signal-induced ubiquitination and by likely disrupting the ability of I_B-_ to become phosphorylated at critical Ser residues.
|
SIGNOR-51936
|
P0DP23
|
P68400
| 0
|
phosphorylation
|
down-regulates activity
| 0.422
|
Phosphorylation of CaM at four sites by CK2 was found to follow a sequential order, with Ser81 as the first, Thr79 as the second, and Ser101 or Thr117 as the third.
|
SIGNOR-266355
|
P31431
|
Q9BXY4
| 0
|
binding
|
up-regulates
| 0.422
|
Here, we show that rspo3 binds syndecan 4 (sdc4) and that together they activate wnt/pcp signaling.
|
SIGNOR-172756
|
Q99570
|
P20339
| 0
|
binding
|
up-regulates activity
| 0.422
|
Vps34 PI 3-kinase activity18 is stimulated by complex formation with the protein kinase Vps15|Rab5GTP binds Vps15, enhancing Vps34 activity
|
SIGNOR-260708
|
P12272
|
P07288
| 0
|
cleavage
|
down-regulates activity
| 0.422
|
Our study demonstrates that PTHrP is a substrate for PSA. The cleavage of the amino-terminal portion of PTHrP completely disrupts its ability to interact with the PTH/PTHrP receptor and thus inhibits its PTH-like activity. | Our data show that PSA proteolytically cleaves PTHrP (1-34) after either residue 22 or 23, generating three peptide fragments.
|
SIGNOR-270547
|
P12931
|
Q16827
| 0
|
dephosphorylation
|
down-regulates activity
| 0.422
|
SRC activation triggered by loss of PTPRO leads to c-CBL degradation.|These data corroborate that PTPRO directly dephosphorylates SRC at Y416.
|
SIGNOR-277004
|
O95837
|
P43657
| 0
|
binding
|
up-regulates activity
| 0.422
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257212
|
Q9Y2I6
|
P06493
| 0
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.422
|
In this study, we show that Nlp can be phosphorylated by cell cycle protein kinase Cdc2/cyclin B1. The phosphorylation sites of Nlp are mapped at Ser185 and Ser589. the phosphorylation at the site Ser589 by Cdc2/cyclin B1 plays an important role in Nlp protein stability probably due to its effect on protein degradation.
|
SIGNOR-259831
|
Q12778
|
Q8IW41
| 0
|
phosphorylation
|
up-regulates activity
| 0.422
|
The kinase MK5 phosphorylates and activates Foxo1 at serine 215, and this modification is required for Foxo1 to induce Rag transcription.
|
SIGNOR-280037
|
P12830
|
O00192
| 0
|
binding
|
up-regulates quantity by stabilization
| 0.422
|
To clarify the role of p120 in mammalian cells, we have knocked down p120 with siRNA in cells expressing epithelial (E-), placental (P-), neuronal (N-), and vascular endothelial (VE-) cadherins. We report that each of these cadherins, as well as α- and β-catenins, were rapidly degraded in the absence of p120, resulting in loss of cell–cell adhesion. The effect was clearly dose dependent, indicating that p120 expression levels may directly determine cadherin levels. Degradation of p120-uncoupled cadherin occurred after its arrival at the surface, indicating that p120 regulates cadherin turnover at the level of internalization or recycling. p120 homologues ARVCF and δ-catenin could substitute for p120, so at least one family member is likely required to maintain adhesion. Thus, cadherin complexes are rapidly turned over and degraded in mammalian cells in the absence of direct interaction with p120 or a p120 family member.
|
SIGNOR-252133
|
P04004
|
P02679
| 0
|
binding
|
down-regulates activity
| 0.422
|
Fibrinogen y-chain carboxyterminal (GQQHHLGGAKQAGDV) peptides inhibit fibrinogen, fibronectin (Fn), vitronectin, and von Willebrand factor (vWF) binding to the platelet glycoprotein Ilb-Illa complex (GP lIbII1a).
|
SIGNOR-251969
|
Q02548
|
P43405
| 0
|
phosphorylation
|
down-regulates activity
| 0.422
|
PAX5 tyrosine phosphorylation by SYK co-operatively functions with its serine phosphorylation to cancel the PAX5-dependent repression of BLIMP1: A mechanism for antigen-triggered plasma cell differentiation.
|
SIGNOR-269084
|
Q13009
|
Q96SB3
| 0
|
binding
|
up-regulates quantity
| 0.422
|
Spinophilin binding promotes the plasma membrane localization of Tiam1 and enhances the ability of Tiam1 to activate p70 S6 kinase.
