Accession
stringlengths
8
11
Organism_Name
stringlengths
10
53
Submitters
stringlengths
4
2.42k
⌀
Organization
stringlengths
3
234
⌀
Org_location
stringlengths
3
24
⌀
Release_Date
stringlengths
10
10
Isolate
stringlengths
1
75
⌀
Species
stringlengths
10
53
⌀
Genus
stringlengths
7
22
⌀
Family
stringlengths
10
19
⌀
Molecule_type
stringclasses
14 values
Length
int64
5k
95.4k
Sequence_Type
stringclasses
2 values
Publications
float64
1
134
⌀
Geo_Location
stringlengths
3
88
⌀
Country
stringlengths
3
32
⌀
Host
stringlengths
3
64
⌀
Isolation_Source
stringlengths
3
31
⌀
Collection_Date
stringlengths
4
10
⌀
BioSample
stringlengths
12
14
⌀
BioProject
stringlengths
9
23
⌀
GenBank_Title
stringlengths
22
320
Sequence
stringlengths
5k
95.4k
__index_level_0__
int64
39
112k
MN160340.1
European wheat striate mosaic virus
Somera,M., Kvarnheden,A., Desbiez,C., Blystad,D.R., Soovali,P., Kundu,J.K., Gantsovski,M., Nygren,J., Lecoq,H., Verdin,E., Spetz,C., Tamisier,L., Truve,E., Massart,S.
Tallinn University of Technology, Chemistry and Biotechnology
Estonia
2019-11-02
Avinurme4a
Tenuivirus eurotritici
Tenuivirus
Phenuiviridae
ssRNA(-)
9,496
GenBank
1
Estonia
Estonia
Triticum aestivum
null
2013-07-02
null
null
European wheat striate mosaic virus isolate Avinurme4a segment RNA1, complete sequence
ACACAAAGTCCAGGGAAATAAAAACAAAAAATAAGAGATAGACTCATAAATTGACCGAATTCAGGAATGGAAGGAGACAATGACTTAGGCATTGACTGTGAAATGTATCAATATCCATTTCCAACTCTGGCAGATGGTTCCATTCCTAGTCCCTATTTGCCTGAGAGCCCTGGCTTTAAGTTTGCTCCTGATACAGAGGAAATATTCTGCAACATCATCCCATTGAAGAATATGAATCCATCCTCTCAGCTACACTTACCCATAATTGATATCTTTAGCCAGGATCCAGAGACTCTGCAGACTCACAATATATCTGTAGA...
58,441
MN160341.1
European wheat striate mosaic virus
Somera,M., Kvarnheden,A., Desbiez,C., Blystad,D.R., Soovali,P., Kundu,J.K., Gantsovski,M., Nygren,J., Lecoq,H., Verdin,E., Spetz,C., Tamisier,L., Truve,E., Massart,S.
Tallinn University of Technology, Chemistry and Biotechnology
Estonia
2019-11-02
Hedesunda-PH
Tenuivirus eurotritici
Tenuivirus
Phenuiviridae
ssRNA(-)
9,495
GenBank
1
Sweden
Sweden
Javesella pellucida
null
2016-09-06
null
null
European wheat striate mosaic virus isolate Hedesunda-PH segment RNA1, complete sequence
ACACAAAGTCCAGGGAAATAAAAACAAAAAATAAGAGATAGACTCATATATTGATCGAATTCAGGAATGGAAGGAGACAATGACTTAGGCATTAACTGTGAAATGTATCAATATCCATTTCCAACTCTGGCAGATGGTTCCATTCCTATTTCCTATTTGCCTGAGAGCCCTGGCTTTAAGTTTGCCCCTGATACAGAGGAAATATTCTGCAACATCATCCCATTGAAGAGTGTGAATCCATCCTCTCAGCTACACTTGCCCATAATTGATATCTTTAGCCAGGATCCAGAGACTCTGCAGACTCACAATATATCTGTAGA...
58,442
MN160342.1
European wheat striate mosaic virus
Somera,M., Kvarnheden,A., Desbiez,C., Blystad,D.R., Soovali,P., Kundu,J.K., Gantsovski,M., Nygren,J., Lecoq,H., Verdin,E., Spetz,C., Tamisier,L., Truve,E., Massart,S.
Tallinn University of Technology, Chemistry and Biotechnology
Estonia
2019-11-02
Hedesunda
Tenuivirus eurotritici
Tenuivirus
Phenuiviridae
ssRNA(-)
9,495
GenBank
1
Sweden
Sweden
Avena sp.
null
2016-09-06
null
null
European wheat striate mosaic virus isolate Hedesunda segment RNA1, complete sequence
ACACAAAGTCCAGGGAAATAAAAACAAAAAATAAGAGATAGACTCATATATTGATCGAATTCAGGAATGGAAGGAGACAATGACTTAGGCATTAACTGTGAAATGTATCAATATCCATTTCCAACTCTGGCAGATGGTTCCATTCCTATTTCCTATTTGCCTGAGAGCCCTGGCTTTAAGTTTGCCCCTGATACAGAGGAAATATTCTGCAACATCATCCCATTGAAGAGTGTGAATCCATCCTCTCAGCTACACTTGCCCATAATTGATATCTTTAGCCAGGATCCAGAGACTCTGCAGACTCACAATATATCTGTAGA...
58,443
MN160343.1
European wheat striate mosaic virus
Somera,M., Kvarnheden,A., Desbiez,C., Blystad,D.R., Soovali,P., Kundu,J.K., Gantsovski,M., Nygren,J., Lecoq,H., Verdin,E., Spetz,C., Tamisier,L., Truve,E., Massart,S.
Tallinn University of Technology, Chemistry and Biotechnology
Estonia
2019-11-02
Avinurme4b
Tenuivirus eurotritici
Tenuivirus
Phenuiviridae
ssRNA(-)
9,495
GenBank
1
Estonia
Estonia
Triticum aestivum
null
2013-07-02
null
null
European wheat striate mosaic virus isolate Avinurme4b segment RNA1, complete sequence
ACACAAAGTCCAGGGAAATAAAAACAAAAAATAAGAGATAGACTCATAAATTGACCGAATTCAGGAATGGAAGGAGACAATGACTTAGGCATTAACTGTGAAATGTATCAATATCCATTTCCAACTCTGGCAGATGGTTCCATTCCTATTCCCTATTTGCCTGAGAGCCCTGGCTTTAAGTTTGCTCCTGATACAGAGGAAATATTCTGCAACATCATCCCATTGAAGAATATGAATCCATCCTCTCAGCTACACTTGCCCATAATTGATATCTTTAGCCAGGATCCAGAGACTCTGCAGACTCACAATATATCTGTAGA...
58,444
MN160344.1
European wheat striate mosaic virus
Somera,M., Kvarnheden,A., Desbiez,C., Blystad,D.R., Soovali,P., Kundu,J.K., Gantsovski,M., Nygren,J., Lecoq,H., Verdin,E., Spetz,C., Tamisier,L., Truve,E., Massart,S.
Tallinn University of Technology, Chemistry and Biotechnology
Estonia
2019-11-02
Leirsund
Tenuivirus eurotritici
Tenuivirus
Phenuiviridae
ssRNA(-)
9,495
GenBank
1
Norway
Norway
Triticum aestivum
null
2017-07-06
null
null
European wheat striate mosaic virus isolate Leirsund segment RNA1, complete sequence
ACACAAAGTCCAGGGAAATAAAAACAAAAAATAAGAGATAGACTCATACATCTACCGAATTCAAGAATGGAAGGAGACAATGACTTAGGCATTAACTGTGAAATGTATCAATATCCATTTCCAACTCTGGCAGATGGTTCTATTCCTGTTCCCTATTTGCCTGAAAGCCCTGGCTTTAAGTTTGCTCCTGATACAGAGGAAATTTTCTGCAACATTATCCCATTGAAGAATATGAACCCATCCTCTCAGCCACATCTGCCCATAATTGATGTCTTTAGCCAGGACCCAGAGATTCTGCAAACTCACAATATATCTATAGA...
58,445
NC_039212.1
Fathead minnow picornavirus
Phelps,N.B., Mor,S.K., Armien,A.G., Batts,W., Goodwin,A.E., Hopper,L., McCann,R., Ng,T.F., Puzach,C., Waltzek,T.B., Delwart,E., Winton,J., Goyal,S.M., Phelps,N.B.D.
National Center for Biotechnology Information, NIH
USA
2018-08-24
FHMPV-1
Limnipivirus C
Limnipivirus
Picornaviridae
ssRNA(+)
7,746
RefSeq
1
USA
USA
Pimephales promelas
null
2011
null
PRJNA485481
Fathead minnow picornavirus isolate FHMPV-1, complete genome
GTTTCTGAGCACTGGTAAGAGCTTAGACAAACGTTTTTAAAATTTATTTTCTCTGCAACTTTTGTTTGTGTTTATTTTTATTTGTTAATTTTGCGCCTAAGCATTTGTTGCGAAGTATTTGATTCATTAGTAATATTACTTATTGTTTATTTAGATGGTATTCAAAGTGGTGGGAGTATCGAACCCAAGCGTCGTATGCTATCTCCTTGAACAATTTTTAATCATTGCGAAGTGATCATTGAAAAGGATAGGTGTTTAAGAACTCAAAGAGTGTTAATAATGTTGGGTGACAGGTGTCCCCATAGAATTTATTAACATGA...
4,228
KF874490.1
Fathead minnow picornavirus
Phelps,N.B., Mor,S.K., Armien,A.G., Batts,W., Goodwin,A.E., Hopper,L., McCann,R., Ng,T.F., Puzach,C., Waltzek,T.B., Delwart,E., Winton,J., Goyal,S.M., Phelps,N.B.D., Ng,T.F.F.
Blood System Research Institute, Molecular Virology
USA
2014-03-10
20
Limnipivirus C
Limnipivirus
Picornaviridae
ssRNA(+)
7,772
GenBank
1
USA
USA
Pimephales promelas
null
2010-05-01
null
null
Fathead minnow picornavirus isolate 20, complete genome
GTTTCTGAGCACTGGTAAGAGCTTAGACAAACGTTTTTAAAATTTATTTTCTCTGCAACTTTTGTTCGTGTTTATTTTTATTTGTTAATTTTGTGCCTAAACATTTGTTGCGAAGTATTTGATTCATTAGCAATATTTATTATTGTTTATTTAGATGGCATTCAAAGTGGTGGGAATATCGAACCCAAGCGTCGTATGTTATCTTCTTGAACAATTTTGAATTTTTGCGACATGATCATTGAAAAGAATAGGTGTTTAAGAACTCAAGGAATGTTAACAATGGTGGGTGACAGGTGTCCCCATATAATTTGTTAACATGA...
91,444
KF183915.1
Fathead minnow picornavirus
Phelps,N.B., Mor,S.K., Armien,A.G., Batts,W., Goodwin,A.E., Hopper,L., McCann,R., Ng,T.F., Puzach,C., Waltzek,T.B., Delwart,E., Winton,J., Goyal,S.M., Phelps,N.B.D.
