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virus_dna_dedup_minihash_0.9_kmer_7

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train · 10.9k rows

sequence_x stringlengths 5k 45.5k	similarity_filter float64 0.9 0.9	id stringlengths 6 9	sequence_y stringlengths 5k 45.5k	name stringlengths 6 9	description stringlengths 54 448	features int64 0 0	seq_length int64 5k 45.5k	missing_seq_count int64 0 285	missingness float64 0 0.01	seq_filled stringlengths 5k 45.5k	__index_level_0__ int64 0 10.9k	spaced_sequence stringlengths 10k 91k
"GATGATGTATAATAACCTCAAAAACTAACGCAGTCATAACCGGCCATAACCGCACGGTGTCACTCGGGTACAAATTATGAATTCGATCTTTGGACTTTT(...TRUNCATED)	0.9	A93469	"GATGATGTATAATAACCTCAAAAACTAACGCAGTCATAACCGGCCATAACCGCACGGTGTCACTCGGGTACAAATTATGAATTCGATCTTTGGACTTTT(...TRUNCATED)	A93469	A93469 Sequence 1 from Patent WO9740180. [Fowl aviadenovirus 1 \| 10553.3]	0	43,804	0	0	"GATGATGTATAATAACCTCAAAAACTAACGCAGTCATAACCGGCCATAACCGCACGGTGTCACTCGGGTACAAATTATGAATTCGATCTTTGGACTTTT(...TRUNCATED)	0	"G A T G A T G T A T A A T A A C C T C A A A A A C T A A C G C A G T C A T A A C C G G C C A T A A C(...TRUNCATED)
"CATCATCAATAATATACCGCACACTTTTATTGCCCCTTTTGTGGCGTGGTGATTGGCGGAGAGGGTTGGGGGCGGCGGGCGGTGATTGGTGGAGAGGGG(...TRUNCATED)	0.9	AB026117	"CATCATCAATAATATACCGCACACTTTTATTGCCCCTTTTGTGGCGTGGTGATTGGCGGAGAGGGTTGGGGGCGGCGGGCGGTGATTGGTGGAGAGGGG(...TRUNCATED)	AB026117	AB026117 Porcine adenovirus 3 DNA, complete genome. [Porcine adenovirus 3 \| 35265.3]	0	34,094	0	0	"CATCATCAATAATATACCGCACACTTTTATTGCCCCTTTTGTGGCGTGGTGATTGGCGGAGAGGGTTGGGGGCGGCGGGCGGTGATTGGTGGAGAGGGG(...TRUNCATED)	1	"C A T C A T C A A T A A T A T A C C G C A C A C T T T T A T T G C C C C T T T T G T G G C G T G G T(...TRUNCATED)
"GGCGGGAATCACGTCACCCTTGGCAGCTGTCCTTTGCCCTCGTCATGAGTAAAGAGATTCCCACGCCTTACATGTGGAGCTATCAGCCCCAAATGGGGT(...TRUNCATED)	0.9	AB073632	"GGCGGGAATCACGTCACCCTTGGCAGCTGTCCTTTGCCCTCGTCATGAGTAAAGAGATTCCCACGCCTTACATGTGGAGCTATCAGCCCCAAATGGGGT(...TRUNCATED)	AB073632	"AB073632 Human adenovirus type 16 genes for putative pVIII protein, E3 region protein, fiber prot(...TRUNCATED)	0	5,088	0	0	"GGCGGGAATCACGTCACCCTTGGCAGCTGTCCTTTGCCCTCGTCATGAGTAAAGAGATTCCCACGCCTTACATGTGGAGCTATCAGCCCCAAATGGGGT(...TRUNCATED)	2	"G G C G G G A A T C A C G T C A C C C T T G G C A G C T G T C C T T T G C C C T C G T C A T G A G T(...TRUNCATED)
