IdA
stringlengths 6
21
| IdB
stringlengths 6
21
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float64 0
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| mechanism
stringclasses 40
values | effect
stringclasses 10
values | score
float64 0.1
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stringlengths 10
1.63k
⌀ | signor_id
stringlengths 12
14
|
|---|---|---|---|---|---|---|---|
Q9ULB5
|
P35222
| 1
|
binding
|
up-regulates activity
| 0.568
|
At its C-terminus, cadherin interacts with β-catenin, which dynamically associates with α-catenin, a direct binding partner of filamentous actin
|
SIGNOR-265869
|
Q05655
|
P29474
| 1
|
phosphorylation
|
down-regulates activity
| 0.568
|
The phosphorylation of both S617 and S635 have also been shown to promote increased eNOS-derived NO release (Michell et al., 2002). The phosphorylaiton of S617 can be induced by PKA or Akt activity, and may serve to sensitize eNOS to calmodulin binding and modulate the phosphorylation of other eNOS sites
|
SIGNOR-251631
|
P28335
|
P50148
| 1
|
binding
|
up-regulates activity
| 0.568
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257221
|
Q9Y3A6
|
P49755
| 1
|
binding
|
up-regulates activity
| 0.568
|
P28 forms hetero-oligomeric complexes with p23. p23 is a major determinant for efficient targeting of p28 to the ERGIC
|
SIGNOR-261298
|
P12931
|
Q12879
| 1
|
phosphorylation
|
up-regulates activity
| 0.567
|
To gain further insight into the roles of Src and Fyn in the phosphorylation and regulation of the NMDA receptor, we have characterized the tyrosine phosphorylation of NR2A and NR2B by exogenous Src and FynIn the case of NR2A, three potential tyrosine phosphorylation sites have been proposed: Tyr1105, Tyr1267 and Tyr1387 (Zheng et al. 1998; Bi et al. 2000), all of which are similarly located in the C-terminal, cytoplasmic domain.
|
SIGNOR-247167
|
P12931
|
P33151
| 1
|
phosphorylation
|
down-regulates activity
| 0.567
|
cadherins also act to prevent epithelial cell motilityCadherin-cytoskeletal interactions occur through a number of adaptor proteins that interact with the C-terminal portion of the cadherin cytoplasmic tail, including the _-, _-, and _-catenin (6, 10). Additionally, VE-cadherin stability at the plasma membrane may be regulated by the binding of p120-catenin to the juxtamembrane region of the cytoplasmic tailWe show here that tyrosine phosphorylation of the adherens junction protein VE-cadherin at two critical tyrosines, Tyr-658 and Tyr-731, via tyrosine kinase activation or phosphatase inactivation was sufficient to prevent the binding of p120- and beta-catenin, respectively, to the cytoplasmic tail of VE-cadherinVE-cadherin becomes phosphorylated on Tyr-658 and/or Tyr-731 in response to Src kinase activity.
|
SIGNOR-246462
|
P31749
|
O43521
| 1
|
phosphorylation
|
down-regulates activity
| 0.567
|
Recombinant Akt could directly phosphorylate a GST-Bim(EL) fusion protein and identified the Akt phosphorylation site in the Bim(EL) domain as Ser(87). Further, we demonstrated that cytokine stimulation promotes Bim(EL) binding to 14-3-3 proteins. Finally, we show that mutation of Ser(87) dramatically increases the apoptotic potency of Bim(EL).
|
SIGNOR-252487
|
P42345
|
P30622
| 1
|
phosphorylation
|
up-regulates activity
| 0.567
|
By contrast to the phosphorylation of p150 Glued by PKA, inhibition of mTOR by rapamycin inhibited the ability of CLIP-170 to bind to microtubules, suggesting that phosphorylation by mTOR promotes CLIP-170 microtubule binding.|The new study confirms this physical interaction in animal cells and suggests that mTOR phosphorylates CLIP-170 on some, but not all, of the sites that are phosphorylated in vivo.
|
SIGNOR-279231
|
O15530
|
Q16512
| 1
|
phosphorylation
|
up-regulates
| 0.567
|
It is shown that activation in vitro and in vivo involves the activation loop phosphorylation of prk1/2 by 3-phosphoinositide-dependent protein kinase-1 (pdk1) /pdk1 phosphorylates the prks at their conserved activation loop threonines (thr-774 and thr-816 for prk1 and prk2, respectively)
|
SIGNOR-76640
|
P25116
|
P30679
| 1
|
binding
|
up-regulates activity
| 0.567
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257353
|
Q969H0
|
P24864
| 1
|
binding
|
down-regulates quantity by destabilization
| 0.567
|
Cdk2 (S384) and GSK3 (T380) prime cyclin E for destruction. The hyper-phosphorylated T380/S384 degron has high affinity for monomeric Fbw7α, which engages the remainder of the SCF to initiate cyclin E's ubiquitination by an E2 enzyme
|
SIGNOR-271643
|
Q12923
|
Q9BUL8
| 1
|
dephosphorylation
|
down-regulates activity
| 0.567
|
In addition, our yeast two-hybrid analysis revealed that CCM3 also binds to the 270-kDa nonreceptor protein tyrosine phos- phatase FAP-1 in a region predicted to contain the C- terminal phosphatase domain [23]. We have shown that this catalytic domain is capable to dephosphorylate CCM3. By dephosphorylation, FAP-1 might therefore negatively reg- ulate CCM3 activity and downstream signaling.
