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r2e_gym
train
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coveragepy__da1b282d3b39a6232e4cb798838389f7b16a0795
coveragepy
nedbat/coveragepy
python
da1b282d3b39a6232e4cb798838389f7b16a0795
**Title:** Source Detection Fails for Files Inside `.whl` Archives **Description:** When checking for the existence of source files within `.whl` archives, the system incorrectly reports that the source does not exist. **Example:** Attempting to verify if `foo.py` exists inside `src/files.whl` fails. ```python to_ma...
diff --git a/CHANGES.rst b/CHANGES.rst --- a/CHANGES.rst +++ b/CHANGES.rst @@ -20,6 +20,9 @@ Unreleased ---------- +- When checking if a file mapping resolved to a file that exists, we weren't + considering files in .whl files. This is now fixed, closing `issue 1511`_. + - File pattern rules were too strict, for...
diff --git a/tests/test_files.py b/tests/test_files.py --- a/tests/test_files.py +++ b/tests/test_files.py @@ -86,6 +86,7 @@ ("a/b/c/foo.py", "a/b/c/foo.py", True), ("a/b/c/foo.py", "a/b/c/bar.py", False), ("src/files.zip", "src/files.zip/foo.py", True), + ("src/files.w...
null
null
namanjain12/coveragepy_final:da1b282d3b39a6232e4cb798838389f7b16a0795
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null
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r2e_gym::train::4114
r2e_gym
train
4,114
numpy__11593aa176d491beb0cc5ffcc393956a5435a2bf
numpy
numpy/numpy
python
11593aa176d491beb0cc5ffcc393956a5435a2bf
**Title:** ValueError Raised When Padding an Empty Array with 'reflect' Mode **Description:** Attempting to pad an empty NumPy array using the `'reflect'` mode results in a `ValueError`, even when the padding should be logically permissible. **Example Code:** ```python import numpy as np from numpy.lib import pad # ...
diff --git a/numpy/lib/arraypad.py b/numpy/lib/arraypad.py --- a/numpy/lib/arraypad.py +++ b/numpy/lib/arraypad.py @@ -1406,10 +1406,15 @@ newmat = _append_min(newmat, pad_after, chunk_after, axis) elif mode == 'reflect': - if narray.size == 0: - raise ValueError("There aren't any ...
diff --git a/numpy/lib/tests/test_arraypad.py b/numpy/lib/tests/test_arraypad.py --- a/numpy/lib/tests/test_arraypad.py +++ b/numpy/lib/tests/test_arraypad.py @@ -637,6 +637,11 @@ def test_check_03(self): a = pad([1, 2, 3], 4, 'reflect') b = np.array([1, 2, 3, 2, 1, 2, 3, 2, 1, 2, 3]) + as...
null
null
namanjain12/numpy_final:11593aa176d491beb0cc5ffcc393956a5435a2bf
true
null
1
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r2e_gym::train::6598
r2e_gym
train
6,598
pillow__e258baf30c86ed92b576ae95b2a1df43a6f828d6
pillow
python-pillow/pillow
python
e258baf30c86ed92b576ae95b2a1df43a6f828d6
**Title:** Image.new() Raises ValueError When Size is Provided as a List **Description:** When creating a new image using `Image.new()`, providing the `size` argument as a list results in a `ValueError`. The function currently expects the size to be a tuple, but supporting lists would offer more flexibility. **Exampl...
diff --git a/PIL/Image.py b/PIL/Image.py --- a/PIL/Image.py +++ b/PIL/Image.py @@ -1020,7 +1020,7 @@ 4-tuple defining the left, upper, right, and lower pixel coordinate. - Note: Prior to Pillow 3.4.0, this was a lazy operation. + Note: Prior to Pillow 3.4.0, this was a lazy operation....
diff --git a/Tests/test_image.py b/Tests/test_image.py --- a/Tests/test_image.py +++ b/Tests/test_image.py @@ -238,7 +238,7 @@ self.assert_image_similar(im2, im3, 110) def test_check_size(self): - # Checking that the _check_size function throws value errors when we want it to. + # Checkin...
null
null
namanjain12/pillow_final:e258baf30c86ed92b576ae95b2a1df43a6f828d6
true
null
1
6
null
805
0
0.75
1
0.6375
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0.154167
80.38125
9,203
r2e_gym::train::6459
r2e_gym
train
6,459
pillow__8ada23ed04ee18730d44d14dd82b0aabc12a0917
pillow
python-pillow/pillow
python
8ada23ed04ee18730d44d14dd82b0aabc12a0917
**Title:** AttributeError Raised When Accessing IFD1 in EXIF Data **Description:** When attempting to retrieve the `IFD1` data from an image's EXIF information, an `AttributeError` is thrown because `IFD1` is not recognized within the `ExifTags.IFD` enumeration. **Example Buggy Code:** ```python from PIL import Image...
diff --git a/src/PIL/ExifTags.py b/src/PIL/ExifTags.py --- a/src/PIL/ExifTags.py +++ b/src/PIL/ExifTags.py @@ -353,3 +353,4 @@ GPSInfo = 34853 Makernote = 37500 Interop = 40965 + IFD1 = -1 diff --git a/src/PIL/Image.py b/src/PIL/Image.py --- a/src/PIL/Image.py +++ b/src/PIL/Image.py @@ -3641,17 +3641,...
diff --git a/Tests/test_image.py b/Tests/test_image.py --- a/Tests/test_image.py +++ b/Tests/test_image.py @@ -7,7 +7,14 @@ import pytest -from PIL import Image, ImageDraw, ImagePalette, UnidentifiedImageError, features +from PIL import ( + ExifTags, + Image, + ImageDraw, + ImagePalette, + Unidentif...
null
null
namanjain12/pillow_final:8ada23ed04ee18730d44d14dd82b0aabc12a0917
true
null
2
11
null
704
0
0.75
1
0.6375
1
0.154
80.38075
9,204
r2e_gym::train::6219
r2e_gym
train
6,219
pillow__193c7561392fd12c3bd93bc232d9041c89bec4f6
pillow
python-pillow/pillow
python
193c7561392fd12c3bd93bc232d9041c89bec4f6
**Title**: Saving 'RGBA' Images as JPEG Raises Error Instead of Warning and Conversion **Description**: When attempting to save an image with mode 'RGBA' as JPEG, an error is raised instead of implicitly converting the image to 'RGB' and issuing a deprecation warning. **Example Code**: ```python from PIL import Image...
diff --git a/PIL/JpegImagePlugin.py b/PIL/JpegImagePlugin.py --- a/PIL/JpegImagePlugin.py +++ b/PIL/JpegImagePlugin.py @@ -534,6 +534,7 @@ "1": "L", "L": "L", "RGB": "RGB", + "RGBA": "RGB", "RGBX": "RGB", "CMYK": "CMYK;I", # assume adobe conventions "YCbCr": "YCbCr", @@ -581,6 +582,14 ...
diff --git a/Tests/helper.py b/Tests/helper.py --- a/Tests/helper.py +++ b/Tests/helper.py @@ -99,7 +99,7 @@ " average pixel value difference %.4f > epsilon %.4f" % ( ave_diff, epsilon)) - def assert_warning(self, warn_class, func): + def assert_warning(self, warn_class, func, *arg...
null
null
namanjain12/pillow_final:193c7561392fd12c3bd93bc232d9041c89bec4f6
true
null
1
9
null
744
0
0.75
1
0.6375
1
0.154
80.38075
9,205
r2e_gym::train::4044
r2e_gym
train
4,044
coveragepy__7fb846e8c12b33f9f82964bbb1cef7cc2795d42d
coveragepy
nedbat/coveragepy
python
7fb846e8c12b33f9f82964bbb1cef7cc2795d42d
**Title:** `runpy.run_path(path)` crashes when `path` is a `pathlib.Path` object **Description:** When using `runpy.run_path()` with a `pathlib.Path` object, it results in a crash due to an unexpected attribute error. **Example Code:** ```python import runpy from pathlib import Path script_path = Path('script.py') r...
diff --git a/CHANGES.rst b/CHANGES.rst --- a/CHANGES.rst +++ b/CHANGES.rst @@ -23,7 +23,11 @@ Unreleased ---------- -Nothing yet. +- Fix: coverage used to fail when measuring code using :func:`runpy.run_path + <python:runpy.run_path>` with a :class:`Path <python:pathlib.Path>` argument. + This is now fixed, thank...
diff --git a/tests/test_python.py b/tests/test_python.py --- a/tests/test_python.py +++ b/tests/test_python.py @@ -63,3 +63,24 @@ # If both pyw and py exist, py is preferred a_py.write_text("") assert source_for_file(src + 'c') == src + + +class RunpyTest(CoverageTest): + """Tests using runpy.""" + + ...
null
null
namanjain12/coveragepy_final:7fb846e8c12b33f9f82964bbb1cef7cc2795d42d
true
null
3
10
null
724
0
0.75
1
0.6375
1
0.154
80.38075
9,206
r2e_gym::train::5421
r2e_gym
train
5,421
aiohttp__e4ae01c2077d2cfa116aa82e4ff6866857f7c466
aiohttp
aio-libs/aiohttp
python
e4ae01c2077d2cfa116aa82e4ff6866857f7c466
**Title:** Missing Validation Allows HTTP Methods with Non-Token Characters **Description:** The system currently accepts HTTP methods that contain non-token characters without validation. This can lead to unexpected behavior or potential security vulnerabilities when invalid methods are used. **Example Code:** ```py...
diff --git a/CHANGES/6533.feature b/CHANGES/6533.feature --- a/CHANGES/6533.feature +++ b/CHANGES/6533.feature @@ -0,0 +1 @@ +Add HTTP method validation. diff --git a/aiohttp/client_reqrep.py b/aiohttp/client_reqrep.py --- a/aiohttp/client_reqrep.py +++ b/aiohttp/client_reqrep.py @@ -81,6 +81,7 @@ from .tracing im...
diff --git a/tests/test_client_request.py b/tests/test_client_request.py --- a/tests/test_client_request.py +++ b/tests/test_client_request.py @@ -87,6 +87,11 @@ def test_method3(make_request) -> None: req = make_request("HEAD", "http://python.org/") assert req.method == "HEAD" + + +def test_method_invalid(m...
null
null
namanjain12/aiohttp_final:e4ae01c2077d2cfa116aa82e4ff6866857f7c466
true
null
2
10
null
722
0
0.75
1
0.6375
1
0.153667
80.37975
9,207
r2e_gym::train::5507
r2e_gym
train
5,507
aiohttp__6104dde0eb17d390e8a89c03cbb1fc18d93cc3d0
aiohttp
aio-libs/aiohttp
python
6104dde0eb17d390e8a89c03cbb1fc18d93cc3d0
**Title:** HTTP parser does not reject malformed methods and versions **Description:** The HTTP parser fails to properly validate HTTP method names and version strings. When it receives requests with invalid methods or versions, it does not raise the expected exceptions, allowing malformed HTTP requests to be processe...
diff --git a/CHANGES/7700.bugfix b/CHANGES/7700.bugfix --- a/CHANGES/7700.bugfix +++ b/CHANGES/7700.bugfix @@ -0,0 +1 @@ +Fix issue with insufficient HTTP method and version validation. diff --git a/CONTRIBUTORS.txt b/CONTRIBUTORS.txt --- a/CONTRIBUTORS.txt +++ b/CONTRIBUTORS.txt @@ -51,6 +51,7 @@ Austin Scola Ben Ba...
diff --git a/tests/test_http_parser.py b/tests/test_http_parser.py --- a/tests/test_http_parser.py +++ b/tests/test_http_parser.py @@ -728,7 +728,7 @@ def test_http_request_parser_bad_method(parser) -> None: with pytest.raises(http_exceptions.BadStatusLine): - parser.feed_data(b'=":<G>(e),[T];?" /get HTT...
null
null
namanjain12/aiohttp_final:6104dde0eb17d390e8a89c03cbb1fc18d93cc3d0
true
null
3
8
null
761
0
0.75
1
0.6375
1
0.1535
80.37925
9,208
r2e_gym::train::4570
r2e_gym
train
4,570
numpy__7744de5cb61f279a05f5a8b139e5a8a58b4d8c98
numpy
numpy/numpy
python
7744de5cb61f279a05f5a8b139e5a8a58b4d8c98
**Title:** `numpy.ma.round` Raises AttributeError on Zero-Dimensional Arrays **Description:** When using `numpy.ma.round` on a zero-dimensional masked array, an `AttributeError` is raised instead of returning the expected rounded scalar or `np.ma.masked`. **Example Code:** ```python from numpy.ma import array, masked...
diff --git a/numpy/ma/core.py b/numpy/ma/core.py --- a/numpy/ma/core.py +++ b/numpy/ma/core.py @@ -5107,8 +5107,12 @@ """ result = self._data.round(decimals=decimals, out=out).view(type(self)) - result._mask = self._mask - result._update_from(self) + if result.ndim: + ...
diff --git a/numpy/ma/tests/test_core.py b/numpy/ma/tests/test_core.py --- a/numpy/ma/tests/test_core.py +++ b/numpy/ma/tests/test_core.py @@ -3443,6 +3443,31 @@ result = xm.round(decimals=2, out=output) self.assertTrue(result is output) + def test_round_with_scalar(self): + # Testing roun...
null
null
namanjain12/numpy_final:7744de5cb61f279a05f5a8b139e5a8a58b4d8c98
true
null
1
8
null
761
0
0.75
1
0.6375
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0.1535
80.37925
9,209
r2e_gym::train::7
r2e_gym
train
7
orange3__9b5494e26f407b75e79699c9d40be6df1d80a040
orange3
biolab/orange3
python
9b5494e26f407b75e79699c9d40be6df1d80a040
### Error When Using L1 Penalty with LogisticRegressionLearner When configuring `LogisticRegressionLearner` with `penalty='l1'`, an error is raised because the solver does not support the L1 penalty. **Example Code:** ```python learn = LogisticRegressionLearner(penalty='l1') model = learn(iris_data) ``` **Error Mess...
diff --git a/Orange/classification/logistic_regression.py b/Orange/classification/logistic_regression.py --- a/Orange/classification/logistic_regression.py +++ b/Orange/classification/logistic_regression.py @@ -36,7 +36,22 @@ def __init__(self, penalty="l2", dual=False, tol=0.0001, C=1.0, fit_i...
diff --git a/Orange/tests/test_logistic_regression.py b/Orange/tests/test_logistic_regression.py --- a/Orange/tests/test_logistic_regression.py +++ b/Orange/tests/test_logistic_regression.py @@ -131,3 +131,23 @@ self.assertEqual(len(np.unique(t.Y)), 1) lr = sklearn.linear_model.LogisticRegression() ...
null
null
namanjain12/orange3_final:9b5494e26f407b75e79699c9d40be6df1d80a040
true
null
1
17
null
576
0
0.75
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0.6375
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80.37675
9,210
r2e_gym::train::5444
r2e_gym
train
5,444
aiohttp__56445fc9c043aa46fe9fd0a3dcf6da113c9b20ce
aiohttp
aio-libs/aiohttp
python
56445fc9c043aa46fe9fd0a3dcf6da113c9b20ce
**Title:** `add_route` Raises AssertionError Instead of ValueError for Invalid HTTP Methods **Description:** When attempting to add a route with an unsupported HTTP method, the `add_route` function raises an `AssertionError` instead of a `ValueError`. This behavior is misleading as `AssertionError` is generally used f...
diff --git a/aiohttp/web_urldispatcher.py b/aiohttp/web_urldispatcher.py --- a/aiohttp/web_urldispatcher.py +++ b/aiohttp/web_urldispatcher.py @@ -356,15 +356,17 @@ def add_route(self, method, path, handler, *, name=None, expect_handler=None): - assert callable(handler), handler ...
diff --git a/tests/test_urldispatch.py b/tests/test_urldispatch.py --- a/tests/test_urldispatch.py +++ b/tests/test_urldispatch.py @@ -550,3 +550,8 @@ with self.assertRaises(ValueError): handler = self.make_handler() self.router.add_route('GET', 'invalid_path', handler) + + def tes...
null
null
namanjain12/aiohttp_final:56445fc9c043aa46fe9fd0a3dcf6da113c9b20ce
true
null
1
6
null
796
0
0.75
1
0.6375
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0.152667
80.37675
9,211
r2e_gym::train::6119
r2e_gym
train
6,119
pillow__3c482b1b0b286aa5bc54c6a4547d92abe7b87e75
pillow
python-pillow/pillow
python
3c482b1b0b286aa5bc54c6a4547d92abe7b87e75
**Title**: TypeError When Accessing XMP Description Attributes **Description** When retrieving XMP metadata from an image, accessing the "Description" field as a dictionary results in a TypeError because it is actually a list of dictionaries. **Example Code** ```python from PIL import Image with Image.open("Tests/im...
diff --git a/src/PIL/Image.py b/src/PIL/Image.py --- a/src/PIL/Image.py +++ b/src/PIL/Image.py @@ -1334,10 +1334,10 @@ if marker == b"http://ns.adobe.com/xap/1.0/": root = xml.etree.ElementTree.fromstring(xmp_tags) for element in root.findall(".//"): - ...
diff --git a/Tests/test_image_getxmp.py b/Tests/test_image_getxmp.py --- a/Tests/test_image_getxmp.py +++ b/Tests/test_image_getxmp.py @@ -6,4 +6,4 @@ xmp = im.getxmp() assert isinstance(xmp, dict) - assert xmp["Description"][0]["Version"] == "10.4" + assert xmp["Description"]["Version...