"ATGACTAACTCAGGTGTCCAGCTGGCCGGCGGCGCTTCCCGGTGCCCGCTCCGCCCACAATCGGGTATAAAAACCCTGGTGATCCGAGGCAGAGGCACA(...TRUNCATED)	0.9	AB097769	"ATGACTAACTCAGGTGTCCAGCTGGCCGGCGGCGCTTCCCGGTGCCCGCTCCGCCCACAATCGGGTATAAAAACCCTGGTGATCCGAGGCAGAGGCACA(...TRUNCATED)	AB097769	"AB097769 Human adenovirus type 8E pVIII, A1, A2, A3, A4, A5, B1, B2, B3, fiber genes, partial and(...TRUNCATED)	0	5,646	0	0	"ATGACTAACTCAGGTGTCCAGCTGGCCGGCGGCGCTTCCCGGTGCCCGCTCCGCCCACAATCGGGTATAAAAACCCTGGTGATCCGAGGCAGAGGCACA(...TRUNCATED)	3	"A T G A C T A A C T C A G G T G T C C A G C T G G C C G G C G G C G C T T C C C G G T G C C C G C T(...TRUNCATED)
"CGGGGGCTCTCCCTGGACTGAACTCAACCCGCATGAAACTGGCGCAGAGTGACCCGGGCCTGTCAGGGATGTCACAGGTTCAACGGGTATCCGTGACCA(...TRUNCATED)	0.9	AB102672	"CGGGGGCTCTCCCTGGACTGAACTCAACCCGCATGAAACTGGCGCAGAGTGACCCGGGCCTGTCAGGGATGTCACAGGTTCAACGGGTATCCGTGACCA(...TRUNCATED)	AB102672	"AB102672 Human adenovirus type 8 genes for pVIII, E3A1 12.1k, E3A1 20.5k, E3A1 gp17.6k, E3A2 47.7(...TRUNCATED)	0	5,348	0	0	"CGGGGGCTCTCCCTGGACTGAACTCAACCCGCATGAAACTGGCGCAGAGTGACCCGGGCCTGTCAGGGATGTCACAGGTTCAACGGGTATCCGTGACCA(...TRUNCATED)	4	"C G G G G G C T C T C C C T G G A C T G A A C T C A A C C C G C A T G A A A C T G G C G C A G A G T(...TRUNCATED)
"CTGGCCGAAGTCCGCACGTCTAAATCAGGAGTACAGCTGGCGGGCGGCGCTTCCCGGTGTCCGCCCAGACCCGACTTAGGTATAAAAACACTGCTGATC(...TRUNCATED)	0.9	AB106356	"CTGGCCGAAGTCCGCACGTCTAAATCAGGAGTACAGCTGGCGGGCGGCGCTTCCCGGTGTCCGCCCAGACCCGACTTAGGTATAAAAACACTGCTGATC(...TRUNCATED)	AB106356	"AB106356 Human adenovirus 8 genes for pVIII, E3A1 12.1k, E3A2 16.0k, E3A3 gp19.3k, E3A4 20.3k, E3(...TRUNCATED)	0	5,934	0	0	"CTGGCCGAAGTCCGCACGTCTAAATCAGGAGTACAGCTGGCGGGCGGCGCTTCCCGGTGTCCGCCCAGACCCGACTTAGGTATAAAAACACTGCTGATC(...TRUNCATED)	5	"C T G G C C G A A G T C C G C A C G T C T A A A T C A G G A G T A C A G C T G G C G G G C G G C G C(...TRUNCATED)