|
SIGNOR-248714
|
O75385
|
Q13501
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.567
|
ULK1 phosphorylates p62 at the Ser403 site.
|
SIGNOR-278349
|
Q9UI47
|
P12830
| 1
|
relocalization
|
up-regulates quantity
| 0.567
|
Overexpression of CTNNA3 in a CTNNA1 negative colon carcinoma cell line resulted in the reassembly of the adherens and tight junctions through the recruitment of CTNNA3 interacting partners such as E-cadherin, β-catenin, plakoglobin, and ZO-14
|
SIGNOR-265492
|
Q04759
|
P35568
| 1
|
phosphorylation
|
down-regulates activity
| 0.567
|
Protein kinase C Theta inhibits insulin signaling by phosphorylating IRS1 at Ser(1101).
|
SIGNOR-260906
|
P02649
|
P10636
| 1
|
binding
|
up-regulates activity
| 0.567
|
Isoform specific interactions of ApoE have been shown with the microtubule-associated protein tau, which forms the neurofibrillary tangle in this disease.|Phosphorylation of serine262 in domain I of tau decreases tau binding to microtubules and also abolishes binding by ApoE3.
|
SIGNOR-262588
|
Q8IVT5
|
P10398
| 1
|
binding
|
up-regulates activity
| 0.567
|
In mammals, RAF family kinases include three catalytically competent enzymes (ARAF, BRAF and CRAF) and two pseudokinases (KSR1 and KSR2) that have been described as scaffolds owing to their apparent ability to bridge RAF isoforms and their substrate, mitogen-activated protein kinase kinase (MEK).Kinase suppressor of Ras (KSR) pseudokinases were also shown to dimerize with kinase-competent RAFs to stimulate catalysis allosterically.
|
SIGNOR-273876
|
P45983
|
P40763
| 1
|
phosphorylation
|
up-regulates activity
| 0.567
|
Transfection of the cells with sirna specific for jnk1 revealed that jnk silencing reduced serine727 phosphorylation of stat3,
|
SIGNOR-235704
|
Q9H0K1
|
P35568
| 1
|
phosphorylation
|
down-regulates quantity
| 0.567
|
SIK2 is known to attenuate insulin signaling by phosphorylating IRS-1/Ser789
|
SIGNOR-265745
|
Q13191
|
P62993
| 1
|
binding
|
up-regulates activity
| 0.567
|
Here we show that in unstimulated Jurkat cells Cbl is co-immunoprecipitated with monoclonal antibody against Grb2.
|
SIGNOR-236051
|
P29323
|
P12931
| 1
|
binding
|
up-regulates
| 0.566
|
We propose src kinase as a downstream effector that mediates the neuron's response to eph receptor activation
|
SIGNOR-58142
|
P17706
|
P35968
| 1
|
dephosphorylation
|
down-regulates activity
| 0.566
|
We show that a TCPTP substrate-trapping mutant interacts with VEGFR2. Moreover, TCPTP dephosphorylates VEGFR2 in a phosphosite-specific manner, inhibits its kinase activity and prevents its internalization from the cell surface. |The autophosphorylation sites Tyr1054/1059 and Tyr1214 were dephosphorylated by TCPTP (Fig. 4B). Tyr996, the functional significance of which is currently uncertain (Olsson et al., 2006), was a TCPTP target as well.
|
SIGNOR-248399
|
O14672
|
P01133
| 1
|
cleavage
|
up-regulates activity
| 0.566
|
Like ADAM17, ADAM10 has also been implicated in the activation of specific EGFR ligands, especially EGF and betacellulin
|
SIGNOR-259840
|
P49336
|
P84022
| 1
|
phosphorylation
|
down-regulates
| 0.566
|
Similarly, tgf-?-Induced and cdk8/9-mediated phosphorylation of smad3 at threonine 179 (t179) is important for binding of the nedd4l e3 ubiquitin ligase, which accelerates smad3 turnover;cdk8 and cyclint-cdk9 showed a preference for s206 and s214 but also phosphorylated s186 and s195 in the case of smad1;and t179, s208 and s213 in the case of smad3.