null
null
namanjain12/pillow_final:3c482b1b0b286aa5bc54c6a4547d92abe7b87e75
true
null
1
8
null
755
0
0.75
1
0.6375
1
0.1525
80.37625
9,212
r2e_gym::train::5616
r2e_gym
train
5,616
scrapy__2c65066ad9e293630da2c594af06ad483abe800d
scrapy
scrapy/scrapy
python
2c65066ad9e293630da2c594af06ad483abe800d
**Title:** Copying CaseInsensitiveDict Raises KeyError Exception **Description:** When attempting to copy a `CaseInsensitiveDict`, a `KeyError` is raised unexpectedly. This prevents the dictionary from being copied successfully, which disrupts functionality that relies on creating duplicates of the dictionary. **Exam...
diff --git a/scrapy/utils/datatypes.py b/scrapy/utils/datatypes.py --- a/scrapy/utils/datatypes.py +++ b/scrapy/utils/datatypes.py @@ -94,8 +94,11 @@ def __setitem__(self, key: AnyStr, value: Any) -> None: normalized_key = self._normkey(key) - if normalized_key.lower() in self._keys: - ...
diff --git a/tests/test_utils_datatypes.py b/tests/test_utils_datatypes.py --- a/tests/test_utils_datatypes.py +++ b/tests/test_utils_datatypes.py @@ -187,9 +187,15 @@ def test_copy(self): h1 = self.dict_class({'header1': 'value'}) h2 = copy.copy(h1) + assert isinstance(h2, self.dict_class...
null
null
namanjain12/scrapy_final:2c65066ad9e293630da2c594af06ad483abe800d
true
null
1
7
null
772
0
0.75
1
0.6375
1
0.152
80.37475
9,213
r2e_gym::train::5441
r2e_gym
train
5,441
aiohttp__91751450c87e73d26d1464c6a61133e298b26ae2
aiohttp
aio-libs/aiohttp
python
91751450c87e73d26d1464c6a61133e298b26ae2
**Title:** Chunked encoding not properly restricted for HTTP/1.0 requests **Description:** When handling an HTTP/1.0 request, enabling chunked encoding does not raise an error as expected. This oversight can lead to compatibility issues with clients that do not support chunked responses. **Example Code:** ```python r...
diff --git a/aiohttp/web_reqrep.py b/aiohttp/web_reqrep.py --- a/aiohttp/web_reqrep.py +++ b/aiohttp/web_reqrep.py @@ -24,7 +24,7 @@ CIMultiDict, MultiDictProxy, MultiDict) -from .protocol import Response as ResponseImpl, HttpVersion10 +from .pr...
diff --git a/tests/test_web_response.py b/tests/test_web_response.py --- a/tests/test_web_response.py +++ b/tests/test_web_response.py @@ -18,8 +18,9 @@ def tearDown(self): self.loop.close() - def make_request(self, method, path, headers=CIMultiDict()): - message = RawRequestMessage(method, pa...
null
null
namanjain12/aiohttp_final:91751450c87e73d26d1464c6a61133e298b26ae2
true
null
2
11
null
692
0
0.75
1
0.6375
1
0.152
80.37475
9,214
r2e_gym::train::4429
r2e_gym
train
4,429
numpy__3071778e37112377b592b180769f0a44496dc2da
numpy
numpy/numpy
python
3071778e37112377b592b180769f0a44496dc2da
**Title:** Missing `bits` Attribute in `np.finfo` Causes AttributeError **Description:** When attempting to access the `bits` attribute of a `finfo` object, an `AttributeError` is raised because the attribute does not exist. **Example Code:** ```python import numpy as np info = np.finfo(np.float32) print(info.bits) ...
diff --git a/numpy/core/getlimits.py b/numpy/core/getlimits.py --- a/numpy/core/getlimits.py +++ b/numpy/core/getlimits.py @@ -30,6 +30,8 @@ Attributes ---------- + bits : int + The number of bits occupied by the type. eps : float The smallest representable positive number such that ...
diff --git a/numpy/core/tests/test_getlimits.py b/numpy/core/tests/test_getlimits.py --- a/numpy/core/tests/test_getlimits.py +++ b/numpy/core/tests/test_getlimits.py @@ -42,6 +42,19 @@ ftype2 = finfo(longdouble) assert_equal(id(ftype), id(ftype2)) +class TestFinfo(TestCase): + def test_basic(sel...
null
null
namanjain12/numpy_final:3071778e37112377b592b180769f0a44496dc2da
true
null
1
17
null
568
0
0.75
1
0.6375
1
0.151333
80.37275
9,215
r2e_gym::train::4147
r2e_gym
train
4,147
numpy__d51b538ba80d36841cc57911d77ea61cd1d3fb25
numpy
numpy/numpy
python
d51b538ba80d36841cc57911d77ea61cd1d3fb25
**Title:** TypeError when using `divmod` with `ArrayLike` objects **Description:** When using the `divmod` function with an `ArrayLike` instance and an integer, a `TypeError` is raised, preventing the operation from completing successfully. **Example Code:** ```python import numpy as np array_like = ArrayLike(np.arr...
diff --git a/numpy/lib/mixins.py b/numpy/lib/mixins.py --- a/numpy/lib/mixins.py +++ b/numpy/lib/mixins.py @@ -70,8 +70,7 @@ implement. This class does not yet implement the special operators corresponding - to ``divmod`` or ``matmul`` (``@``), because these operation do not yet - have corresponding N...
diff --git a/numpy/lib/tests/test_mixins.py b/numpy/lib/tests/test_mixins.py --- a/numpy/lib/tests/test_mixins.py +++ b/numpy/lib/tests/test_mixins.py @@ -56,11 +56,47 @@ return '%s(%r)' % (type(self).__name__, self.value) +def wrap_array_like(result): + if type(result) is tuple: + return tuple(A...
null
null
namanjain12/numpy_final:d51b538ba80d36841cc57911d77ea61cd1d3fb25
true
null
1
8
null
747
0
0.75
1
0.6375
1
0.151167
80.37225
9,216
r2e_gym::train::6334
r2e_gym
train
6,334
pillow__e817ed0d3eb838e63836dd5f976a007a9775ce89
pillow
python-pillow/pillow
python
e817ed0d3eb838e63836dd5f976a007a9775ce89
**Title:** `ContainerIO` Methods Mixing `str` and `bytes` Causes TypeError **Description:** When using `ContainerIO` to handle binary data, attempting to read from the container results in a `TypeError`. This issue occurs because some methods return `str` instead of `bytes`, leading to type mismatches during operation...
diff --git a/src/PIL/ContainerIO.py b/src/PIL/ContainerIO.py --- a/src/PIL/ContainerIO.py +++ b/src/PIL/ContainerIO.py @@ -82,7 +82,7 @@ else: n = self.length - self.pos if not n: # EOF - return "" + return b"" self.pos = self.pos + n return self.f...
diff --git a/Tests/test_file_container.py b/Tests/test_file_container.py --- a/Tests/test_file_container.py +++ b/Tests/test_file_container.py @@ -20,7 +20,7 @@ def test_seek_mode_0(): # Arrange mode = 0 - with open(TEST_FILE) as fh: + with open(TEST_FILE, "rb") as fh: container = ContainerIO....
null
null
namanjain12/pillow_final:e817ed0d3eb838e63836dd5f976a007a9775ce89
true
null
1
6
null
785
0
0.75
1
0.6375
1
0.150833
80.37125
9,217
r2e_gym::train::315
r2e_gym
train
315
orange3__fd0c090a76bd2e4baba87e2df253a480b85660c7
orange3
biolab/orange3
python
fd0c090a76bd2e4baba87e2df253a480b85660c7
**Title:** Removing Unused Values Results in NaN Mapping for Target Variable **Description:** When attempting to remove unused values from a categorical variable in the dataset, the target variable `Y` unexpectedly contains `NaN` values instead of properly mapped integers. **Example:** ```python housing = Table("hous...
diff --git a/Orange/preprocess/remove.py b/Orange/preprocess/remove.py --- a/Orange/preprocess/remove.py +++ b/Orange/preprocess/remove.py @@ -2,7 +2,7 @@ import numpy as np -from Orange.data import Domain, DiscreteVariable, Table +from Orange.data import Domain, DiscreteVariable from Orange.preprocess.transforma...
diff --git a/Orange/tests/test_remove.py b/Orange/tests/test_remove.py --- a/Orange/tests/test_remove.py +++ b/Orange/tests/test_remove.py @@ -6,7 +6,7 @@ import numpy as np from Orange.data import Table -from Orange.preprocess import Remove +from Orange.preprocess import Remove, discretize from Orange.tests impor...
null
null
namanjain12/orange3_final:fd0c090a76bd2e4baba87e2df253a480b85660c7
true
null
1
7
null
762
0
0.75
1
0.6375
1
0.150333
80.36975
9,218
r2e_gym::train::5096
r2e_gym
train
5,096
pyramid__f10d1e8f9e7a8d65218b9fb09efe3b6fa9511bdd
pyramid
pylons/pyramid
python
f10d1e8f9e7a8d65218b9fb09efe3b6fa9511bdd
**Title:** ConfigurationError Raised When Adding NotFound View Without Providing a View Callable **Description:** When configuring a notfound view without specifying a view callable, the system raises a `ConfigurationError` instead of using the default exception response view as expected. **Example Code:** ```python ...
diff --git a/pyramid/config/views.py b/pyramid/config/views.py --- a/pyramid/config/views.py +++ b/pyramid/config/views.py @@ -53,6 +53,7 @@ from pyramid.httpexceptions import ( HTTPForbidden, HTTPNotFound, + default_exceptionresponse_view, ) from pyramid.registry import ( @@ -1671,6 +1672,9 @@ ...
diff --git a/pyramid/tests/test_config/test_views.py b/pyramid/tests/test_config/test_views.py --- a/pyramid/tests/test_config/test_views.py +++ b/pyramid/tests/test_config/test_views.py @@ -1859,6 +1859,21 @@ request_iface=IRequest) result = view(None, request) s...
null
null
namanjain12/pyramid_final:f10d1e8f9e7a8d65218b9fb09efe3b6fa9511bdd
true
null
1
7
null
760
0
0.75
1
0.6375
1
0.15
80.36875
9,219
swe_bench::test::15
swe_bench
test
15
astropy__astropy-13132
astropy/astropy
astropy/astropy
python
3a0cd2d8cd7b459cdc1e1b97a14f3040ccc1fffc
Add __array_func__ for astropy.time.Time ### Description xref https://github.com/astropy/astropy/issues/8610. This provides some numpy array functions for `Time` objects. Most notably, one can now do the following without an errror(!): ```python from astropy.time import Time, TimeDelta import numpy as np t0 = Time('...
👋 Thank you for your draft pull request! Do you know that you can use `[ci skip]` or `[skip ci]` in your commit messages to skip running continuous integration tests until you are ready? I think this is good for review now. Somewhat limited in scope to just `linspace`, but once the structure of implementing the numpy ...
diff --git a/astropy/time/core.py b/astropy/time/core.py --- a/astropy/time/core.py +++ b/astropy/time/core.py @@ -31,6 +31,7 @@ # Import TimeFromEpoch to avoid breaking code that followed the old example of # making a custom timescale in the documentation. from .formats import TimeFromEpoch # noqa +from .time_help...
diff --git a/astropy/time/tests/test_basic.py b/astropy/time/tests/test_basic.py --- a/astropy/time/tests/test_basic.py +++ b/astropy/time/tests/test_basic.py @@ -2317,3 +2317,65 @@ def test_location_init_fail(): with pytest.raises(ValueError, match='cannot concatenate times unless all loca...
["astropy/time/tests/test_basic.py::test_linspace", "astropy/time/tests/test_basic.py::test_linspace_steps", "astropy/time/tests/test_basic.py::test_linspace_fmts"]
["astropy/time/tests/test_basic.py::TestBasic::test_different_dimensions", "astropy/time/tests/test_basic.py::TestBasic::test_empty_value[jd]", "astropy/time/tests/test_basic.py::TestBasic::test_empty_value[mjd]", "astropy/time/tests/test_basic.py::TestBasic::test_empty_value[decimalyear]", "astropy/time/tests/test_bas...
null
true
2022-04-21T01:37:30Z
3
61
3
2,196
0.03125
0.8
1
0.55
1
0.569333
80.368547
9,220
r2e_gym::train::5664
r2e_gym
train
5,664
scrapy__770a501fb32b7582acaa5900ac2f41ea46a321cd
scrapy
scrapy/scrapy
python
770a501fb32b7582acaa5900ac2f41ea46a321cd
**Title:** TypeError When Assigning to `kwargs` After Copying a Request **Description:** When copying a `Request` object and attempting to assign a value to its `kwargs`, a `TypeError` is raised because `kwargs` is `None`. This issue prevents proper configuration of the copied request's keyword arguments. **Example C...
diff --git a/scrapy/http/request/__init__.py b/scrapy/http/request/__init__.py --- a/scrapy/http/request/__init__.py +++ b/scrapy/http/request/__init__.py @@ -40,8 +40,14 @@ self.dont_filter = dont_filter self._meta = dict(meta) if meta else None + self._kwargs = dict(kwargs) if kwargs else N...
diff --git a/tests/test_http_request.py b/tests/test_http_request.py --- a/tests/test_http_request.py +++ b/tests/test_http_request.py @@ -177,6 +177,7 @@ r1 = self.request_class("http://www.example.com", flags=['f1', 'f2'], callback=somecallback, errback=somecallback) ...
null
null
namanjain12/scrapy_final:770a501fb32b7582acaa5900ac2f41ea46a321cd
true
null
1
8
null
739
0
0.75
1
0.6375
1
0.149833
80.36825
9,221
r2e_gym::train::4831
r2e_gym
train
4,831
numpy__a67d9ad6b0934f533f832cd4cc13ccb7dfd69c9e
numpy
numpy/numpy
python
a67d9ad6b0934f533f832cd4cc13ccb7dfd69c9e
**Title:** `np.errstate` Allows Sequential Multiple Entries, Causing Potential Thread-Safety Issues **Description:** When using the `np.errstate` context manager, entering it more than once in a row does not raise an error, which can lead to thread-safety problems. **Example Code:** ```python import numpy as np errs...
diff --git a/doc/release/upcoming_changes/23936.change.rst b/doc/release/upcoming_changes/23936.change.rst --- a/doc/release/upcoming_changes/23936.change.rst +++ b/doc/release/upcoming_changes/23936.change.rst @@ -1,5 +1,4 @@ * Being fully context and thread-safe, ``np.errstate`` can only - be entered once now. It ...
diff --git a/numpy/core/tests/test_errstate.py b/numpy/core/tests/test_errstate.py --- a/numpy/core/tests/test_errstate.py +++ b/numpy/core/tests/test_errstate.py @@ -71,6 +71,18 @@ foo() + def test_errstate_enter_once(self): + errstate = np.errstate(invalid="warn") + with errs...
null
null
namanjain12/numpy_final:a67d9ad6b0934f533f832cd4cc13ccb7dfd69c9e
true
null
2
7
null
758
0
0.75
1
0.6375
1
0.149667
80.36775
9,222
r2e_gym::train::4102
r2e_gym
train
4,102
coveragepy__28c29a72242e76dab658fe07f104961889c85c12
coveragepy
nedbat/coveragepy
python
28c29a72242e76dab658fe07f104961889c85c12
**Title:** AttributeError: 'PYBEHAVIOR' has no attribute 'bug39114' during test execution **Description:** When running the test suite, several tests attempt to access the `bug39114` attribute of the `PYBEHAVIOR` object. However, this attribute is not defined, resulting in an `AttributeError`. **Example Buggy Code:**...
diff --git a/appveyor.yml b/appveyor.yml --- a/appveyor.yml +++ b/appveyor.yml @@ -90,14 +90,14 @@ - JOB: "3.9 32-bit" TOXENV: "py39" PYTHON: "C:\\Python39" - PYTHON_VERSION: "3.9.0a1" + PYTHON_VERSION: "3.9.0a2" PYTHON_ARCH: "32" COVERAGE_NO_PYTRACER: "1" - JOB: "3.9 6...
diff --git a/tests/coveragetest.py b/tests/coveragetest.py --- a/tests/coveragetest.py +++ b/tests/coveragetest.py @@ -15,6 +15,7 @@ import sys import types +import pytest from unittest_mixins import ( EnvironmentAwareMixin, StdStreamCapturingMixin, TempDirMixin, DelayedAssertionMixin, @@ -98,6 +99,10 @@...
null
null
namanjain12/coveragepy_final:28c29a72242e76dab658fe07f104961889c85c12
true
null
2
8
null
738
0
0.75
1
0.6375
1
0.149667
80.36775
9,223
r2e_gym::train::6637
r2e_gym
train
6,637
pillow__c50503a14d5b04dd42030adb77b05732e800b153
pillow
python-pillow/pillow
python
c50503a14d5b04dd42030adb77b05732e800b153
**Title:** `load_byte` method returns a tuple instead of a byte string when `legacy_api` is disabled **Description:** When using the `load_byte` method with `legacy_api` set to `False`, the method incorrectly returns a tuple of integers instead of a single byte string. This discrepancy causes tests that expect a byte ...
diff --git a/PIL/TiffImagePlugin.py b/PIL/TiffImagePlugin.py --- a/PIL/TiffImagePlugin.py +++ b/PIL/TiffImagePlugin.py @@ -544,8 +544,7 @@ self.tagtype[tag] = 2 if self.tagtype[tag] == 7 and bytes is not str: - values = [value.encode("ascii", 'replace') if isinstance(v...
diff --git a/Tests/test_file_tiff.py b/Tests/test_file_tiff.py --- a/Tests/test_file_tiff.py +++ b/Tests/test_file_tiff.py @@ -287,7 +287,7 @@ ifd = TiffImagePlugin.ImageFileDirectory_v2() data = b"abc" ret = ifd.load_byte(data, legacy_api) - self.assertEqual(ret, b"abc...
