IdA
stringlengths 6
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| IdB
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stringclasses 40
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stringclasses 10
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float64 0.1
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1.63k
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14
|
|---|---|---|---|---|---|---|---|
P29320
|
P12931
| 1
|
binding
|
up-regulates
| 0.528
|
We propose src kinase as a downstream effector that mediates the neuron's response to eph receptor activation.
|
SIGNOR-58139
|
Q9UER7
|
P37173
| 1
|
binding
|
up-regulates
| 0.528
|
Tgf-beta-induced apoptosis is mediated by the adapter protein daxx that facilitates jnk activation
|
SIGNOR-109542
|
P06493
|
Q96EB6
| 1
|
phosphorylation
|
up-regulates
| 0.528
|
We identified cyclinb/cdk1 as a cell cycle-dependent kinase that forms a complex with and phosphorylates sirt1. Mutation of two residues phosphorylated by cyclin b/cdk1 (threonine 530 and serine 540) disturbs normal cell cycle progression and fails to rescue proliferation defects in sirt1-deficient cells
|
SIGNOR-182863
|
P06213
|
P22681
| 2
|
phosphorylation
|
up-regulates activity
| 0.528
|
Insulin receptor phosphorylates Cbl on tyrosines 371, 700, and 774 in the presence of APS. This phosphorylation event is required for the recruitment of Crk to the CAP/Cbl complex and for the subsequent activation of GLUT4 translocation.
|
SIGNOR-251304
|
Q15131
|
P15036
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.528
|
Altogether, these results suggest that CDK10/cyclin M directly controls ETS2 degradation through the phosphorylation of these two serines.
|
SIGNOR-260914
|
P31751
|
P55211
| 1
|
phosphorylation
|
down-regulates
| 0.528
|
Akt phosphorylated recombinant casp9 in vitro on serine-196 and inhibited its protease activity
|
SIGNOR-61561
|
P49715
|
P17947
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.528
|
Activation of C/EBPα induces PU.1 expression, cell cycle arrest, and differentiation in 32D cells expressing FLT3/ITD
|
SIGNOR-261531
|
Q15569
|
P23528
| 1
|
phosphorylation
|
down-regulates activity
| 0.528
|
Like TESK1, TESK2 phosphorylated cofilin specifically at Ser-3 and induced formation of actin stress fibers and focal adhesionsExpression of cofilin or S3A-cofilin into HeLa cells induced marked decreases in rhodamine-phalloidin staining due to the actin binding and -depolymerizing activity of cofilin
|
SIGNOR-246723
|
Q96HP0
|
P63000
| 1
|
guanine nucleotide exchange factor
|
up-regulates activity
| 0.528
|
Dock6 is a guanine nucleotide exchange factor (GEF) that activates the Rho family guanosine triphosphatases Rac1 and Cdc42 to regulate the actin cytoskeleton.
|
SIGNOR-275670
|
Q5S007
|
P10636
| 1
|
phosphorylation
|
down-regulates
| 0.528
|
Lrrk2 directly phosphorylates tubulin-associated tau, but not free tau;(iii) lrrk2 phosphorylates tau at thr181 as one of the target sites;. furthermore, we revealed that lrrk2-mediated phosphorylation of tau reduces its tubulin-binding ability.
|
SIGNOR-195756
|
P51608
|
P26358
| 1
|
binding
|
up-regulates activity
| 0.528
|
Thus, these results indicate that MeCP2-interacting Dnmt1 has significant maintenance DNA methyltransferase activity and that MeCP2 does not vanish Dnmt1 enzymatic activity.
|
SIGNOR-264541
|
Q05655
|
P31431
| 1
|
phosphorylation
|
up-regulates activity
| 0.528
|
The phosphorylation state of Ser(183) in the cytoplasmic tail of syndecan-4 determines the binding affinity of the cytoplasmic tail to phosphatidylinositol 4,5-bisphosphate (PIP(2)), the capacity of the tail to multimerize, and its ability to activate protein kinase C (PKC) alpha. We sought to identify the kinase responsible for this phosphorylation and to determine its downstream effects on PKCalpha activity and on endothelial cell function. Among several PKC isoenzymes tested, only PKCalpha and -delta were able to specifically phosphorylate Ser(183) in vitro. However, studies in cultured endothelial cells showed that the phosphorylation level of syndecan-4 was significantly reduced in endothelial cells expressing a dominant negative (DN) PKCdelta but not a DN PKCalpha mutant.
|
SIGNOR-116265
|
Q96J02
|
O43353
| 1
|
binding
|
up-regulates activity
| 0.528
|
ITCH preferentially binds to RIPK2, promoting its K63-linked ubiquitination while simultaneously protecting YAP protein levels and maintaining its nuclear localization in CRC cells.
