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The dataset generation failed
Error code: DatasetGenerationError
Exception: ArrowInvalid
Message: Failed to parse string: '\N' as a scalar of type int64
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1871, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 643, in write_table
pa_table = table_cast(pa_table, self._schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2293, in table_cast
return cast_table_to_schema(table, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2246, in cast_table_to_schema
arrays = [
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2247, in <listcomp>
cast_array_to_feature(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 1796, in wrapper
return pa.chunked_array([func(chunk, *args, **kwargs) for chunk in array.chunks])
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 1796, in <listcomp>
return pa.chunked_array([func(chunk, *args, **kwargs) for chunk in array.chunks])
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2103, in cast_array_to_feature
return array_cast(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 1798, in wrapper
return func(array, *args, **kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 1950, in array_cast
return array.cast(pa_type)
File "pyarrow/array.pxi", line 996, in pyarrow.lib.Array.cast
File "/src/services/worker/.venv/lib/python3.9/site-packages/pyarrow/compute.py", line 404, in cast
return call_function("cast", [arr], options, memory_pool)
File "pyarrow/_compute.pyx", line 590, in pyarrow._compute.call_function
File "pyarrow/_compute.pyx", line 385, in pyarrow._compute.Function.call
File "pyarrow/error.pxi", line 154, in pyarrow.lib.pyarrow_internal_check_status
File "pyarrow/error.pxi", line 91, in pyarrow.lib.check_status
pyarrow.lib.ArrowInvalid: Failed to parse string: '\N' as a scalar of type int64
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1433, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1050, in convert_to_parquet
builder.download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 925, in download_and_prepare
self._download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1001, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1742, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1898, in _prepare_split_single
raise DatasetGenerationError("An error occurred while generating the dataset") from e
datasets.exceptions.DatasetGenerationError: An error occurred while generating the datasetNeed help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
epi_week
int64 | state
string | loc
string | loc_type
string | disease
string | cases
int64 | incidence_per_100000
float64 |
|---|---|---|---|---|---|---|
196,601
|
MN
|
MINNESOTA
|
STATE
|
HEPATITIS A
| 3
| 0.08
|
196,601
|
CO
|
COLORADO
|
STATE
|
HEPATITIS A
| 1
| 0.05
|
196,601
|
AZ
|
ARIZONA
|
STATE
|
HEPATITIS A
| 6
| 0.37
|
196,601
|
MT
|
MONTANA
|
STATE
|
HEPATITIS A
| 2
| 0.28
|
196,601
|
LA
|
LOUISIANA
|
STATE
|
HEPATITIS A
| 1
| 0.03
|
196,601
|
WA
|
WASHINGTON
|
STATE
|
HEPATITIS A
| 5
| 0.16
|
196,601
|
CA
|
CALIFORNIA
|
STATE
|
HEPATITIS A
| 89
| 0.47
|
196,601
|
MO
|
MISSOURI
|
STATE
|
HEPATITIS A
| 5
| 0.11
|
196,601
|
AL
|
ALABAMA
|
STATE
|