null
null
namanjain12/pillow_final:c50503a14d5b04dd42030adb77b05732e800b153
true
null
1
6
null
772
0
0.75
1
0.6375
1
0.148667
80.36475
9,224
r2e_gym::train::6471
r2e_gym
train
6,471
pillow__05fe86654cb079b5b77d077e053bf5ee6d2b6f5b
pillow
python-pillow/pillow
python
05fe86654cb079b5b77d077e053bf5ee6d2b6f5b
**Title:** AttributeError: '_repr_png' method missing for Image objects in IPython **Description:** When attempting to display `Image` objects within an IPython environment, calling the `_repr_png` method results in an `AttributeError`. This prevents the image from being rendered correctly in the output cell. **Examp...
diff --git a/PIL/Image.py b/PIL/Image.py --- a/PIL/Image.py +++ b/PIL/Image.py @@ -597,6 +597,16 @@ self.mode, self.size[0], self.size[1], id(self) ) + + def _repr_png(self): + """ iPython display hook support + + :returns: png version of the image as byte...
diff --git a/Tests/test_file_png.py b/Tests/test_file_png.py --- a/Tests/test_file_png.py +++ b/Tests/test_file_png.py @@ -374,6 +374,14 @@ im = roundtrip(im) self.assertEqual(im.info['icc_profile'], expected_icc) + def test_repr_png(self): + im = hopper() + + repr_png = Image.open(...
null
null
namanjain12/pillow_final:05fe86654cb079b5b77d077e053bf5ee6d2b6f5b
true
null
1
10
null
688
0
0.75
1
0.6375
1
0.148
80.36275
9,225
r2e_gym::train::6138
r2e_gym
train
6,138
pillow__04052e85c949bfd2fd67297ed8c43960b4abbf3a
pillow
python-pillow/pillow
python
04052e85c949bfd2fd67297ed8c43960b4abbf3a
**Title:** Unable to Save Spider Image to File-like Object Without Filename **Description:** When attempting to save a Spider format image using a file-like object, the operation fails because the system tries to open a filename for writing. This prevents saving images to in-memory file-like objects such as `Temporary...
diff --git a/PIL/SpiderImagePlugin.py b/PIL/SpiderImagePlugin.py --- a/PIL/SpiderImagePlugin.py +++ b/PIL/SpiderImagePlugin.py @@ -267,16 +267,10 @@ raise IOError("Error creating Spider header") # write the SPIDER header - try: - fp = open(filename, 'wb') - except: - raise IOError("U...
diff --git a/Tests/test_file_spider.py b/Tests/test_file_spider.py --- a/Tests/test_file_spider.py +++ b/Tests/test_file_spider.py @@ -3,6 +3,8 @@ from PIL import Image from PIL import ImageSequence from PIL import SpiderImagePlugin + +import tempfile TEST_FILE = "Tests/images/hopper.spider" @@ -29,6 +31,21 @@ ...
null
null
namanjain12/pillow_final:04052e85c949bfd2fd67297ed8c43960b4abbf3a
true
null
1
6
null
764
0
0.75
1
0.6375
1
0.147333
80.36075
9,226
r2e_gym::train::332
r2e_gym
train
332
orange3__d545b386cf695819000b5cdb412eb4021b3bb3a8
orange3
biolab/orange3
python
d545b386cf695819000b5cdb412eb4021b3bb3a8
**Title**: Unable to Unlock Derived Table Subclasses Loaded from File or URL **Description**: When using a subclass of `Table` to load data from a file or URL, attempting to unlock the table results in a `ValueError`. This error indicates that a part of the table is a view into another table and cannot be unlocked. *...
diff --git a/Orange/data/table.py b/Orange/data/table.py --- a/Orange/data/table.py +++ b/Orange/data/table.py @@ -1077,11 +1077,6 @@ reader.select_sheet(sheet) data = reader.read() - # Readers return plain table. Make sure to cast it to appropriate - # (subclass) type - if cls ...
diff --git a/Orange/data/tests/test_table.py b/Orange/data/tests/test_table.py --- a/Orange/data/tests/test_table.py +++ b/Orange/data/tests/test_table.py @@ -384,6 +384,16 @@ self.assertTrue(unpickled.is_copy()) with unpickled.unlocked(): unpickled.X[0, 0] = 42 + + @staticmethod + ...
null
null
namanjain12/orange3_final:d545b386cf695819000b5cdb412eb4021b3bb3a8
true
null
1
7
null
741
0
0.75
1
0.6375
1
0.146833
80.35925
9,227
r2e_gym::train::6240
r2e_gym
train
6,240
pillow__e16ab0ad2ead98205143d06940f79a45300b4f33
pillow
python-pillow/pillow
python
e16ab0ad2ead98205143d06940f79a45300b4f33
**Title:** `getchannel` Method Raises `TypeError` When Using String Channel Names **Description** When attempting to retrieve an image channel using its string name (e.g., `'R'`, `'G'`, `'B'`), the `getchannel` method raises a `TypeError` instead of correctly processing the string input. **Example Buggy Code:** ```py...
diff --git a/PIL/Image.py b/PIL/Image.py --- a/PIL/Image.py +++ b/PIL/Image.py @@ -1975,9 +1975,12 @@ """ self.load() - if isStringType(channel) and len(channel) == 1: - if channel in self.im.mode: - channel = self.im.mode.index(channel) + if isStringType(chan...
diff --git a/Tests/test_image.py b/Tests/test_image.py --- a/Tests/test_image.py +++ b/Tests/test_image.py @@ -145,14 +145,28 @@ self.assertEqual(im.size[1], orig_size[1] + 2*ymargin) def test_getbands(self): - # Arrange - im = hopper() - - # Act - bands = im.getbands() - - ...
null
null
namanjain12/pillow_final:e16ab0ad2ead98205143d06940f79a45300b4f33
true
null
1
9
null
695
0
0.75
1
0.6375
1
0.145833
80.35625
9,228
r2e_gym::train::4177
r2e_gym
train
4,177
numpy__530c3eb948c50d24ce09232ec65a0496498ce74e
numpy
numpy/numpy
python
530c3eb948c50d24ce09232ec65a0496498ce74e
**Title:** `numpy.ma.round` Raises AttributeError on Zero-Dimensional Arrays **Description:** When rounding a zero-dimensional masked array, an `AttributeError` is raised because the resulting scalar does not have a `_mask` attribute. **Example Code:** ```python import numpy as np from numpy.ma import array, masked ...
diff --git a/numpy/ma/core.py b/numpy/ma/core.py --- a/numpy/ma/core.py +++ b/numpy/ma/core.py @@ -5107,8 +5107,12 @@ """ result = self._data.round(decimals=decimals, out=out).view(type(self)) - result._mask = self._mask - result._update_from(self) + if result.ndim > 0: + ...
diff --git a/numpy/ma/tests/test_core.py b/numpy/ma/tests/test_core.py --- a/numpy/ma/tests/test_core.py +++ b/numpy/ma/tests/test_core.py @@ -3443,6 +3443,31 @@ result = xm.round(decimals=2, out=output) self.assertTrue(result is output) + def test_round_with_scalar(self): + # Testing roun...
null
null
namanjain12/numpy_final:530c3eb948c50d24ce09232ec65a0496498ce74e
true
null
1
12
null
631
0
0.75
1
0.6375
1
0.145167
80.35425
9,229
swe_bench::dev::181
swe_bench
dev
181
sqlfluff__sqlfluff-2336
sqlfluff/sqlfluff
sqlfluff/sqlfluff
python
37a993f7ad841ab3035d1db5ce6525f2e5584fd5
L026: Rule incorrectly flag column does not exist in `FROM` clause in an UPDATE statement. ## Expected Behaviour L026 should not fail when a subquery in an UPDATE statement references a column from the UPDATE target. ## Observed Behaviour L026 failed due to reference was not found in the FROM clause with the followi...
diff --git a/src/sqlfluff/core/rules/analysis/select.py b/src/sqlfluff/core/rules/analysis/select.py --- a/src/sqlfluff/core/rules/analysis/select.py +++ b/src/sqlfluff/core/rules/analysis/select.py @@ -124,7 +124,7 @@ def _has_value_table_function(table_expr, dialect): # We need the dialect to get the value t...
diff --git a/test/core/rules/reference_test.py b/test/core/rules/reference_test.py new file mode 100644 --- /dev/null +++ b/test/core/rules/reference_test.py @@ -0,0 +1,72 @@ +"""Test components for working with object and table references.""" +import pytest + +from sqlfluff.core.rules import reference + + +@pytest.mar...
["test/core/rules/reference_test.py::test_object_ref_matches_table[possible_references0-targets0-True]", "test/core/rules/reference_test.py::test_object_ref_matches_table[possible_references1-targets1-True]", "test/core/rules/reference_test.py::test_object_ref_matches_table[possible_references2-targets2-False]", "test/...
[]
null
true
2022-01-17T21:35:10Z
6
273
14
1,072
0
0.8
1
0.85
0.6375
0.678667
80.351625
9,230
r2e_gym::train::5785
r2e_gym
train
5,785
tornado__80df78ac77e020ce23ac16c81368906c75867558
tornado
tornadoweb/tornado
python
80df78ac77e020ce23ac16c81368906c75867558
**Title:** OptionParser Does Not Support Item Assignment, Raising TypeError **Description:** When trying to assign a value to an option using the item assignment syntax, a `TypeError` is raised because the `OptionParser` object does not support item assignment. **Example Code:** ```python options = OptionParser() opt...
diff --git a/tornado/options.py b/tornado/options.py --- a/tornado/options.py +++ b/tornado/options.py @@ -132,8 +132,10 @@ return name in self._options def __getitem__(self, name): - name = self._normalize_name(name) - return self._options[name].value() + return self.__getattr__(na...
diff --git a/tornado/test/options_test.py b/tornado/test/options_test.py --- a/tornado/test/options_test.py +++ b/tornado/test/options_test.py @@ -130,6 +130,12 @@ def test_getitem(self): options = self._sample_options() self.assertEqual(1, options['a']) + + def test_setitem(self): + op...
null
null
namanjain12/tornado_final:80df78ac77e020ce23ac16c81368906c75867558
true
null
1
6
null
742
0
0.75
1
0.6375
1
0.143667
80.34975
9,231
swe_bench::test::1586
swe_bench
test
1,586
scikit-learn__scikit-learn-13241
scikit-learn/scikit-learn
scikit-learn/scikit-learn
python
f8b108d0c6f2f82b2dc4e32a6793f9d9ac9cf2f4
Differences among the results of KernelPCA with rbf kernel Hi there, I met with a problem: #### Description When I run KernelPCA for dimension reduction for the same datasets, the results are different in signs. #### Steps/Code to Reproduce Just to reduce the dimension to 7 with rbf kernel: pca = KernelPCA(n_componen...
Looks like this sign flip thing was already noticed as part of https://github.com/scikit-learn/scikit-learn/issues/5970. Using `sklearn.utils.svd_flip` may be the fix to have a deterministic sign. Can you provide a stand-alone snippet to reproduce the problem ? Please read https://stackoverflow.com/help/mcve. Sta...
diff --git a/sklearn/decomposition/kernel_pca.py b/sklearn/decomposition/kernel_pca.py --- a/sklearn/decomposition/kernel_pca.py +++ b/sklearn/decomposition/kernel_pca.py @@ -8,6 +8,7 @@ from scipy.sparse.linalg import eigsh from ..utils import check_random_state +from ..utils.extmath import svd_flip from ..utils....
diff --git a/sklearn/decomposition/tests/test_kernel_pca.py b/sklearn/decomposition/tests/test_kernel_pca.py --- a/sklearn/decomposition/tests/test_kernel_pca.py +++ b/sklearn/decomposition/tests/test_kernel_pca.py @@ -4,7 +4,7 @@ from sklearn.utils.testing import (assert_array_almost_equal, assert_less, ...
["sklearn/decomposition/tests/test_kernel_pca.py::test_kernel_pca_deterministic_output"]
["sklearn/decomposition/tests/test_kernel_pca.py::test_kernel_pca", "sklearn/decomposition/tests/test_kernel_pca.py::test_kernel_pca_invalid_parameters", "sklearn/decomposition/tests/test_kernel_pca.py::test_kernel_pca_consistent_transform", "sklearn/decomposition/tests/test_kernel_pca.py::test_kernel_pca_sparse", "skl...
null
true
2019-02-25T11:27:41Z
1
5
1
777
0
0.8
1
0.7
0.8
0.146167
80.3385
9,232
swe_bench::test::1555
swe_bench
test
1,555
scikit-learn__scikit-learn-12625
scikit-learn/scikit-learn
scikit-learn/scikit-learn
python
ac327c5ad66fa3d4eb607d007e3684dec872d49a
TypeError: "iteration over a 0-d array" when trying to preprocessing.scale a pandas.Series #### Description When trying to call `preprocessing.scale` on a `pandas.Series` instance, an error is thrown with scikit-learn version 0.20.0. Version 0.19.1. works just fine. The [documentation](https://scikit-learn.org/stable...
Minimal script to reproduce: ``` import pandas as pd from sklearn.utils.validation import check_array check_array(pd.Series([1, 2, 3]), ensure_2d=False, warn_on_dtype=True) ``` Related PR #10949 Thanks for reporting. Yeah would be good to get this into 0.20.1, hrm... Heading to bed, seems that an easy solution w...
diff --git a/sklearn/utils/validation.py b/sklearn/utils/validation.py --- a/sklearn/utils/validation.py +++ b/sklearn/utils/validation.py @@ -477,7 +477,7 @@ def check_array(array, accept_sparse=False, accept_large_sparse=True, # check if the object contains several dtypes (typically a pandas # DataFrame), a...
diff --git a/sklearn/utils/tests/test_validation.py b/sklearn/utils/tests/test_validation.py --- a/sklearn/utils/tests/test_validation.py +++ b/sklearn/utils/tests/test_validation.py @@ -694,6 +694,14 @@ def test_suppress_validation(): assert_raises(ValueError, assert_all_finite, X) +def test_check_array_serie...
["sklearn/utils/tests/test_validation.py::test_check_array_series"]
["sklearn/utils/tests/test_validation.py::test_as_float_array", "sklearn/utils/tests/test_validation.py::test_as_float_array_nan[X0]", "sklearn/utils/tests/test_validation.py::test_as_float_array_nan[X1]", "sklearn/utils/tests/test_validation.py::test_np_matrix", "sklearn/utils/tests/test_validation.py::test_memmap", "...
null
true
2018-11-20T16:10:31Z
1
2
1
2,735
0
0.8
1
1
0.4
0.4625
80.3375
9,233
swe_bench::test::57
swe_bench
test
57
astropy__astropy-14484
astropy/astropy
astropy/astropy
python
09e54670e4a46ed510e32d8206e4853920684952
New Quantity warning starting with yesterday's numpy-dev ### Description Starting today, `photutils` CI tests with `astropy-dev` and `numpy-dev` started failing due a new warning. I've extracted a MWE showing the warning: ```python import astropy.units as u import pytest from numpy.testing import assert_equal a = [...
We saw this downstream in Jdaviz too. cc @bmorris3
diff --git a/astropy/units/quantity_helper/function_helpers.py b/astropy/units/quantity_helper/function_helpers.py --- a/astropy/units/quantity_helper/function_helpers.py +++ b/astropy/units/quantity_helper/function_helpers.py @@ -75,9 +75,10 @@ np.put, np.fill_diagonal, np.tile, np.repeat, np.split, np.array...
diff --git a/astropy/units/tests/test_quantity_non_ufuncs.py b/astropy/units/tests/test_quantity_non_ufuncs.py --- a/astropy/units/tests/test_quantity_non_ufuncs.py +++ b/astropy/units/tests/test_quantity_non_ufuncs.py @@ -17,7 +17,7 @@ TBD_FUNCTIONS, UNSUPPORTED_FUNCTIONS, ) -from astropy.utils.compat impor...
["astropy/units/tests/test_quantity_non_ufuncs.py::TestUfuncReductions::test_max", "astropy/units/tests/test_quantity_non_ufuncs.py::TestUfuncReductions::test_min", "astropy/units/tests/test_quantity_non_ufuncs.py::TestFunctionHelpersCompleteness::test_all_included"]
["astropy/units/tests/test_quantity_non_ufuncs.py::TestShapeInformation::test_shape", "astropy/units/tests/test_quantity_non_ufuncs.py::TestShapeInformation::test_size", "astropy/units/tests/test_quantity_non_ufuncs.py::TestShapeInformation::test_ndim", "astropy/units/tests/test_quantity_non_ufuncs.py::TestShapeManipul...
null
true
2023-03-02T18:48:46Z
1
3
3
776
0
0.8
1
0.7
0.8
0.139333
80.318
9,234
swe_bench::dev::76
swe_bench
dev
76
pydicom__pydicom-1048
pydicom/pydicom
pydicom/pydicom
python
00c248441ffb8b7d46c6d855b723e696a8f5aada
dcmread cannot handle pathlib.Path objects **Describe the bug** The `dcmread()` currently fails when passed an instance of `pathlib.Path`. The problem is the following line: https://github.com/pydicom/pydicom/blob/8b0bbaf92d7a8218ceb94dedbee3a0463c5123e3/pydicom/filereader.py#L832 **Expected behavior** `dcmread()` sho...
Good point. We could use `os.fspath`, but that is only available from Python 3.6 onwards, so we probably have to add a respective check... The `save_as()` method of `Dataset` has the same issue. Yes, I noticed. I'm on it. Yep. I actually started writing code for it at one point, but got side-tracked with other issues....
diff --git a/pydicom/data/data_manager.py b/pydicom/data/data_manager.py --- a/pydicom/data/data_manager.py +++ b/pydicom/data/data_manager.py @@ -5,6 +5,8 @@ import os from os.path import abspath, dirname, join +from pydicom.fileutil import path_from_pathlike + DATA_ROOT = abspath(dirname(__file__)) @@ -13,7 ...
diff --git a/pydicom/tests/test_filereader.py b/pydicom/tests/test_filereader.py --- a/pydicom/tests/test_filereader.py +++ b/pydicom/tests/test_filereader.py @@ -7,6 +7,7 @@ from io import BytesIO import os import shutil +from pathlib import Path from struct import unpack import sys import tempfile @@ -114,6 +11...