"CGGCCAACCTCTTGTAGATGGTCGAGTGAAGGTGACGTAGCACGAGCGACAGGCTACCGATCATGGAGGCCCACAAAAGCCGCGATCATCGCCTGCTTG(...TRUNCATED)	0.9	AB110079	"CGGCCAACCTCTTGTAGATGGTCGAGTGAAGGTGACGTAGCACGAGCGACAGGCTACCGATCATGGAGGCCCACAAAAGCCGCGATCATCGCCTGCTTG(...TRUNCATED)	AB110079	"AB110079 Human adenovirus type 8 genes for 100k 18.6 k, pVIII 24.6, E3A1 12.2k, E3A2 21.9k, E3A3 (...TRUNCATED)	0	6,726	0	0	"CGGCCAACCTCTTGTAGATGGTCGAGTGAAGGTGACGTAGCACGAGCGACAGGCTACCGATCATGGAGGCCCACAAAAGCCGCGATCATCGCCTGCTTG(...TRUNCATED)	6	"C G G C C A A C C T C T T G T A G A T G G T C G A G T G A A G G T G A C G T A G C A C G A G C G A C(...TRUNCATED)
"CATCATCAATAATATACCCCACAAAGTAAACAAAAGTTAATATGCAAATGAGTTTTTGAATTTTAACGGTTTCGGGGCGGAGCCAACGCTGATTGGACG(...TRUNCATED)	0.9	AB562588	"CATCATCAATAATATACCCCACAAAGTAAACAAAAGTTAATATGCAAATGAGTTTTTGAATTTTAACGGTTTCGGGGCGGAGCCAACGCTGATTGGACG(...TRUNCATED)	AB562588	"AB562588 Human adenovirus D DNA, complete genome, isolate: 2307-S. [Human mastadenovirus D \| 13(...TRUNCATED)	0	35,067	0	0	"CATCATCAATAATATACCCCACAAAGTAAACAAAAGTTAATATGCAAATGAGTTTTTGAATTTTAACGGTTTCGGGGCGGAGCCAACGCTGATTGGACG(...TRUNCATED)	7	"C A T C A T C A A T A A T A T A C C C C A C A A A G T A A A C A A A A G T T A A T A T G C A A A T G(...TRUNCATED)
"TTAGCCTCGAACAGTCCACCCAGACCGTGCTCCACTCGACCCTGAAGGGCGAGGCGCGGCGGGACTATGTCCGCGACTGCGTCTTTCTCTTTCTCTGCC(...TRUNCATED)	0.9	AB630324	"TTAGCCTCGAACAGTCCACCCAGACCGTGCTCCACTCGACCCTGAAGGGCGAGGCGCGGCGGGACTATGTCCGCGACTGCGTCTTTCTCTTTCTCTGCC(...TRUNCATED)	AB630324	"AB630324 Human adenovirus 56 L4, L5 genes for pVIII protein, fiber protein, complete cds, isolate(...TRUNCATED)	0	8,871	4	0.000451	"TTAGCCTCGAACAGTCCACCCAGACCGTGCTCCACTCGACCCTGAAGGGCGAGGCGCGGCGGGACTATGTCCGCGACTGCGTCTTTCTCTTTCTCTGCC(...TRUNCATED)	8	"T T A G C C T C G A A C A G T C C A C C C A G A C C G T G C T C C A C T C G A C C C T G A A G G G C(...TRUNCATED)
"CATCATCAATAATATACGGTGCATTTTGTGCGTGATGACGTATACAGCGTACGTAAGGGAGGAGCTTGCAAGCGTGGGAAACTTGACCTTTGAACGGGC(...TRUNCATED)	0.9	AC_000001	"CATCATCAATAATATACGGTGCATTTTGTGCGTGATGACGTATACAGCGTACGTAAGGGAGGAGCTTGCAAGCGTGGGAAACTTGACCTTTGAACGGGC(...TRUNCATED)	AC_000001	AC_000001 Ovine adenovirus A, complete genome. [Ovine mastadenovirus A \| 114424.4]	0	33,034	0	0	"CATCATCAATAATATACGGTGCATTTTGTGCGTGATGACGTATACAGCGTACGTAAGGGAGGAGCTTGCAAGCGTGGGAAACTTGACCTTTGAACGGGC(...TRUNCATED)	9	"C A T C A T C A A T A A T A T A C G G T G C A T T T T G T G C G T G A T G A C G T A T A C A G C G T(...TRUNCATED)

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