|
SIGNOR-161557
|
O43295
|
P63000
| 1
|
gtpase-activating protein
|
down-regulates activity
| 0.566
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260518
|
Q68EM7
|
P63000
| 1
|
guanine nucleotide exchange factor
|
up-regulates activity
| 0.566
|
ARHGAP17 is a Rho GTPase-activating protein of Rac1
|
SIGNOR-272166
|
Q16611
|
P99999
| 1
|
relocalization
|
up-regulates
| 0.566
|
Allosteric activation of bak induces its intramembranous oligomerization into a proposed pore for cytochrome c efflux
|
SIGNOR-105206
|
P17612
|
P63104
| 1
|
phosphorylation
|
down-regulates activity
| 0.566
|
Phosphorylation by pka leads to modulation of 14-3-3zeta dimerization and affect its interaction with partner proteins. Substitution of ser58 to ala completely abolished phosphorylation of 14-3-3zeta by pka.
|
SIGNOR-143373
|
P06239
|
P27361
| 2
|
phosphorylation
|
up-regulates
| 0.566
|
The sh3 domain of lck modulates t-cell receptor-dependent activation of extracellular signal-regulated kinase through activation of raf-1.
|
SIGNOR-159168
|
P51610
|
O43889
| 1
|
binding
|
up-regulates activity
| 0.566
|
We also show that while interaction with HCF is not required for the ability of Luman to activate transcription when tethered to the GAL4 promoter, it appears to be essential for Luman to activate transcription through CRE sites.
|
SIGNOR-241372
|
Q9NVW2
|
Q86U70
| 1
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.566
|
Here we identify RLIM as a ubiquitin protein ligase that is able to target CLIM cofactors for degradation through the 26S proteasome pathway.
|
SIGNOR-272617
|
P28482
|
P10636
| 1
|
phosphorylation
|
down-regulates activity
| 0.566
|
Using nanoelectrospray mass spectrometry, we have undertaken an extensive comparison of phosphorylation in vitro by several candidate tau kinases, namely, JNK, p38, ERK2, and glycogen synthase kinase 3beta (GSK3beta). Between 10 and 15 sites were identified for each kinase. The three MAP kinases phosphorylated Ser202 and Thr205 but not detectably Ser199, whereas conversely GSK3beta phosphorylated Ser199 but not detectably Ser202 or Thr205. Phosphorylated Ser404 was found with all of these kinases except JNK. The MAP kinases may not be strictly proline specific: p38 phosphorylated the nonproline sites Ser185, Thr245, Ser305, and Ser356, whereas ERK2 was the most strict. All of the sites detected except Thr245 and Ser305 are known or suspected phosphorylation sites in paired helical filament-tau extracted from Alzheimer brains. Thus, the three MAP kinases and GSK3beta are importantly all strong candidates as tau kinases that may be involved in the pathogenic hyperphosphorylation of tau in Alzheimer's disease.
|
SIGNOR-249416
|
Q2M1Z3
|
P63000
| 1
|
gtpase-activating protein
|
down-regulates activity
| 0.566
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260489
|
Q07817
|
P21796
| 1
|
binding
|
down-regulates activity
| 0.566
|
The anti-apoptotic protein Bcl-x(L) closes VDAC by binding to it directly
|
SIGNOR-249614
|
P27361
|
P06239
| 2
|
phosphorylation
|
up-regulates activity
| 0.566
|
Phosphorylation at Ser-59 (or alternatively, its mutation to Glu) reverses the inhibition and allows interaction of the p56lck SH2 domain with p62.|phosphotyrosine-independent binding of p62 to the p56lck SH2 domain appears to provide an alternative pathway for p56lck signaling that is regulated by Ser-59 phosphorylation.
|
SIGNOR-249469
|
Q13315
|
P15336
| 1
|
phosphorylation
|
up-regulates
| 0.566
|
Here, we demonstrate that the protein kinase atm phosphorylates atf2 on serines 490 and 498 following ionizing radiation (ir). dose- and time-dependent phosphorylation of atf2 by atm that results in its rapid colocalization with gamma-h2ax and mrn components into ir-induced foci (irif)
|
SIGNOR-137619
|
Q96J02
|
O15350
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.566
|
Collectively, our present findings suggest that MDM2 promotes Itch-mediated degradation of p73 through the interaction with Itch in HeLa cells
|
SIGNOR-278699
|
Q08209
|
Q14934
| 1
|
dephosphorylation
|
up-regulates
| 0.566
|
Calcineurin directly dephosphorylates nfat resulting in the nuclear import of nfat.