|
SIGNOR-269175
|
P50221
|
P23760
| 0
|
binding
|
up-regulates activity
| 0.422
|
We show that Mox1 and Mox2 proteins are capable of interacting with Pax1 and Pax3. We propose that the Mox family of homeodomain proteins participates in the molecular signaling network regulating the diverse events of somite development through the physical interaction with the Pax1 and Pax3 members of the Pax family.
|
SIGNOR-222235
|
Q9ULZ1
|
Q9BYF1
| 0
|
cleavage
|
up-regulates activity
| 0.422
|
ACE2 hydrolyzes the hormone apelin-13 with high catalytic efficiency and cleaves apelin-36, whose C-terminal 13 amino acids are identical to those of apelin-13.
|
SIGNOR-256316
|
Q15306
|
O15054
| 0
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.422
|
JMJD3 seems to function by controlling expression of the transcription factor IRF4, which in turn is required for M2 polarization of macrophages in vitro and in vivo. Although this pathway is strongly supported by genetic.
|
SIGNOR-249540
|
P29317
|
O15197
| 0
|
binding
|
down-regulates activity
| 0.422
|
EphB6 is frequently silenced in invasive and metastatic cancers; however, its role in cancer progression is poorly understood. Here we show that EphB6 interacts with EphA2 and suppresses EphA2-mediated promotion of anoikis resistance in MCF7 breast cancer cells.
|
SIGNOR-273853
|
P50148
|
Q9UNW8
| 0
|
binding
|
up-regulates activity
| 0.422
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257341
|
P60981
|
Q96S53
| 0
|
phosphorylation
|
down-regulates activity
| 0.422
|
The present study provides evidence that TESK2 can phosphorylate cofilin and ADF specifically at Ser-3. Since actin-depolymerizing and -severing activities of cofilin/ADF are abrogated by phosphorylation at Ser-3, TESK2 seems to play an important role in actin filament dynamics by inhibiting cofilin/ADF activity.
|
SIGNOR-246707
|
P08069
|
Q13191
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.422
|
The ubiquitin ligase Cbl-b also ubiquitinated and degraded IGF-IR and inhibited the Akt/ERK-miR-200c-ZEB2 axis, leading to the repression of IGF-I-induced EMT.
|
SIGNOR-278607
|
Q09472
|
Q9Y6B2
| 0
|
binding
|
down-regulates activity
| 0.421
|
Here, we show that EID-1 is a potent inhibitor of differentiation and link this activity to its ability to inhibit p300 (and the highly related molecule, CREB-binding protein, or CBP) histone acetylation activity.
|
SIGNOR-253379
|
P23759
|
Q86X55
| 0
|
methylation
|
up-regulates
| 0.421
|
Carm1 specifically methylates Pax7 at multiple arginine residues in the N terminus of Pax7
|
SIGNOR-255898
|
P46937
|
P48730
| 0
|
phosphorylation
|
down-regulates
| 0.421
|
LATS1/2-mediated phosphorylation of a conserved serine in this region (Ser311 in human TAZ; Ser397 in human YAP) primes for further phosphorylation by CK1_/_ kinases (Ser314 on human TAZ; Ser400/403 in human YAP)
|
SIGNOR-230738
|
P20701
|
P12931
| 0
|
phosphorylation
|
down-regulates activity
| 0.421
|
PTKs of the JAK and SRC families have a regulatory role in LFA-1 affinity triggering, with JAKs showing a positive role (3), whereas SRCs possibly have a negative role.
|
SIGNOR-254741
|
P42229
|
Q9ULZ2
| 0
|
binding
|
up-regulates activity
| 0.421
|
STAP-1 was tyrosine-phosphorylated by activated c-kit. An in vitro binding assay suggested that the STAP-1 SH2 domain interacted with several tyrosine-phosphorylated proteins including c-kit and STAT5. These suggest that STAP-1 functions as an adaptor molecule downstream of c-kit in hematopoietic stem cells.
|
SIGNOR-261821
|
Q14247
|
Q15139
| 0
|
phosphorylation
|
down-regulates
| 0.421
|
Pkd phosphorylates cortactin in vitro and in vivo at serine 298 thereby generating a 14-3-3 binding motif. In vitro, a phosphorylation-deficient cortactin-s298a protein accelerated vca-arp-cortactin-mediated synergistic actin polymerization and showed reduced f-actin binding
|
SIGNOR-164756
|
P55036
|
Q9UNE7
| 0
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.421
|
S5a/Rpn10 is a ubiquitin (Ub)-binding protein that is a subunit of the 26S proteasome but also exists free in the cytosol. It binds poly-Ub chains through its two Ub-interacting motifs (UIMs). We discovered that, unlike typical substrates of Ub ligases (E3s), S5a can be ubiquitinated by all E3s tested including multimeric and monomeric Ring finger E3s (MuRF1, Siah2, Parkin, APC, and SCF(betaTRCP1)), the U-box E3, CHIP, and HECT domain E3s (E6AP and Nedd4) when assayed with UbcH5 or related Ub-conjugating enzymes.The short half-life of S5a presumably is because of the presence of the UIM domain and reflects the ubiquitination of free S5a by many E3s.