["pydicom/tests/test_filereader.py::TestReader::test_empty_numbers_tag", "pydicom/tests/test_filereader.py::TestReader::test_UTF8_filename", "pydicom/tests/test_filereader.py::TestReader::test_pathlib_path_filename", "pydicom/tests/test_filereader.py::TestReader::test_RTPlan", "pydicom/tests/test_filereader.py::TestRea...
[]
null
true
2020-02-09T18:36:33Z
6
57
258
633
0
0.8
0.75
0.85
0.85
0.2955
80.3115
9,235
r2e_gym::train::4032
r2e_gym
train
4,032
coveragepy__610a56fb7ef43614be8752c4561c6c0f118db021
coveragepy
nedbat/coveragepy
python
610a56fb7ef43614be8752c4561c6c0f118db021
**Title:** IndexError Occurs When Generating lcov Report for Certain Jinja2 Files **Description:** When generating an lcov report for Jinja2 template files, an `IndexError` is raised, causing the report generation to fail unexpectedly. **Example Code:** ```python import coverage cov = coverage.Coverage() cov.load() ...
diff --git a/CHANGES.rst b/CHANGES.rst --- a/CHANGES.rst +++ b/CHANGES.rst @@ -20,9 +20,15 @@ Unreleased ---------- +- Fix: the ``lcov`` command could raise an IndexError exception if a file is + translated to Python but then executed under its own name. Jinja2 does this + when rendering templates. Fixes `issue...
diff --git a/tests/test_report_common.py b/tests/test_report_common.py --- a/tests/test_report_common.py +++ b/tests/test_report_common.py @@ -8,6 +8,7 @@ import textwrap import coverage +from coverage import env from coverage.files import abs_file from tests.coveragetest import CoverageTest @@ -156,3 +157,127 ...
null
null
namanjain12/coveragepy_final:610a56fb7ef43614be8752c4561c6c0f118db021
true
null
2
8
null
605
0
0.75
1
0.6375
1
0.1275
80.30125
9,236
r2e_gym::train::5046
r2e_gym
train
5,046
datalad__965607ef83f9c3c7f731ce12b990d4dc94cdce2e
datalad
datalad/datalad
python
965607ef83f9c3c7f731ce12b990d4dc94cdce2e
**Title:** `_path_` function fails when called with multiple arguments **Description:** When attempting to handle multiple path segments, the `_path_` function raises a `TypeError`. This prevents the function from correctly joining multiple path parts as intended. **Example Code:** ```python path = _path_('a/b/c', 'd...
diff --git a/datalad/utils.py b/datalad/utils.py --- a/datalad/utils.py +++ b/datalad/utils.py @@ -875,12 +875,12 @@ pass -def _path_(p): +def _path_(*p): """Given a path in POSIX" notation, regenerate one in native to the env one""" if on_windows: - return opj(p.split('/')) + ...
diff --git a/datalad/tests/test_utils.py b/datalad/tests/test_utils.py --- a/datalad/tests/test_utils.py +++ b/datalad/tests/test_utils.py @@ -420,3 +420,4 @@ else: p = 'a/b/c' assert(_path_(p) is p) # nothing is done to it whatsoever + eq_(_path_(p, 'd'), 'a/b/c/d')
null
null
namanjain12/datalad_final:965607ef83f9c3c7f731ce12b990d4dc94cdce2e
true
null
1
6
null
609
0
0.75
1
0.6375
1
0.1215
80.28325
9,237
r2e_gym::train::4971
r2e_gym
train
4,971
datalad__b0cfdbb1b24a0a36fa48be6f7a2c68ed88d029a9
datalad
datalad/datalad
python
b0cfdbb1b24a0a36fa48be6f7a2c68ed88d029a9
**Title:** `_get_size_from_perc_complete` crashes when percentage is missing **Description:** When the percentage value is not provided, the `_get_size_from_perc_complete` function fails instead of handling the missing input gracefully. **Example Code:** ```python result = _get_size_from_perc_complete(1, '') ``` **E...
diff --git a/datalad/support/annexrepo.py b/datalad/support/annexrepo.py --- a/datalad/support/annexrepo.py +++ b/datalad/support/annexrepo.py @@ -2112,8 +2112,8 @@ % str(out_json)) # Make the output's structure match bcmd's. out_json = out_json[0] - # Don't cap...
diff --git a/datalad/support/tests/test_annexrepo.py b/datalad/support/tests/test_annexrepo.py --- a/datalad/support/tests/test_annexrepo.py +++ b/datalad/support/tests/test_annexrepo.py @@ -2358,6 +2358,8 @@ eq_(f(0, '0'), 0) eq_(f(100, '0'), 0) # we do not know better eq_(f(1, '1'), 100) + # with n...
null
null
namanjain12/datalad_final:b0cfdbb1b24a0a36fa48be6f7a2c68ed88d029a9
true
null
1
10
null
513
0
0.75
1
0.6375
1
0.118833
80.27525
9,238
swe_bench::test::1597
swe_bench
test
1,597
scikit-learn__scikit-learn-13436
scikit-learn/scikit-learn
scikit-learn/scikit-learn
python
77b73d63d05bc198ba89193582aee93cae1f69a4
Confusing pretty print repr for nested Pipeline Taking the examples from the docs (https://scikit-learn.org/dev/auto_examples/compose/plot_column_transformer_mixed_types.html#sphx-glr-auto-examples-compose-plot-column-transformer-mixed-types-py) that involves some nested pipelines in columntransformer in pipeline ```p...
diff --git a/sklearn/base.py b/sklearn/base.py --- a/sklearn/base.py +++ b/sklearn/base.py @@ -8,6 +8,7 @@ from collections import defaultdict import platform import inspect +import re import numpy as np @@ -233,10 +234,13 @@ def set_params(self, **params): return self - def __repr__(self): + ...
diff --git a/sklearn/utils/tests/test_pprint.py b/sklearn/utils/tests/test_pprint.py --- a/sklearn/utils/tests/test_pprint.py +++ b/sklearn/utils/tests/test_pprint.py @@ -459,16 +459,78 @@ def test_n_max_elements_to_show(): assert pp.pformat(gs) == expected -def test_length_constraint(): - # When repr is s...
["sklearn/utils/tests/test_pprint.py::test_bruteforce_ellipsis"]
["sklearn/utils/tests/test_pprint.py::test_basic", "sklearn/utils/tests/test_pprint.py::test_changed_only", "sklearn/utils/tests/test_pprint.py::test_pipeline", "sklearn/utils/tests/test_pprint.py::test_deeply_nested", "sklearn/utils/tests/test_pprint.py::test_gridsearch", "sklearn/utils/tests/test_pprint.py::test_grid...
null
true
2019-03-12T14:40:46Z
1
43
1
2,807
0
0.8
1
0.55
1
0.611167
80.2085
9,239
swe_bench::test::1674
swe_bench
test
1,674
scikit-learn__scikit-learn-15535
scikit-learn/scikit-learn
scikit-learn/scikit-learn
python
70b0ddea992c01df1a41588fa9e2d130fb6b13f8
regression in input validation of clustering metrics ```python from sklearn.metrics.cluster import mutual_info_score import numpy as np x = np.random.choice(['a', 'b'], size=20).astype(object) mutual_info_score(x, x) ``` ValueError: could not convert string to float: 'b' while ```python x = np.random.choice(['a', 'b'...
broke in #10830 ping @glemaitre
diff --git a/sklearn/metrics/cluster/_supervised.py b/sklearn/metrics/cluster/_supervised.py --- a/sklearn/metrics/cluster/_supervised.py +++ b/sklearn/metrics/cluster/_supervised.py @@ -43,10 +43,10 @@ def check_clusterings(labels_true, labels_pred): The predicted labels. """ labels_true = check_arr...
diff --git a/sklearn/metrics/cluster/tests/test_common.py b/sklearn/metrics/cluster/tests/test_common.py --- a/sklearn/metrics/cluster/tests/test_common.py +++ b/sklearn/metrics/cluster/tests/test_common.py @@ -161,7 +161,9 @@ def generate_formats(y): y = np.array(y) yield y, 'array of ints' ...
["sklearn/metrics/cluster/tests/test_common.py::test_format_invariance[adjusted_mutual_info_score]", "sklearn/metrics/cluster/tests/test_common.py::test_format_invariance[adjusted_rand_score]", "sklearn/metrics/cluster/tests/test_common.py::test_format_invariance[completeness_score]", "sklearn/metrics/cluster/tests/tes...
["sklearn/metrics/cluster/tests/test_common.py::test_symmetric_non_symmetric_union", "sklearn/metrics/cluster/tests/test_common.py::test_symmetry[adjusted_rand_score-y10-y20]", "sklearn/metrics/cluster/tests/test_common.py::test_symmetry[v_measure_score-y11-y21]", "sklearn/metrics/cluster/tests/test_common.py::test_sym...
null
true
2019-11-05T02:09:55Z
1
4
8
524
0
0.8
1
0.7
0.8
0.100667
80.202
9,240
swe_bench::test::1189
swe_bench
test
1,189
psf__requests-2674
psf/requests
psf/requests
python
0be38a0c37c59c4b66ce908731da15b401655113
urllib3 exceptions passing through requests API I don't know if it's a design goal of requests to hide urllib3's exceptions and wrap them around requests.exceptions types. (If it's not IMHO it should be, but that's another discussion) If it is, I have at least two of them passing through that I have to catch in addit...
I definitely agree with you and would agree that these should be wrapped. Could you give us stack-traces so we can find where they're bleeding through? Sorry I don't have stack traces readily available :/ No worries. I have ideas as to where the DecodeError might be coming from but I'm not certain where the TimeoutE...
diff --git a/requests/adapters.py b/requests/adapters.py --- a/requests/adapters.py +++ b/requests/adapters.py @@ -19,6 +19,7 @@ from .utils import (DEFAULT_CA_BUNDLE_PATH, get_encoding_from_headers, prepend_scheme_if_needed, get_auth_from_url, urldefragauth) from .structures import CaseInsensiti...
diff --git a/test_requests.py b/test_requests.py --- a/test_requests.py +++ b/test_requests.py @@ -1655,6 +1655,16 @@ def test_urllib3_retries(): with pytest.raises(RetryError): s.get(httpbin('status/500')) + +def test_urllib3_pool_connection_closed(): + s = requests.Session() + s.mount('http://',...
["test_requests.py::RequestsTestCase::test_BASICAUTH_TUPLE_HTTP_200_OK_GET", "test_requests.py::RequestsTestCase::test_HTTP_200_OK_GET_ALTERNATIVE", "test_requests.py::RequestsTestCase::test_HTTP_200_OK_GET_WITH_PARAMS", "test_requests.py::RequestsTestCase::test_HTTP_200_OK_HEAD", "test_requests.py::RequestsTestCase::t...
["test_requests.py::RequestsTestCase::test_DIGESTAUTH_QUOTES_QOP_VALUE", "test_requests.py::RequestsTestCase::test_DIGESTAUTH_WRONG_HTTP_401_GET", "test_requests.py::RequestsTestCase::test_DIGEST_AUTH_RETURNS_COOKIE", "test_requests.py::RequestsTestCase::test_DIGEST_AUTH_SETS_SESSION_COOKIES", "test_requests.py::Reques...
null
true
2015-07-17T08:33:52Z
1
4
12
508
0
0.8
1
0.7
0.8
0.098
80.194
9,241
r2e_gym::train::4469
r2e_gym
train
4,469
numpy__f7f87596aee84daba42d90736af2eeb740eb14f7
numpy
numpy/numpy
python
f7f87596aee84daba42d90736af2eeb740eb14f7
**Analysis:** - **Key Parts from Commit Details and Test Results:** - **Commit Message:** "MAINT: Fix behavior of structured_to_unstructured on non-trivial dtypes." - **Test Failure in Old Commit:** `TestRecFunctions.test_structured_to_unstructured` failed with an assertion error where the actual element count was...
diff --git a/numpy/lib/recfunctions.py b/numpy/lib/recfunctions.py --- a/numpy/lib/recfunctions.py +++ b/numpy/lib/recfunctions.py @@ -874,16 +874,35 @@ scalar fields in the dtype "dt", including nested fields, in left to right order. """ + + # counts up elements in subarrays, including nested subarra...
diff --git a/numpy/lib/tests/test_recfunctions.py b/numpy/lib/tests/test_recfunctions.py --- a/numpy/lib/tests/test_recfunctions.py +++ b/numpy/lib/tests/test_recfunctions.py @@ -269,7 +269,8 @@ # including uniform fields with subarrays unpacked d = np.array([(1, [2, 3], [[ 4, 5], [ 6, 7]]), ...
null
null
namanjain12/numpy_final:f7f87596aee84daba42d90736af2eeb740eb14f7
true
null
1
46
null
3,656
0
0.75
1
0.5775
1
0.653333
80.16875
9,242
swe_bench::test::1183
swe_bench
test
1,183
psf__requests-2193
psf/requests
psf/requests
python
95161ed313db11296c3bd473336340dbb19bb347
[regression] urllib3.exceptions.ProtocolError not wrapped ``` py >>> requests.__version__ '2.4.0' >>> requests.get('http://localhost:1') # ... stacktrace requests.packages.urllib3.exceptions.ProtocolError: ('Connection aborted.', ConnectionRefusedError(111, 'Connection refused')) ```
Yup I'm hitting this too. Is this going to be fixed quick or should I fix my code? :) Same issue here. I'll take a look at this this weekend. =) Thanks for reporting folks! Looking at it right now @Lukasa Ok, suits me. =) If you get there before me I'll happily accept not doing the work. =D Thanks for the quick t...
diff --git a/requests/adapters.py b/requests/adapters.py --- a/requests/adapters.py +++ b/requests/adapters.py @@ -23,6 +23,7 @@ from .packages.urllib3.exceptions import HTTPError as _HTTPError from .packages.urllib3.exceptions import MaxRetryError from .packages.urllib3.exceptions import ProxyError as _ProxyError +...
diff --git a/test_requests.py b/test_requests.py --- a/test_requests.py +++ b/test_requests.py @@ -286,6 +286,14 @@ def test_BASICAUTH_TUPLE_HTTP_200_OK_GET(self): r = s.get(url) assert r.status_code == 200 + def test_connection_error(self): + """Connecting to an unknown domain should rais...
["test_requests.py::RequestsTestCase::test_BASICAUTH_TUPLE_HTTP_200_OK_GET", "test_requests.py::RequestsTestCase::test_DIGEST_AUTH_RETURNS_COOKIE", "test_requests.py::RequestsTestCase::test_HTTP_200_OK_GET_WITH_PARAMS", "test_requests.py::RequestsTestCase::test_connection_error", "test_requests.py::RequestsTestCase::te...
["test_requests.py::RequestsTestCase::test_DIGESTAUTH_QUOTES_QOP_VALUE", "test_requests.py::RequestsTestCase::test_DIGEST_AUTH_SETS_SESSION_COOKIES", "test_requests.py::RequestsTestCase::test_DIGEST_HTTP_200_OK_GET", "test_requests.py::RequestsTestCase::test_DIGEST_STREAM", "test_requests.py::RequestsTestCase::test_HTT...
null
true
2014-08-29T20:16:54Z
1
5
8
284
0
0.8
1
0.7
0.8
0.064
80.092
9,243
swe_bench::test::1087
swe_bench
test
1,087
matplotlib__matplotlib-25565
matplotlib/matplotlib
matplotlib/matplotlib
python
7ab47b41b6046c9b237fe96a4c6cfd454e2380c7
[Bug]: legend for Poly3dCollection fails ### Bug summary When plotting an iso surface using Poly3dCollection, ### Code for reproduction ```python import numpy as np import matplotlib.pyplot as plt from mpl_toolkits.mplot3d.art3d import Poly3DCollection from skimage import measure from skimage.draw import ellipsoid ...
This is a confirmed bug on the main. I tried a smaller example to reproduce the same ```python import numpy as np import matplotlib.pyplot as plt from mpl_toolkits.mplot3d.art3d import Poly3DCollection rng = np.random.default_rng(0) verts = rng.random(size=(10, 3)) mesh = Poly3DCollection([verts], label="sur...
diff --git a/lib/mpl_toolkits/mplot3d/art3d.py b/lib/mpl_toolkits/mplot3d/art3d.py --- a/lib/mpl_toolkits/mplot3d/art3d.py +++ b/lib/mpl_toolkits/mplot3d/art3d.py @@ -1063,7 +1063,7 @@ def get_facecolor(self): if not hasattr(self, '_facecolors2d'): self.axes.M = self.axes.get_proj() s...
diff --git a/lib/mpl_toolkits/mplot3d/tests/test_legend3d.py b/lib/mpl_toolkits/mplot3d/tests/test_legend3d.py --- a/lib/mpl_toolkits/mplot3d/tests/test_legend3d.py +++ b/lib/mpl_toolkits/mplot3d/tests/test_legend3d.py @@ -106,3 +106,16 @@ def test_contourf_legend_elements(): assert all(isinstance(a, Rectangle) fo...