|
SIGNOR-176379
|
P53350
|
Q99741
| 1
|
phosphorylation
|
up-regulates
| 0.566
|
Binding between cdc6 and plk1 occurs through the polo-box domain of plk1, and cdc6 is phosphorylated by plk1 on t37. These results suggest that plk1-mediated phosphorylation of cdc6 promotes the interaction of cdc6 and cdk1, leading to the attenuation of cdk1 activity, release of separase, and subsequent anaphase progression.
|
SIGNOR-169184
|
P06748
|
P49450
| 1
|
binding
|
up-regulates activity
| 0.566
|
Here we demonstrate that prenucleosomal CENP-A is complexed with histone H4, nucleophosmin 1, and HJURPA minority of NPM1 cofractionated with prenucleosomal CENP-A, consistent with only a small proportion of total NPM1 stably associated with CENP-A. The partial overlap of NPM1 and HJURP with each other supports their formation of distinct prenucleosomal complexes with CENP-A. it is also possible that NPM1 plays a non essential role in the assembly of CENP-A nucleosomes or the nucleophosmin paralogues NPM2 and NPM3 may compensate for the absence of NPM1.
|
SIGNOR-263708
|
P78552
|
P29597
| 1
|
binding
|
up-regulates
| 0.566
|
IL-4R, ?c, and IL-13R1 All contain proline-rich box-1 regions that bind jak1, jak3, and tyk2, respectivelyil-4 uses the type ii receptor, and IL-13R1 Binds tyk2. Il-13 results in activation of jak1 and tyk2 in hematopoietic and nonhematopoietic cells.
|
SIGNOR-100756
|
P24394
|
P35568
| 1
|
phosphorylation
|
up-regulates
| 0.566
|
Irs-1 and a homologous protein, irs-2 (also known as 4-phosphotyrosine substrate), are recruited to phosphorylated y497 of IL-4R After ligand binding, leading to phosphorylation and activation of irs-1 and irs-2.
|
SIGNOR-100768
|
O96017
|
Q9UQ84
| 1
|
phosphorylation
|
down-regulates activity
| 0.565
|
Inhibition of Exo1 activity by the DDR kinase Rad53.|Unlike Sae2/CtIP activation by CDK, Exo1 phosphorylation by Rad53 limits extended resection of ssDNA at uncapped telomeres and consequently minimizes further activation of the DDR.
|
SIGNOR-279028
|
P28482
|
P53355
| 2
|
phosphorylation
|
up-regulates
| 0.565
|
Dapk interacts with erk through a docking sequence within its death domain and is a substrate of erk. Phosphorylation of dapk at ser 735 by erk increases the catalytic activity of dapk both in vitro and in vivo
|
SIGNOR-132614
|
Q06413
|
P23409
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.565
|
Myogenin and MEF2 function synergistically to activate the MRF4 promoter during myogenesis.
|
SIGNOR-238652
|
P12931
|
Q9Y4K3
| 1
|
phosphorylation
|
up-regulates activity
| 0.565
|
To gain further insights into the molecular mechanisms, we employed mass spectrometry to identify the specific tyrosine residues of Traf6 that are phosphorylated by c-Src.By mutating these phosphorylation sites to phenylalanine, we disrupted Traf6-mediated polyubiquitination and subsequently observed the inactivation of AEP. This finding suggests that the phosphorylation of Traf6 by c-Src is crucial for AEP activation.
|
SIGNOR-277866
|
P12931
|
O43597
| 1
|
phosphorylation
|
up-regulates
| 0.565
|
Activation of signalling by fibroblast growth factor receptor leads to phosphorylation of the signalling attenuator human sprouty 2 (hspry2) on residue y55. we show that hspry2 is a direct substrate for src family kinases, including src itself.Phosphorylation of hspry2 is required for hspry2 to inhibit activation of the extracellular signal-regulated kinase pathway.
|
SIGNOR-131189
|
P0DP25
|
P29474
| 1
|
binding
|
up-regulates activity
| 0.565
|
Electrons flow from the C-terminal reductase domain of one NOS monomer to the N-terminal oxygenase domain of the other NOS monomer (Siddhanta et al., 1998). The primary mode of enzyme activation is the binding of calcium-bound calmodulin to the N-terminal CaM-binding domain. This facilitates a structure change and the flow of electrons from NADPH through the flavins to the oxygenase domain of the other eNOS monomer
|
SIGNOR-266339
|
Q9ULT6
|
Q9ULV1
| 1
|
ubiquitination
|
down-regulates quantity
| 0.565
|
Here we show that the cell-surface transmembrane E3 ubiquitin ligase zinc and ring finger 3 (ZNRF3) and its homologue ring finger 43 (RNF43) are negative feedback regulators of Wnt signalling. ZNRF3 is associated with the Wnt receptor complex, and inhibits Wnt signalling by promoting the turnover of frizzled and LRP6.