|
SIGNOR-280458
|
P15172
|
P51532
| 1
|
binding
|
up-regulates
| 0.528
|
Myod targets brg1 to the myogenin promoter during the initiation of myogenesis in tissue culture models for skeletal muscle differentiation /initiation of myogenin transcription is dependent upon myod, the pbx homeodomain factor, and swi/snf chromatin-remodeling enzymes
|
SIGNOR-151685
|
P22681
|
P06213
| 2
|
ubiquitination
|
down-regulates
| 0.528
|
Aps couples c-cbl to theinsulinreceptor, resulting in ubiquitination of theinsulinreceptor
|
SIGNOR-109688
|
P23458
|
P29597
| 1
|
phosphorylation
|
up-regulates
| 0.527
|
These results indicate that tyk2 is activated by phosphorylation on tyr-1054 and/or tyr-1055 and that this phosphorylation requires another kinase, most likely jak1.
|
SIGNOR-43080
|
P12931
|
P29350
| 2
|
phosphorylation
|
up-regulates
| 0.527
|
Recombinant shp-1 had elevated activity subsequent to phosphorylation by src in vitro, and shp-1 variants with mutated phosphorylation sites in the c terminus, shp-1 y538f, and shp-1 y538f,y566f were less active toward src-generated phosphoproteins in intact cells.
|
SIGNOR-120492
|
P00519
|
P09619
| 2
|
phosphorylation
|
down-regulates activity
| 0.527
|
C-Abl phosphorylates three tyrosine residues on PDGFR-β (Y686, Y934, Y970) | These data are exciting as they indicate that abl kinases not only are activated by pdgfr and promote pdgfr-mediated proliferation and migration,but also act in an intricate negative feedback loop to turn-off pdgfr-mediated chemotaxis.
|
SIGNOR-260931
|
P27105
|
P11166
| 1
|
binding
|
down-regulates activity
| 0.527
|
Similar to the results obtained in the RBC, Glut1 and stomatin immunoprecipitated with each other in lysates of Clone 9 cells. The above results suggest that stomatin is closely associated with Glut1 in the plasma membrane and that overexpression of stomatin results in a depression in the basal rate of glucose transport.
|
SIGNOR-261278
|
P09619
|
P00519
| 2
|
phosphorylation
|
up-regulates activity
| 0.527
|
Here, we show that PDGFR-beta-phosphorylation of Abl kinases has functional consequences as PDGFR-beta phosphorylates Abl kinases on Y245 and Y412, sites known to be required for activation of Abl kinases.
|
SIGNOR-278319
|
P49841
|
P46821
| 1
|
phosphorylation
|
down-regulates activity
| 0.527
|
GSK-3beta phosphorylates MAP1B and the adenomatous polyposis coil gene product (APC; Grimes and Jope 2001; Frame and Cohen 2001). The phosphorylation of MAP1B by GSK-3beta suppresses detyrosination of microtubules and decreases the numbers of stable microtubules
|
SIGNOR-264843
|
P54829
|
P06241
| 1
|
dephosphorylation
|
down-regulates
| 0.527
|
Wild-type step(61) dephosphorylates fyn at tyr(420) but not at tyr(531). These results suggest that step regulates the activity of fyn by specifically dephosphorylating the regulatory tyr(420) and may be one mechanism by which fyn activity is decreased within psds.
|
SIGNOR-86791
|
Q6UWE0
|
Q99816
| 1
|
monoubiquitination
|
down-regulates quantity
| 0.527
|
Tal increases ubiquitylation of Tsg101 and affects its solubility in a RING- and PTAP-dependent manner. Tal-mediated ubiquitylation of Tsg101 inactivates this sorting function and concomitantly translocates Tsg101 from relatively insoluble membrane subdomains. Presumably, the coordinated action of Tal and a deubiquitylation enzyme (DUB) enables recycling of Tsg101 and reloading of cargo.
|
SIGNOR-271509
|
Q16649
|
P08700
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.527
|
NF-IL3A transactivates the IL-3 promoter through the A region sequences.
|
SIGNOR-266222
|
P28482
|
Q07820
| 1
|
phosphorylation
|
up-regulates
| 0.527
|
We found that jnk phosphorylated ser-121 and thr-163 of mcl-1 in response to stimulation with h(2)o(2) and that transfection of unphosphorylatable mcl-1 resulted in an enhanced anti-apoptotic activity in response to stimulation with h(2)o(2). Jnk-dependent phosphorylation and thus inactivation of mcl-1 may be one of the mechanisms through which oxidative stress induces cellular damage.
|
SIGNOR-92593
|
O75365
|
P05556
| 1
|
dephosphorylation
|
down-regulates activity
| 0.527
|
In this study, we demonstrate that PRL-3 directly binds to integrin \u03b21 and dephosphorylates integrin \u03b21-Y783, a key residue for integrin \u03b21 function [ ].|These results indicate that PRL-3 dephosphorylates integrin \u03b21 in vitro and in vivo.
|
SIGNOR-277050
|
P08588
|
P63092
| 1
|
binding
|
up-regulates activity
| 0.527
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ‚â• -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ‚â• -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ‚â• -1.0.
|
SIGNOR-256758
|
P31749
|
P26358
| 1
|
phosphorylation
|
up-regulates
| 0.527
|
Akt1 kinase colocalizes and directly interacts with dnmt1 and phosphorylates ser143. Phosphorylated dnmt1 peaks during dna synthesis, before dnmt1 methylation. Depletion of akt1 or overexpression of dominant-negative akt1 increases methylated dnmt1, resulting in a decrease in dnmt1 abundance. In mammalian cells, phosphorylated dnmt1 is more stable than methylated dnmt1.