["lib/mpl_toolkits/mplot3d/tests/test_legend3d.py::test_legend_Poly3dCollection"]
["lib/mpl_toolkits/mplot3d/tests/test_legend3d.py::test_legend_plot[png]", "lib/mpl_toolkits/mplot3d/tests/test_legend3d.py::test_legend_bar[png]", "lib/mpl_toolkits/mplot3d/tests/test_legend3d.py::test_fancy[png]", "lib/mpl_toolkits/mplot3d/tests/test_legend3d.py::test_linecollection_scaled_dashes", "lib/mpl_toolkits/...
null
true
2023-03-28T04:16:07Z
1
4
1
7,305
0
0.8
1
0.65
0.8
0.513333
80.015
9,244
swe_bench::test::1762
swe_bench
test
1,762
sphinx-doc__sphinx-7234
sphinx-doc/sphinx
sphinx-doc/sphinx
python
0e89979355c6c88adb960a7272c633d5afd34e67
Support for `@singledispatch` functions It would be nice if there was some mechanism to automagically pick up the overloads to a `@functools.singledispatch` function and list them together... e.g. ``` <Doc for the "master" function> <links to the available overloads> ```
diff --git a/sphinx/ext/autodoc/__init__.py b/sphinx/ext/autodoc/__init__.py --- a/sphinx/ext/autodoc/__init__.py +++ b/sphinx/ext/autodoc/__init__.py @@ -14,7 +14,8 @@ import re import warnings from types import ModuleType -from typing import Any, Callable, Dict, Iterator, List, Sequence, Set, Tuple, Union +from ty...
diff --git a/tests/roots/test-ext-autodoc/target/singledispatch.py b/tests/roots/test-ext-autodoc/target/singledispatch.py new file mode 100644 --- /dev/null +++ b/tests/roots/test-ext-autodoc/target/singledispatch.py @@ -0,0 +1,19 @@ +from functools import singledispatch + + +@singledispatch +def func(arg, kwarg=None)...
["tests/test_autodoc.py::test_singledispatch", "tests/test_autodoc.py::test_singledispatchmethod"]
["tests/test_autodoc.py::test_parse_name", "tests/test_autodoc.py::test_format_signature", "tests/test_autodoc.py::test_get_doc", "tests/test_autodoc.py::test_new_documenter", "tests/test_autodoc.py::test_attrgetter_using", "tests/test_autodoc.py::test_py_module", "tests/test_autodoc.py::test_autodoc_decorator", "tests...
null
true
2020-03-01T13:26:01Z
3
143
2
272
0
0.8
1
0.55
1
0.522
79.941
9,245
swe_bench::test::1344
swe_bench
test
1,344
pylint-dev__pylint-6196
pylint-dev/pylint
pylint-dev/pylint
python
98bb5bf8ebf15fbce960533e5983a71351a1fe3f
Use, misuse and confusion of ``@check_messages`` decorator ### Current problem The work on #5953 showed that specifically enabling just a single message is sometimes not working as expected. This is due to either missing message declaration in a checkers ``msgs`` attribute or the incorrect usage of the ``@check_messag...
Let me give an example on this point, as I think it is the most problematic: > Applying the decorator to a callback that not only emits messages but also does other things can have nasty side effects (false positives, false negatives, crashes) The checker I wanted to prepare has a good example for that. The relev...
diff --git a/pylint/checkers/utils.py b/pylint/checkers/utils.py --- a/pylint/checkers/utils.py +++ b/pylint/checkers/utils.py @@ -12,16 +12,17 @@ import re import string import warnings -from collections.abc import Callable, Iterable +from collections.abc import Iterable from functools import lru_cache, partial f...
diff --git a/tests/checkers/unittest_utils.py b/tests/checkers/unittest_utils.py --- a/tests/checkers/unittest_utils.py +++ b/tests/checkers/unittest_utils.py @@ -473,3 +473,18 @@ def test_deprecation_is_inside_lambda() -> None: with pytest.warns(DeprecationWarning) as records: utils.is_inside_lambda(node...
["tests/checkers/unittest_utils.py::testIsBuiltin[min-True]", "tests/checkers/unittest_utils.py::testIsBuiltin[__builtins__-True]", "tests/checkers/unittest_utils.py::testIsBuiltin[__path__-False]", "tests/checkers/unittest_utils.py::testIsBuiltin[__file__-False]", "tests/checkers/unittest_utils.py::testIsBuiltin[whate...
[]
null
true
2022-04-05T17:52:58Z
1
33
41
4,139
0
0.8
1
0.47
1
0.61
79.925
9,246
swe_bench::test::1787
swe_bench
test
1,787
sphinx-doc__sphinx-7762
sphinx-doc/sphinx
sphinx-doc/sphinx
python
c063c9c0fe383a20da613448d1f606b9635773b9
Add support for custom HTTP headers @ linkcheck **Is your feature request related to a problem? Please describe.** Currently, `Accept` HTTP header is hardcoded: https://github.com/sphinx-doc/sphinx/blob/dbefc9865d8c2c4006ed52475d1bff865358cd00/sphinx/builders/linkcheck.py#L111. And when I hit servers that require cust...
Confirmed. It seems better not to send `Accept:` header to GitHub. On the other hand, some server requires the header (see #5140). So it would be better to allow to customize it via code or configuration. Just an idea, `linkcheck_request_header` might be helpful for such case: ``` linkcheck_request_header = { ...
diff --git a/sphinx/builders/linkcheck.py b/sphinx/builders/linkcheck.py --- a/sphinx/builders/linkcheck.py +++ b/sphinx/builders/linkcheck.py @@ -16,7 +16,7 @@ from html.parser import HTMLParser from os import path from typing import Any, Dict, List, Set, Tuple -from urllib.parse import unquote +from urllib.parse i...
diff --git a/tests/test_build_linkcheck.py b/tests/test_build_linkcheck.py --- a/tests/test_build_linkcheck.py +++ b/tests/test_build_linkcheck.py @@ -124,3 +124,36 @@ def test_auth(app, status, warning): assert c_kwargs['auth'] == 'authinfo2' else: assert not c_kwargs['au...
["tests/test_build_linkcheck.py::test_linkcheck_request_headers"]
["tests/test_build_linkcheck.py::test_defaults", "tests/test_build_linkcheck.py::test_defaults_json", "tests/test_build_linkcheck.py::test_anchors_ignored", "tests/test_build_linkcheck.py::test_auth"]
null
true
2020-05-31T16:39:12Z
1
31
1
5,783
0
0.8
1
0.47
1
0.603333
79.905
9,247
swe_bench::test::1812
swe_bench
test
1,812
sphinx-doc__sphinx-8125
sphinx-doc/sphinx
sphinx-doc/sphinx
python
a163bbe870dc5bc7f3863ead37cd391be81fb0cc
All identifiers should be passed to autodoc-skip-member, even if not in __all__ **Is your feature request related to a problem? Please describe.** I have a Python project for which I've generated docs. It did well. Almost everything was doc'ed. I knew about the default of excluding anything starting with '_' so I creat...
diff --git a/sphinx/ext/autodoc/__init__.py b/sphinx/ext/autodoc/__init__.py --- a/sphinx/ext/autodoc/__init__.py +++ b/sphinx/ext/autodoc/__init__.py @@ -258,6 +258,32 @@ def __getattr__(self, name: str) -> Any: return None +class ObjectMember(tuple): + """A member of object. + + This is used fo...
diff --git a/tests/test_ext_autodoc_events.py b/tests/test_ext_autodoc_events.py --- a/tests/test_ext_autodoc_events.py +++ b/tests/test_ext_autodoc_events.py @@ -80,3 +80,28 @@ def test_between_exclude(app): ' third line', '', ] + + +@pytest.mark.sphinx('html', testroot='ext-autodoc') +def tes...
["tests/test_ext_autodoc_events.py::test_skip_module_member"]
["tests/test_ext_autodoc_events.py::test_process_docstring", "tests/test_ext_autodoc_events.py::test_cut_lines", "tests/test_ext_autodoc_events.py::test_between", "tests/test_ext_autodoc_events.py::test_between_exclude"]
null
true
2020-08-14T15:50:26Z
1
82
1
1,369
0
0.8
1
0.55
1
0.5015
79.8795
9,248
r2e_gym::train::419
r2e_gym
train
419
orange3__efefe6bebcf1fd7e539eeefe3bab7889d5821ab7
orange3
biolab/orange3
python
efefe6bebcf1fd7e539eeefe3bab7889d5821ab7
**Analysis:** - **Key Parts:** - **Commit Message:** "Data info displayed in the status bar." - **Commit Changes:** Added calls to `self.info.set_input_summary` and `self.info.set_output_summary` to update the status bar with data summaries. - **Test Results:** Previously, the `test_summary` test failed because ...
diff --git a/Orange/widgets/data/owselectcolumns.py b/Orange/widgets/data/owselectcolumns.py --- a/Orange/widgets/data/owselectcolumns.py +++ b/Orange/widgets/data/owselectcolumns.py @@ -14,6 +14,7 @@ from Orange.widgets.settings import ContextSetting, Setting from Orange.widgets.utils.listfilter import VariablesList...
diff --git a/Orange/widgets/data/tests/test_owselectcolumns.py b/Orange/widgets/data/tests/test_owselectcolumns.py --- a/Orange/widgets/data/tests/test_owselectcolumns.py +++ b/Orange/widgets/data/tests/test_owselectcolumns.py @@ -1,3 +1,4 @@ +# pylint: disable=unsubscriptable-object from unittest import TestCase fro...
null
null
namanjain12/orange3_final:efefe6bebcf1fd7e539eeefe3bab7889d5821ab7
true
null
1
9
null
3,219
0
0.75
1
0.5775
1
0.53
79.79875
9,249
swe_bench::dev::37
swe_bench
dev
37
pvlib__pvlib-python-1349
pvlib/pvlib-python
pvlib/pvlib-python
python
aba071f707f9025882e57f3e55cc9e3e90e869b2
`spectrum.spectrl2` calculates negative irradiance for angle of incidence outside +/- 90° When using pvlib (but also the spectrl2 implementation provided by NREL), I obtain negative Irradiance for a north-facing panel. From @kevinsa5 's [reply on StackOverflow](https://stackoverflow.com/questions/70172766/pvlib-bird198...
Thanks @cweickhmann! I want to take a closer look at the technical report to be sure, but on a first glance I think the problem here is the same one solved by the line marked with `# GH 526` in `irradiance.haydavies`: https://github.com/pvlib/pvlib-python/blob/aba071f707f9025882e57f3e55cc9e3e90e869b2/pvlib/irradian...
diff --git a/pvlib/spectrum/spectrl2.py b/pvlib/spectrum/spectrl2.py --- a/pvlib/spectrum/spectrl2.py +++ b/pvlib/spectrum/spectrl2.py @@ -260,6 +260,11 @@ def spectrl2(apparent_zenith, aoi, surface_tilt, ground_albedo, 2-5 kasten1966 kasten1966 kastenyoung1989 =================== ========== =...
diff --git a/pvlib/tests/test_spectrum.py b/pvlib/tests/test_spectrum.py --- a/pvlib/tests/test_spectrum.py +++ b/pvlib/tests/test_spectrum.py @@ -92,3 +92,17 @@ def test_dayofyear_missing(spectrl2_data): kwargs.pop('dayofyear') with pytest.raises(ValueError, match='dayofyear must be specified'): _ =...
["pvlib/tests/test_spectrum.py::test_aoi_gt_90"]
["pvlib/tests/test_spectrum.py::test_spectrl2", "pvlib/tests/test_spectrum.py::test_spectrl2_array", "pvlib/tests/test_spectrum.py::test_spectrl2_series", "pvlib/tests/test_spectrum.py::test_dayofyear_missing"]
null
true
2021-12-04T20:54:05Z
1
19
1
3,592
0
0.8
1
0.47
1
0.563333
79.785
9,250
swe_bench::test::1778
swe_bench
test
1,778
sphinx-doc__sphinx-7593
sphinx-doc/sphinx
sphinx-doc/sphinx
python
56772395bb945099a6d5331501c179dd2831fa1c
Convert :kbd: to nested <kbd> HTML elements **Is your feature request related to a problem? Please describe.** [:kbd:](https://www.sphinx-doc.org/en/master/usage/restructuredtext/roles.html#role-kbd) describes "a sequence of keystrokes". Sphinx converts it to a single [`<kbd>`](https://developer.mozilla.org/en-US/docs...
+1: Reasonable.
diff --git a/sphinx/builders/html/__init__.py b/sphinx/builders/html/__init__.py --- a/sphinx/builders/html/__init__.py +++ b/sphinx/builders/html/__init__.py @@ -1243,6 +1243,9 @@ def setup(app: Sphinx) -> Dict[str, Any]: # load default math renderer app.setup_extension('sphinx.ext.mathjax') + # load tr...
diff --git a/tests/test_markup.py b/tests/test_markup.py --- a/tests/test_markup.py +++ b/tests/test_markup.py @@ -16,6 +16,7 @@ from docutils.transforms.universal import SmartQuotes from sphinx import addnodes +from sphinx.builders.html.transforms import KeyboardTransform from sphinx.builders.latex import LaTeXBu...
["tests/test_markup.py::test_inline[verify-:rfc:`2324`-<p><span", "tests/test_markup.py::test_inline[verify-:rfc:`2324#id1`-<p><span", "tests/test_markup.py::test_inline[verify_re-``code", "tests/test_markup.py::test_inline[verify-:menuselection:`a", "tests/test_markup.py::test_inline[verify-:menuselection:`&Foo", "tes...
[]
null
true
2020-05-02T06:10:58Z
3
76
30
1,246
0
0.8
1
0.55
1
0.461
79.758
9,251
swe_bench::test::1562
swe_bench
test
1,562
scikit-learn__scikit-learn-12760
scikit-learn/scikit-learn
scikit-learn/scikit-learn
python
e73acef80de4159722b11e3cd6c20920382b9728
Davies Bouldin measure: division by zero I'm facing a problem with the davies bouldin measure. This is the warning that I get: .local/lib/python3.7/site-packages/sklearn/metrics/cluster/unsupervised.py:342: RuntimeWarning: divide by zero encountered in true_divide score = (intra_dists[:, None] + intra_dis...
It would help if you provide some data (whether or not it gives that warning) for which the implementations give different results (the stack overflow implementation won't work if your labels are not (0, 1, ..., n clusters - 1) Mmmh the labels are generated from MiniBatchKMeans so I _think_ they should be correct. I...
diff --git a/sklearn/metrics/cluster/unsupervised.py b/sklearn/metrics/cluster/unsupervised.py --- a/sklearn/metrics/cluster/unsupervised.py +++ b/sklearn/metrics/cluster/unsupervised.py @@ -299,8 +299,12 @@ def calinski_harabaz_score(X, labels): def davies_bouldin_score(X, labels): """Computes the Davies-Bouldin...
diff --git a/sklearn/metrics/cluster/tests/test_unsupervised.py b/sklearn/metrics/cluster/tests/test_unsupervised.py --- a/sklearn/metrics/cluster/tests/test_unsupervised.py +++ b/sklearn/metrics/cluster/tests/test_unsupervised.py @@ -234,6 +234,15 @@ def test_davies_bouldin_score(): labels = [0] * 10 + [1] * 10 +...
["sklearn/metrics/cluster/tests/test_unsupervised.py::test_davies_bouldin_score"]
["sklearn/metrics/cluster/tests/test_unsupervised.py::test_silhouette", "sklearn/metrics/cluster/tests/test_unsupervised.py::test_cluster_size_1", "sklearn/metrics/cluster/tests/test_unsupervised.py::test_silhouette_paper_example", "sklearn/metrics/cluster/tests/test_unsupervised.py::test_correct_labelsize", "sklearn/m...
null
true
2018-12-12T15:03:09Z
1
15
1
4,737
0
0.8
1
0.47
1
0.55
79.745
9,252
swe_bench::dev::207
swe_bench
dev
207
sqlfluff__sqlfluff-4041
sqlfluff/sqlfluff
sqlfluff/sqlfluff
python
66fd602d0824138f212082c8fdf381266a9edad3
Deduplicate violations in the same position ### Search before asking - [X] I searched the [issues](https://github.com/sqlfluff/sqlfluff/issues) and found no similar issues. ### Description When linting jinja files with loops we get multiple output violations for each time around the loop. e.g. ```sql select a, ...
diff --git a/src/sqlfluff/core/errors.py b/src/sqlfluff/core/errors.py --- a/src/sqlfluff/core/errors.py +++ b/src/sqlfluff/core/errors.py @@ -1,5 +1,5 @@ """Errors - these are closely linked to what used to be called violations.""" -from typing import Optional, Tuple, List +from typing import Optional, Tuple, Any, Li...
diff --git a/test/core/linter_test.py b/test/core/linter_test.py --- a/test/core/linter_test.py +++ b/test/core/linter_test.py @@ -407,8 +407,9 @@ def test__linter__empty_file(): ( False, [ - ("L006", 3, 16), - ("L006", 3, 16), + # there ar...
["test/core/linter_test.py::test__linter__mask_templated_violations[False-check_tuples1]"]
["test/core/linter_test.py::test__linter__path_from_paths__dir", "test/core/linter_test.py::test__linter__path_from_paths__default", "test/core/linter_test.py::test__linter__path_from_paths__exts", "test/core/linter_test.py::test__linter__path_from_paths__file", "test/core/linter_test.py::test__linter__skip_large_bytes...
null
true
2022-11-08T09:57:07Z
3
68
1
1,354
0
0.8
1
0.55
1
0.452333
79.732
9,253
swe_bench::dev::91
swe_bench
dev
91
pydicom__pydicom-1375
pydicom/pydicom
pydicom/pydicom
python
c14bf96040e4cc930db890638b9f190d4ede0a21
Pickling/unpickling timezone in DT does not work **Describe the bug** The following tests fail because the timezone is not set in the unpickled `DT`: ```py def test_pickling_with_timezone(): dt = pydicom.valuerep.DT("19111213212123-0630") loaded_dt = pickle.loads(pickle.dumps(dt)) assert dt...
diff --git a/pydicom/valuerep.py b/pydicom/valuerep.py --- a/pydicom/valuerep.py +++ b/pydicom/valuerep.py @@ -2,23 +2,19 @@ """Special classes for DICOM value representations (VR)""" import datetime -from decimal import Decimal -from math import floor, isfinite, log10 -import platform import re import sys +impor...
diff --git a/pydicom/tests/test_valuerep.py b/pydicom/tests/test_valuerep.py --- a/pydicom/tests/test_valuerep.py +++ b/pydicom/tests/test_valuerep.py @@ -5,10 +5,7 @@ import copy from datetime import datetime, date, time, timedelta, timezone from decimal import Decimal -try: - import cPickle as pickle -except Im...