|
SIGNOR-272752
|
P48735
|
P36888
| 0
|
phosphorylation
|
down-regulates activity
| 0.421
|
FLT3 promotes mIDH2 acetylation through Y107 phosphorylation of mIDH2 that enhances ACAT1 recruitment,
|
SIGNOR-267632
|
Q16623
|
Q9NX95
| 0
|
relocalization
|
up-regulates activity
| 0.421
|
Conventional kinesin I heavy chain binds to syntabulin and associates with syntabulin-linked syntaxin vesicles in vivo. These findings suggest that syntabulin functions as a linker molecule that attaches syntaxin-cargo vesicles to kinesin I, enabling the transport of syntaxin-1 to neuronal processes.
|
SIGNOR-264812
|
P08047
|
P60484
| 0
|
dephosphorylation
|
down-regulates activity
| 0.421
|
Moreover, PTEN downregulates p75NTR expression by decreasing DNA-binding activity of Sp1 .|PTEN dephosphorylates the Sp1 transcription factor , the phosphorylation status of which directly impacts its ability to bind to some DNA promoter regions , .
|
SIGNOR-277119
|
Q9UKX7
|
P06493
| 0
|
phosphorylation
|
down-regulates
| 0.421
|
These results suggest that both ERK and Cdk1 directly phosphorylate Nup50 at Ser221 in intact cells|Notably, erk phosphorylation of the fg repeat region of nup50 reduced its affinity for importin-beta family proteins, importin-beta and transportin.
|
SIGNOR-188061
|
P46531
|
O00303
| 0
|
deubiquitination
|
up-regulates
| 0.421
|
The activated form of notch needs to be deubiquitinated before being processed by the gamma-secretase activity and entering the nucleus, where it fulfills its transcriptional function. The enzyme accounting for this deubiquitinase activity is eif3f, known so far as a translation initiation factor.
|
SIGNOR-170158
|
P00797
|
P19544
| 0
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.421
|
Here, we show that a splice variant of the Wilms' tumor protein lacking three amino acids WT1(-KTS) suppresses renin gene transcription
|
SIGNOR-252296
|
P48426
|
P68400
| 0
|
phosphorylation
|
up-regulates
| 0.421
|
Here, we demonstrate the partial purification of a protein kinase that phosphorylates the type iialpha pip kinase at a single site unique to that isoform - ser304. This kinase was identified as protein kinase ck2 (formerly casein kinase 2). Mutation of ser304 to aspartate to mimic its phosphorylation had no effect on pip kinase activity, but promoted both redistribution of the green fluorescent protein (gfp)-tagged enzyme in hela cells from the cytosol to the plasma membrane, and membrane ruffling.
|
SIGNOR-71014
|
P30279
|
Q9UKC9
| 0
|
binding
|
down-regulates quantity by destabilization
| 0.421
|
F-box protein FBXL2 targets cyclin D2 for ubiquitination and degradation to inhibit leukemic cell proliferation. Purified SCF complex components were incubated with V5-cyclin D2 and the full complement of ubiquitination reaction components (second lane from left) showing polyubiquitinated cyclin D2.
|
SIGNOR-272006
|
Q13563
|
P68400
| 0
|
phosphorylation
|
up-regulates
| 0.421
|
Ser(812) can be phosphorylated by ck2 in vitro and substitution s812a results in failure to incorporate phosphate in cultured epithelial cells.
|
SIGNOR-121572
|
P45983
|
Q8WTR2
| 0
|
dephosphorylation
|
down-regulates
| 0.421
|
Skrp1 was highly specific for c-jun n-terminal kinase (jnk) in vitro and effectively suppressed the jnk activation in response to tumor necrosis factor alpha or thapsigargin skrp1 does not bind directly to its target jnk, but co-precipitation of skrp1 with the mapk kinase mkk7, a jnk activator, was found in vitro and in vivo.