|
SIGNOR-170530
|
P29350
|
P12931
| 2
|
dephosphorylation
|
up-regulates activity
| 0.527
|
Several protein tyrosine phosphatases are capable of activating Src by dephosphorylating Y530 (reviewed in ref. 9). These include PTP-α, PTP-λ, SHP-1, SHP-2, and PTP1B
|
SIGNOR-248472
|
P03372
|
Q92731
| 1
|
binding
|
up-regulates
| 0.527
|
It was recently shown that er? And er? Could form a heterodimer complex both in vitro and in vivo
|
SIGNOR-64427
|
P45983
|
P37231
| 1
|
phosphorylation
|
down-regulates activity
| 0.527
|
The a/b domain of human ppargamma1 was phosphorylated in vivo, and this was abolished either by mutation of serine 84 to alanine (s84a) or coexpression of a phosphoprotein phosphatase. In vitro, this domain was phosphorylated by erk2 and jnk, and this was markedly reduced in the s84a mutant. Thus, phosphorylation of a mitogen-activated protein kinase site in the a/b region of ppargamma inhibits both ligand-independent and ligand-dependent transactivation functions.
|
SIGNOR-46518
|
P61764
|
Q9ULB1
| 1
|
binding
|
up-regulates activity
| 0.527
|
We propose that all these neurexin complexes can interact with Munc18. Both Mint1 and Mint2 could function as direct adaptors of Munc18 to neurexins, whereas Mint1 in addition could recruit Munc18 to CASK-neurexin (Fig. 5 B).
|
SIGNOR-264040
|
P55283
|
P35222
| 1
|
binding
|
up-regulates activity
| 0.527
|
At its C-terminus, cadherin interacts with β-catenin, which dynamically associates with α-catenin, a direct binding partner of filamentous actin
|
SIGNOR-265866
|
P12931
|
P52735
| 1
|
phosphorylation
|
up-regulates activity
| 0.527
|
Since we find that Vav2 is necessary for cell spreading and Src activity is necessary for Vav2 activation of Rac and lamellipodia formation, our data suggest a model of Rac activation by integrins that depends on Src phosphorylation of Vav2.|We did not detect increased Rac activation when Vav2 was cotransfected with activated Src, although Vav2 tyrosine phosphorylation was increased (data not shown), indicating that endogenous Src activity is sufficient to fully activate Vav2.
|
SIGNOR-280138
|
Q2Q1W2
|
Q6ZN17
| 1
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.527
|
In cells, TRIM71 negatively regulates Lin28B protein stability by catalyzing polyubiquitination.
|
SIGNOR-272054
|
Q14289
|
P06396
| 1
|
phosphorylation
|
down-regulates activity
| 0.527
|
Our results demonstrate that PYK2 inhibits this EGTA stable gelsolin-actin monomer association.|PYK2 phosphorylates gelsolin at tyrosine residues and regulates gelsolin bioactivity, including decreasing gelsolin binding to actin monomer and increasing gelsolin binding to phosphatidylinositol lipids.
|
SIGNOR-278325
|
Q16539
|
Q9Y6Q9
| 1
|
phosphorylation
|
up-regulates activity
| 0.526
|
P38 MAPK and JNK can phosphorylate multiple sites on SRC-3, including S505, S543, S860, and S867. Our results suggest that several kinases are important for phosphorylating SRC-3 and enhancing its interaction with DNA-dependent transcription factors and other coactivators.
|
SIGNOR-250103
|
P00519
|
P05412
| 1
|
phosphorylation
|
up-regulates activity
| 0.526
|
Active nuclear Abl efficiently phosphorylate c-Jun. After phosphorylation of c-Jun by Abl on Tyr170, both proteins interacted via the SH2 domain of Abl.
|
SIGNOR-251428
|
P08311
|
P55085
| 1
|
cleavage
|
down-regulates activity
| 0.526
|
PAR1E and PAR2E (10 microM) were incubated in the presence of the different proteases | The enzymes were used at the following concentrations: 0.5 unit/mL thrombin, 2.5 nM trypsin, 20 nM plasmin, 20 nM cathepsin G, 20 nM elastase, 20 nM proteinase 3, and 2 units/mL calpain I and II|Protease-activated receptors (PARs) mediate cell activation after proteolytic cleavage of their extracellular amino terminus.|Mass spectrometry studies of PAR2E predicted activation of PAR2 by trypsin through cleavage at the Arg36-Ser37 site, no effect of thrombin, and inactivation of the receptor by plasmin, calpain and leukocyte elastase, cathepsin G, and proteinase 3
|
SIGNOR-263585
|
P45983
|
Q07820
| 1
|
phosphorylation
|
up-regulates
| 0.526
|
We found that jnk phosphorylated ser-121 and thr-163 of mcl-1 in response to stimulation with h(2)o(2) and that transfection of unphosphorylatable mcl-1 resulted in an enhanced anti-apoptotic activity in response to stimulation with h(2)o(2). Jnk-dependent phosphorylation and thus inactivation of mcl-1 may be one of the mechanisms through which oxidative stress induces cellular damage.