["pydicom/tests/test_valuerep.py::TestDT::test_pickling_with_timezone", "pydicom/tests/test_valuerep.py::TestDT::test_pickling_dt_from_datetime_with_timezone", "pydicom/tests/test_valuerep.py::TestDT::test_datetime_behavior", "pydicom/tests/test_valuerep.py::TestDA::test_date_behavior"]
["pydicom/tests/test_valuerep.py::TestTM::test_pickling", "pydicom/tests/test_valuerep.py::TestTM::test_pickling_tm_from_time", "pydicom/tests/test_valuerep.py::TestTM::test_str_and_repr", "pydicom/tests/test_valuerep.py::TestTM::test_new_empty_str", "pydicom/tests/test_valuerep.py::TestTM::test_new_str_conversion", "p...
null
true
2021-05-03T18:27:35Z
1
95
4
780
0
0.8
1
0.55
1
0.446667
79.715
9,254
r2e_gym::train::5237
r2e_gym
train
5,237
pyramid__c7bff5045ad928166695fb6bb8154443387e4184
pyramid
pylons/pyramid
python
c7bff5045ad928166695fb6bb8154443387e4184
**Title:** Router Fails to Utilize Alternative Views When `PredicateMismatch` is Raised **Description:** When a view callable raises a `PredicateMismatch` exception, the router does not attempt to find other views that might satisfy the request predicates. This leads to the request failing with a `PredicateMismatch` e...
diff --git a/CHANGES.txt b/CHANGES.txt --- a/CHANGES.txt +++ b/CHANGES.txt @@ -10,6 +10,49 @@ ``AttributeError`` that could be raised from any user-defined code within a dynamic property. It is recommended to define a dynamic ACL as a callable to avoid this ambiguity. See https://github.com/Pylons/pyramid/issu...
diff --git a/pyramid/tests/test_router.py b/pyramid/tests/test_router.py --- a/pyramid/tests/test_router.py +++ b/pyramid/tests/test_router.py @@ -1164,6 +1164,78 @@ start_response = DummyStartResponse() self.assertRaises(RuntimeError, router, environ, start_response) + def test_call_view_raises_...
null
null
namanjain12/pyramid_final:c7bff5045ad928166695fb6bb8154443387e4184
true
null
2
64
null
1,722
0.03125
0.75
1
0.6375
1
0.500333
79.671527
9,255
swe_bench::test::16
swe_bench
test
16
astropy__astropy-13158
astropy/astropy
astropy/astropy
python
b185ca184f8dd574531dcc21e797f00537fefa6a
Model evaluation fails if any model parameter is a `MagUnit` type value ### Description As discovered by @larrybradley in PR #13116, models will fail to evaluate when one of the parameters has a `MagUnit`. A simplified reproducer is the following code: ```python from astropy.modeling.models import Const1D import ast...
Note that the simple change of https://github.com/astropy/astropy/blob/675dc03e138d5c6a1cb6936a6b2c3211f39049d3/astropy/modeling/core.py#L2704 to `value = value * unit` with the above example still passes all the modeling unit tests. However, it produces a different error ```python ----------------------------------...
diff --git a/astropy/modeling/bounding_box.py b/astropy/modeling/bounding_box.py --- a/astropy/modeling/bounding_box.py +++ b/astropy/modeling/bounding_box.py @@ -520,7 +520,7 @@ def _set_outputs_unit(outputs, valid_outputs_unit): """ if valid_outputs_unit is not None: - return Quantity(o...
diff --git a/astropy/modeling/tests/test_models_quantities.py b/astropy/modeling/tests/test_models_quantities.py --- a/astropy/modeling/tests/test_models_quantities.py +++ b/astropy/modeling/tests/test_models_quantities.py @@ -18,7 +18,7 @@ from astropy.modeling.physical_models import Drude1D, Plummer1D from astropy....
["astropy/modeling/tests/test_models_quantities.py::test_models_evaluate_with_units[model38]", "astropy/modeling/tests/test_models_quantities.py::test_models_evaluate_with_units_x_array[model38]", "astropy/modeling/tests/test_models_quantities.py::test_models_evaluate_with_units_param_array[model38]", "astropy/modeling...
["astropy/modeling/tests/test_models_quantities.py::test_models_evaluate_without_units[model0]", "astropy/modeling/tests/test_models_quantities.py::test_models_evaluate_without_units[model2]", "astropy/modeling/tests/test_models_quantities.py::test_models_evaluate_without_units[model3]", "astropy/modeling/tests/test_mo...
null
true
2022-04-22T17:32:23Z
7
100
17
4,921
0
0.8
1
0.77
0.6
0.833333
79.645
9,256
r2e_gym::train::253
r2e_gym
train
253
orange3__32f5693e9d037ff1b0d76f25adf3db26912f6763
orange3
biolab/orange3
python
32f5693e9d037ff1b0d76f25adf3db26912f6763
**Analysis:** - **Key Parts:** - **Commit Message:** "Edit Domain: Map bool to bool." - **Commit Patch:** Introduces a mapping from string values `"True"` and `"False"` to boolean `True` and `False` respectively in `io_base.py`. - **Failing Test Before Commit:** `test_annotation_bool` failed with `AssertionError...
diff --git a/Orange/data/io_base.py b/Orange/data/io_base.py --- a/Orange/data/io_base.py +++ b/Orange/data/io_base.py @@ -61,6 +61,9 @@ except SyntaxError: # If parsing failed, treat value as string pass + # map True ...
diff --git a/Orange/widgets/data/tests/test_oweditdomain.py b/Orange/widgets/data/tests/test_oweditdomain.py --- a/Orange/widgets/data/tests/test_oweditdomain.py +++ b/Orange/widgets/data/tests/test_oweditdomain.py @@ -217,6 +217,30 @@ t2 = self.get_output(self.widget.Outputs.data) self.assertEqual(t2...
null
null
namanjain12/orange3_final:32f5693e9d037ff1b0d76f25adf3db26912f6763
true
null
1
3
null
2,478
0
0.75
1
0.75
0.8
0.423
79.644
9,257
r2e_gym::train::5937
r2e_gym
train
5,937
tornado__1c3d22fcf5305ebe506c4ac1e5ab760b7ddf4c04
tornado
tornadoweb/tornado
python
1c3d22fcf5305ebe506c4ac1e5ab760b7ddf4c04
**Analysis:** - **Key Parts of Commit Details and Test Results:** - **Commit Message:** Fix multiple calls to `Event.clear`. - **Commit Patch:** Modifies the `clear` method in `tornado/locks.py` to reset the future only if it's done. - **Failing Test in Old Commit:** The `test_event_wait_clear` failed with an `A...
diff --git a/tornado/locks.py b/tornado/locks.py --- a/tornado/locks.py +++ b/tornado/locks.py @@ -110,7 +110,8 @@ Calls to `.wait` will block until `.set` is called. """ - self._future = Future() + if self._future.done(): + self._future = Future() def wait(se...
diff --git a/tornado/test/locks_test.py b/tornado/test/locks_test.py --- a/tornado/test/locks_test.py +++ b/tornado/test/locks_test.py @@ -206,6 +206,15 @@ e.set() self.assertTrue(e.is_set()) + def test_event_wait_clear(self): + e = locks.Event() + f0 = e.wait() + e.clear() +...
null
null
namanjain12/tornado_final:1c3d22fcf5305ebe506c4ac1e5ab760b7ddf4c04
true
null
1
3
null
2,460
0
0.75
1
0.75
0.8
0.42
79.635
9,258
swe_bench::test::1051
swe_bench
test
1,051
matplotlib__matplotlib-24691
matplotlib/matplotlib
matplotlib/matplotlib
python
78bf53caacbb5ce0dc7aa73f07a74c99f1ed919b
[ENH]: set facecolor and edgecolor alpha separately ### Problem I like making diagrams where my patch edge is solid but the fill is semi-transparent - in my case usually to fade out the color, but it's also useful to emphasize boundaries ![image](https://user-images.githubusercontent.com/1300499/206788819-3670bbc3-3b...
diff --git a/galleries/examples/color/set_alpha.py b/galleries/examples/color/set_alpha.py new file mode 100644 --- /dev/null +++ b/galleries/examples/color/set_alpha.py @@ -0,0 +1,53 @@ +""" +================================= +Ways to set a color's alpha value +================================= + +Compare setting alph...
diff --git a/lib/matplotlib/tests/test_colors.py b/lib/matplotlib/tests/test_colors.py --- a/lib/matplotlib/tests/test_colors.py +++ b/lib/matplotlib/tests/test_colors.py @@ -1307,6 +1307,51 @@ def test_to_rgba_array_alpha_array(): assert_array_equal(c[:, 3], alpha) +def test_to_rgba_array_accepts_color_alpha_...
["lib/matplotlib/tests/test_colors.py::test_to_rgba_array_accepts_color_alpha_tuple", "lib/matplotlib/tests/test_colors.py::test_to_rgba_array_explicit_alpha_overrides_tuple_alpha", "lib/matplotlib/tests/test_colors.py::test_to_rgba_array_accepts_color_alpha_tuple_with_multiple_colors", "lib/matplotlib/tests/test_color...
["lib/matplotlib/tests/test_colors.py::test_create_lookup_table[5-result0]", "lib/matplotlib/tests/test_colors.py::test_create_lookup_table[2-result1]", "lib/matplotlib/tests/test_colors.py::test_create_lookup_table[1-result2]", "lib/matplotlib/tests/test_colors.py::test_index_dtype[uint8]", "lib/matplotlib/tests/test_...
null
true
2022-12-10T18:13:37Z
3
75
10
817
0
0.8
1
0.55
1
0.386167
79.5335
9,259
swe_bench::test::1256
swe_bench
test
1,256
pydata__xarray-4827
pydata/xarray
pydata/xarray
python
f98d6f065db2ad1f8911cb22aa04b4e0210ecee4
Option for combine_attrs with conflicting values silently dropped `merge()` currently supports four options for merging `attrs`: ``` combine_attrs : {"drop", "identical", "no_conflicts", "override"}, \ default: "drop" String indicating how to combine attrs of the objects being merged: ...
diff --git a/xarray/core/combine.py b/xarray/core/combine.py --- a/xarray/core/combine.py +++ b/xarray/core/combine.py @@ -412,14 +412,16 @@ def combine_nested( - "override": if indexes are of same size, rewrite indexes to be those of the first object with that dimension. Indexes for the same ...
diff --git a/xarray/tests/test_combine.py b/xarray/tests/test_combine.py --- a/xarray/tests/test_combine.py +++ b/xarray/tests/test_combine.py @@ -732,6 +732,17 @@ def test_combine_coords_combine_attrs_identical(self): objs, concat_dim="x", join="outer", combine_attrs="identical" ) + ...
["xarray/tests/test_combine.py::TestCombineAuto::test_combine_nested_combine_attrs_drop_conflicts", "xarray/tests/test_concat.py::TestConcatDataset::test_concat_combine_attrs_kwarg[drop_conflicts-var1_attrs8-var2_attrs8-expected_attrs8-False]", "xarray/tests/test_merge.py::TestMergeFunction::test_merge_arrays_attrs[dro...
["xarray/tests/test_combine.py::TestTileIDsFromNestedList::test_1d", "xarray/tests/test_combine.py::TestTileIDsFromNestedList::test_2d", "xarray/tests/test_combine.py::TestTileIDsFromNestedList::test_3d", "xarray/tests/test_combine.py::TestTileIDsFromNestedList::test_single_dataset", "xarray/tests/test_combine.py::Test...
null
true
2021-01-19T22:54:10Z
3
47
5
1,207
0
0.8
1
0.55
1
0.357833
79.4485
9,260
r2e_gym::train::5648
r2e_gym
train
5,648
scrapy__094dde6fdb1b03351888e437828af5da03f46352
scrapy
scrapy/scrapy
python
094dde6fdb1b03351888e437828af5da03f46352
**Title:** SitemapSpider Fails to Properly Filter Sitemap Entries Based on Attributes **Description:** When utilizing the `SitemapSpider` with custom filtering criteria, certain sitemap entries are not being filtered as intended. This results in either unwanted URLs being processed or valid URLs being excluded from cr...
diff --git a/docs/topics/spiders.rst b/docs/topics/spiders.rst --- a/docs/topics/spiders.rst +++ b/docs/topics/spiders.rst @@ -680,6 +680,50 @@ Default is ``sitemap_alternate_links`` disabled. + .. method:: sitemap_filter(entries) + + This is a filter funtion that could be overridden to select si...
diff --git a/tests/test_spider.py b/tests/test_spider.py --- a/tests/test_spider.py +++ b/tests/test_spider.py @@ -375,6 +375,104 @@ 'http://www.example.com/schweiz-deutsch/', 'http://www.example.com/italiano/']) + def test_sitemap_filter(self): + sitema...
null
null
namanjain12/scrapy_final:094dde6fdb1b03351888e437828af5da03f46352
true
null
2
58
null
1,347
0.03125
0.75
1
0.6375
1
0.417833
79.424027
9,261
swe_bench::test::1727
swe_bench
test
1,727
sphinx-doc__sphinx-10207
sphinx-doc/sphinx
sphinx-doc/sphinx
python
8b23f6db12d9fcdb6e1ca2015ea32e3e2e1fbdb6
Allow keyboard shortcut `/` to focus on search Various web services, notably GMail and GitHub, allow the keyboard shortcut `/` for focusing on the search box. It would be nice if Sphinx templates would do the same. --- - Bitbucket: https://bitbucket.org/birkenfeld/sphinx/issue/691 - Originally reported by: Ram Rachum ...
_From Georg Brandl on 2011-05-15 09:42:40+00:00_ Good idea. I do support the idea! It would be very handy. I think this is good for the first contribution. Does anybody try to fix this? Yes, I've just created a pull request for it.
diff --git a/sphinx/builders/latex/transforms.py b/sphinx/builders/latex/transforms.py --- a/sphinx/builders/latex/transforms.py +++ b/sphinx/builders/latex/transforms.py @@ -237,7 +237,8 @@ class LaTeXFootnoteTransform(SphinxPostTransform): blah blah blah ... * Replace second and subsequent footnote ...
diff --git a/tests/roots/test-footnotes/index.rst b/tests/roots/test-footnotes/index.rst --- a/tests/roots/test-footnotes/index.rst +++ b/tests/roots/test-footnotes/index.rst @@ -33,6 +33,7 @@ The section with a reference to [AuthorYear]_ * Second footnote: [1]_ * `Sphinx <http://sphinx-doc.org/>`_ * Third footnote:...
["tests/test_build_latex.py::test_footnote", "tests/test_build_latex.py::test_footnote_referred_multiple_times", "tests/test_build_latex.py::test_latex_show_urls_is_inline", "tests/test_build_latex.py::test_latex_show_urls_is_footnote", "tests/test_build_latex.py::test_latex_show_urls_is_no", "tests/test_build_latex.py...
["tests/test_build_html.py::test_html_warnings", "tests/test_build_html.py::test_html4_output", "tests/test_build_html.py::test_html5_output[images.html-expect0]", "tests/test_build_html.py::test_html5_output[images.html-expect1]", "tests/test_build_html.py::test_html5_output[images.html-expect2]", "tests/test_build_ht...
null
true
2022-02-19T07:09:00Z
7
74
7
4,360
0
0.8
1
0.77
0.6
0.746667
79.385
9,262
swe_bench::test::1150
swe_bench
test
1,150
mwaskom__seaborn-3407
mwaskom/seaborn
mwaskom/seaborn
python
515286e02be3e4c0ff2ef4addb34a53c4a676ee4
pairplot raises KeyError with MultiIndex DataFrame When trying to pairplot a MultiIndex DataFrame, `pairplot` raises a `KeyError`: MRE: ```python import numpy as np import pandas as pd import seaborn as sns data = { ("A", "1"): np.random.rand(100), ("A", "2"): np.random.rand(100), ("B", "1"): np.random.r...
diff --git a/seaborn/axisgrid.py b/seaborn/axisgrid.py --- a/seaborn/axisgrid.py +++ b/seaborn/axisgrid.py @@ -1472,8 +1472,8 @@ def map_diag(self, func, **kwargs): for ax in diag_axes[1:]: share_axis(diag_axes[0], ax, "y") - self.diag_vars = np.array(diag_vars, np.obj...
diff --git a/tests/test_axisgrid.py b/tests/test_axisgrid.py --- a/tests/test_axisgrid.py +++ b/tests/test_axisgrid.py @@ -1422,6 +1422,13 @@ def test_pairplot_markers(self): with pytest.warns(UserWarning): g = ag.pairplot(self.df, hue="a", vars=vars, markers=markers[:-2]) + def test_pairplot...
["tests/test_axisgrid.py::TestPairGrid::test_pairplot_column_multiindex"]
["tests/test_axisgrid.py::TestFacetGrid::test_self_data", "tests/test_axisgrid.py::TestFacetGrid::test_self_figure", "tests/test_axisgrid.py::TestFacetGrid::test_self_axes", "tests/test_axisgrid.py::TestFacetGrid::test_axes_array_size", "tests/test_axisgrid.py::TestFacetGrid::test_single_axes", "tests/test_axisgrid.py:...
null
true
2023-06-27T23:17:29Z
1
4
1
2,751
0
0.8
1
0.7
0.8
0.471833
79.3155
9,263
swe_bench::test::1134
swe_bench
test
1,134
mwaskom__seaborn-2846
mwaskom/seaborn
mwaskom/seaborn
python
8bae24f665f3732b66f8edf8d9bfd4a6d0db1906
relplot does not handle numpy-types for dimensional variables Test case: ```python sns.relplot( data=tips, x="total_bill", y=tips["tip"].to_numpy(), col=tips["time"].to_numpy(), ) ``` ![image](https://user-images.githubusercontent.com/315810/127155278-0d2527ca-1d07-49f3-80f9-52a16cd3072b.png) Note how...
diff --git a/seaborn/distributions.py b/seaborn/distributions.py --- a/seaborn/distributions.py +++ b/seaborn/distributions.py @@ -2137,8 +2137,8 @@ def displot( grid_data = p.plot_data.rename(columns=p.variables) grid_data = grid_data.loc[:, ~grid_data.columns.duplicated()] - col_name = p.variables.get(...
diff --git a/tests/test_relational.py b/tests/test_relational.py --- a/tests/test_relational.py +++ b/tests/test_relational.py @@ -497,16 +497,18 @@ def test_relplot_complex(self, long_df): assert_array_equal(x, grp_df["x"]) assert_array_equal(y, grp_df["y"]) - @pytest.mark.parame...