University of Minnesota, Veterinary Population Medicine
USA
2014-02-27
FHMPV-1
Limnipivirus C
Limnipivirus
Picornaviridae
ssRNA(+)
7,746
GenBank
1
USA
USA
Pimephales promelas
null
2011
null
null
Fathead minnow picornavirus isolate FHMPV-1, complete genome
GTTTCTGAGCACTGGTAAGAGCTTAGACAAACGTTTTTAAAATTTATTTTCTCTGCAACTTTTGTTTGTGTTTATTTTTATTTGTTAATTTTGCGCCTAAGCATTTGTTGCGAAGTATTTGATTCATTAGTAATATTACTTATTGTTTATTTAGATGGTATTCAAAGTGGTGGGAGTATCGAACCCAAGCGTCGTATGCTATCTCCTTGAACAATTTTTAATCATTGCGAAGTGATCATTGAAAAGGATAGGTGTTTAAGAACTCAAAGAGTGTTAATAATGTTGGGTGACAGGTGTCCCCATAGAATTTATTAACATGA...
91,585
KF183916.1
Fathead minnow picornavirus
Phelps,N.B., Mor,S.K., Armien,A.G., Batts,W., Goodwin,A.E., Hopper,L., McCann,R., Ng,T.F., Puzach,C., Waltzek,T.B., Delwart,E., Winton,J., Goyal,S.M., Phelps,N.B.D.
University of Minnesota, Veterinary Population Medicine
USA
2014-02-27
FHMPV-2
Limnipivirus C
Limnipivirus
Picornaviridae
ssRNA(+)
7,746
GenBank
1
USA
USA
Pimephales promelas
kidney, spleen
2011
null
null
Fathead minnow picornavirus isolate FHMPV-2, complete genome
GTTTCTGAGCACTGGTAAGAGCTTAGACAAACGTTTTTAAAATTTATTTTCTCTGCAACTTTTGTTTGTGTTTATTTTTATTTGTTAATTTTGCGCCTAAGCATTTGTTGCGAAGTATTTGATTCATTAGTAATATTGACTATTGTTTATTTAGATGGTATTCAAAGTGGTGGGAGTATCGAACCCAAGCGTCGTATGCTATCTCCTTGAACAATTTTTAATTATTGCGACCTGATCATTGAAAAGGATAAGTGTTTAAGAACTCAAGGAGTGTTAATAATGTTGGGTGACAGGTGTCCCCATAGAATTTGTTAACATGA...
91,586
KC465953.1
Fathead minnow picornavirus
Phelps,N.B., Mor,S.K., Armien,A.G., Batts,W., Goodwin,A.E., Hopper,L., McCann,R., Ng,T.F., Puzach,C., Waltzek,T.B., Delwart,E., Winton,J., Goyal,S.M., Batts,W.N., Winton,J.R.
Western Fisheries Research Center, Virology
USA
2014-02-01
null
Limnipivirus C
Limnipivirus
Picornaviridae
ssRNA(+)
7,934
GenBank
1
USA
USA
Pimephales promelas
null
2009-09-01
null
null
Fathead minnow picornavirus strain 09-283, complete genome
TTGAAAGAGAGTCCATACGGGGAACTGCGGTTCTCCTATTGGATTCTGCTTTCACAGTTTCTGAGCACTGGTAAGAGCTTAGACAAACGTTTTTAAAATTTATTTTCTCTGCAACTTTTGTTTGTGTTTATTTTTATTTGTTAATTTTGTGCCTAAACATTTGTTGCGAAGTATTTGATTCATTAGCAATATTCATTATTGTTTATTTAGATGGCATTCAAAGTGGTGGGAGTATCGAACCCAAGCGTCGTATGTTATCTCCTTGAATAATTTTGGATTTTTTCGACATGATCATTGAAAAGGATAAGTGTTTAAGAACT...
91,809
NC_043249.1
Feldmannia irregularis virus a
Delaroque,N., Boland,W., Muller,D.G., Knippers,R., Mueller,D.G.
National Center for Biotechnology Information, NIH
USA
2019-06-28
null
Feldmannia irregularis virus a
Phaeovirus
Phycodnaviridae
dsDNA
6,094
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Feldmannia irregularis virus a strain FirrV-1 contig E, partial sequence
GACAAGGCCTTGTTGGAACACATCAGGACGAACTACTATCCTGTCCAAAGAGAATCCCGTTCATCCGCCGAAGTCGAGCGGAACATGAACAAGAAGGTGGGCAACAGGAAGGTGGCGAGAGCACGGATGCTTTCCGACATTCCGTTAATGTGCAAGTTAGCGGGAAAAATGGCCTTGTTGTTGATGAAGAACGCGGTAGTGCCGGTAATGAAGCACGTGACAGAAGCCCAGGAGAAGATGTGTTGGCAGATCCTGAAGAAGGAGGAAGATTCCATCGACGACAGGATGCGTACGAACGAAGACCACCTCTACACGCCGGA...
3,324
NC_043251.1
Feldmannia irregularis virus a
Delaroque,N., Boland,W., Muller,D.G., Knippers,R., Mueller,D.G.
National Center for Biotechnology Information, NIH
USA
2019-06-28
null
Feldmannia irregularis virus a
Phaeovirus
Phycodnaviridae
dsDNA
6,968
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Feldmannia irregularis virus a strain FirrV-1 contig H, partial sequence
CGGGGGTGTAGGTGGTGCCGTCCGTGCTGCTGTACAGACTAATCGTGTACTCTGTTTCCGGCTGGAGATTCAGGACGCGTTGGGCCAGGTCGGTAAATCCTGTCGCGACGTCTATTTCGTCGGTGGCCGTTGTTGTTTTCTTTGTGAGCTTGTAGGCGATGGCGTCCGACACGGCAGCGAAACTCACGTCTATGAAAAGGGGCTTTGGTACGAGTGTGATGCCTTCCGGCAGGTTCCCGAAAACGAATTCCCAGGCGTACGATGTGCCGTAGTTATCGGTACCCGTCAGGTCGAAATACGGCAAGTTAGATTCACTGTCG...
3,325
NC_043252.1
Feldmannia irregularis virus a
Delaroque,N., Boland,W., Muller,D.G., Knippers,R., Mueller,D.G.
National Center for Biotechnology Information, NIH
USA
2019-06-28
null
Feldmannia irregularis virus a
Phaeovirus
Phycodnaviridae
dsDNA
48,352
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Feldmannia irregularis virus a strain FirrV-1 contig B, partial sequence
CGCTGGTGCAGAACAGATGAGACCTCCGCGAGCCAGTGCAGTCTCGACAACAACACCCTACATTGTTCCCTGGAATCCATATAGCAAAGGGCATCTGACCAAGAAAGAATCCAGGTTAGAGTCACGCAAACGTGCCCGGCACTGGGCTCTGAGAAACAACCCCAAAGCTTTGCAGACAGTCGCTGCACGTCAACGTAAAGGTATACGCAGGGTGAATAAAAAAGCATCTCCAAAAGCAGATCCCAATGCTAAAACGAGCACTGGATCTAAGAAAGTTCCCGACCGTGAACATAAGATGCAGACGAGATCAATGAAGAGAG...
3,326
NC_043254.1
Feldmannia irregularis virus a
Delaroque,N., Boland,W., Muller,D.G., Knippers,R., Mueller,D.G.
National Center for Biotechnology Information, NIH
USA
2019-06-28
null
Feldmannia irregularis virus a
Phaeovirus
Phycodnaviridae
dsDNA
55,981
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Feldmannia irregularis virus a strain FirrV-1 contig A, partial sequence
ACTTTTCTGTCTTATTCCCGGCATGAGGCTCCTTGGGGTCGCGTTGTGTCGTCCTCACGATGTCTTCCGGCGGCGTCGATCGACTTGCATGTTCTTGATCTTACACGTTCGCCCACCTGAGCACCTGGGTAATTGCTCTGTAGTCGAACACATTCTTCTACCTTGGCGGGATCTCACGCTCATGGCCACACTCGACGGGTTTCCAATTCTCAGATCACATCCGCCAATACATCGTCATCGACTCGAGAATTAAAAGCACAGAAGGGCCTTCTCTGCTACCATCCGTATACTCCACCGGGACCTTGGAAGTCATCGTCGCA...
3,327
NC_043255.1
Feldmannia irregularis virus a
Delaroque,N., Boland,W., Muller,D.G., Knippers,R., Mueller,D.G., Bothe,G., Thomas,P.
National Center for Biotechnology Information, NIH
USA
2019-06-28
null
Feldmannia irregularis virus a
Phaeovirus
Phycodnaviridae
dsDNA
23,975
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Feldmannia irregularis virus a strain FirrV-1 contig C, partial sequence
GGACCTCCGCGTGTAGACCACCAACCGGGCCAACCTCATTCATCTGGGCCTGAACCGGGCATCCGGGCTGCCTGGTTTACACTTCCCCGGGGTCTACAAAAATCAAGACAAACAAACCGGGCACTCTTCTTTGTGAACCGGGCAGGGCCTGAAATGCCCGGTTTGGCCTGGTACAAACACTGTTGGATGCGGTTTGATCAAAAATAAAACAGGTTCCCGCTCGAGTCCAATAATATTAGACTCGTTGTCCTAGATGCTATTACCGATACTGCGGCGCGATTTTGGTCGGGCCGATCTGGTTCGAAACGCAACATAACCGG...
3,328
NC_043256.1
Feldmannia irregularis virus a
Delaroque,N., Boland,W., Muller,D.G., Knippers,R., Mueller,D.G.
National Center for Biotechnology Information, NIH
USA
2019-06-28
null
Feldmannia irregularis virus a
Phaeovirus
Phycodnaviridae
dsDNA
16,781
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Feldmannia irregularis virus a strain FirrV-1 contig D, partial sequence
GGGCATTACTCAACTATGACAGCTCCTACTTAAGAGCCCTGGATCCTTATGATTGAAAATGTTTGTGCTGTCACACCACGGCTACAGCAACAGTACAGCGCAGACAGGACCATAAGCAACCATAGGTAGGGCTGGAAAACGTTGGTGAAGGAGTATCATCTGTTGTAGAATGCCCAAGGTCTATGGGCTCTCGACCTTTGTTGGGGTCCACTGGGAACGTCCCGGCGAGAGCTTGCACAGGTGTTAAAAAACCGGGCATTACTCAACTATGACAGCTCCTACGTTAGAGCCCGGTATCTTATGATTGAAAAGGTGCGTGT...
3,329
NC_043257.1
Feldmannia irregularis virus a
Delaroque,N., Boland,W., Muller,D.G., Knippers,R., Mueller,D.G.
National Center for Biotechnology Information, NIH
USA
2019-06-28
null
Feldmannia irregularis virus a
Phaeovirus
Phycodnaviridae
dsDNA
5,745
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Feldmannia irregularis virus a strain FirrV-1 contig F, partial sequence
GGCACCACAACGAGGTCAGAAGCGACATGACCCTTGATATCGACACTAAAAACACCAAAGAACAAGGCTTATTCTTCCAATACAGGGCCACCGTCTTCTTCACGTTTGTTCTTATTGCGCTACTCACCCTTGAATTCAAATCTCTCGGTGTCGACTACGGCACCAAACACGTCGTAACCATCGCTGTACTGTCGACGTTGGCGTACAGTTTCCTCTGGAATAACTTTCACGCACGATTGCATGGCGCCGAGGACATTTACCTACCAGGCACTCGTGGGATTCCAAACACGTATCAGGACACCGTCGTGCAGTACATGCCG...