HEPATITIS A
| 5
| 0.14
|
196,601
|
NC
|
NORTH CAROLINA
|
STATE
|
HEPATITIS A
| 8
| 0.16
|
196,601
|
MD
|
MARYLAND
|
STATE
|
HEPATITIS A
| 9
| 0.24
|
196,601
|
GA
|
GEORGIA
|
STATE
|
HEPATITIS A
| 4
| 0.09
|
196,601
|
MS
|
MISSISSIPPI
|
STATE
|
HEPATITIS A
| 1
| 0.04
|
196,601
|
HI
|
HAWAII
|
STATE
|
HEPATITIS A
| 3
| 0.42
|
196,601
|
WV
|
WEST VIRGINIA
|
STATE
|
HEPATITIS A
| 1
| 0.06
|
196,601
|
NJ
|
NEW JERSEY
|
STATE
|
HEPATITIS A
| 21
| 0.31
|
196,601
|
NM
|
NEW MEXICO
|
STATE
|
HEPATITIS A
| 13
| 1.29
|
196,601
|
ID
|
IDAHO
|
STATE
|
HEPATITIS A
| 2
| 0.29
|
196,601
|
KS
|
KANSAS
|
STATE
|
HEPATITIS A
| 6
| 0.27
|
196,601
|
RI
|
RHODE ISLAND
|
STATE
|
HEPATITIS A
| 6
| 0.67
|
196,601
|
KY
|
KENTUCKY
|
STATE
|
HEPATITIS A
| 26
| 0.83
|
196,601
|
FL
|
FLORIDA
|
STATE
|
HEPATITIS A
| 7
| 0.11
|
196,601
|
AR
|
ARKANSAS
|
STATE
|
HEPATITIS A
| 11
| 0.58
|
196,601
|
IA
|
IOWA
|
STATE
|
HEPATITIS A
| 12
| 0.43
|
196,601
|
IL
|
ILLINOIS
|
STATE
|
HEPATITIS A
| 6
| 0.06
|
196,601
|
TX
|
TEXAS
|
STATE
|
HEPATITIS A
| 62
| 0.59
|
196,601
|
VA
|
VIRGINIA
|
STATE
|
HEPATITIS A
| 11
| 0.25
|
196,601
|
MI
|
MICHIGAN
|
STATE
|
HEPATITIS A
| 84
| 0.99
|
196,601
|
SC
|
SOUTH CAROLINA
|
STATE
|
HEPATITIS A
| 4
| 0.16
|
196,601
|
DE
|
DELAWARE
|
STATE
|
HEPATITIS A
| 3
| 0.58
|
196,601
|
WI
|
WISCONSIN
|
STATE
|
HEPATITIS A
| 15
| 0.35
|
196,601
|
NV
|
NEVADA
|
STATE
|
HEPATITIS A
| 3
| 0.67
|
196,601
|
ND
|
NORTH DAKOTA
|
STATE
|
HEPATITIS A
| 1
| 0.15
|
196,601
|
OR
|
OREGON
|
STATE
|
HEPATITIS A
| 14
| 0.71
|
196,601
|
CT
|
CONNECTICUT
|
STATE
|
HEPATITIS A
| 9
| 0.31
|
196,601
|
TN
|
TENNESSEE
|
STATE
|
HEPATITIS A
| 93
| 2.43
|
196,601
|
OH
|
OHIO
|
STATE
|
HEPATITIS A
| 40
| 0.39
|
196,601
|
UT
|
UTAH
|
STATE
|
HEPATITIS A
| 1
| 0.1
|
196,601
|
WY
|
WYOMING
|
STATE
|
HEPATITIS A
| 1
| 0.31
|
196,601
|
IN
|
INDIANA
|
STATE
|
HEPATITIS A
| 2
| 0.04
|
196,601
|
PA
|
PENNSYLVANIA
|
STATE
|
HEPATITIS A
| 26
| 0.22
|
196,601
|
MA
|
MASSACHUSETTS
|
STATE
|
HEPATITIS A
| 10
| 0.18
|
196,601
|
NH
|
NEW HAMPSHIRE
|
STATE
|
HEPATITIS A
| 3
| 0.44
|
196,601
|
ME
|
MAINE
|
STATE
|
HEPATITIS A
| 6
| 0.6
|
196,602
|
MI
|
MICHIGAN
|
STATE
|
HEPATITIS A
| 47
| 0.55
|
196,602
|
OR
|
OREGON
|
STATE
|
HEPATITIS A
| 19
| 0.96
|
196,602
|
AZ
|
ARIZONA
|
STATE
|
HEPATITIS A
| 25
| 1.55
|
196,602
|
TN
|
TENNESSEE
|
STATE
|
HEPATITIS A
| 32
| 0.84
|
196,602
|
IL
|
ILLINOIS
|
STATE
|
HEPATITIS A
| 28
| 0.26
|
196,602
|
NM
|
NEW MEXICO
|
STATE
|
HEPATITIS A
| 15
| 1.49
|
196,602
|
AL
|
ALABAMA
|
STATE
|
HEPATITIS A
| 3
| 0.09
|
196,602
|
IA
|
IOWA
|
STATE
|
HEPATITIS A
| 5
| 0.18
|
196,602
|
UT
|
UTAH
|
STATE
|
HEPATITIS A
| 4
| 0.4
|
196,602
|
SC
|
SOUTH CAROLINA
|
STATE
|
HEPATITIS A
| 2
| 0.08
|
196,602
|
DE
|
DELAWARE
|
STATE
|
HEPATITIS A
| 3
| 0.58
|
196,602
|
MS
|
MISSISSIPPI
|
STATE
|
HEPATITIS A
| 9
| 0.4
|
196,602
|
IN
|
INDIANA
|
STATE
|
HEPATITIS A
| 8
| 0.16
|
196,602
|
FL
|
FLORIDA
|
STATE
|
HEPATITIS A
| 11
| 0.18
|
196,602
|
AK
|
ALASKA
|
STATE
|
HEPATITIS A
| 6
| 2.21
|
196,602
|
HI
|
HAWAII
|
STATE
|
HEPATITIS A
| 1
| 0.14
|
196,602
|
WI
|
WISCONSIN
|
STATE
|
HEPATITIS A
| 9
| 0.21
|
196,602
|
CT
|
CONNECTICUT
|
STATE
|
HEPATITIS A
| 8
| 0.28
|
196,602
|
MA
|
MASSACHUSETTS
|
STATE
|
HEPATITIS A
| 10