["tests/test_relational.py::TestRelationalPlotter::test_relplot_vectors[numpy]", "tests/test_relational.py::TestRelationalPlotter::test_relplot_vectors[list]", "tests/test_relational.py::TestRelationalPlotter::test_relplot_wide"]
["tests/test_relational.py::TestRelationalPlotter::test_wide_df_variables", "tests/test_relational.py::TestRelationalPlotter::test_wide_df_with_nonnumeric_variables", "tests/test_relational.py::TestRelationalPlotter::test_wide_array_variables", "tests/test_relational.py::TestRelationalPlotter::test_flat_array_variables...
null
true
2022-06-11T16:24:34Z
2
16
3
1,400
0
0.8
1
0.55
1
0.286667
79.235
9,264
swe_bench::dev::165
swe_bench
dev
165
pyvista__pyvista-4311
pyvista/pyvista
pyvista/pyvista
python
db6ee8dd4a747b8864caae36c5d05883976a3ae5
Allow passing through cell data in `to_tetrahedra` method in RectilinearGrid ### Describe the feature you would like to be added. No cell data is passed through when converting to a tetrahedra. The user can currently request to pass through the original cell id, but it requires one more step to regenerate the cell da...
diff --git a/pyvista/core/datasetattributes.py b/pyvista/core/datasetattributes.py --- a/pyvista/core/datasetattributes.py +++ b/pyvista/core/datasetattributes.py @@ -1072,7 +1072,12 @@ def active_scalars_name(self) -> Optional[str]: """ if self.GetScalars() is not None: - return str(self...
diff --git a/tests/filters/test_rectilinear_grid.py b/tests/filters/test_rectilinear_grid.py --- a/tests/filters/test_rectilinear_grid.py +++ b/tests/filters/test_rectilinear_grid.py @@ -45,3 +45,25 @@ def test_to_tetrahedral_mixed(tiny_rectilinear): def test_to_tetrahedral_edge_case(): with pytest.raises(Runtime...
["tests/filters/test_rectilinear_grid.py::test_to_tetrahedral_pass_cell_ids", "tests/filters/test_rectilinear_grid.py::test_to_tetrahedral_pass_cell_data"]
["tests/filters/test_rectilinear_grid.py::test_to_tetrahedral[5]", "tests/filters/test_rectilinear_grid.py::test_to_tetrahedral[6]", "tests/filters/test_rectilinear_grid.py::test_to_tetrahedral[12]", "tests/filters/test_rectilinear_grid.py::test_to_tetrahedral_raise", "tests/filters/test_rectilinear_grid.py::test_to_te...
null
true
2023-04-20T18:23:33Z
2
38
2
926
0
0.8
1
0.55
1
0.281
79.218
9,265
swe_bench::test::1568
swe_bench
test
1,568
scikit-learn__scikit-learn-12938
scikit-learn/scikit-learn
scikit-learn/scikit-learn
python
acb810647233e40839203ac553429e8663169702
AttributeError: 'PrettyPrinter' object has no attribute '_indent_at_name' There's a failing example in #12654, and here's a piece of code causing it: ``` import numpy as np from sklearn.datasets import load_digits from sklearn.model_selection import GridSearchCV from sklearn.pipeline import Pipeline from sklearn.svm i...
So for some reason, the class is `PrettyPrinter` instead of `_EstimatorPrettyPrinter` (which inherits from `PrettyPrinter`). But then ``` File "/path/to//sklearn/utils/_pprint.py", line 175, in _pprint_estimator if self._indent_at_name: ``` is a `_EstimatorPrettyPrinter` method, so I don't understand what...
diff --git a/sklearn/utils/_pprint.py b/sklearn/utils/_pprint.py --- a/sklearn/utils/_pprint.py +++ b/sklearn/utils/_pprint.py @@ -321,7 +321,10 @@ def _pprint_key_val_tuple(self, object, stream, indent, allowance, context, self._format(v, stream, indent + len(rep) + len(middle), allowance, ...
diff --git a/sklearn/utils/tests/test_pprint.py b/sklearn/utils/tests/test_pprint.py --- a/sklearn/utils/tests/test_pprint.py +++ b/sklearn/utils/tests/test_pprint.py @@ -1,4 +1,5 @@ import re +from pprint import PrettyPrinter from sklearn.utils._pprint import _EstimatorPrettyPrinter from sklearn.pipeline import m...
["sklearn/utils/tests/test_pprint.py::test_builtin_prettyprinter"]
["sklearn/utils/tests/test_pprint.py::test_basic", "sklearn/utils/tests/test_pprint.py::test_changed_only", "sklearn/utils/tests/test_pprint.py::test_pipeline", "sklearn/utils/tests/test_pprint.py::test_deeply_nested", "sklearn/utils/tests/test_pprint.py::test_gridsearch", "sklearn/utils/tests/test_pprint.py::test_grid...
null
true
2019-01-07T22:45:53Z
1
5
1
4,730
0
0.8
1
0.62
0.8
0.516667
79.17
9,266
swe_bench::test::1421
swe_bench
test
1,421
pytest-dev__pytest-6214
pytest-dev/pytest
pytest-dev/pytest
python
f24f20a46e0efd8b375ab3457e9f6864e59979e5
--setup-plan and --setup-only seem to claim different things I have the following example: ```python from pytest import fixture @fixture(scope='module') def fixture1(): print('Setup of fixture1') yield 'fixture1' print('Teardown of fixture1') @fixture(scope='module') def fixture2(): print('Setup of fi...
Hi @oscarh, could you state your expectations a little bit clearer? Are you surprised, that in your first output, the setup and teardown is announced more often than they would actually occur? I try to have a look into it over the weekend, but as far I remember, it was not straightforward to arrange the fixtures at th...
diff --git a/src/_pytest/setupplan.py b/src/_pytest/setupplan.py --- a/src/_pytest/setupplan.py +++ b/src/_pytest/setupplan.py @@ -16,7 +16,8 @@ def pytest_addoption(parser): def pytest_fixture_setup(fixturedef, request): # Will return a dummy fixture if the setuponly option is provided. if request.config.op...
diff --git a/testing/python/setup_plan.py b/testing/python/setup_plan.py --- a/testing/python/setup_plan.py +++ b/testing/python/setup_plan.py @@ -17,3 +17,94 @@ def test_arg(arg): result.stdout.fnmatch_lines( ["*SETUP F arg*", "*test_arg (fixtures used: arg)", "*TEARDOWN F arg*"] ) + + +def test_...
["testing/python/setup_plan.py::test_show_multi_test_fixture_setup_and_teardown_correctly_simple", "testing/python/setup_plan.py::test_show_multi_test_fixture_setup_and_teardown_same_as_setup_show"]
["testing/python/setup_plan.py::test_show_fixtures_and_test"]
null
true
2019-11-17T22:54:57Z
1
3
2
3,593
0
0.8
1
0.62
0.8
0.51
79.15
9,267
swe_bench::test::1147
swe_bench
test
1,147
mwaskom__seaborn-3217
mwaskom/seaborn
mwaskom/seaborn
python
623b0b723c671e99f04e8ababf19adc563f30168
Width computation after histogram slightly wrong with log scale Note the slight overlap here: ```python ( so.Plot(tips, "total_bill") .add(so.Bars(alpha=.3, edgewidth=0), so.Hist(bins=4)) .scale(x="log") ) ``` ![image](https://user-images.githubusercontent.com/315810/178975852-d8fd830e-ae69-487d-be22-36531...
diff --git a/seaborn/_core/plot.py b/seaborn/_core/plot.py --- a/seaborn/_core/plot.py +++ b/seaborn/_core/plot.py @@ -1377,10 +1377,9 @@ def _unscale_coords( ) -> DataFrame: # TODO do we still have numbers in the variable name at this point? coord_cols = [c for c in df if re.match(r"^[xy]\D*$", ...
diff --git a/tests/_marks/test_bar.py b/tests/_marks/test_bar.py --- a/tests/_marks/test_bar.py +++ b/tests/_marks/test_bar.py @@ -200,3 +200,13 @@ def test_unfilled(self, x, y): colors = p._theme["axes.prop_cycle"].by_key()["color"] assert_array_equal(fcs, to_rgba_array([colors[0]] * len(x), 0)) ...
["tests/_marks/test_bar.py::TestBars::test_log_scale"]
["tests/_marks/test_bar.py::TestBar::test_categorical_positions_vertical", "tests/_marks/test_bar.py::TestBar::test_categorical_positions_horizontal", "tests/_marks/test_bar.py::TestBar::test_numeric_positions_vertical", "tests/_marks/test_bar.py::TestBar::test_numeric_positions_horizontal", "tests/_marks/test_bar.py::...
null
true
2023-01-10T12:37:28Z
2
31
1
906
0
0.8
1
0.55
1
0.254333
79.138
9,268
r2e_gym::train::389
r2e_gym
train
389
orange3__ba814bd7c2ff10e3daf74b6f32cc596ce2255029
orange3
biolab/orange3
python
ba814bd7c2ff10e3daf74b6f32cc596ce2255029
**Title:** Scatterplot Crashes with ValueError When Using a Single Time Tick **Description:** When creating a scatterplot with only one time tick, the application crashes due to a `ValueError`. This occurs because the code attempts to calculate the minimum spacing between ticks, but with only one tick, the sequence is...
diff --git a/Orange/widgets/visualize/owscatterplotgraph.py b/Orange/widgets/visualize/owscatterplotgraph.py --- a/Orange/widgets/visualize/owscatterplotgraph.py +++ b/Orange/widgets/visualize/owscatterplotgraph.py @@ -302,7 +302,10 @@ step = int(np.ceil(float(len(ticks)) / max_steps)) ticks =...
diff --git a/Orange/widgets/visualize/tests/test_owscatterplot.py b/Orange/widgets/visualize/tests/test_owscatterplot.py --- a/Orange/widgets/visualize/tests/test_owscatterplot.py +++ b/Orange/widgets/visualize/tests/test_owscatterplot.py @@ -1130,6 +1130,10 @@ with self.assertRaises(ValueError): ...
null
null
namanjain12/orange3_final:ba814bd7c2ff10e3daf74b6f32cc596ce2255029
true
null
1
5
null
1,348
0
0.75
1
0.75
0.8
0.241333
79.099
9,269
swe_bench::test::1858
swe_bench
test
1,858
sphinx-doc__sphinx-8951
sphinx-doc/sphinx
sphinx-doc/sphinx
python
b923165d5ef289ba39bb964201d4a036eb5a5ff6
Support C++20's spaceship operator C++20 has the new spaceship operator `<=>` for three way comparisons which can also be [defaulted](https://en.cppreference.com/w/cpp/language/default_comparisons) (not sure if the latter matters to Sphinx). I hope this is a problem with Sphinx at all and not with the Breathe extensio...
diff --git a/sphinx/domains/cpp.py b/sphinx/domains/cpp.py --- a/sphinx/domains/cpp.py +++ b/sphinx/domains/cpp.py @@ -306,6 +306,7 @@ | \+\+ | -- | ->\*? | \, | (<<|>>)=? | && | \|\| + | <=> | [!<>=/*%+|&^~-]=? | (\b(and|and_eq|bitand|bitor|compl|not|not_eq|or|or_eq|xor|xor_eq)\...
diff --git a/tests/test_domain_cpp.py b/tests/test_domain_cpp.py --- a/tests/test_domain_cpp.py +++ b/tests/test_domain_cpp.py @@ -289,13 +289,16 @@ class Config: exprCheck('5 == 42', 'eqL5EL42E') exprCheck('5 != 42', 'neL5EL42E') exprCheck('5 not_eq 42', 'neL5EL42E') - # ['<=', '>=', '<', '>'] + #...
["tests/test_domain_cpp.py::test_expressions", "tests/test_domain_cpp.py::test_operators"]
["tests/test_domain_cpp.py::test_fundamental_types", "tests/test_domain_cpp.py::test_type_definitions", "tests/test_domain_cpp.py::test_concept_definitions", "tests/test_domain_cpp.py::test_member_definitions", "tests/test_domain_cpp.py::test_function_definitions", "tests/test_domain_cpp.py::test_nested_name", "tests/t...
null
true
2021-03-02T19:28:19Z
1
6
2
1,290
0
0.8
1
0.55
1
0.235
79.08
9,270
r2e_gym::train::5161
r2e_gym
train
5,161
pyramid__a43abd25858d3e60f525c12da5a271e30a99c4fb
pyramid
pylons/pyramid
python
a43abd25858d3e60f525c12da5a271e30a99c4fb
**Title:** Passing Non-Integer `reissue_time` Causes Type Errors and Validation Failures **Description:** When initializing a cookie session with a string value for the `reissue_time` parameter, unexpected behavior occurs. Specifically, providing a non-integer string leads to type-related errors and prevents proper se...
diff --git a/pyramid/session.py b/pyramid/session.py --- a/pyramid/session.py +++ b/pyramid/session.py @@ -245,7 +245,7 @@ _cookie_httponly = httponly _cookie_on_exception = set_on_exception _timeout = timeout if timeout is None else int(timeout) - _reissue_time = reissue_time + ...
diff --git a/pyramid/tests/test_session.py b/pyramid/tests/test_session.py --- a/pyramid/tests/test_session.py +++ b/pyramid/tests/test_session.py @@ -76,7 +76,6 @@ cookieval = self._serialize((time.time() - 5, 0, {'state': 1})) request.cookies['session'] = cookieval self.assertRaises(ValueEr...
null
null
namanjain12/pyramid_final:a43abd25858d3e60f525c12da5a271e30a99c4fb
true
null
1
3
null
1,341
0
0.75
1
0.75
0.8
0.2335
79.0755
9,271
r2e_gym::train::468
r2e_gym
train
468
orange3__5b67ff8bcc42fd67c7299c88b0be3a181d8596cf
orange3
biolab/orange3
python
5b67ff8bcc42fd67c7299c88b0be3a181d8596cf
**Title:** Crash in Error Delegate When Actual Value is `None` **Description:** When the error delegate attempts to draw a bar with an unknown actual value (`None`), it crashes due to an unhandled case. The method incorrectly tries to evaluate `numpy.isnan(None)`, which is not supported and results in a `TypeError`. ...
diff --git a/Orange/widgets/evaluate/owpredictions.py b/Orange/widgets/evaluate/owpredictions.py --- a/Orange/widgets/evaluate/owpredictions.py +++ b/Orange/widgets/evaluate/owpredictions.py @@ -1124,7 +1124,7 @@ def drawBar(self, painter, option, index, rect): value = self.cachedData(index, Qt.DisplayR...
diff --git a/Orange/widgets/evaluate/tests/test_owpredictions.py b/Orange/widgets/evaluate/tests/test_owpredictions.py --- a/Orange/widgets/evaluate/tests/test_owpredictions.py +++ b/Orange/widgets/evaluate/tests/test_owpredictions.py @@ -1839,6 +1839,10 @@ delegate.drawBar(painter, Mock(), index, rect) ...
null
null
namanjain12/orange3_final:5b67ff8bcc42fd67c7299c88b0be3a181d8596cf
true
null
1
4
null
1,312
0
0.75
1
0.75
0.8
0.232
79.071
9,272
r2e_gym::train::4461
r2e_gym
train
4,461
numpy__0fefb94edf3d30e4336a43df4f36bbf46a018da9
numpy
numpy/numpy
python
0fefb94edf3d30e4336a43df4f36bbf46a018da9
**Title:** Unclear TypeError when operands do not implement `__array_ufunc__` **Description:** When using NumPy universal functions (ufuncs) with custom classes that do not implement the `__array_ufunc__` method, the resulting TypeError message is not sufficiently descriptive. This makes it difficult to understand tha...
diff --git a/numpy/core/_internal.py b/numpy/core/_internal.py --- a/numpy/core/_internal.py +++ b/numpy/core/_internal.py @@ -695,9 +695,10 @@ for k, v in kwargs.items()]) args = inputs + kwargs.get('out', ()) types_string = ', '.join(repr(type(arg).__name__) for arg in args) - ...
diff --git a/numpy/core/tests/test_umath.py b/numpy/core/tests/test_umath.py --- a/numpy/core/tests/test_umath.py +++ b/numpy/core/tests/test_umath.py @@ -1931,14 +1931,14 @@ def __array_ufunc__(self, *args, **kwargs): return NotImplemented - msg = ("operand type(s) do not impleme...
null
null
namanjain12/numpy_final:0fefb94edf3d30e4336a43df4f36bbf46a018da9
true
null
1
5
null
1,288
0
0.75
1
0.75
0.8
0.231333
79.069
9,273
swe_bench::test::1311
swe_bench
test
1,311
pydata__xarray-7347
pydata/xarray
pydata/xarray
python
92e7cb5b21a6dee7f7333c66e41233205c543bc1
assign_coords reset all dimension coords to default (pandas) index ### What happened? See https://github.com/martinfleis/xvec/issues/13#issue-1472023524 ### What did you expect to happen? `assign_coords()` should preserve the index of coordinates that are not updated or not part of a dropped multi-coordinate index. ...
diff --git a/xarray/core/merge.py b/xarray/core/merge.py --- a/xarray/core/merge.py +++ b/xarray/core/merge.py @@ -355,12 +355,12 @@ def append_all(variables, indexes): for name, variable in mapping.items(): if isinstance(variable, DataArray): - coords = variable._coords.copy() #...
diff --git a/xarray/tests/test_dataset.py b/xarray/tests/test_dataset.py --- a/xarray/tests/test_dataset.py +++ b/xarray/tests/test_dataset.py @@ -4170,6 +4170,20 @@ def test_assign_all_multiindex_coords(self) -> None: is not actual.xindexes["level_2"] ) + def test_assign_coords_custom_index_...