3,330
NC_022800.1
Feline bocaparvovirus 2
Ng,T.F.F., Mesquita,J.R., Nascimento,M.S., Kondov,N.O., Wong,W., Reuter,G., Knowles,N., Vega,E.M., Esona,M.D., Den,X., Vinje,J., Delwart,E.
National Center for Biotechnology Information, NIH
USA
2013-11-14
POR1
Bocaparvovirus carnivoran4
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,479
RefSeq
null
Portugal
Portugal
Felis catus
null
2012-12-01
null
PRJNA485481
Feline bocavirus 2 isolate POR1, complete genome
CAGGTTAATCTAACGCGCGCGCGAAGCGCGCGGCGGCGAAGCCGCCGGCGTTATTTAACCGGCGCGATGACGTGTCAGTGTGGGTGTTGATTCTAGATGATAGAGGTCAACGATTAACCTGACTAGTTAATATGCAACTAACACACCTGTTAAAGATTAACTATCTGTAATCTGATTGGTCAGCATGTTAAACAGATGGGTGGAGCTATCTGTATATATACTGCTGCAACTTCCGTGTAAGCTCATTCTGCTTCCGGCGTTTGAGCTGATCAGACCTCCTGGAGACCTCACGCTTCATCCGTGCGGTGAGTCGCCAGCAA...
6,763
ON595891.1
Feline bocaparvovirus 2
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-12-06
FPV-2
Bocaparvovirus carnivoran4
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,464
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578120
PRJNA841246
MAG: Feline bocaparvovirus 2 isolate FPV-2, complete genome
GTTTGGTGTGTGTGTGGGTGTTGATTCTAGATGATAGAGGTCAACAATTAACCGGACTAGTTAATATTCACCTAACACACCTGTTAAAGAATAACTAACTGTAATCTGATTGGACAGCATAATAAACAGATGGGTGGAGCTATCTGTATATATACTGCTGCAACTTCCGTGTAAGCTCATTCTGCTTCCGGCGTTTGACCTGATCAGACCTCCTGGAGACCTCACGCTTCATCCGTGCGGTGAGTCGCCAGCAATGGCAGAAATCCCTCTCGCTAGTATCCACGATTTTATTCAATTCGCGGATCCAGCATACACCTACG...
21,523
ON595890.1
Feline bocaparvovirus 2
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-1
Bocaparvovirus carnivoran4
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,458
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578126
PRJNA841246
MAG: Feline bocaparvovirus 2 isolate FPV-1, complete genome
CGCGCGCTTCGCGCGCGCGTTAGATTAACCTGGCGCGATGACGTGTCAGTGTGGGTGTTGATTCTAGATGATAGAGGTCAACAATTAACCAGACTAGTTAATATTCAACTAACACACCTGTTAAAGAATAACTACCTGTAATCTGATTGGATAGCATGTTAAATAGATGGGTGGAGCTATCTGTATATATACTGCTGCAACTTCCGTGTAAGCTCATTCTGCTTCCGGCGTTTGACCTGATCAGACCTCCTGGAGACCTCACGCTTCATCCGTGCGGTGAGTCGCCAGCAATGGCAGAAATCCCTCTCGCTAGTATCCAC...
21,829
MT633126.1
Feline bocaparvovirus 2
Guo,X., Li,W., Wang,Y.
Anhui Agricultural University, Animal Science and Technologial College
China
2020-06-23
HFXA-6
Bocaparvovirus carnivoran4
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,320
GenBank
null
China
China
Felis catus
null
2019-08
null
null
Feline bocaparvovirus 2 isolate HFXA-6, complete genome
GATGACGTGTCAGTGTGGGTGTTGATTCTAGATGATAGAGGTCAACGATTAAACTGACTAGTTAATATTCAACTAACACACCTGTTAGAGAATAACTAACTGTAATCTGATTGGACAGCATGTTAAACAGATGGGTGGAGCTATCTGTATATATGCTGCTGCAACTTCCGTGTAAGCTCATTCTGCTTCCGGCGTTCGACCTGATCAGACCTCCTGGAGACCTCACGCTTCATCCGTGCGGTGAGTCGCCAGCAATGGCAGAAATCCCTCTCGCTAGTATCCACGATTTTATTCAATTCGCGGATCCAGCATACACCTAC...
48,943
KF792837.1
Feline bocaparvovirus 2
Ng,T.F.F., Mesquita,J.R., Nascimento,M.S., Kondov,N.O., Wong,W., Reuter,G., Knowles,N., Vega,E.M., Esona,M.D., Den,X., Vinje,J., Delwart,E.
Blood Systems Research Institute, Molecular Virology
USA
2013-11-12
POR1
Bocaparvovirus carnivoran4
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,479
GenBank
null
Portugal
Portugal
Felis catus
null
2012-12-01
null
null
Feline bocavirus 2 isolate POR1, complete genome
CAGGTTAATCTAACGCGCGCGCGAAGCGCGCGGCGGCGAAGCCGCCGGCGTTATTTAACCGGCGCGATGACGTGTCAGTGTGGGTGTTGATTCTAGATGATAGAGGTCAACGATTAACCTGACTAGTTAATATGCAACTAACACACCTGTTAAAGATTAACTATCTGTAATCTGATTGGTCAGCATGTTAAACAGATGGGTGGAGCTATCTGTATATATACTGCTGCAACTTCCGTGTAAGCTCATTCTGCTTCCGGCGTTTGAGCTGATCAGACCTCCTGGAGACCTCACGCTTCATCCGTGCGGTGAGTCGCCAGCAA...
92,522
NC_039044.1
Feline bocaparvovirus 3
Zhang,W., Li,L., Deng,X., Kapusinszky,B., Pesavento,P.A., Delwart,E.
National Center for Biotechnology Information, NIH
USA
2018-08-24
FBD1
Bocaparvovirus carnivoran5
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,407
RefSeq
1
USA
USA
Felis catus
feces
2013-10
null
PRJNA485481
Feline bocaparvovirus 3 isolate FBD1, complete genome
ACGCGCGCGCGAAGCGCGCGGCGGCGAAGCCGCCGGCGTTATTTAACCGGCGCGATGACGTGTAAGTGTAGGTGGTATGTTAAGACTATAAGGATCAATGATAGGTTCAGCCATGTAATGATTAACTGACCTTTAACATGATTGGTTGAGAGTTAATGATTAACACATGACCTTTACAATGATTGGTTCTCTGAACCTATAAAAGGAGATGCATTTCCGTATCTGTGTCATTCTGCTTCCGGCGCTCGACGAGAGAGGAACTCCTGGAGCCATCTCGATACCTGCGATCGGTGAGTCGCCAGCAATGGCTGAATTCGATC...
4,198
ON595886.1
Feline bocaparvovirus 3
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-12-06
FPV-2
Bocaparvovirus carnivoran5
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,353
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578125
PRJNA841246
MAG: Feline bocaparvovirus 3 isolate FPV-2, complete genome
GTGTGTTTGGTGTGTTTTGTACTATAGGGATCAATGATAGGTTCAGCCATGTAATAATTAACTGACCTTTAATGTGATTGGTTGGGAGTTAATGATTAACACATGACCTTTACAATGATTGGTTCTCTGAAACTATAAAAGGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGAGAGGAACTCCTGGAGTCATCTCAATACCTGCGATCGGTGAGTCGCCAGCAATGGCTGAATTCGATCTGGCTAGCATCGACGATTTCGTCCAATTTGCAGACCCAGCATACACCTATGTGCTGCGTCTACC...
21,522
ON595885.1
Feline bocaparvovirus 3
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-1
Bocaparvovirus carnivoran5
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,422
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578127
PRJNA841246
MAG: Feline bocaparvovirus 3 isolate FPV-1, complete genome
ATCTAACGCGCGCGCGAAGCGCGCGGCGGCGAAGCCGCCGGCGTTATTTAACCGGCGCGATGACGTGTAAGTGTAGGTGGTATGTTAAGACTATAGGGATCAATGATAGGTTCAGCCATATAATGATTAACTGACCTTTAACATGATTGGTTGAGAGTTAATGATTAACACATGACCTTTACAATGATTGGTTCTCTGAACCTATAAAAGAAGCTGCATTTCCGTGTCTGTATCATTCTGCTTCCGGCGCTCGACGAGAGAGGAACTCCTGGAGCCATCTCGATACCTGCGATCGGTGAGTCGCCAGCAATGGCTGAATT...
21,826
ON595887.1
Feline bocaparvovirus 3
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-3
Bocaparvovirus carnivoran5
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,424
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578126
PRJNA841246
MAG: Feline bocaparvovirus 3 isolate FPV-3, complete genome
AAATAACGCCGGCGGCTTCGCCGCCGCGCGCTTCGCGCGCGCGTTAGATCAACCAGGCGCGATGACGTGTAAGTGTAGGTGGTATGTTAAGACTATAGGGATCAATGATAGGTCCAGCCATGTAATAATTAACTGACCTTTAACGTGATTGGTTAAGAGTTAATGATTAACATATGACCTTTACAATGATTGGTTCTCTGAACCTATAAAAGGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGAGAGGAACTCCTGGAGCCATCTCGATACCTGCAATTGGTGAGTCGCCAGCAATGGCTGAA...
21,827
ON595889.1
Feline bocaparvovirus 3
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-1
Bocaparvovirus carnivoran5
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,423
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578142
PRJNA841246
MAG: Feline bocaparvovirus 3 isolate HC-1, complete genome
ATAACGCCGGCGGCTTCGCCGCCGCGCGCTTCGCGCGCGCGTTAGATCAACCAGGCGCGATGACGTGTAAGTGTAGGTGGTATGTTAAGACTATAGGGATCAATGATAGGTCCAGCCATGTAATGATTAACTGACCTTTAACGTGATTGGTTAAGAGTTAATGATTAACATATGACCTTTACAATGATTGGTTCTCTAAAACTATAAAAAGATCTGCATTTCCGTGTCTGTATCATTCTGCTTCCGGCGCTCGACGAGAGAGGAACTCCTGGAGCCATCTCGATACCTGCAATTGGTGAGTCGCCAGCAATGGCTGAATT...
21,828
MT633127.1
Feline bocaparvovirus 3
Guo,X., Li,W., Wang,Y.
Anhui Agricultural University, Animal Science and Technologial College
China
2020-06-23
HFXA-18
Bocaparvovirus carnivoran5
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,420
GenBank
null
China
China
Felis catus
feces
2019-08
null
null
Feline bocaparvovirus 3 isolate HFXA-18, complete genome
ACGCGCGCGCGAAGCGCGCGGCGGCGAAGCCGCCGGCGTTATTTAACCGGCGCGATGACGTGTAAGTGTAGGTGGTATGTTAAGACTATAGGGATCAATGATAGGTTCAGCCATGTAATGATTAACTGACCTTTAACGTGATTGGTTGAGAGTTAATGATTAACACATGACCTTTACAATGATTGGTTCTCTGAAACTATATAAGGAGCTGCATTTCCGTATCTGTGTCATTCTGCTTCCGGCGCTCGACGAGAGAAGAACTCCTGGAGCCATCTCGATACCTGCGATCGGTGAGTCGCCAGCAATGGCTGAATTCGATC...