|
SIGNOR-260115
|
P05771
|
P14598
| 1
|
phosphorylation
|
up-regulates
| 0.565
|
Phosphopeptide mapping of p47(phox) showed that, as opposed to pkc zeta, pkc alpha, beta ii, and delta are able to phosphorylate all the major pkc sites. The use of p47(phox) mutants identified serines 303, 304, 315, 320, 328, 359, 370, and 379 as targets of pkc alpha, beta ii, and delta.Taken together, these results suggest that pkc alpha, beta ii, delta, and zeta expressed in human neutrophils can individually phosphorylate p47(phox) and induce both its translocation and nadph oxidase activation.
|
SIGNOR-89197
|
Q12851
|
Q13233
| 1
|
binding
|
up-regulates
| 0.565
|
The mekk1 associated with the gck carboxyl terminus is catalytically active.
|
SIGNOR-59682
|
P17655
|
Q15078
| 1
|
cleavage
|
up-regulates activity
| 0.565
|
Calpains also modulate the activity of CDK5. Physiologically, CDK 5 is activated by p35 and its cleaved product p25. The latter has a longer half life than p35 and therefore it is a more potent activator of CDK5. The cleavage of p35 to p25 is mediated by calpain
|
SIGNOR-251610
|
P53355
|
P28482
| 2
|
binding
|
down-regulates
| 0.565
|
Conversely, dapk promotes the cytoplasmic retention of erk, thereby inhibiting erk signaling in the nucleus.
|
SIGNOR-132610
|
P27361
|
Q13950
| 1
|
phosphorylation
|
up-regulates
| 0.565
|
In this study, we identified two phosphorylation sites in runx2 at ser301 and ser319 that are required for mapk-dependent activation of runx2 transcriptional activity and osteoblast differentiation.
|
SIGNOR-188347
|
O43586
|
Q99952
| 1
|
binding
|
up-regulates activity
| 0.565
|
These data confirm the importance of these residues to the binding interaction, and they suggest that much of the COOH-terminal region of PTP HSCF may be required for highest affinity binding to PST PIP.|Because this protein-protein interaction appears to be required for the dephosphorylation of PST PIP phosphotyrosines (20), it may be a potentially important new mechanism for the regulation of the cytoskeleton.
|
SIGNOR-262594
|
P27361
|
P17655
| 1
|
phosphorylation
|
up-regulates
| 0.565
|
Epidermal growth factor activates m-calpain (calpain ii), at least in part, by extracellular signal-regulated kinase-mediated phosphorylation.We now show that erk directly phosphorylates and activates m-calpain both in vitro and in vivo. We identified serine 50 as required for epidermal growth factor (egf)-induced calpain activation in vitro and in vivo.
|
SIGNOR-123083
|
P25116
|
Q03113
| 1
|
binding
|
up-regulates activity
| 0.565
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257403
|
Q96FW1
|
P04637
| 1
|
deubiquitination
|
up-regulates quantity by stabilization
| 0.565
|
Furthermore, although OTUB1 dramatically induced p53 deubiquitination, its mutant (S16A) and deletion mutant did not have this effec
|
SIGNOR-276528
|
P23443
|
Q9BPZ7
| 1
|
phosphorylation
|
down-regulates activity
| 0.565
|
Consistently, we detected in vivo Sin1 phosphorylation triggered by S6K1 and to a lesser extent, Akt1, but not other characterized AGC kinases (XREF_FIG and XREF_SUPPLEMENTARY).|Here we report that phosphorylation of Sin1 at Thr 86 and Thr 398 suppresses mTORC2 kinase activity by dissociating Sin1 from mTORC2.
|
SIGNOR-279568
|
B2RTY4
|
P61586
| 1
|
gtpase-activating protein
|
down-regulates activity
| 0.565
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260508
|
P78536
|
O14944
| 1
|
cleavage
|
up-regulates activity
| 0.565
|
ADAM17 is involved in the release and activation of several growth factors and cytokine receptor ligands. Among the growth factors activated by ADAM17 are TGF-alpha, amphiregulin, epiregulin and HB-EGF
|
SIGNOR-259843
|
Q9C004
|
Q15569
| 1
|
binding
|
down-regulates activity
| 0.565
|
Spry4 negatively regulates the kinase activity of TESK1 by associating with it through the C-terminal cysteine-rich region of Spry4
|
SIGNOR-253032
|
P63279
|
O75030
| 1
|
ubiquitination
|
down-regulates
| 0.565
|
Furthermore, we identified lysine 201 as a potential ubiquitination site. A lysine to arginine mutation abolished mitf (k201r) degradation by hubc9 in vivo.
|
SIGNOR-75117
|
Q14318
|
P42345
| 1
|
binding
|
down-regulates
| 0.565
|
Fkbp38 binds to mtor and inhibits its activity in a manner similar to that of the fkbp12-rapamycin complex.