|
SIGNOR-117260
|
O00506
|
Q12923
| 0
|
dephosphorylation
|
down-regulates activity
| 0.421
|
To investigate dephosphorylation of CCM3 by FAP-1, phosphorylated GST-CCM3 was incubated with cdFAP-1, and reactions were analyzed by autoradiography. Again, GST-STK25 phosphorylated GST-CCM3 and possessed autophosphorylation activity. cdFAP-1 of 0.005 U were sufficient to dephosphorylate GST-CCM3 as well as the kinase GST-STK25.|More recently, the Golgi matrix protein GM130 was shown to function as a scaffold protein for STK25 and to activate STK25 through stimulation of autophosphorylation.
|
SIGNOR-248711
|
Q8NEB9
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.42
|
Given that VPS34 is activated by Src mediated tyrosine phosphorylation, we next determined if VPS34 was tyrosine phosphorylated following insulin treatment.|These data indicate that VPS34 is an effector of insulin-mediated signal transduction and that Src phosphorylation of VPS34 is required for this function.
|
SIGNOR-278456
|
P54646
|
P17612
| 0
|
phosphorylation
|
down-regulates
| 0.42
|
Pka associates with and phosphorylates ampk?1 At ser-173 to impede threonine thr-172 phosphorylation and thus activation of ampk1 by lkb1 in response to lipolytic signals
|
SIGNOR-161860
|
O75553
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.42
|
Dab1 is rapidly phosphorylated when neurons isolated from embryonic brains are stimulated with Reelin, and several tyrosines have been implicated in this response. Mice with phenylalanine substitutions of all five tyrosines (Tyr(185), Tyr(198), Tyr(200), Tyr(220), and Tyr(232)) exhibit a reeler phenotype, implying that tyrosine phosphorylation is critical for Dab1 function. Here we report that, although Src can phosphorylate all five tyrosines in vitro, Tyr(198) and Tyr(220) represent the major sites of Reelin-induced Dab1 phosphorylation in embryonic neurons.
|
SIGNOR-247080
|
Q6ZWJ1
|
P31751
| 0
|
phosphorylation
|
down-regulates activity
| 0.42
|
Akt2 phosphorylates Synip to regulate docking and fusion of GLUT4-containing vesicles. These data demonstrate that insulin activation of Akt2 specifically regulates the docking/fusion step of GLUT4-containing vesicles at the plasma membrane through the regulation of Synip phosphorylation and Synip-Syntaxin4 interaction.Thus, our data demonstrate that insulin-stimulated Akt2-dependent phosphorylation of Synip on serine residue 99 results in reduced binding interactions between Synip and Syntaxin4.
|
SIGNOR-262635
|
P05412
|
P63279
| 0
|
sumoylation
|
down-regulates activity
| 0.42
|
We report here that lysine 265 of c-Fos is conjugated by the peptidic posttranslational modifiers SUMO-1, SUMO-2, and SUMO-3 and that c-Jun can be sumoylated on lysine 257 as well as on the previously described lysine 229. Sumoylation of c-Fos preferentially occurs in the context of c-Jun/c-Fos heterodimers.|Inhibition of c-Fos and c-Jun sumoylation stimulates AP-1-dependent transcription activity.
|
SIGNOR-263001
|
P25116
|
P24158
| 0
|
cleavage
|
down-regulates activity
| 0.42
|
PAR1E and PAR2E (10 microM) were incubated in the presence of the different proteases | The enzymes were used at the following concentrations: 0.5 unit/mL thrombin, 2.5 nM trypsin, 20 nM plasmin, 20 nM cathepsin G, 20 nM elastase, 20 nM proteinase 3, and 2 units/mL calpain I and II|Protease-activated receptors (PARs) mediate cell activation after proteolytic cleavage of their extracellular amino terminus.|Protease-activated receptors (PARs) mediate cell activation after proteolytic cleavage of their extracellular amino terminus.|Plasmin, calpain and leukocyte elastase, cathepsin G, and proteinase 3 cleaved at multiple sites and would be expected to disable PAR1 by cleaving COOH-terminal to the activation site.
|
SIGNOR-263577
|
Q14938
|
O00712
| 0
|
transcriptional regulation
|
up-regulates quantity
| 0.42
|
We report that, in the absence of Nfia or Nfib, there is a marked reduction in the spinal cord expression of NFIX, and that NFIB can transcriptionally activate Nfix expression in vitro. These data demonstrate that NFIX is part of the downstream transcriptional program through which NFIA and NFIB coordinate gliogenesis within the spinal cord.
|
SIGNOR-268870
|
P29474
|
P12931
| 0
|
phosphorylation
|
up-regulates activity
| 0.42
|
Two kinases, i.e. abelson-tyrosine protein kinase (ABL)1 and Src were identified as eNOS Tyr81 kinases as their inhibition and down-regulation significantly reduced the basal and Yoda1-induced tyrosine phosphorylation and activity of eNOS.