48,944
MT633128.1
Feline bocaparvovirus 3
Guo,X., Li,W., Wang,Y.
Anhui Agricultural University, Animal Science and Technologial College
China
2020-06-23
HFTH-22
Bocaparvovirus carnivoran5
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,417
GenBank
null
China
China
Felis catus
feces
2019-08
null
null
Feline bocaparvovirus 3 isolate HFTH-22, complete genome
ACGCGCGCGCGAAGCGCGCGGCGTGGAAGCCGCCGGCGTTATTTAACCGGCGCGATGACGTGTAAGTGTAGGTGGTATGTTAAGACTATAGGGATCAATGATAGGTTCAGCCATGTAATGATTAACTGACCTTTAACATGATTGGTTGATGGTTAATGATTAACATGTGACCTTTAAGATGATTGGTTCTCTGAACCTATAAAAGGAGCTGTATTTCCGCGTCTGTGTCATTCTGCTTCCGGCGCTAGACAAGAGAGGAACTCCTGGAGCCATCTCGATACCTGCGATCGGTGAGTCGCCAGCAATGGCTGAATTCGATC...
48,945
KM017744.1
Feline bocaparvovirus 3
Zhang,W., Li,L., Deng,X., Kapusinszky,B., Pesavento,P.A., Delwart,E.
Blood Systems Research Institute, Molecular virology
USA
2014-08-11
FBD1
Bocaparvovirus carnivoran5
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,407
GenBank
1
USA
USA
Felis catus
feces
2013-10
null
null
Feline bocaparvovirus 3 isolate FBD1, complete genome
ACGCGCGCGCGAAGCGCGCGGCGGCGAAGCCGCCGGCGTTATTTAACCGGCGCGATGACGTGTAAGTGTAGGTGGTATGTTAAGACTATAAGGATCAATGATAGGTTCAGCCATGTAATGATTAACTGACCTTTAACATGATTGGTTGAGAGTTAATGATTAACACATGACCTTTACAATGATTGGTTCTCTGAACCTATAAAAGGAGATGCATTTCCGTATCTGTGTCATTCTGCTTCCGGCGCTCGACGAGAGAGGAACTCCTGGAGCCATCTCGATACCTGCGATCGGTGAGTCGCCAGCAATGGCTGAATTCGATC...
89,224
NC_017823.1
Feline bocavirus
Lau,S.K., Woo,P.C., Yeung,H.C., Teng,J.L., Wu,Y., Bai,R., Fan,R.Y., Chan,K.H., Yuen,K.Y., Lau,S.K.P., Woo,P.C.Y., Teng,J.L.L., Fan,R.Y.Y.
National Center for Biotechnology Information, NIH
USA
2012-05-04
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,331
RefSeq
1
Hong Kong
Hong Kong
Felis catus
null
2009-12-22
null
PRJNA485481
Feline bocavirus, complete genome
CCTGGCGCGATGACGTGTCAGTGAGGGTGTTGTCTAAAGACTATAGGGATCAATGATAGGTTCAGCCATGTAATGATTAACTGACCTTTAACGTGATTGGTTGGGAGTTAATGATTAACATGTGACCTTTACAGTGATTGGTTCTCTGAACCTATAAAAAGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCGTCAATTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACAT...
7,335
OR544345.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,053
GenBank
null
China
China
Felis catus
null
2021
null
null
Feline bocavirus strain NG/104, complete genome
TGTGAGTCGCCAGCAATGGCAGAAATCCCTCTCGCTAGTATCCACGATTTTATTCAATTCGCGGATCCAGCATACACCTACGTGTTGCGTTTACCATTACCTGACTATTCAGATTATGAGAAAGCTCTCCAGAATGCGTTATGCTCTGACTATCCGGACCTACTGGACAATATTGAGATGTTTGCTACAATGCCAGGACCAGACAGTCCACGCGCTCAACTTGATTTTCTGGAGCGTTACGGTCCTGAGAAAAGCTTCTGCGTAGAGTTAGCTCACAGTGCGCATATGGCTGCGTTTAATATGTTTAGCTCTAAGCAGGG...
11,998
OR544346.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,053
GenBank
null
China
China
Felis catus
null
2022
null
null
Feline bocavirus strain DL/102, complete genome
TGTGAGTCGCCAGCAATGGCAGAAATCCCTCTCGCTAGTATCCACGATTTTATTCAATTCGCGGATCCAGCATACACCTACGTGTTGCGTTTACCATTACCTGACTATTCAGATTATGAGAAAGCTCTCCAGAATGCGTTATGCTCTGACTATCCGGACCTACTGGACAATATTGAGATGTTTGCTACAATGCCAGGACCAGACAGTCCACGCGCTCAACTTGATTTTCTGGAGCGTTACGGTCCTGAGAAAAGCTTCTGCGTAGAGTTAGCTCACAGTGCGCATATGGCTGCGTTTAATATGTTTAGCTCTAAGCAGGG...
11,999
OR544347.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,052
GenBank
null
China
China
Felis catus
null
2020
null
null
Feline bocavirus strain XF/153, complete genome
GGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGATTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCATTACCTGCAGGGGAAAATTATGAAAGCCAGCTACAAAATGTATTATGCGCTCGATACCCCGATTTATTATCCGATCCGGCATTGTTCGCAACAATGCCTGGACCTGAATCTCCAGGCGCTCAAACTGATTTTTTGGAGCGTTTTGGTCCTAGCCGCTGCTTTGGGGCTGAAATCTGCTATGCGGCGCATATGGCAGCCTTTAGCTTCTTTAGTAGAAAGCAAGG...
12,000
OR544348.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,053
GenBank
null
China
China
Felis catus
null
2022
null
null
Feline bocavirus strain XF/148, complete genome
GGTGAGTCGCCATCAATGGCTGAATTCGATACAGCGAGTCTCGACGACTTCGTCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCATTACCTACAGGGGAAAATTATGAGAGCCAGCTACAGAATGTATTATGCGCTCGATACCCCGATTTATTATCCGATCCGGCATTGTTCGCAACAATGCCTGGACCTGAATCTCCAGGCGCTCAGACTGATTTTCTGGAGCGTTTTGGTCCTAGCCGCTGCTTTGGGGCTGAAGTCTGCTATGCGGCGCATATGGCAGCCTTTAACTTCTTTAGTAGGAAACAAGG...
12,001
OR544349.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,053
GenBank
null
China
China
Felis catus
null
2021
null
null
Feline bocavirus strain DL/143, complete genome
GGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCATTACCTACAGGGGAAAATTATGAGAGCGAGCTACAGAATGTATTATGCGCTCGATACCCCGATTTATTATCCGATCCGGCATTGTTCGCAACAATGCCTGGACCTGAATCTCCAGGCGCTCAGACTGATTTTTTGGAGCGTTTTGGTCCTAGCCGCTGCTTTGGGGCTGAAGTCTGCTATGCGGCGCATATGGCAGCCTTTAACTTCTTTAGTAGGAAACAGGG...
12,002
OR544350.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,052
GenBank
null
China
China
Felis catus
null
2021
null
null
Feline bocavirus strain NG/74, complete genome
GGTGAGTCGACATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCATTACCTGCAGAGGGGAATTATGAGAGCCAGCTACAGAATGTATTATGCGCTCGATACCCCGATTTATTATCCGATCCGGCATTGTTCGCAACAATGCCTGGACCTGAATCTCCAGGCGCTCAAACTGATTTTTTGGAGCGTTTTGGTCCTAGCCGCTGCTTTGGGGCTGAAGTCTGCTATGCGGCGCATATGGCAGCCTTTAATTACTTTAGTAGGAAACAAGG...
12,003
OR544351.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,052
GenBank
null
China
China
Felis catus
null
2020
null
null
Feline bocavirus strain SB/266, complete genome
GGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGATTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCATTACCTGCAGGGGAAAATTATGAAAGCCAGCTACAAAATATATTATGCGCTCGATACCCCGATTTATTATCCGATCCGGCATTGTTCGCAACAATGCCTGGACCTGAATCTCCAGGCGCTCAAACTGATTTTTTGGAGCGTTTTGGTCCTAGCCGGTGCTTTGGGGCTGAAGTCTGCTATGCGGCGCATATGGCAGCCTTTAATTACTTTAGTAGGAAACAAGG...
12,004
OR544352.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,052
GenBank
null
China
China
Felis catus
null
2022
null
null
Feline bocavirus strain SB/127, complete genome
GGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCATTACCTACAGGGGAAAATTATGAGAGCCAGCTACAGAATGTATTATGCGCTCGATACCCCGATTTATTATCCGATCCGGCATTGTTCGCAACAATGCCTGGACCTGAATCTCCAGGCGCTCAGACTGATTTTTTGGAGCGTTTTGGTCCTAGCCGCTGCTTTGGGGCTGAAGTCTGCTATGCGGCGCATATGGCAGCCTTTAACTTCTTTAGTAGGAAACAGGG...
12,005
OR544353.1
Feline bocavirus
Yao,X.
Henan Agriculture University, College of Veterinary Medicine
China
2023-10-17
null
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,158
GenBank
null
China
China
Felis catus
null
2022
null
null
Feline bocavirus strain SB/270, complete genome
GTCTGTGTCATTCTGCTTCCGGCGCTAGACAAGAGAGGAACTCCTGGAGCCATCTCGATACCTGCGATCGGTGAGTCGCCAGCAATGGCTGAATTCGATCTGGCTAGCATCGACGATTTCATCCAATTTGCAGACCCAGCATACACATATGTGCTGCGTCTACCACTACCTAAAGATCAGAATTATGAGGCTCATCTACAGAAAGCACTATGCTACGCTCACGCGGACATCTTGGATGATCCGCTACTCTTTGCTGCCATGCCAGGACCAGAAAGTCCTGGGGCTCAGGCTGATTTTCTGGAGCGCTTTGGTCCTCTGCG...
12,006
OP158215.1
Feline bocavirus
Liu,Y., Sun,L., Tu,Z., Sun,S., Sun,Y., Yi,L., Tu,C., He,B.
Graduate School, Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences
China
2023-03-15
XKBM
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,123
GenBank
1
China: Heilongjiang
China
Prionailurus bengalensis
null
2021
null
null
UNVERIFIED: Feline bocavirus isolate XKBM, complete sequence
TTGACGAGAGTATGGACCTGGAGAAGAACAAGTTCCATCAACTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCATTACCTACAAGGGGAAATTATGAGAGCCAGCTACAGAATGTATTATGCGCTCGATACCCCGATTTATTATCCGATCCGGCATTGTTCGCAACAATGCCTGGACCTGAATCTCCAGGCGCTCAGACTGATTTTTTGGAGCGTTTTGGTCCTAGCCGCTGCTTTGGGGCTGAAGTCTGCTATG...