|
SIGNOR-159013
|
P12931
|
P78352
| 1
|
phosphorylation
|
up-regulates
| 0.565
|
These results indicate that psd-95 phosphorylation by src facilitates the integration of pyk2 to psd-95 signal complex, the activation of pyk2/src, as well as the subsequent tyrosine phosphorylation of nr2a, which ultimately results in the upregulation of nmda receptor function and synaptic transmission.
|
SIGNOR-205120
|
O95644
|
P60568
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.565
|
Together, our results demonstrate that dnNFAT inhibits the production of IL-2. Thus, the NFAT transcription factor contributes to the regulation of IL-2 gene expression and therefore plays a critical role in the initiation of immune responses.
|
SIGNOR-275405
|
P17706
|
P09619
| 1
|
dephosphorylation
|
down-regulates activity
| 0.564
|
The PDGF beta receptor is negatively regulated by protein tyrosine phosphatases (PTPs).|In summary, our findings identify TC-PTP as a previously unrecognized negative regulator of PDGF beta receptor signaling and support the general notion that PTPs display site selectivity in their action on tyrosine kinase receptors.The fact that two of the investigated PDGF β receptor sites, Y1021 and Y771, displayed a larger increase in phosphorylation than Y579 and Y751 in TC-PTP ko MEFs indicated that these two sites are preferred substrates for TC-PTP.
|
SIGNOR-248389
|
P28702
|
Q07869
| 1
|
binding
|
up-regulates
| 0.564
|
Although the three ppar subtypes are closely related and bind to similar dna response elements as heterodimers with the 9-cis retinoic acid receptor rxr, each subserves a distinct physiology
|
SIGNOR-105448
|
Q7Z5H3
|
P61586
| 1
|
gtpase-activating protein
|
down-regulates activity
| 0.564
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260476
|
P17252
|
P47712
| 1
|
phosphorylation
|
up-regulates
| 0.564
|
Pkcalfa, but not pkcbeta, is the predominant cpkc isoenzyme required for cpla2 protein phosphorylation and maximal induction of cpla2 enzymatic activity.
|
SIGNOR-149406
|
P62873
|
P42336
| 1
|
binding
|
up-regulates
| 0.564
|
Gbetagamma subunits released from gi can activate pi3k (phosphoinositide 3-kinase), and can be therefore implicated in smo-dependent activation of akt
|
SIGNOR-145119
|
P31749
|
Q14457
| 1
|
phosphorylation
|
down-regulates activity
| 0.564
|
In addition, pharmacological inhibition of AKT1 enhanced BECN1 stability in both assays, leaving about twice the amount of BECN1 at 90 min compared to control (Fig. 4i\u2013l).|The oncogenic kinase AKT1 phosphorylates BECN1 at positions S234, S295, which leads to sequestration of this peripheral membrane binding protein xref to the cytoskeleton with the result of inhibition of autophagy xref .
|
SIGNOR-279666
|
P56524
|
Q02078
| 1
|
binding
|
down-regulates
| 0.564
|
We discovered that mef2 interacts with histone deacetylases (hdacs) 4 and 5, resulting in repression of the transcriptional activity of mef2.
|
SIGNOR-76231
|
O43318
|
Q99558
| 1
|
phosphorylation
|
up-regulates activity
| 0.564
|
The kinase TAK1 can activate the NIK-I kappaB as well as the MAP kinase cascade in the IL-1 signalling pathway|Activated TAK1 phosphorylates NIK, which stimulates IKK-alpha activity. Our results indicate that TAK1 links TRAF6 to the NIK-IKK cascade in the IL-1 signalling pathway.
|
SIGNOR-262833
|
P31749
|
Q01813
| 1
|
phosphorylation
|
up-regulates quantity
| 0.564
|
A reduction in AKT expression as a result of AKT1 shRNA expression or MK-2206 treatment decreased the half-life of endogenous PFKP, while the expression of active Myr-AKT1 prolonged the half-life of PFKP.|In addition, depletion of endogenous PFKP and reconstitution of RNAi resistant WT Flag-rPFKP or Flag-rPFKP S386A expression in U251 or U87 and EGFRvIII cells revealed that the S386A mutation abolished PFKP phosphorylation induced by EGF, constitutively active Myr-AKT1, and EGFRvIII.
|
SIGNOR-279788
|
Q8WXE9
|
P63027
| 1
|
binding
|
up-regulates quantity
| 0.564
|
the monomeric adaptor proteins AP180/CALM and stonin-2 are required for the efficient retrieval of synaptobrevin II (sybII) and synaptotagmin-1 respectively. Furthermore, recent studies have revealed that sybII and synaptotagmin-1 interact with other SV cargoes to ensure a high fidelity of retrieval.