|
SIGNOR-92597
|
P24941
|
P55273
| 1
|
phosphorylation
|
up-regulates
| 0.526
|
Cdk2 and pka were found to participate in p19ink4d phosphorylation process and that they would mediate serine 76 and threonine 141 modifications respectively. Nuclear translocation of p19ink4d induced by dna damage was shown to be dependent on serine 76 phosphorylation.
|
SIGNOR-197270
|
Q16539
|
P19419
| 1
|
phosphorylation
|
up-regulates
| 0.526
|
We demonstrate here that elk-1 is barely activated by a third subclass of map kinases (p38), most likely because the critical residues ser383 and ser389 are poorly phosphorylated by p38 map kinase.
|
SIGNOR-47630
|
P16591
|
P14923
| 1
|
phosphorylation
|
up-regulates activity
| 0.526
|
The tyrosine kinase Fer, which modifies beta-catenin Tyr142, lessening its association with alpha-catenin, phosphorylates plakoglobin Tyr549 and exerts the contrary effect: it raises the binding of plakoglobin to alpha-catenin. Fer stimulation, through modification of Tyr549, causes diminished binding of plakoglobin to components of desmosomes (desmoplakin) and increased interaction with adherens junction proteins (α-catenin)
|
SIGNOR-251134
|
Q13191
|
P16333
| 1
|
binding
|
up-regulates activity
| 0.526
|
Activated Cbl and Cbl-b interacted with Crk-L, Zap-70, Nck, PLC-gamma
|
SIGNOR-236054
|
Q92830
|
P84022
| 1
|
binding
|
up-regulates
| 0.526
|
Gcn5 functions like pcaf, in that it binds to tgf-beta-specific r-smads, and enhances transcriptional activity induced by tgf-beta. In addition, gcn5, but not pcaf, interacts with r-smads for bone morphogenetic protein (bmp) signalling pathways, and enhances bmp-induced transcriptional activity, suggesting that gcn5 and pcaf have distinct physiological functions in vivo.
|
SIGNOR-123318
|
P06239
|
Q05655
| 1
|
phosphorylation
|
up-regulates activity
| 0.526
|
The tyrosine phosphorylation sites of PKC delta in the H(2)O(2)-treated cells were identified as Tyr-311, Tyr-332, and Tyr-512 by mass spectrometric analysis with the use of the precursor-scan method and by immunoblot analysis with the use of phosphorylation site-specific antibodies. Tyr-311 was the predominant modification site among them. In an in vitro study, phosphorylation at this site by Lck, a non-receptor-type tyrosine kinase, enhanced the basal enzymatic activity and elevated its maximal velocity in the presence of diacylglycerol. phosphorylation at Tyr-311 between the regulatory and catalytic domains is a critical step for generation of the active PKC delta in response to H(2)O(2).
|
SIGNOR-251386
|
P12931
|
O15455
| 1
|
phosphorylation
|
up-regulates activity
| 0.526
|
Markedly, Src mediated late TLR3 Pi-Tyr759 leads to the nuclear accumulation of IRF3 and IRF7 and the increase of IFN-beta production.|Src can directly phosphorylate TLR3 Tyr759 in\nvitro and in vivo .
|
SIGNOR-279657
|
P06493
|
P62820
| 1
|
phosphorylation
|
down-regulates activity
| 0.526
|
We now present biochemical evidence for a mitosis-specific p34cdc2 phosphorylation of RablAp and Rab4p.We also show that the distribution of RablAp and Rab4p between cytosolic and membrane-bound forms is different in interphase and mitotic cells.
|
SIGNOR-261284
|
P04899
|
O95622
| 1
|
binding
|
down-regulates activity
| 0.526
|
Types V and VI adenylyl cyclase are most sensitive to inhibition by Gnai1, Gnai2, and Gnai3
|
SIGNOR-278075
|
Q9BRX9
|
Q02750
| 1
|
binding
|
up-regulates
| 0.526
|
Morg1 specifically associates with several components of the erk pathway, including mp1, raf-1, mek, and erk, and stabilizes their assembly into an oligomeric complex.
|
SIGNOR-124470
|
O96017
|
P51530
| 1
|
phosphorylation
|
up-regulates activity
| 0.526
|
We later observed that Dna2 phosphorylation by Cds1 is necessary for Dna2 association with chromatin in HU treated cells.
|
SIGNOR-279729
|
O96017
|
P54132
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.526
|
We now provide evidence that BLM undergoes K48-linked ubiquitylation and subsequent degradation during mitosis due to the E3 ligase, Fbw7α. Fbw7α carries out its function after GSK3β- and CDK2/cyclin A2-dependent phosphorylation events on Thr171 and Ser175 of BLM which lies within a well-defined phosphodegron, a sequence which is conserved in all primates.Phosphorylation on BLM Thr171 and Ser175 depends on prior phosphorylation at Thr182 by Chk1/Chk2. Thr182 phosphorylation not only controls BLM ubiquitylation and degradation during mitosis but is also a determinant for its localization on the ultrafine bridges.