17,381
ON595895.1
Feline bocavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-1
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,330
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578132
PRJNA841246
MAG: Feline bocavirus isolate FPV-1, complete genome
TGGGGTGTGATGACGTGTCAGTGAGGGTGTTGTCTAAAGACTATAAGGATCAATGATAGGTTCGGCCATGTAATGATTAACTGACCTTTAACGTGATTGGTTGGGAGTTAATGATTAACATGTGACCTTTACAGTGATTGGTTCTCTGAACCTATAAGAGGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCATCAACTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACAT...
21,831
ON595896.1
Feline bocavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-2
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,300
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578125
PRJNA841246
MAG: Feline bocavirus isolate FPV-2, complete genome
GTTTAAAGACTATAGGGATCAATGATAGGTTTAGCCATGTAATGATTAACTGACCTTTAACGTGATTGGTTGAGAGTTAATGATTAACATGTGACCTTTACAGTGATTGGTTCTCTGAACCTATAAGAGGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCATCAATTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCATTACCTGCAGAGGG...
21,832
ON595905.1
Feline bocavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-10
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,320
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578111
PRJNA841246
MAG: Feline bocavirus isolate FPV-10, complete genome
GGTGTGTTTGGTTTGTGTTGTGTAAAGACTATAAGGATCAATGATAGGTTCGGCCATGTAATGATTAACTGACCTTTAACGTGATTGGTTGGGAGTTAATGATTAACATGTGACCTTTACAGTGATTGGTTCTCTGAACCTATAAGAGGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCATCAACTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTC...
21,833
ON595906.1
Feline bocavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-11
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,315
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578126
PRJNA841246
MAG: Feline bocavirus isolate FPV-11, complete genome
GTTTTGGGGGTGTTGTCTAAAGACTATAGGGATCAATGATAGGTTCAGCCATGTAATGATTAACTGACCTTTAACGTGATTGGTTGAAAGTTAATGATTAACATGTGACCTTTACAGTGATTGGTTCTCTGAACCTATAAGAGAAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCATCAACTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCCA...
21,834
ON595907.1
Feline bocavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-1
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,333
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578158
PRJNA841246
MAG: Feline bocavirus isolate HC-1, complete genome
CCAGGCGCGATGACGTGTCAGTGAGGGTGTTGTCTAAAGACTATAGGGATCAATGATAGGTTCAGCCATGTAATGATTAACTGACCTTTAACATGATTGGTTAAGGGTTAATGATTAACATATGACCTTTACAGTGATTGGTTCTCTAAACCTATAAAAGGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCATCAACTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACAT...
21,835
ON595910.1
Feline bocavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-3
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,319
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578167
PRJNA841246
MAG: Feline bocavirus isolate HC-3, complete genome
AGATGTCAGTGAGGGTGTTGTCTAAAGACTATAGGGATCAATGATAGGTTCAGCCATGTAATGATTAACTGACCTTTAAAGTGATTGGTTGAGGGTTAATGATTAACATGTGACCTTTACAGTGATTGGTTCTCTGAACCTATAAGAGGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCGTCACCTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATTCAATTTGCAGACCCAGCATATACATACGTGCTGCGTC...
21,836
ON595912.1
Feline bocavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-5
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,335
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578134
PRJNA841246
MAG: Feline bocavirus isolate HC-5, complete genome
ACCGGCGCGATGACGTGTCAGTGAGGGTGTTGTTTAAAGACTATAGGGATCAATGATAGGTTCAGCCATATAATGATTAACTGACCTTTAACGTGATTGGTTGAGAGTTAATGATTAACATGTGACCTTTACAATGATTGGTTCTCTGAACCTATATAAGGAGCTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCGTCAACTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACAT...
21,837
ON595913.1
Feline bocavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-7
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,332
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578142
PRJNA841246
MAG: Feline bocavirus isolate HC-7, complete genome
CCAGGCGCGATGACGTGTCAGTGAGGGTGTTGTCTAAAGACTATAGGGATCAATGATAGGTCCAGCCATGTAATGATTAACTGACCTTTAACGTGATTGGTTGAGGGTTAATGATTAACATGTGACCTTTACAGTGATTGGTTCTCTGAACCTATAAGAGGAGCTGCATTTCCGTATCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCATCAATTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCGAGTCTCGACGACTTCGTCCAATTTGCAGACCCAGCATATACAT...
21,838
MT636880.1
Feline bocavirus
Guo,X., Li,W., Wang,Y.
Anhui Agricultural University, Animal Science and Technology College
China
2021-08-18
MASCY1
Bocaparvovirus carnivoran3
Bocaparvovirus
Parvoviridae
ssDNA(+/-)
5,317
GenBank
null
China
China
Felis catus
feces
2019-08
null
null
Feline bocavirus isolate MASCY1, complete genome
CTCTCAGAGGTGTTTGTTTAATAGACTATAGAGATCAATGATAGGTTTAGCCATGTAATGATTACTGACCTTTAATGTGATTGGCTGAGAGTTAATGATTAACATGTGACCTTTAAGATGATTGGTTCTATGAACCTATATAAGGAACTGCATTTCCGTGTCTGTGTCATTCTGCTTCCGGCGCTCGACGAGATCGGACCTGGAGAAGAACAAGTTCCATCAACTGGTGAGTCGCCATCAATGGCTGAATTCGATACAGCAAGTCTCGACGACTTCATCCAATTTGCAGACCCAGCATATACATACGTGCTGCGTCTTCC...
38,919
NC_075569.1
Feline calicivirus
Carter,M.J., Milton,I.D., Meanger,J., Bennett,M., Gaskell,R.M., Turner,P.C.
National Center for Biotechnology Information, NIH
USA
2023-05-04
null
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,690
RefSeq
2
null
null
null
null
null
null
PRJNA485481
Feline calicivirus, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAGTGTCCGAAAGGACTTTGTGCACTCTGTCAAGTTAACACTTGCACGGAGGCGCGATCTTCAGTATATTTATAACAAGCTCTCACGCACTATACGTGCTGAGGCTTGCCCTTCTTGTGCTAGTTACGACGTATGTCCTAACTGCACCTCTGGTGACGTCCCGGATGACGGGTCTTCGACAATGTCGATTCCATCATGGGAGGATGTCACAAAGTCTTCAACCTACTCTCTCCTGCTCTCTGAGGACACCTCCGACGAGTTATGCC...
358
NC_001481.2
Feline calicivirus
Sosnovtsev,S., Green,K.Y.
National Center for Biotechnology Information, NIH
USA
1993-08-02
null
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,683
RefSeq
1
null
null
null
null
null
null
PRJNA485481
Feline calicivirus, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAGTGTCCGTAAGGACTTTGTGCACTCCGTTAAGCGTACGCTTCAACGGAGGCGCGATCTTCAGTATCTTTATAACAAGCTTTCTCGCCCTATAAGGGCAGAAGCTTGTCCTTCTTGTGCCAGTTATGACGTTTGTCCTAACTGCACATCTGGTAGCATCCCCGATGATGGGTCTTCCAAAGGACAGATCCCCTCCTGGGAAGATGTTACAAAAACTTCTACCTACTCTCTCTTGTTGTCTGAGGACACATCCGACGAACTGCACC...
8,984
PP061537.1
Feline calicivirus
Liu,G.Q., Meng,C.C., Tan,X.M.
Shanghai Institute of Veterinary Medicine, CAAS, Team for Companion Animal Biosafety and Prevention Technology
China
2024-01-24
SJ14
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,712
GenBank
null
China
China
Felis catus
oronasopharynx
2022-12-10
null
null
Feline calicivirus isolate SJ14, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACCCACAGTGTCCGTAAGGACTTTGTGCACTCCGTCAAGTTAACACTTGCCCGGAGGCGCGATCTTCAGTATCTTTATAACAGGCTATCTCGTACTTTCCGTGCGGAAACCTGTCCTTCATGTGCTAGTTATGACGTTTGTCCTAACTGCGCATCTGGTGATATCCCTGATGATGGATCGTCAATTAACTCGATTCCATCTTGGGAAGATGTCACCAAAACATCTACCTATTCTCTCCTATTGTCTGAGGATACGACCGACGAGCTCTGCC...
9,496
PP061538.1
Feline calicivirus
Liu,G.Q., Meng,C.C., Tan,X.M.
Shanghai Institute of Veterinary Medicine, CAAS, Team for Companion Animal Biosafety and Prevention Technology
China
2024-01-24
SJ17
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,703
GenBank
null
China
China
Felis catus
oronasopharynx
2022-12-10
null
null
Feline calicivirus isolate SJ17, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAGTGTCCGTAAGGACTTTGTGCACTCCGTCAAGTTAACGCTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAGGCTTTCTCGCACTCTTCGTGCGGAAGCTTGTCCTTCATGTGCCAGTTATGACGTTTGTCCTAACTGCACCTCTGGTGACATTCCTGATGATGGGTCGTCAATTAACTCGATTCCATCTTGGGAGGACGTCACCAAAACATCTACCTACTCTCTCTTACTGTCTGAGGATACAACCGATGAGCTCTGCC...
9,497
PP061539.1
Feline calicivirus
Liu,G.Q., Meng,C.C., Tan,X.M.
Shanghai Institute of Veterinary Medicine, CAAS, Team for Companion Animal Biosafety and Prevention Technology
China
2024-01-24
XA13
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,703
GenBank
null
China
China
Felis catus
oronasopharynx
2022-12-10
null
null
Feline calicivirus isolate XA13, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTAAAAACTCACAGCGTCCGCAAGGACTTTGTGCACTCCGTCAAGTTAACACTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAAGCTCTCTCGCGCTATTCGCGCTGAGGCTTGTCCCTCTTGTGCTAGTTATGACGTTTGTCCTAACTGCACTTCTGGTGATATTCCCGATGATGGGTCGTCAATTAACTCGATTCCATCTTGGGAAGACGTTACCAAAACATCCACTTACTCTCTCCTGTTGTCTGAGGATACGACCGATGAACTCTGCC...
9,498
PP061540.1
Feline calicivirus
Liu,G.Q., Meng,C.C., Tan,X.M.
Shanghai Institute of Veterinary Medicine, CAAS, Team for Companion Animal Biosafety and Prevention Technology
China
2024-01-24
XA15
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,703
GenBank
null
China
China
Felis catus
oronasopharynx
2022-12-10
null
null
Feline calicivirus isolate XA15, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAGCGTCCGTAAGGACTTTGTGCACTCCGTCAAGCTAACGCTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAGGCTCTCTCGCACCATTCGTGCTGAGGCCTGCCCCTCTTGTGCTAGTTATGACATTTGTCCTAACTGCACTTCTGGTGATATTCCCAATGATGGGTCGTCAATTAACTCGATCCCGTCTTGGGAGGATGTTACCAAAACATCTACCTATTCTCTCCTACTGTCTGAGGATACGACCGATGAGCTCTGCC...
9,499
OR791865.1
Feline calicivirus
Liu,G., Meng,C., Tan,X.