|
SIGNOR-264113
|
Q15120
|
P29803
| 1
|
phosphorylation
|
down-regulates
| 0.563
|
Pdh2 was found to be very similar to pdh1 / in the mechanism of inactivation by phosphorylation of three sites;and (iv) in the phosphorylation of sites 1 and 2 by pdk3 / (ser-264 (site 1), ser-271 (site 2), and ser-203 (site 3)
|
SIGNOR-143974
|
Q8N0Z6
|
Q09472
| 1
|
binding
|
up-regulates activity
| 0.563
|
DNA damage activates ATM kinase which then phosphorylates Strap at Ser 203 (red circles). Phosphorylated Strap is stabilized and undergoes nuclear accumulation where it assembles into a co-activator complex, which includes p300 and cofactors such as JMY
|
SIGNOR-262646
|
Q15466
|
O00482
| 1
|
binding
|
down-regulates
| 0.563
|
Modulation of human nuclear receptor lrh-1 activity by phospholipids and shpthe human nuclear receptor liver receptor homolog 1 (hlrh-1) plays an important role in the development of breast carcinomas. This orphan receptor is efficiently downregulated by the unusual co-repressor shp
|
SIGNOR-134202
|
Q9UH77
|
Q9H4A3
| 1
|
binding
|
down-regulates quantity by destabilization
| 0.563
|
CUL3 assembles with BTB proteins to form Cullin-RING E3 ubiquitin ligase complexes. To explore how a CUL3-KLHL3 complex might operate, we immunoprecipitated KLHL3 and found that it associated strongly with WNK isoforms and CUL3. These results suggest that the CUL3-KLHL3 E3 ligase complex regulates blood pressure via its ability to interact with and ubiquitylate WNK isoforms.
|
SIGNOR-272099
|
P28482
|
P19419
| 1
|
phosphorylation
|
up-regulates activity
| 0.563
|
We demonstrate that elk-1, a protein closely related to p62tcf in function, is a nuclear target of two members of the map kinase family, erk1 and erk2, erk1 phosphorylates five c-terminal sites in elk-1 (s324,t336, s383, s389 and s422) with varying degrees of efficiency.
|
SIGNOR-235455
|
P06493
|
Q8NFH5
| 1
|
phosphorylation
|
down-regulates activity
| 0.563
|
Collectively, these data show that mitotic hyperphosphorylation of Nup53 by CDK1 and PLK1 contributes to its removal from NPCs.|The combined mutation of the CDK1 and PLK1 sites to phosphomimetic residues almost completely abolished NPC integration of Nup53, indicating that hyperphosphorylation of Nup53 might be incompatible with its NPC association.
|
SIGNOR-278917
|
Q00535
|
P17600
| 1
|
phosphorylation
|
up-regulates
| 0.563
|
Synapsin i (syni), a major sv phosphoprotein involved in the regulation of sv trafficking and neurotransmitter release, is one of the presynaptic substrates of cdk5, which phosphorylates it in its c-terminal region at ser(549) (site 6) and ser(551) (site 7). Phosphorylation of syni by cdk5 is physiologically regulated and enhances its binding to f-actin.
|
SIGNOR-78883
|
Q02548
|
Q04727
| 1
|
binding
|
down-regulates activity
| 0.563
|
Grg4 efficiently represses the transcriptional activity of Pax5 in an octapeptide-dependent manner. Similar protein interactions resulting in transcriptional repression were also observed between distantly related members of both the Pax2/5/8 and Groucho protein families
|
SIGNOR-269083
|
P56945
|
P27986
| 1
|
binding
|
up-regulates activity
| 0.563
|
One such SH2-domain containing protein is the p85 subunit of PI3K, as its docking with tyrosine-phosphorylated p130cas activates the p110alpha subunit| tyrosine-165 and tyrosine-128 on p130cas both are phosphorylated to a greater extent in parental versus paxillin Y88F mutan
|
SIGNOR-263980
|
P43250
|
P25025
| 1
|
phosphorylation
|
down-regulates quantity
| 0.563
|
GRK2 mainly phosphorylates CXCR1, while GRK6 mediates CXCR2 phosphorylation .|Overexpression of GRK6 or treatment with CXCR2 siRNA suppresses CXCR2 expression in dorsal root ganglion and significantly reduces pain in animal model of neuropathic pain , .
|
SIGNOR-279782
|
P12931
|
Q13813
| 1
|
phosphorylation
|
up-regulates
| 0.563
|
Using mutagenesis on recombinant peptides, we identified the residue y1176 located in the calpain cleavage site of alpha ii-spectrin, near the sh3 domain, as an in vitro substrate for src kinase and lmw-ptp a. phosphorylation of this residue decreases spectrin sensitivity to calpain in vitro.