|
SIGNOR-276908
|
P12931
|
P17655
| 1
|
phosphorylation
|
up-regulates activity
| 0.525
|
CAPN2 itself was a bone fide substrate of SRC that was primarily phosphorylated at Y625 by SRC and exhibited increased proteolysis activity upon phosphorylation.
|
SIGNOR-277598
|
Q00535
|
Q12879
| 1
|
phosphorylation
|
up-regulates activity
| 0.525
|
Here, we demonstrate that cyclin dependent kinase-5 (Cdk5) associates with and phosphorylates NR2A subunits at Ser-1232 in vitro and in intact cells. Moreover, we show that roscovitine, a selective Cdk5 inhibitor, blocks both long-term potentiation induction and NMDA-evoked currents in rat CA1 hippocampal neurons. These results suggest that Cdk5 plays a key role in synaptic transmission and plasticity through its up-regulation of NMDARs.
|
SIGNOR-250666
|
Q14289
|
O43150
| 1
|
phosphorylation
|
up-regulates activity
| 0.525
|
Tyrosine phosphorylation of Pap by Pyk2 or Src kinases. We have identified a new Pyk2 binding protein designated Pap. Pap is a multidomain protein composed of an N-terminal alpha-helical region with a coiled-coil motif, followed by a pleckstrin homology domain, an Arf-GAP domain, an ankyrin homology region, a proline-rich region, and a C-terminal SH3 domain. We demonstrate that Pap forms a stable complex with Pyk2 and that activation of Pyk2 leads to tyrosine phosphorylation of Pap in living cells.
|
SIGNOR-269704
|
P53778
|
P10636
| 1
|
phosphorylation
|
down-regulates activity
| 0.525
|
Phosphorylation of tau by SAPK3 and SAPK4 markedly reduced the ability of tau to promote microtubule assembly. SAPK3 (also called ERK6 and p38) and SAPK4 phosphorylate recombinant tau protein at multiple Ser/Thr-Pro sites that are hyperphosphorylated in PHF-tau, with SAPK4 and SAPK3 being the most effective.
|
SIGNOR-250087
|
Q9BRX9
|
P04049
| 1
|
binding
|
up-regulates
| 0.525
|
Morg1 specifically associates with several components of the erk pathway, including mp1, raf-1, mek, and erk, and stabilizes their assembly into an oligomeric complex.
|
SIGNOR-124476
|
P36888
|
Q06124
| 1
|
binding
|
up-regulates activity
| 0.525
|
Y599 was additionally found to interact with the protein tyrosine phosphatase SHP2 in a phosphorylation-dependent manner. As Y599F-Flt3-32D was unable to associate with and to phosphorylate SHP2 and since silencing of SHP2 in WT-Flt3-expressing cells mimicked the Y599F-Flt3 phenotype, we hypothesize that recruitment of SHP2 to pY599 contributes to FL-mediated Erk activation and proliferation.
|
SIGNOR-245057
|
Q9UKV5
|
O15503
| 1
|
ubiquitination
|
down-regulates quantity by destabilization
| 0.525
|
The ubiquitination of Insig-1 is mediated by gp78 and regulated by sterols.|gp78 mediates the degradation of Insig-1 and Insig-2.
|
SIGNOR-278567
|
Q96GX9
|
O14727
| 1
|
binding
|
down-regulates
| 0.525
|
Taken together, these results suggest that apip functions to inhibit muscle ischemic damage by binding to apaf-1 in the apaf-1/caspase-9 apoptosis pathway.
|
SIGNOR-126797
|
O15013
|
P61586
| 1
|
guanine nucleotide exchange factor
|
up-regulates activity
| 0.525
|
We therefore developed a screening-compatible live-cell imaging assay, using FRET-based biosensors for the prototype GTPases RHOA, RAC1 and CDC4215,19,20 (Extended Data Fig. 2 and Supplementary Note 1)|We found catalytic activities for 45/75 RhoGEFs and 48/63 RhoGAPs| Our data thus not only reveal extensive promiscuity among regulators, but also that the inactivating RhoGAPs are less selective than the activating RhoGEFs (p-value=0.02)(Supplementary Table 2).
|
SIGNOR-260535
|
P0DP25
|
P48454
| 1
|
binding
|
up-regulates
| 0.525
|
Calcium-bound calmodulin associates with calcineurin (cn), releasing the phosphatase from the repressive effects on an autoinhibitory domain.
|
SIGNOR-266340
|
P38435
|
Q14393
| 1
|
carboxylation
|
up-regulates activity
| 0.525
|
Thus, vitamin K acts as a cofactor for GGCX via the vitamin K cycle and exerts physiological effects through its regulation of VKDPs [29]. More than 20 VKDPs have been found. Osteocalcin promotes bone formation, and blood coagulation factors II, VII, IX, and X activate blood coagulation. Matrix Gla protein suppresses cardiovascular calcification, and brain-expressed Gas 6 promotes neural differentiation [29]. GGCX is an enzyme that converts glutamic acid (Glu) residues to Gla residues, so that the Gla-containing proteins can exert various physiological actions such as blood coagulation and bone formation.