Shanghai Institute of Veterinary Medicine, CAAS, Team for Companion Animal Biosafety and Prevention Technology
China
2023-11-25
XA20
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,687
GenBank
null
China
China
Feliformia
oronasopharynx
2022-12-10
null
null
Feline calicivirus isolate XA20, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTAAAACCTCACAATGTTAAACAAGACTTTGTGCAATCCGTCAAGGAAACCCTTAGACGGAGGCGCGAGTTACAGTATTCTTTAAACAGGCTTGAGCGCGCTATGCGCCTCGAAGCTTGCCCCTCTTGTGCTAGTTACGACGTTTGTCCTAACTGCACTTCCCGTGATATCCCGGATGATGGTTCCAATGTTGGATCCATCCCTTCCTGGGAAGAAGTCACAAAGACCTCTACCTATTCTCTCTTGATCTCGGAAGACACGGCTGATGAACTTGATG...
10,638
OR227749.1
Feline calicivirus
Zhong,Z.T., Gong,Y.H., Zhu,W.S., OuYang,M.H., Fu,S.J., Xu,S.P., Gao,M.R., Zou,Y.L., Li,K.
Yichun University, College of Life Sciences and Resources and Environment
China
2023-09-16
null
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,683
GenBank
null
China
China
Feliformia
oronasopharynx
2021
null
null
Feline calicivirus strain CN/YCZT/2021, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAGCGTCCGAAAGGACTTTGTGCACTCCGTCAAGCGAACGCTTGCACGGAGGCGCGATCTTCAGTATCTTAATAACAAGCTCTCACGTTCTATGCGTGCAGAGGCTTGTCCCTCTTGTGCTAGTTACGACGTTTGTCCTAACTGCACATCTGGTGATATCCCCGATGATGGGTCATCAACGATGACCATACCGTCATGGGAGGAAATCACCAAAACTTCAACTTACTCTCTACTCCTATCAGAAGACACCTCTGATGAACTCTGCC...
12,950
OQ814183.1
Feline calicivirus
Liu,G., Meng,C., Lin,L.
Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Companion Animal Team
China
2023-07-31
AH17
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,705
GenBank
null
China
China
Feliformia
null
2022
null
null
Feline calicivirus isolate AH17, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTAAAAACTCACAATGTTAGAAATGACTTTGTGCAATCCGTCAAGGAAACTCTTAGACGGAGGCGCGAGTTACAGTACTCTTTAAACAAGCTCGAGCGCTCTATGCGCCTTGAAGCTTGTCCTTCCTGTGCTAGTTATGACATTTGTCCTAACTGCACTTCTCGTGACATCCCTGATGATGGATCTAGTCTTGGATCCATTCCATCTTGGGAAGACGTCACAAAAACCTCTACCTATTCTCTCTTGCTCTCTGAAGATACGGCTGACGAACTCGATG...
14,500
OQ814184.1
Feline calicivirus
Liu,G., Meng,C., Lin,L.
Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Companion Animal Team
China
2023-07-31
FX5
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,684
GenBank
null
China
China
Feliformia
null
2022
null
null
Feline calicivirus isolate FX5, complete genome
GTAAAAGAAATCTGAGACAATGTCTCAAACTCTGAGCTCCGTGCTAAAAACTCACAATGTCAAAAAAGACTTTGTGCAATCCGTTAAGCTTACGCTTAAACGGAGGCGCGAGTTACAGTATCTTTATAACAGGCTGAGTCATGCTATGCGTGCTGAAGCCTGTCCCTCTTGTGCTAGTTATGACGTTTGTCCTAACTGTACCTCAGGTAACATCCCTGACGATGGTTCCTCTGTAGGATCCATTCCGTCATGGGAAGAAGTTACCAAAACTGCTACCTATTCTCTGTTGCTCTCTGAAGATACGGCTGACGAACTTGATG...
14,501
OQ814185.1
Feline calicivirus
Liu,G., Meng,C., Lin,L.
Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Companion Animal Team
China
2023-07-31
GZ-VSD
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,705
GenBank
null
China
China
Feliformia
null
2022
null
null
Feline calicivirus isolate GZ-VSD, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAGCGTCCGTAAGGACTTTGTGCACTCCGTCAAGTTAACGCTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAGGCTCTCTCGCACTTTCCGTGCTGAGGCCTGCCCCTCCTGTGCTAGTTACGACATTTGTCCTAACTGCACTTCTGGTAGCATCCCTGATGATGGGTCGTCAATGAACTCGATCCCATCTTGGGAAGACGTCACCAAAACATCCACTTACTCTCTCCTGTTGTCTGAGGATACGACCGATGAGCTCTGCC...
14,502
ON360072.1
Feline calicivirus
Lu,C., Liu,X., Song,R., Tao,W., Yu,Y., Yang,H., Shan,H., Zhang,C.
Qingdao Agricultural University
China
2023-07-22
FCV-164
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,706
GenBank
null
China
China
Felis catus
oronasopharynx
2020-06-23
null
null
Feline calicivirus isolate FCV-164, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTCTTTGCCTAAAACTCACAGTGTCCGTAAGGACTTTGTGCACTCCGTCAAGTTAACACTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAGGCTCTCTCGCACTGTTCGTGCCGAGGCCTGTCCCTCTTGTGCTAGTTATGACGTCTGTCCTAACTGCACTTCTGGTAACATTCCTGATGATGGGTCGTCAATAAATTCGATTCCATCTTGGGAAGACGTTACTAAAACTTCTACTTACTCTCTCCTGTTGTCCGAGGATACGACCGATGAGCTCTGCC...
14,612
ON360073.1
Feline calicivirus
Lu,C., Liu,X., Song,R., Tao,W., Yu,Y., Yang,H., Shan,H., Zhang,C.
Qingdao Agricultural University
China
2023-07-22
FCV-7
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,705
GenBank
null
China
China
Felis catus
oronasopharynx
2019-12-30
null
null
Feline calicivirus isolate FCV-7, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTAAAAACTCCCAATGTCAGAAAGGACTTTGTGCAATCCGTTAAGCTTACGCTTAAACGGAGGCGCGAAAGTCAGTACATTCTAAATAAACTTAGGCGTGTGTTCCGCGCTGAAGTTTGCCCCTCATGTGCCAGTTACGACATTTGTCCTAACTGCACATCTGGTGATATCCCAGATGACGGAACCTCCCTTGGGAGCATCCCATCCTGGGAAGATGTCACCAAAACCCCCACCTACTCGCTCCTACTATCTGAGGACACAACTGATGAACTGTCCG...
14,613
OQ472996.1
Feline calicivirus
Chen,Y.C., Chen,T.Y., Huang,Z.X., Luo,J., Guo,F.X.
South China Agricultural University, Veterinary Medicine
China
2023-07-03
FCV-GDJM202201
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,722
GenBank
null
China
China
Felis catus
null
2022
null
null
Feline calicivirus isolate FCV-GDJM202201, complete genome
GTAAAAGAATTTTGAGACAATGTCTCAAGCTCTGAGCTTCGTGCTAAAAACTCACAATGTTAGAAAAGACTTTGTGCAATCCGTTAAGGAAACTCTTACACGGAGGCGCGAGTTACAGTATTCTTTAAACAAGCTTGAGCGTGCTATACGTCTCGAAGCTTGTCCTTCCTGTGCTAGTTATGACGTCTGTCCTAACTGCACATCTCATAACATCCCTGACGATGGAACCAGCGTTGGAACCATACCGTCTTGGGAAGAGGTCACAAAAACCTCTACCTACTCTCTGTTACTCTCTGAAGATACGGCTGACGAACTTGATG...
14,803
OP626899.1
Feline calicivirus
Lanave,G., Buonavoglia,A., Pellegrini,F., Martino,B.D., Profio,F.D., Diakoudi,G., Catella,C., Omar,A.H., Vasinioti,V.I., Cardone,R., Santo,G., Martella,V., Camero,M.
Universita degli studi di Bari, Medicina Veterinaria
null
2023-06-07
460/20-1 OS
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,687
GenBank
null
Italy
Italy
Felis catus
oronasopharynx
2020
null
null
Feline calicivirus isolate 460/20-1 OS, complete genome
AAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAATGTCCGCAAAGACTTTGTGCACTCCGTCAAGCTTACGCTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAAGCTCTCTCGCACCATGCGTGCTGAGGCTTGTCCCTCTTGTGCTAGTTATGACGTCTGTCCTAACTGCACTTCTAGTGATATTCCTGACGACGGTTCGTCAATGAACTCGATACCGTCTTGGGAGGATGTCACAAAAACCTCAACCTATTCTCTCTTGCTTTCCGAGGACACTTCTGACGAGCTCTGCCCTGA...
15,292
OP626900.1
Feline calicivirus
Lanave,G., Buonavoglia,A., Pellegrini,F., Martino,B.D., Profio,F.D., Diakoudi,G., Catella,C., Omar,A.H., Vasinioti,V.I., Cardone,R., Santo,G., Martella,V., Camero,M.
Universita degli studi di Bari, Medicina Veterinaria
null
2023-06-07
460/20-1 RS
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,687
GenBank
null
Italy
Italy
Felis catus
feces
2020
null
null
Feline calicivirus isolate 460/20-1 RS, complete genome
AAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAATGTCCGCAAAGACTTTGTGCACTCCGTCAAGCTTACGCTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAAGCTCTCTCGCACCATGCGTGCTGAGGCTTGTCCCTCTTGTGCTAGTTATGACGTCTGTCCTAACTGCACTTCTAGTGATATTCCTGACGACGGTTCGTCAATGAACTCGATACCGTCTTGGGAGGATGTCACAAAAACCTCAACCTATTCTCTCTTGCTTTCCGAGGACACTTCTGACGAGCTCTGCCCTGA...
15,293
OP626901.1
Feline calicivirus
Lanave,G., Buonavoglia,A., Pellegrini,F., Martino,B.D., Profio,F.D., Diakoudi,G., Catella,C., Omar,A.H., Vasinioti,V.I., Cardone,R., Santo,G., Martella,V., Camero,M.
Universita degli studi di Bari, Medicina Veterinaria
null
2023-06-07
460/20-2 RS
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,687
GenBank
null
Italy
Italy
Felis catus
feces
2020
null
null
Feline calicivirus isolate 460/20-2 RS, complete genome
AAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAATGTCCGCAAAGACTTTGTGCACTCCGTCAAGCTTACGCTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAAGCTCTCTCGCACCATGCGTGCTGAGGCTTGTCCCTCTTGTGCTAGTTATGACGTCTGTCCTAACTGCACTTCTAGTGATATTCCTGACGACGGTTCGTCAATGAACTCGATACCGTCTTGGGAGGATGTCACAAAAACCTCAACCTATTCTCTCTTGCTTTCCGAGGACACTTCTGACGAGCTCTGCCCTGA...
15,294
OP485690.1
Feline calicivirus
Sun,F., Chen,Y.