| 0.18
|
196,602
|
NH
|
NEW HAMPSHIRE
|
STATE
|
HEPATITIS A
| 1
| 0.15
|
196,602
|
CA
|
CALIFORNIA
|
STATE
|
HEPATITIS A
| 122
| 0.65
|
196,602
|
PA
|
PENNSYLVANIA
|
STATE
|
HEPATITIS A
| 38
| 0.33
|
196,602
|
WA
|
WASHINGTON
|
STATE
|
HEPATITIS A
| 9
| 0.29
|
196,602
|
VA
|
VIRGINIA
|
STATE
|
HEPATITIS A
| 12
| 0.27
|
196,602
|
TX
|
TEXAS
|
STATE
|
HEPATITIS A
| 40
| 0.38
|
196,602
|
MD
|
MARYLAND
|
STATE
|
HEPATITIS A
| 10
| 0.27
|
196,602
|
NC
|
NORTH CAROLINA
|
STATE
|
HEPATITIS A
| 14
| 0.29
|
196,602
|
LA
|
LOUISIANA
|
STATE
|
HEPATITIS A
| 8
| 0.23
|
196,602
|
MN
|
MINNESOTA
|
STATE
|
HEPATITIS A
| 3
| 0.08
|
196,602
|
MO
|
MISSOURI
|
STATE
|
HEPATITIS A
| 5
| 0.11
|
196,602
|
KS
|
KANSAS
|
STATE
|
HEPATITIS A
| 4
| 0.18
|
196,602
|
WV
|
WEST VIRGINIA
|
STATE
|
HEPATITIS A
| 4
| 0.23
|
196,602
|
NY
|
NEW YORK
|
STATE
|
HEPATITIS A
| 74
| 0.41
|
196,602
|
CO
|
COLORADO
|
STATE
|
HEPATITIS A
| 3
| 0.15
|
196,602
|
ND
|
NORTH DAKOTA
|
STATE
|
HEPATITIS A
| 1
| 0.15
|
196,602
|
OH
|
OHIO
|
STATE
|
HEPATITIS A
| 25
| 0.24
|
196,602
|
ME
|
MAINE
|
STATE
|
HEPATITIS A
| 17
| 1.7
|
196,602
|
KY
|
KENTUCKY
|
STATE
|
HEPATITIS A
| 23
| 0.73
|
196,602
|
NJ
|
NEW JERSEY
|
STATE
|
HEPATITIS A
| 25
| 0.36
|
196,602
|
AR
|
ARKANSAS
|
STATE
|
HEPATITIS A
| 6
| 0.32
|
196,602
|
ID
|
IDAHO
|
STATE
|
HEPATITIS A
| 2
| 0.29
|
196,602
|
NV
|
NEVADA
|
STATE
|
HEPATITIS A
| 4
| 0.9
|
196,603
|
DE
|
DELAWARE
|
STATE
|
HEPATITIS A
| 2
| 0.39
|
196,603
|
NC
|
NORTH CAROLINA
|
STATE
|
HEPATITIS A
| 13
| 0.27
|
196,603
|
FL
|
FLORIDA
|
STATE
|
HEPATITIS A
| 18
| 0.29
|
196,603
|
WI
|
WISCONSIN
|
STATE
|
HEPATITIS A
| 10
| 0.23
|
196,603
|
MD
|
MARYLAND
|
STATE
|
HEPATITIS A
| 6
| 0.16
|
196,603
|
CT
|
CONNECTICUT
|
STATE
|
HEPATITIS A
| 5
| 0.17
|
196,603
|
VA
|
VIRGINIA
|
STATE
|
HEPATITIS A
| 14
| 0.31
|
196,603
|
KY
|
KENTUCKY
|
STATE
|
HEPATITIS A
| 17
| 0.54
|
196,603
|
NJ
|
NEW JERSEY
|
STATE
|
HEPATITIS A
| 10
| 0.15
|
196,603
|
AZ
|
ARIZONA
|
STATE
|
HEPATITIS A
| 9
| 0.56
|
196,603
|
HI
|
HAWAII
|
STATE
|
HEPATITIS A
| 2
| 0.28
|
196,603
|
IN
|
INDIANA
|
STATE
|
HEPATITIS A
| 10
| 0.2
|
196,603
|
ME
|
MAINE
|
STATE
|
HEPATITIS A
| 14
| 1.4
|
196,603
|
TN
|
TENNESSEE
|
STATE
|
HEPATITIS A
| 39
| 1.02
|
End of preview.
Project Tycho ® Level 1 Data
Description
US weekly Nationally Notifiable Disease Surveillance Data from 1888 to 2013. These data include tables of disease counts reported by US states and cities to the Federal Health Authorities every week since 1888. These tables have been published in various journals over time and are available in various online repositories but are now also available in digital, computer-readable format.
Dataset Details
- Publisher: U.S. Department of Health & Human Services
- Temporal Coverage: 1888-01-01T00:00:00-05:00/2013-08-16T00:00:00-04:00
- Last Modified: 2024-11-18
- Contact: Project Tycho (Tycho@phdl.pitt.edu)
Source
Original data can be found at: https://www.Tycho.Pitt.edu
Usage
You can load this dataset using:
from datasets import load_dataset
dataset = load_dataset('HHS-Official/project-tycho-level-1-data')
License
This dataset is licensed under https://opendatacommons.org/licenses/odbl/1.0/
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