|
SIGNOR-265923
|
Q99578
|
Q01851
| 1
|
binding
|
up-regulates activity
| 0.525
|
we describe the evidence for a functional interaction between Brn-3a and Rin and demonstrate the role of Rin in modulating the activation of the Brn-3a regulated egr-1 promoter by the N-terminal domain of Brn-3a.
|
SIGNOR-224546
|
Q9BYP7
|
P55011
| 1
|
phosphorylation
|
up-regulates activity
| 0.525
|
We have shown that with-no-lysine kinase 3 (WNK3) possesses several properties that suggest it could be the Cl−/volume-sensitive regulatory kinase that, in association with protein phosphatases, reciprocally modifies the phosphorylation/dephosphorylation states of the SLC12 proteins and thus their activities|WNK3 activates NKCC1/2 and NCC and inhibits the KCCs
|
SIGNOR-264625
|
Q13237
|
Q01970
| 1
|
phosphorylation
|
down-regulates activity
| 0.525
|
PKG can directly phosphorylate PLC-beta2 and PLC-beta3 in vitro with purified proteins and in vivo with metabolic labeling. Phosphorylation of PLC-beta leads to the inhibition of G-protein-activated PLC-beta3 activity by 50-70% in COS-7 cell transfection assays. By using phosphopeptide mapping and site-directed mutagenesis, we further identified two key phosphorylation sites for the regulation of PLC-beta3 by PKG (Ser(26) and Ser(1105)). Mutation at these two sites (S26A and S1105A) of PLC-beta3 completely blocked the phosphorylation of PLC-beta3 protein catalyzed by PKG.
|
SIGNOR-249078
|
P31751
|
Q92934
| 1
|
phosphorylation
|
down-regulates
| 0.525
|
Ser-136 is the major phosphoacceptor site for akt;akt can weakly phosphorilate ser-155.
|
SIGNOR-81114
|
Q9H6Y7
|
Q96BI1
| 1
|
polyubiquitination
|
down-regulates quantity by destabilization
| 0.525
|
Here, we present evidences indicating that RING105, a novel conserved RING-finger protein with a PA (protease-associated) domain and a PEST sequence, is a ubiquitin ligase for TSSC5 that can function in concert with the ubiquitin-conjugating enzyme UbcH6. The polyubiquitin target site on TSSC5 was mapped to a region in the 6th hydrophilic loop.
|
SIGNOR-271551
|
P14316
|
P33076
| 1
|
transcriptional regulation
|
up-regulates quantity by expression
| 0.525
|
In addition to IRF-1, IRF-2, another member of the IRF family, also activates the human CIITA type IV promoter, and IRF-2 cooperates with IRF-1 to activate the promoter in transient transfection assays.
|
SIGNOR-271681
|
P78527
|
P09874
| 1
|
phosphorylation
|
down-regulates activity
| 0.525
|
Therefore, through its interaction with Ku70/80 in the presence of dsDNA , DNA-PK phosphorylated PARP-1 at its catalytic CTD.
|
SIGNOR-280093
|
P31749
|
P23769
| 1
|
phosphorylation
|
down-regulates
| 0.524
|
We show that insulin induces gata2 phosphorylation on serine 401 in a pi-3k/akt-dependent manner. Insulin-dependent phosphorylation of serine 401 impairs gata2 translocation to the nucleus and its dna binding activity
|
SIGNOR-135614
|
P12931
|
P04637
| 1
|
phosphorylation
|
down-regulates quantity by destabilization
| 0.524
|
We recently found that ISGylation of the p53 tumor suppressor is an important novel mechanism to control its stability. Here we identified that Isg15-dependent regulation of p53 can be enhanced by different oncogenes. We further show that the Src-mediated phosphorylation of p53 on Tyr126 and Tyr220 has a positive effect on p53 ISGylation by enhancing Herc5 binding.
|
SIGNOR-276668
|
Q14974
|
P84022
| 1
|
relocalization
|
up-regulates
| 0.524
|
Here we show that the isolated smad 3 mh1 domain displays significant specific binding to importin beta. we propose that activation of all of the pathway-specific smad proteins (smads 1, 2, 3, 5, 8, and 9) exposes the conserved nls motif, which then binds directly to importin beta and triggers nuclear translocation.
|
SIGNOR-78191
|
Q03113
|
Q12802
| 1
|
binding
|
up-regulates activity
| 0.524
|
These data suggest that G12 is an upstream activator of AKAP-Lbc in the Rho signaling pathway.
|
SIGNOR-278882
|
Q96CW1
|
P00533
| 1
|
relocalization
|
down-regulates
| 0.524
|
The removal of the epidermal growth factor receptor (egfr) from the cell surface by endocytosis is triggered by receptor activation, but many facets of egfr trafficking remain unresolvedthe ap-2 complex is involved in the internalization of activated egfr.
|
SIGNOR-185124
|
Q99836
|
Q9H2U1
| 1
|
binding
|
up-regulates activity
| 0.524
|
We further showed that both DHX9 and DHX36 are localized within the cytosol and are directly bound to the Toll-interleukin receptor domain of MyD88 via their helicase-associated domain 2 and DUF domains. This study demonstrates that DHX9/DHX36 represent the MyD88-dependent DNA sensors in the cytosol of pDCs and suggests a much broader role for DHX helicases in viral sensing.