College of Animal Science and Technology, Guangxi University, Laboratory of Animal Infectious Diseases and Molecular Immunology
China
2023-04-19
Canine/GXHC01-21
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,721
GenBank
null
China
China
Canis lupus familiaris
null
2022-01-06
null
null
Feline calicivirus isolate Canine/GXHC01-21, complete genome
GTAAAAGAAATTTGAGACAATGTTCCAACCTCTGAGCTTCGTGCTTAAAACCCACAGTGTCCGTAAGGACTTTGTGCACTCCGTCAAGTTAACACTTGCTCGGAGGCGCGATCTTCAGTATTTCTACAACAGGCTTTCTCGCACCTTTCGTGCAGAAGCCTGCCCTTCATGTGCTAGTTATGACGTTTGTCCTAACTGCACTTCTGGTGATATTCCTGATGATGGGTCGTCAATTAAATCGATTCCATCTTGGGAAGATGTCACCAAAACATCTACTTACTCTCTCTTGCTGTCTGAGGATACAACCGATGAGCTCTGTC...
16,636
OP485691.1
Feline calicivirus
Sun,F., Chen,Y.
College of Animal Science and Technology, Guangxi University, Laboratory of Animal Infectious Diseases and Molecular Immunology
China
2023-04-19
Canine/GXNN10-21
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,722
GenBank
null
China
China
Canis lupus familiaris
null
2022-01-06
null
null
Feline calicivirus isolate Canine/GXNN10-21, complete genome
GTAAAAGAAATTTGAGGCAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAACGTCCGTAAGGACTTTGTGCACTCCGTCAAGTTAACACTTGCTCGGAGGCGCGATCTTCAGTATTTCTATAACAGGCTCTCTCGCACTATCCGTGCTGAGGCCTGCCCCTCTTGTGCTAGTTATGACATCTGTCCTAACTGCACTTCTGGTAGCATTCCTGATGATGGGTCGTCAATTAACTCGATTCCATCCTGGGAAGACGTTACCAAAACTTCCACTTACTCTCTATTGCTGTCTGAGGATACGACCGATGAACTCTGCC...
16,637
OP137265.1
Feline calicivirus
Li,J.
Guangzhou Yuanbo Medical Technology Co., Ltd, Research and development department
China
2023-04-01
DGCV03
Feline calicivirus
Vesivirus
Caliciviridae
ssRNA(+)
7,708
GenBank
null
China
China
Feliformia
null
2020-07-13
null
null
Feline calicivirus isolate DGCV03, complete genome
GTAAAAGAAATTTGAGACAATGTCTCAAACTCTGAGCTTCGTGCTTAAAACTCACAACGTCCGTAAGGACTTTGTGCACTCCGTCAAGCTAACGCTTGCTCGGAGGCGCGATCTTCAGTATTTCTACAACAAGCTTTCTCGCACTATTCGTGCGGAGGCTTGCCCTTCATGTGCTAGTTACGACATCTGTCCTAACTGCACTTCTGGTGACATTCCCGATGATGGGTCGTCAATGAACTCGATTCCATCTTGGGAAGACGTCACAAAAACTTCTACCTATTCTCTCTTGCTGTCTGAGGATACGACCGACGAGCTCTGCC...
16,966
OR711916.1
Feline coronavirus
Zhao,F.
Heilongjiang Bayi Agricultural University, Laboratory for the Prevention and Control of Swine Infectious Diseases
China
2023-11-19
DQ2023
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,032
GenBank
null
China
China
Felis catus
null
2023
null
null
UNVERIFIED: Feline coronavirus isolate DQ2023, complete genome
TTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGAATGAGTTCCAAACAATTTAAGATCCTCGTTAATGAGGACTACCAAGTCAACGT...
10,814
OP542206.1
Feline coronavirus
Aplasca,A.C., Martinez,M.P., Evans,S.J.M., Martinez,M.E., Cianciolo,R.E., Bundschuh,M., Puchulu-Campanella,E., Chen,X., Yan,P., Bundschuh,R., Seeley,K.E., Bapodra-Villaverde,P., Garner,M.M., Junge,R.E., Evans,S., Cianciolo,R.
The Ohio State University, Department of Physics
USA
2023-10-27
2020-FM3
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,243
GenBank
1
USA: Ohio
USA
Felis margarita
null
2020-04-29
null
null
Feline coronavirus isolate 2020-FM3, complete genome
CGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCATTCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCGCCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCTGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGAATGAGTTCCAAACACTTTAAGATCCTCATTAAT...
11,570
LC742526.1
Feline coronavirus
Oguma,K., Ohno,M., Yoshida,M., Sentsui,H.
College of Bioresource Sciences, Laboratory of Veterinary Epizootiology; 1866 Kameino, Fujisawa, Kanagawa 252-0880
Japan
2022-12-15
FCoV/I/JP15/Fe/35/2015
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
28,225
GenBank
1
Japan:Niigata
Japan
Felis catus
null
2015-08-15
null
null
Feline coronavirus FCoV/I/JP15/Fe/35/2015 RNA, nearly complete genome
GATTGGACTGGTTTTAAGACTGCTTGTTGTGGTCTTCATGGCAAAGTTAAAGGTGTCACATTGGGTGCTGTTAAACCTGGTGATGCTGTTGTCACTAGTATGAGTGCTGGCAAGGGTGTGAAATTCTTTGCTAATAGTGTACTCCAATATGCTGGTGATGTTGAAAATGTCTCTGTTTGGAAAGTTATTAAAACTTTCACTGTTAATGAGACTGTTTGCACCACTGATTTTGAAGGCGAATTGAACGACTTCATTAAACCAGAGAGTACTTCACCTGTTTCATGCTCCATTAAGAGGGCTTTTATCACAGGTGAAGTTGA...
21,083
ON595853.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-1
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,293
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578128
PRJNA841246
MAG: Feline coronavirus isolate FPV-1, complete genome
AGAGAAAGAAAGAGGGAACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTGCTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGC...
21,813
ON595854.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-2
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,260
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578133
PRJNA841246
MAG: Feline coronavirus isolate FPV-2, complete genome
CTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTCACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACTTAGTTTGGTAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCGCCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGAATGAGTTCCAA...
21,814
ON595855.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-3
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,287
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578112
PRJNA841246
MAG: Feline coronavirus isolate FPV-3, complete genome
GCTACACTCACTTTACTTTAAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCCTTCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGAAT...
21,815
ON595856.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-4
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,333
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578121
PRJNA841246
MAG: Feline coronavirus isolate FPV-4, complete genome
TCTTCCGATCTGGAGGGAGGACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTGCTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACCTAGTTTGGCAATCACTCCTTGGAACGGGGTTGAGAGAACGGTGCACCAGGGTTCCGCCTCTGTTTGGTAAGTCGCCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGG...
21,816
ON595857.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-5
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,347
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578114
PRJNA841246
MAG: Feline coronavirus isolate FPV-5, complete genome
ACTCTTCCGATCTAGGGCCTCTTCCGATCTGAGGGGAGGGGTCCCCTCTTCCGATCTGAGGAGGAGGGACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACCCAGTTTGGCAATCACTCCTTGGAACGGGGTTGAGAGAACGGCGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCC...
21,817
ON595858.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
FPV-6
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,334
GenBank
null
Australia
Australia
Felis catus
feces
2017
SAMN28578125
PRJNA841246
MAG: Feline coronavirus isolate FPV-6, complete genome
GGGGGAGGGACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACCCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGTGCGCCAGGGTTCCGTCCCTGTTTGGTAAGTCGCCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGA...
21,818
ON595862.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-1
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,314
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578134
PRJNA841246
MAG: Feline coronavirus isolate HC-1, complete genome
AGGAGAGGGAAGAGCTTTTAAAGTAAAGTGAGTGTAGCATGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCATTCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCGCCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGCTCTCCCTCGCCGGCCGCCAG...
21,819
ON595866.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-5
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,288
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578166
PRJNA841246
MAG: Feline coronavirus isolate HC-5, complete genome
GGAAGAGGAGACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACATCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGACGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGA...
21,820
ON595867.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-6
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,299
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578153
PRJNA841246
MAG: Feline coronavirus isolate HC-6, complete genome
AAGGAGAAGAGAAAGAAAGGAGAACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTGCTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCC...
21,821
ON595868.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-7
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,296
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578159
PRJNA841246
MAG: Feline coronavirus isolate HC-7, complete genome
CGATCTGGAGGAAGAGGAGGACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTGCTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCACCAGGGTTTCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGC...
21,822
ON595869.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-8
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,265
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578154
PRJNA841246
MAG: Feline coronavirus isolate HC-8, complete genome
CGATCTGGAGAGAGAAAGGGACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACATCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGACGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCG...
21,823
ON595870.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-9
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,271
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578135
PRJNA841246
MAG: Feline coronavirus isolate HC-9, complete genome
GAGAGGGAGAACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACCCAGTTTGGTAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCACCAGGGTTCCGCCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAG...
21,824
ON595871.1
Feline coronavirus
Van Brussel,K., Wang,X., Shi,M., Carrai,M., Feng,S., Li,J., Holmes,E.C., Beatty,J.A., Barrs,V.R.
University of Sydney, Science
Australia
2022-11-30
HC-10
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,258
GenBank
null
Australia
Australia
Felis catus
feces
2018
SAMN28578160
PRJNA841246
MAG: Feline coronavirus isolate HC-10, complete genome
TTCCGATCTGGGAGGACGGGACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACATCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGACGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCG...
21,825
MW308128.1
Feline coronavirus
Tekes,G., Ehmann,R., Hain,T., Ziebuhr,J.
Justus Liebig University Giessen, Institute of Medical Virology
Germany
2022-04-17
VP1a
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,294
GenBank
null
Germany: Kassel
Germany
Felis catus
null
2006
null
null
Feline coronavirus isolate VP1a, complete genome
ACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGACACCATAGAAGACAAGCGTTGATTATTTCACCCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCGCCAGGGTTCCGCCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGAATGAGTTCC...
31,246
MT239439.1
Feline coronavirus
Zheng,X., Lu,S., Jiang,Z., Zhu,G.
Key Laboratory of Animal Virology Ministry of Agriculture, College of Animal Science
China
2021-03-10
null
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,347
GenBank
null
China
China
Felis catus
abdominal cavity
2016
null
null
Feline coronavirus strain ZJU1617, complete genome
ACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTACTTTAACTAGCCTAGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACTCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCGCCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGAATGAGTTCCAA...
43,507
MT239440.1
Feline coronavirus
Zheng,X., Lu,S., Zhu,G.
Key Laboratory of Animal Virology Ministry of Agriculture, College of Animal Science
China
2021-03-10
null
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,303
GenBank
null
China
China
Felis catus
abdominal cavity
2017-09
null
null
Feline coronavirus strain ZJU1709, complete genome
ACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTAACTAGCCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGACACCATAGAAGACAAGCGTTGATTATTTCACTCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCGCCAGGGTTCCGCCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGAATGAGTTCC...
43,508
MW030108.1
Feline coronavirus
Wang,G., Peng,G.