|
SIGNOR-86718
|
P01106
|
O60885
| 2
| null |
down-regulates activity
| 0.562
|
Conversely, MYC inhibits BRD4's HAT activity, suggesting that MYC regulates its own transcription by limiting BRD4-mediated chromatin remodeling of its locus.
|
SIGNOR-262047
|
P49841
|
P10070
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.562
|
The degradation of Gli2 requires the phosphorylation of a cluster of numerous serine residues in its carboxyl terminus by protein kinase A and subsequently by casein kinase 1 and glycogen synthase kinase 3.
|
SIGNOR-249590
|
P06213
|
Q99704
| 1
|
phosphorylation
|
up-regulates activity
| 0.562
|
Insulin receptor-mediated p62dok tyrosine phosphorylation at residues 362 and 398. p62(dok) is a direct substrate for the IR tyrosine kinase and that phosphorylation at Tyr(362) and Tyr(398) plays an essential role for p62(dok) to interact with its effectors and negatively regulate the insulin signaling pathway.
|
SIGNOR-251307
|
P06241
|
P78352
| 1
|
phosphorylation
|
up-regulates
| 0.562
|
Psd-95 is phosphorylated either by purified src/fyn kinases in vitro or by co-expression of constitutively active src/fyn in cos7 cells. psd-95 tyr(523) phosphorylation contributes to the post-ischaemic over-activation of nmda receptors.
|
SIGNOR-180449
|
P04637
|
O15392
| 1
|
binding
|
down-regulates
| 0.562
|
This study identifies the anti-apoptotic survivin gene as a p53-repressed gene;notably, survivin repression by p53 is shown to be distinct from p53-dependent growth arrest.
|
SIGNOR-111971
|
Q9Y618
|
P10275
| 1
|
acetylation
|
down-regulates
| 0.562
|
In this study we assessed the effect of smrt and dax-1 on ar and pr activity in the presence of both agonists and partial antagonists. We show that smrt and dax-1 repress agonist-dependent activity of both receptors, and the mechanism of repression includes disruption of the receptor dimer interactions rather than recruitment of histone deacetylases.
|
SIGNOR-101286
|
O60885
|
P01106
| 2
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.562
|
We report that BRD4 phosphorylates MYC at Thr58, leading to MYC ubiquitination and degradation, thereby regulating MYC target genes.
|
SIGNOR-262046
|
Q13627
|
P53805
| 1
|
phosphorylation
|
up-regulates
| 0.562
|
In the present study, dyrk1a is shown to directly interact with and phosphorylate rcan1 at ser112 and thr192 residues. Dyrk1a-mediated phosphorylation of rcan1 at ser112 primes the protein for the gsk3_-mediated phosphorylation of ser108.
|
SIGNOR-102290
|
Q13501
|
Q8IZQ1
| 1
|
binding
|
up-regulates quantity
| 0.562
|
We show here that p62 is required to recruit the large phosphoinositide-binding protein ALFY to cytoplasmic p62 bodies generated upon amino acid starvation or puromycin-treatment. ALFY, as well as p62, is required for formation and autophagic degradation of cytoplasmic ubiquitin-positive inclusions.
|
SIGNOR-266792
|
Q16633
|
P09086
| 1
|
binding
|
up-regulates
| 0.562
|
We have shown previously that both octamer binding transcription factors, namely the ubiquitous oct-1 and the b cell-specific oct-2a protein, can be enhanced in transcriptional activity by their association with the b cell-specific coactivator protein bob1, also calledobf-1or oca-b.
|
SIGNOR-42278
|
Q86TM6
|
P04035
| 1
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.562
|
In the presence of the ubiquitin-conjugating enzyme UBC7, the RING-H2 finger has in vitro ubiquitination activity for Lys(48)-specific polyubiquitin linkage, suggesting that human HRD1 is an E3 ubiquitin ligase involved in protein degradation.Human HRD1 appears to be involved in the basal degradation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase but not in the degradation that is regulated by sterols.
|
SIGNOR-272594
|
P12931
|
Q13177
| 1
|
phosphorylation
|
up-regulates
| 0.562
|
Pak2 became tyrosine phosphorylated in its n-terminal regulatory domain, where y130 was identified as the major phosphoacceptor site. Tyrosine phosphorylation-mediated superactivation of pak2 could be induced by overexpression of different src kinases or by inhibiting cellular tyrosine phosphatases with pervanadate and could be blocked by the src kinase inhibitor pp1 or by mutating the y130 residue.
|
SIGNOR-92460
|
Q13535
|
Q14566
| 1
|
phosphorylation
|
up-regulates
| 0.562
|
Together these data strongly support the conclusion that mec1 directly targets the s/tq sites in mcm4 and mcm6, although it is formally possible that mec1 and mrc1 activate a different s/tq-directed kinase to target mcm4 and mcm6.
|
SIGNOR-169450
|
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