|
SIGNOR-260956
|
O95747
|
P55011
| 1
|
phosphorylation
|
up-regulates
| 0.524
|
The secretory na-k-cl cotransporter nkcc1 is activated by secretagogues through a phosphorylation-dependent mechanism. three phosphoacceptor sites were identified in the n-terminal domain of the protein (at thr184, thr189, and thr202) none of these residues occurs in the context of strong consensus sites for known ser/thr kinases.
|
SIGNOR-90927
|
Q9Y2N7
|
Q16665
| 1
|
transcriptional regulation
|
down-regulates quantity by repression
| 0.524
|
None of the long HIF-3α variants was capable of efficient induction of an HRE reporter in overexpression experiments, but instead inhibited the transcriptional activation of the reporter by HIF-1 and HIF-2.
|
SIGNOR-261615
|
P29275
|
P38405
| 1
|
binding
|
up-regulates activity
| 0.524
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-256910
|
P27348
|
P46527
| 1
|
binding
|
down-regulates
| 0.524
|
14-3-3_, 14-3-3_, and 14-3-3_ (but not 14-3-3_ and 14-3-3_) could form a complex with p27kip1 / we discovered that akt-mediated p27kip1phosphorylation directly induces p27kip1binding to 14-3-3 and cytoplasmic localization through phosphorylating the newly identified thr198residue.
|
SIGNOR-88300
|
P26927
|
Q13043
| 1
|
phosphorylation
|
up-regulates
| 0.524
|
We directly show that okadaic acid induces phosphorylation in the activation loop of mst, and, once phosphorylated, mst is rapidly translocated to the nucleus. when thr183 in mst1 was mutated to ala, no band could be detected by oa treatment,2 indicating that thr183 was the site of phosphorylation.
|
SIGNOR-114289
|
P53350
|
Q9H1A4
| 1
|
phosphorylation
|
up-regulates
| 0.524
|
Our analysis revealed an unexpected and unprecedented complexity of mitotic phosphorylation sites and suggests that other kinases than cdk1 and plk1 also contribute to apc phosphorylation.
|
SIGNOR-119881
|
P30872
|
P63096
| 1
|
binding
|
up-regulates activity
| 0.524
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-256679
|
P56524
|
Q13950
| 1
|
deacetylation
|
down-regulates activity
| 0.524
|
HDAC4 and HDAC5 deacetylate Runx2, allowing the protein to undergo Smurf-mediated degradation
|
SIGNOR-227547
|
Q03112
|
Q01196
| 1
|
binding
|
down-regulates activity
| 0.524
|
The results that we present here support this model and show that EVI1 interacts with and inhibits RUNX1. As for GATA1, EVI1 seems to repress RUNX1 function by interacting specifically with its DNA-binding domain Runt, leading to destabilization and dissolution of the DNA-RUNX1 complex.
|
SIGNOR-255716
|
Q14289
|
Q05397
| 1
|
phosphorylation
|
up-regulates
| 0.524
|
Activated rock phosphorylates fak on ser732, which is essential for phosphorylation of tyr407 and for cell migration. We further show that pyk2 is activated by vegf-induced clustering of integrin v 3 and is responsible for the phosphorylation of tyr407.
|
SIGNOR-147070
|
Q9UK22
|
P56817
| 1
|
binding
|
down-regulates quantity by destabilization
| 0.523
|
SCFFbx2-E3-ligase-mediated degradation of BACE1 attenuates Alzheimer’s disease amyloidosis and improves synaptic function. We report that the SCF(Fbx2) -E3 ligase is involved in the binding and ubiquitination of BACE1 via its Trp 280 residue of F-box-associated domain. we found that overexpression of Fbx2 in the primary cortical and hippocampal neurons derived from Tg2576 transgenic mice significantly promoted BACE1 degradation and reduced β-amyloid production.
|
SIGNOR-271904
|
P23443
|
P08151
| 1
|
phosphorylation
|
up-regulates
| 0.523
|
In this study, we found that an activated mtor/s6k1 pathway promotes gli1 transcriptional activity and oncogenic function through s6k1-mediated gli1 phosphorylation at ser84, which releases gli1 from its endogenous inhibitor, sufu.
|
SIGNOR-196756
|
P21333
|
P45985
| 1
|
binding
|
up-regulates activity
| 0.523
|
We used Filamin-A-deficient cells to show that Filamin A enhances MKK7 activation and is important for synergistic stress-induced JNK activation in vivo. Thus Filamin A is a novel member of the group of scaffold proteins whose function is to link two MAPKKs together and promote JNK activation. The present study provides evidence that Filamin A is one of the ‘binder’ molecules presumed to directly and closely connect MKK4 and MKK7 so that they can mediate this tyrosine/threonine phosphorylation. We showed that Filamin A (as well as Filamin B and C) associate with MKK7 and MKK4, but not with JNK1 itself
|
SIGNOR-260629
|
P84022
|
Q9BZS1
| 1
| null |
up-regulates
| 0.523
|
The TCR, IL-2R, and TbetaR must all be stimulated to induce Foxp3 + Tregs. Failure to engage any one of these receptors prevents the generation of Foxp3 + Tregs
|
SIGNOR-254363
|
P53350
|
Q14203
| 1
|
phosphorylation
|
up-regulates
| 0.523
|
Plk1-mediated phosphorylation of p150(glued) at ser-179 positively regulates its accumulation at the nuclear envelope during prophase.