Huazhong Agricultural University, State Key Laboratory of Agricultural Microbiology
China
2021-02-17
QS
Alphacoronavirus 1
Alphacoronavirus
Coronaviridae
ssRNA(+)
29,234
GenBank
null
China
China
Felis catus
null
2018-05
null
null
Feline coronavirus isolate QS, complete genome
ACTTTTAAAGTAAAGTGAGTGTAGCGTGGCTATAACTCTTCTTTTACTTTGACTAGTCTTGTGCTAGATTTGTCTTCGGACACCAACTCGAACTAAACGAAATATTTGTCTCTCTATGAAACCATAGAAGACAAGCGTTGATTATTTCACTCAGTTTGGCAATCACTCCTAGGAACGGGGTTGAGAGAACGGCGCACCAGGGTTCCGTCCCTGTTTGGTAAGTCGTCTAGTATTAGCTGCGGCGGTTCCGCCCGTCGTAGTTGGGTAGACCGGGTTCCGTCCTGTGATCTCCCTCGCCGGCCGCCAGGAGAATGAGTTCC...
44,094
NC_039242.1
Feline foamy virus
Winkler,I., Bodem,J., Haas,L., Zemba,M., Delius,H., Flower,R., Flugel,R.M., Lochelt,M., Flower,R.P.
National Center for Biotechnology Information, NIH
USA
2018-08-24
FUV
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,700
RefSeq
2
null
null
null
null
null
null
PRJNA485481
Feline foamy virus DNA, complete genome
TGTCATGGGCCAAAGAGAATTCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGACGATGAGGAAGAAGAAATGTCAGAAAGAGAGGAATTATTGTGCCATATAAATCAGTGTCAACAAAAGCTCTTTTATCCCGGAGGGACGACTGATGTCCTTGGAATGGAAAGCAATGTTTGGCTCACTAAATTTGTTAATATTAAATTTCCTAAAGGAACAAAAGTGATACTTCCTGATGGAAGAAAATTCATAGCCTGTGATCCTGAGCTAAAACCATTATTGCAGGAATTGAAATTCTTGGATAGGGCAACATCTGAGTCA...
4,243
MW389244.1
Feline foamy virus
Aso,S., Sakaguchi,S., Hashimoto-Gotoh,A., Miyazawa,T.
Institute for Frontier Life and Medical Sciences, Kyoto University, Lab. of Virus-Host Coevolution
Japan
2021-08-08
159
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,683
GenBank
null
Japan
Japan
Felis catus
null
null
null
null
Feline foamy virus isolate 159, complete genome
GAATTCTCATAGAGGAGAATACTCCCTACTGCCATCTAGTGACGATGAGGAAGAAGAAATGTCAGAAAGAGAGGAATTATTGTGCCATATAAATCAATGTCAACAAAAGCTTTTTTATCCCGGAGGGACGACTGATGTCCTTGGAATAGAAAGCAATATTTGGCTCACTAAATTTGTTAATATTAAATTTCCTAAAGGAACAAAAGTGATACTTCCTGATGGAAGAAAATTCATAGCCTGTGATCCTGAGCTAAAACCATTATTGCAGGAATTGAAATTCTTGGATAGGGCAACATCTGAGTCATCTGACTCTGAATAGA...
39,536
MW349910.1
Feline foamy virus
Sumiyoshi,A., Miyazawa,T.
Institute for Frontier Life and Medical Science, Kyoto University, Research Center for Infectious Diseases
Japan
2021-08-02
null
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,638
GenBank
null
Viet Nam
Viet Nam
Prionailurus bengalensis
null
null
null
null
Feline foamy virus strain NV138, complete genome
TCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGATGATGAGGAAGAAGAAATGTCGGAAAGAGAGGAATTGTTGTGCCATATAAATCAATGTCAACAAAAGCTCTTTTATCCCGGAGGGACCACTGATGTCCTTGGAATGGAGAGCAATAATTGGCTTGCTAAATTTGTTAATATTAAATTCCCTAAAGGAACAAAAGTGATACTTCCTGATGGAAGAAAATTTATAGCCTGTGATCCTGAGCTGAAGCCATTATTGCAGGAGCTAAAGTTCTTGGATAGGGCAACATCTGAGTCATCTGACTCTGAATAGAAGGC...
39,749
MW349911.1
Feline foamy virus
Sumiyoshi,A., Miyazawa,T.
Institute for Frontier Life and Medical Science, Kyoto University, Research Center for Infectious Diseases
Japan
2021-08-02
null
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,638
GenBank
null
Viet Nam
Viet Nam
Prionailurus bengalensis
null
null
null
null
Feline foamy virus strain SV201, complete genome
TCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGATGATGAGGAAGAAGAAATGTCAGAAAGAGAGGAATTATTGTGCCATATAAATCAATGTCAACAAAAGCTCTTTTATCCCGGAGGGACCACTGATGTCCTTGGAATGGAGAGCAATGATTGGCTTGCTAAATTTGTTAATATTAAATTCCCTAAAGGAACAAAAGTGATACTTCCTGATGGAAGAAAATTTATAGCCTGTGATCCCGAGCTAAAACCTTTATTGCAGGAATTGAAGTTCTTGGATAAGGCAACATCTGAGTCATCTGACTCTGAATAGAAGGC...
39,750
MW349912.1
Feline foamy virus
Sumiyoshi,A., Miyazawa,T.
Institute for Frontier Life and Medical Science, Kyoto University, Research Center for Infectious Diseases
Japan
2021-08-02
null
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,643
GenBank
null
Viet Nam
Viet Nam
Felis catus
null
null
null
null
Feline foamy virus strain VN114, complete genome
TCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGATGATGAGGAAGAAGAAATGTCAGAAAGAGAGGAATTATTGTGCCATATAAATCAATGTCAACAAAAGCTCTTTTATCCCGGAGGGACCACTGATGTCCTTGGAATGGAAAGCAATGATTGGCTTACTAAATTTGTTAATATTAAACTTCCTAAAGGGACAAAAGTGATGCTTCCTGACGGAAGAAAATTTATAGCCTGTGATCCCGAGCTAAAACCTTTATTGCAGGAATTGAAGTTCTTGGATAGGGCAACATCTGAGTCATCTGACTCTGAATAGAAGGC...
39,751
MW349913.1
Feline foamy virus
Sumiyoshi,A., Miyazawa,T.
Institute for Frontier Life and Medical Science, Kyoto University, Research Center for Infectious Diseases
Japan
2021-08-02
null
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,642
GenBank
null
Viet Nam
Viet Nam
Felis catus
null
null
null
null
Feline foamy virus strain VN119, complete genome
TCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGATGATGAGGAAGAAGAAATGTCAGAAAGAGAGGAATTATTGTGCCATATAAATCAATGTCAACAAAAGCTCTTTTATCCCGGAGGGACCACTGATGTCCTTGGAATGGAAAGCAATGATTGGCTTACTAAATTTGTTAATATTAAACTTCCTAAAGGGACAAAAGTGATGTTTCCTGACGGAAGAAAATTTATAGCCTGTGATCCCGAGCTAAAACCTTTATTGCAGGAATTGAAGTTCTTGGATAGGGCAACATCTGAGTCATCTGACTCTGAATAGAAGGC...
39,752
MW349914.1
Feline foamy virus
Sumiyoshi,A., Miyazawa,T.
Institute for Frontier Life and Medical Science, Kyoto University, Research Center for Infectious Diseases
Japan
2021-08-02
null
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,650
GenBank
null
Viet Nam
Viet Nam
Felis catus
null
null
null
null
Feline foamy virus strain VN150, complete genome
TCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGATGATGAGGAAGAAGAAATGTCAGAAAGAGAGGAATTATTGTGCCATATAAATCAATGTCAACAAAAGCTCTTTTATCCCGGAGGGACCACTGATGTCCTTGGAATAGAGAGCAATGATTGGCTTGCTAAATTTGTTAATATTAAATTCCCTAAAGGAACAAAAGTGATACTTCCTGATGGAAGAAAATTTATAGCCTGTGATCCTGAGCTGAAGCCATTATTGCAGGAGTTAAAGTTCTTGGATAGGGCAACATCTGAGTCATCTGACTCTGAATAGAAAAC...
39,753
MW349915.1
Feline foamy virus
Sumiyoshi,A., Miyazawa,T.
Institute for Frontier Life and Medical Science, Kyoto University, Research Center for Infectious Diseases
Japan
2021-08-02
null
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,633
GenBank
null
Viet Nam
Viet Nam
Felis catus
null
null
null
null
Feline foamy virus strain Sammy-1, complete genome
TCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGATGATGAAGAAGAAGAAATGTCGGAGAGGGAGGAATTATTGTGTCATATAAATCAATGTCAACAAAAGCTCTTTTATCCCGGAGGGACCACTGATGTCCTTGGAATGGAGAGCAATGATTGGCTTACTAAATTTGTTAATACTAAATTTCCTAAAGGAACAAAAGTGATACTTCCTGACGGAAGAAAATTTATAGCCTGTGATCCTGAGCTAAAGCCATTATTGCAGGAATTGAAGTTCTTGGATAGGGCAACATCTGAGTCATCTGACTCTGAATAGAAAGC...
39,754
MH633409.1
Feline foamy virus
Kraberger,S., Gagne,E., Malmberg,J., Logan,K., Alldredge,M., Crooks,K., VandeWoude,S.
Colorado State University, Department of Microbiology, Immunology & Pathology
USA
2019-09-30
X132
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,680
GenBank
null
USA
USA
Puma concolor
blood
2006-04-19
null
null
Feline foamy virus isolate X132, complete genome
GAATTCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGACGATGAGGAAGAAGAAATGTCAGAAAGAGAGGAATTATTGTGCCATATAAATCAATGTCAACAAAAGCTCTTTTATCCCGGAGGGACGACTGATGTCCTTGGAATGGAAAGCAATGTTTGGCTCACTAAATTTGTTAATATTAAATTTCCTAAAGGAACAAAAGTGATACTTCCTGATGGAAGAAAATTCATAGCCTGTGATTCTGAGCTAAAACCATTATTGCAGGAATTGAAATTCTTGGATAGGGCAACATCTGAGTCATCTGACTCTGAATAAG...
59,264
MH633410.1
Feline foamy virus
Kraberger,S., Gagne,E., Malmberg,J., Logan,K., Alldredge,M., Crooks,K., VandeWoude,S.
Colorado State University, Department of Microbiology, Immunology & Pathology
USA
2019-09-30
X135
Feline foamy virus
Felispumavirus
Retroviridae
ssRNA-RT
11,650
GenBank
null
USA
USA
Puma concolor
blood
2006-12-14
null
null
Feline foamy virus isolate X135, complete genome
GAATTCTCACAGAGGAGAATACTCTCTGCTGCCATCTAGTGACGATGAGGAAGAAGAAATGTCAGAAAGAGAGGAATTATTGTGTCATATAAATCAATGTCAACAAAAGCTCTTTTATCCCGGAGGGACCACTGATGTCCTTGGAATGGAGAGCAATAATTGGCTTACTAAATTTGTTAATACCAAATTTCCTAAAGGAACAAAAGTGATACTTCCTGACGGAAGAAAATTTATAGCCTGTGATCCTGAATTAAAACCATTATTGCAGGAGCTAAAGTTCTTGGATAGGGCAACATCTGAGTCATCTGACTCTGAATAGA...
59,265