|
SIGNOR-277520
|
O15350
|
P45983
| 0
|
phosphorylation
|
up-regulates activity
| 0.42
|
Therefore, it is likely that p73 recruitment to the \u0394Np73 promoter is mediated by its JNK-1-dependent phosphorylation.
|
SIGNOR-279219
|
P14598
|
P27361
| 0
|
phosphorylation
|
up-regulates
| 0.42
|
Upon activation, several serine residues on the cytosolic oxidase subunit p47phox become phosphorylated. Mitogen-activated protein kinase phophorylated only the peptide containing ser345/348.
|
SIGNOR-40821
|
Q7L7X3
|
Q13315
| 0
|
phosphorylation
|
up-regulates
| 0.42
|
The dna damage kinase ataxia telangiectasia mutated (atm) phosphorylates taos in vitro;radiation induces phosphorylation of tao on a consensus site for phosphorylation by the atmprotein kinase in cells.
|
SIGNOR-154171
|
Q92796
|
Q8NFP9
| 0
|
binding
|
up-regulates activity
| 0.42
|
Interestingly, a recent proteomic analysis (Lauks et al., 2012) revealed that Nbea binds SAP102, which interacts with glutamate receptors early in the biosynthetic route and regulates their targeting. This finding, along with the interaction of Nbea with the glycine receptor beta subunit (del Pino et al., 2011), further strengthens the notion that Nbea targets neurotransmitter receptors to synapses.
|
SIGNOR-266004
|
P07197
|
Q00535
| 0
|
phosphorylation
|
down-regulates quantity
| 0.42
|
Converse to the effect of PKA overexpression, overexpression of CDK5 and its activator, p35, decreased the association between spinophilin and NF-M as well as the expression of NF-M.|Moreover, CDK5 phosphorylates NF-M [ xref ], and this was also apparent in our data, given a dramatic molecular weight shift in the NF-M band following CDK5 overexpression.
|
SIGNOR-279683
|
P42345
|
Q9UHD2
| 0
|
phosphorylation
|
up-regulates activity
| 0.42
|
They later demonstrated that TANK-binding kinase 1 (TBK1) interacts with and phosphorylates mTOR on Ser 2159, to promote catalytic activity of mTOR [216].
|
SIGNOR-278237
|
O95140
|
Q7Z6Z7
| 0
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.42
|
AMBRA1 regulates mitophagy at two critical steps. Upon mitophagy stimulation, AMBRA1 mediates the HUWE1 E3 ubiquitin ligase translocation from cytosol to mitochondria (light blue). AMBRA1 acts as a cofactor for HUWE1 E3 ubiquitin ligase activity, favouring its binding to its substrate MFN2 (and maybe other OMM substrates) and targeting it to the proteasome
|
SIGNOR-272978
|
P98170
|
P31751
| 0
|
phosphorylation
|
up-regulates
| 0.42
|
Here, we demonstrate that akt, including akt1 and akt2, interacts with and phosphorylates x-linked inhibitor of apoptosis protein (xiap) at residue serine-87 in vitro and in vivo. Phosphorylation of xiap by akt protects xiap from ubiquitination and degradation in response to cisplatin. Moreover, autoubiquitination of xiap is also inhibited by akt.
|
SIGNOR-119492
|
P14921
|
Q13164
| 0
|
phosphorylation
|
up-regulates
| 0.42
|
9-cis retinoid x receptor alpha (rxr alpha) interacted with erk2 but not erk5 in intact cells, whereas ets-1 interacted preferentially with erk5. Increased phosphorylation of rxr alpha and ets-1 was detected in response to 1,25d. Activated erk2 and erk5 specifically phosphorylated rxr alpha and ets-1, respectively.Mutagenesis of ets-1 (t38a) reduced cyp24 promoter activity to levels observed with the dominant-negative mek5(a) and inhibited erk5-directed phosphorylation. Mutated rxr alpha (s260a) inhibited 1,25d-induced cyp24 promoter activity and abolished phosphorylation by activated erk2.
|
SIGNOR-88666
|
P62834
|
P52306
| 0
|
binding
|
up-regulates
| 0.42
|
Smggds has been previously shown to activate a wide variety of small gtpases, including the ras family members rap1a, rap1b, and k-ras, as well as the rho family members cdc42, rac1, rac2, rhoa, and rhob
|
SIGNOR-171482
|
Q15836
|
Q8NE79
| 0
|
binding
|
up-regulates activity
| 0.42
|
Taken together, these data demonstrate that Bves interacts with VAMP3 and facilitates receptor recycling both in vitro and during early development.
|
SIGNOR-237771
|
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