|
SIGNOR-167281
|
P63096
|
P60953
| 1
|
binding
|
up-regulates activity
| 0.523
|
These findings indicate that both G alpha(i) and G beta gamma stimulate Rac and Cdc42 pathways with lysophosphatidic acid-induced cell spreading on fibronectin
|
SIGNOR-256531
|
P27361
|
P19793
| 1
|
phosphorylation
|
down-regulates activity
| 0.523
|
In colon cancer cells, the Ras/mitogen‐activated protein kinase (MAPK) pathway phosphorylates RXRalpha, which impairs its function as a heterodimeric partner for PPARgamma|A point‐mutated RXRalpha T82A/S260A, which mimics the unphosphorylated form of RXRalpha, can form a heterodimer with PPARgamma and thereby activate target gene expression by binding to the PPRE
|
SIGNOR-88662
|
P17252
|
Q96A00
| 1
|
phosphorylation
|
up-regulates activity
| 0.523
|
A major kinase for GPCR‐induced CPI‐17 phosphorylation is PKC which is activated by the PLCbeta‐produced signaling messenger diacylglycerol (DAG). It phosphorylates CPI‐17 at Thr38 residue that directly docks at the active site of MLCP, thereby inhibiting its activity and promoting an increase of phosphorylation of myosin and of other MLCP.
|
SIGNOR-249259
|
P30550
|
P50148
| 1
|
binding
|
up-regulates activity
| 0.523
|
Here we systematically quantified ligand-induced interactions between 148 GPCRs and all 11 unique G alpha subunit C-termini. For each receptor, we probed chimeric G alpha subunit activation via a transforming growth factor-alpha (TGF alpha) shedding response in HEK293 cells lacking endogenous Gq/11- and G12/13- signaling. | We defined positive coupling if any member of the subfamily scored LogRAi ≥ -1 and negative coupling if all of the members scored LogRAi < -1 (Figure 3A-B). ROC analysis gives AUC = 0.78 (Figure S4A) when considering high-confidence known coupling data and suggested a threshold of LogRAi ≥ -1.0 for defining true couplings. | The score associated to this interaction has a LogRAi ≥ -1.0.
|
SIGNOR-257372
|
Q16539
|
Q15717
| 1
|
phosphorylation
|
up-regulates
| 0.523
|
P38 mapk phosphorylates the mrna binding protein hur on thr118, which results in cytoplasmic accumulation of hur and its enhanced binding to the p21cip1 mrna.
|
SIGNOR-186135
|
O95835
|
Q4VCS5
| 1
|
phosphorylation
|
up-regulates quantity by stabilization
| 0.523
|
Here low serum and high LATS1 activity are found to enhance the levels of the 130-kDa isoform of angiomotin (Amot130) through phosphorylation by LATS1/2 at serine 175, which then forms a binding site for 14-3-3. Such phosphorylation, in turn, enables the ubiquitin ligase atrophin-1 interacting protein (AIP)4 to bind, ubiquitinate, and stabilize Amot130
|
SIGNOR-275843
|
Q8N6P7
|
P23458
| 1
|
binding
|
up-regulates
| 0.523
|
Each r1-type chain (il-10r1, il-20r1, il-22r1, ifn-_r1 and ifn-_r1) is associated with jak1 tyrosine kinase and mediates recruitment of a variety of signaling molecules after being phosphorylated on its intracellular domain.
|
SIGNOR-124489
|
Q9HD26
|
Q14457
| 1
|
binding
|
up-regulates
| 0.523
|
Npist binds beclin 1 by a ccd
|
SIGNOR-171896
|
P54727
|
P15927
| 1
|
binding
|
up-regulates activity
| 0.523
|
GG-NER is initiated by the GG-NER specific factor XPC-RAD23B, in some cases with the help of UV-DDB (UV-damaged DNA-binding protein). TC-NER is initiated by RNA polymerase stalled at a lesion with the help of TC-NER specific factors CSA, CSB, and XAB2. Both pathways require the core NER factors to complete the excision process|The core NER dual incision reaction has been reconstituted in vitro with purified factors using XPC-RAD23B, TFIIH, XPA, RPA, XPG, and ERCC1-XPF (Aboussekhra et al. 1995; Mu et al. 1995; Araujo et al. 2000).|The core NER dual incision reaction has been reconstituted in vitro with purified factors using XPC-RAD23B, TFIIH, XPA, RPA, XPG, and ERCC1-XPF (Aboussekhra et al. 1995; Mu et al. 1995; Araujo et al. 2000). Functional studies revealed that XPC-RAD23B is the initial damage recognition factor in this system, as the presence of XPC-RAD23B is required for assembly of the other core NER factors and progression through the NER pathway both in vitro and in vivo
|
SIGNOR-275699
|
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