["xarray/tests/test_dataset.py::TestDataset::test_assign_coords_custom_index_side_effect"]
["xarray/tests/test_dataset.py::TestDataset::test_repr", "xarray/tests/test_dataset.py::TestDataset::test_repr_multiindex", "xarray/tests/test_dataset.py::TestDataset::test_repr_period_index", "xarray/tests/test_dataset.py::TestDataset::test_unicode_data", "xarray/tests/test_dataset.py::TestDataset::test_repr_nep18", "...
null
true
2022-12-02T08:19:01Z
1
12
1
1,130
0
0.8
1
0.55
1
0.228333
79.06
9,274
swe_bench::test::1176
swe_bench
test
1,176
psf__requests-1888
psf/requests
psf/requests
python
19756d57f73c2062240dd477dd8f8d8a7c0c512a
301 redirect broken with latest pyopenssl/SNI With the latest pyopenssl on Windows 64bit: ``` cryptography==0.2.dev1 ndg-httpsclient==0.3.2 pyOpenSSL==0.13 pyasn1==0.1.7 ``` I get an exception raised when `GET`ing a `301` response to a HTTPS request. I see that after the redirect is received the returned URL is [deco...
diff --git a/requests/sessions.py b/requests/sessions.py --- a/requests/sessions.py +++ b/requests/sessions.py @@ -17,7 +17,7 @@ cookiejar_from_dict, extract_cookies_to_jar, RequestsCookieJar, merge_cookies) from .models import Request, PreparedRequest from .hooks import default_hooks, dispatch_hook -from .utils...
diff --git a/test_requests.py b/test_requests.py --- a/test_requests.py +++ b/test_requests.py @@ -412,6 +412,9 @@ def test_unicode_get(self): def test_unicode_header_name(self): requests.put(httpbin('put'), headers={str('Content-Type'): 'application/octet-stream'}, data='\xff') # compat.str is unicode. ...
["test_requests.py::RequestsTestCase::test_DIGEST_AUTH_SETS_SESSION_COOKIES", "test_requests.py::RequestsTestCase::test_HTTP_200_OK_GET_WITH_MIXED_PARAMS", "test_requests.py::RequestsTestCase::test_cookie_persists_via_api", "test_requests.py::RequestsTestCase::test_params_are_merged_case_sensitive", "test_requests.py::...
["test_requests.py::RequestsTestCase::test_BASICAUTH_TUPLE_HTTP_200_OK_GET", "test_requests.py::RequestsTestCase::test_DIGESTAUTH_QUOTES_QOP_VALUE", "test_requests.py::RequestsTestCase::test_DIGESTAUTH_WRONG_HTTP_401_GET", "test_requests.py::RequestsTestCase::test_DIGEST_HTTP_200_OK_GET", "test_requests.py::RequestsTes...
null
true
2014-01-28T17:18:12Z
1
4
7
2,235
0
0.8
1
0.7
0.8
0.385833
79.0575
9,275
r2e_gym::train::4746
r2e_gym
train
4,746
numpy__8bac6eed123c68560ffdb5d7f7093ad4015a9d85
numpy
numpy/numpy
python
8bac6eed123c68560ffdb5d7f7093ad4015a9d85
**Analysis:** 1. **Key Parts from Commit Details and Test Results:** - **Commit Message Highlights:** - Added commas within `data` and `mask`. - Displayed `dtypes` (e.g., `float32`, `int8`) where previously omitted. - Corrected indentation for wrapped fields. - Removed spaces around `=` to compl...
diff --git a/doc/release/1.14.0-notes.rst b/doc/release/1.14.0-notes.rst --- a/doc/release/1.14.0-notes.rst +++ b/doc/release/1.14.0-notes.rst @@ -503,3 +503,10 @@ ``RandomState`` previously would accept empty arrays or arrays with 2 or more dimensions, which resulted in either a failure to seed (empty arrays) or for...
diff --git a/numpy/ma/tests/test_core.py b/numpy/ma/tests/test_core.py --- a/numpy/ma/tests/test_core.py +++ b/numpy/ma/tests/test_core.py @@ -14,6 +14,7 @@ import operator import itertools import sys +import textwrap from functools import reduce @@ -487,18 +488,95 @@ def test_str_repr(self): a = ...
null
null
namanjain12/numpy_final:8bac6eed123c68560ffdb5d7f7093ad4015a9d85
true
null
2
91
null
2,818
0
0.75
1
0.525
1
0.773
79.0315
9,276
r2e_gym::train::5373
r2e_gym
train
5,373
aiohttp__3c31b3837404fa2fed3cdd42e89f9d6f25c6931e
aiohttp
aio-libs/aiohttp
python
3c31b3837404fa2fed3cdd42e89f9d6f25c6931e
**Title:** Incorrect Error Message When Initializing MultiDict with Excessive Positional Arguments **Description:** When attempting to create a `MultiDict` with more than the allowed number of positional arguments, the raised `TypeError` message inaccurately reports the number of arguments provided. This discrepancy c...
diff --git a/aiohttp/multidict.py b/aiohttp/multidict.py --- a/aiohttp/multidict.py +++ b/aiohttp/multidict.py @@ -15,9 +15,10 @@ def __init__(self, *args, **kwargs): if len(args) > 1: - raise TypeError("MultiDict takes at most 2 positional " - "arguments ({} given)...
diff --git a/tests/test_multidict.py b/tests/test_multidict.py --- a/tests/test_multidict.py +++ b/tests/test_multidict.py @@ -21,7 +21,7 @@ self.assertEqual(list(d.items(getall=True)), []) self.assertNotEqual(self.make_dict(), list()) - with self.assertRaisesRegex(TypeError, "\(3 given\)"): ...
null
null
namanjain12/aiohttp_final:3c31b3837404fa2fed3cdd42e89f9d6f25c6931e
true
null
1
5
null
1,209
0
0.75
1
0.75
0.8
0.218167
79.0295
9,277
r2e_gym::train::363
r2e_gym
train
363
orange3__c4c47757fb51bc8b774fd9232d5ec4e3ab067cdc
orange3
biolab/orange3
python
c4c47757fb51bc8b774fd9232d5ec4e3ab067cdc
**Title:** OWTable Widget: AttributeError When Toggling Row Selection or Variable Labels **Description** When using the OWTable widget, attempting to toggle the "Select Whole Rows" or "Show Variable Labels" options results in an `AttributeError`. This error occurs because the widget incorrectly tries to call the `.val...
diff --git a/Orange/widgets/data/owtable.py b/Orange/widgets/data/owtable.py --- a/Orange/widgets/data/owtable.py +++ b/Orange/widgets/data/owtable.py @@ -593,7 +593,7 @@ def _on_show_variable_labels_changed(self): """The variable labels (var.attribues) visibility was changed.""" - for slot in se...
diff --git a/Orange/widgets/data/tests/test_owtable.py b/Orange/widgets/data/tests/test_owtable.py --- a/Orange/widgets/data/tests/test_owtable.py +++ b/Orange/widgets/data/tests/test_owtable.py @@ -60,7 +60,7 @@ def _select_data(self): self.widget.selected_cols = list(range(len(self.data.domain.variabl...
null
null
namanjain12/orange3_final:c4c47757fb51bc8b774fd9232d5ec4e3ab067cdc
true
null
1
4
null
1,213
0
0.75
1
0.75
0.8
0.2155
79.0215
9,278
swe_bench::test::1871
swe_bench
test
1,871
sphinx-doc__sphinx-9233
sphinx-doc/sphinx
sphinx-doc/sphinx
python
8d87dde43ba0400c46d791e42d9b50bc879cdddb
New hook to customize base list I would like to change the formatting of the base list for classes. Specifially I would like to provide information about parameterized types (e.g. `Dict[str, int`]). See agronholm/sphinx-autodoc-typehints#8 for how I want to use it. For that I need a new hook/event similar to the exist...
diff --git a/sphinx/ext/autodoc/__init__.py b/sphinx/ext/autodoc/__init__.py --- a/sphinx/ext/autodoc/__init__.py +++ b/sphinx/ext/autodoc/__init__.py @@ -1641,18 +1641,23 @@ def add_directive_header(self, sig: str) -> None: # add inheritance info, if wanted if not self.doc_as_attr and self.options....
diff --git a/tests/test_ext_autodoc_autoclass.py b/tests/test_ext_autodoc_autoclass.py --- a/tests/test_ext_autodoc_autoclass.py +++ b/tests/test_ext_autodoc_autoclass.py @@ -10,6 +10,7 @@ """ import sys +from typing import List, Union import pytest @@ -264,6 +265,47 @@ def test_show_inheritance_for_subclass_o...
["tests/test_ext_autodoc_autoclass.py::test_autodoc_process_bases"]
["tests/test_ext_autodoc_autoclass.py::test_classes", "tests/test_ext_autodoc_autoclass.py::test_instance_variable", "tests/test_ext_autodoc_autoclass.py::test_inherited_instance_variable", "tests/test_ext_autodoc_autoclass.py::test_uninitialized_attributes", "tests/test_ext_autodoc_autoclass.py::test_undocumented_unin...
null
true
2021-05-15T15:38:25Z
1
20
1
877
0
0.8
1
0.55
1
0.212833
79.0135
9,279
r2e_gym::train::5233
r2e_gym
train
5,233
pyramid__469f410c38b49b895f4f31de0423be0a4f2de47a
pyramid
pylons/pyramid
python
469f410c38b49b895f4f31de0423be0a4f2de47a
**Title:** RendererHelper Fails to Handle Iterable Responses Due to Missing `app_iter` Attribute **Description:** After updating the renderer to support returning iterables by setting `response.app_iter`, certain response objects do not have the `app_iter` attribute. This leads to an `AttributeError` when the renderer...
diff --git a/pyramid/renderers.py b/pyramid/renderers.py --- a/pyramid/renderers.py +++ b/pyramid/renderers.py @@ -453,6 +453,10 @@ if result is not None: if isinstance(result, text_type): response.text = result + elif isinstance(result, bytes): + respons...
diff --git a/pyramid/tests/test_renderers.py b/pyramid/tests/test_renderers.py --- a/pyramid/tests/test_renderers.py +++ b/pyramid/tests/test_renderers.py @@ -194,8 +194,8 @@ helper = self._makeOne('loo.foo') response = helper.render_to_response('values', {}, ...
null
null
namanjain12/pyramid_final:469f410c38b49b895f4f31de0423be0a4f2de47a
true
null
1
4
null
1,144
0
0.75
1
0.75
0.8
0.204
78.987
9,280
r2e_gym::train::6107
r2e_gym
train
6,107
pillow__af317a696d181bfdbfc28aed44496915a26bc90f
pillow
python-pillow/pillow
python
af317a696d181bfdbfc28aed44496915a26bc90f
**Title:** Missing MP Format Version in MPO Files Causes KeyError When Accessing Metadata **Description:** When saving MPO (Multi-Picture Object) images using the `PIL` library, the MP Format Version metadata is not included in the saved file. This omission leads to a `KeyError` when attempting to access the MP Format...
diff --git a/src/PIL/MpoImagePlugin.py b/src/PIL/MpoImagePlugin.py --- a/src/PIL/MpoImagePlugin.py +++ b/src/PIL/MpoImagePlugin.py @@ -51,7 +51,7 @@ if not offsets: # APP2 marker im.encoderinfo["extra"] = ( - b"\xFF\xE2" + struct.pack(">H", 6 + 70) + b"M...
diff --git a/Tests/test_file_mpo.py b/Tests/test_file_mpo.py --- a/Tests/test_file_mpo.py +++ b/Tests/test_file_mpo.py @@ -268,6 +268,7 @@ im_reloaded = roundtrip(im, save_all=True, append_images=[im2]) assert_image_equal(im, im_reloaded) + assert im_reloaded.mpinfo[45056] == b"0100" im_reloaded.s...
null
null
namanjain12/pillow_final:af317a696d181bfdbfc28aed44496915a26bc90f
true
null
1
3
null
1,153
0
0.75
1
0.75
0.8
0.202167
78.9815
9,281
r2e_gym::train::5520
r2e_gym
train
5,520
aiohttp__e058cbd14dd754c2b0138fdef28df58c5e3a2c5f
aiohttp
aio-libs/aiohttp
python
e058cbd14dd754c2b0138fdef28df58c5e3a2c5f
**Title:** Server Disconnects Instead of Returning 500 Error After "100-Continue" Failure **Description:** When a client sends a request with the `Expect: 100-continue` header and the server handler raises an exception, the server unexpectedly disconnects instead of responding with an appropriate error status. This le...
diff --git a/CHANGES/8876.bugfix.rst b/CHANGES/8876.bugfix.rst --- a/CHANGES/8876.bugfix.rst +++ b/CHANGES/8876.bugfix.rst @@ -0,0 +1 @@ +Fixed error handling after 100-continue so server sends 500 response instead of disconnecting -- by :user:`Dreamsorcerer`. diff --git a/aiohttp/web_urldispatcher.py b/aiohttp/web_url...
diff --git a/tests/test_web_functional.py b/tests/test_web_functional.py --- a/tests/test_web_functional.py +++ b/tests/test_web_functional.py @@ -5,7 +5,7 @@ import pathlib import socket import zlib -from typing import Any, Optional +from typing import Any, NoReturn, Optional from unittest import mock import py...
null
null
namanjain12/aiohttp_final:e058cbd14dd754c2b0138fdef28df58c5e3a2c5f
true
null
2
3
null
1,129
0
0.75
1
0.75
0.8
0.198167
78.9695
9,282
r2e_gym::train::6628
r2e_gym
train
6,628
pillow__e62449f94cc150584c3192061feb3cca7cd5d4c9
pillow
python-pillow/pillow
python
e62449f94cc150584c3192061feb3cca7cd5d4c9
### Operations on Closed Images Raise AttributeError Instead of ValueError **Description** After closing an image, attempting to perform operations like `seek` or accessing attributes such as `is_animated` results in an `AttributeError`. This occurs because the internal file pointer `_fp` is set to `None`, causing sub...
diff --git a/src/PIL/Image.py b/src/PIL/Image.py --- a/src/PIL/Image.py +++ b/src/PIL/Image.py @@ -547,7 +547,7 @@ if getattr(self, "_fp", False): if self._fp != self.fp: self._fp.close() - self._fp = None + self._fp = DeferredError(ValueE...
diff --git a/Tests/test_file_apng.py b/Tests/test_file_apng.py --- a/Tests/test_file_apng.py +++ b/Tests/test_file_apng.py @@ -637,6 +637,15 @@ assert im.getpixel((0, 0)) == (0, 255, 0, 255) +def test_seek_after_close(): + im = Image.open("Tests/images/apng/delay.png") + im.seek(1) + im.close() + ...
null
null
namanjain12/pillow_final:e62449f94cc150584c3192061feb3cca7cd5d4c9
true
null
1
4
null
1,103
0
0.75
1
0.75
0.8
0.197167
78.9665
9,283
swe_bench::test::85
swe_bench
test
85
astropy__astropy-8005
astropy/astropy
astropy/astropy
python
28efbb42ab8ef21b06473be4a2560f1871195efb
Cosmologies used in equivalencies The thermodynamic temperature equivalency appears to default to the Planck 2015 cosmology value: ```python if T_cmb is None: from ..cosmology import Planck15 T_cmb = Planck15.Tcmb0 ``` whereas in the ``with_H0`` equivalency added in https://github.com/astropy/astr...
cc @aconley
diff --git a/astropy/units/equivalencies.py b/astropy/units/equivalencies.py --- a/astropy/units/equivalencies.py +++ b/astropy/units/equivalencies.py @@ -591,8 +591,9 @@ def thermodynamic_temperature(frequency, T_cmb=None): frequency : `~astropy.units.Quantity` with spectral units The observed `spectral`...
diff --git a/astropy/units/tests/test_equivalencies.py b/astropy/units/tests/test_equivalencies.py --- a/astropy/units/tests/test_equivalencies.py +++ b/astropy/units/tests/test_equivalencies.py @@ -582,7 +582,7 @@ def test_beam(): def test_thermodynamic_temperature(): nu = 143 * u.GHz - tb = 0.0026320518775...
["astropy/units/tests/test_equivalencies.py::test_thermodynamic_temperature"]
["astropy/units/tests/test_equivalencies.py::test_dimensionless_angles", "astropy/units/tests/test_equivalencies.py::test_logarithmic[log_unit0]", "astropy/units/tests/test_equivalencies.py::test_logarithmic[log_unit1]", "astropy/units/tests/test_equivalencies.py::test_logarithmic[log_unit2]", "astropy/units/tests/test...
null
true
2018-10-27T15:57:31Z
1
12
1
943
0
0.8
1
0.55
1
0.197167
78.9665
9,284
r2e_gym::train::308
r2e_gym
train
308
orange3__6970fb7dcfeebd2dd1e17ab35673d0b482ddbf03
orange3
biolab/orange3
python
6970fb7dcfeebd2dd1e17ab35673d0b482ddbf03
**Title:** DiscreteVariable.colors Does Not Update Palette Attribute **Description:** When setting the `.colors` attribute of a `DiscreteVariable`, the associated palette does not update accordingly. This leads to inconsistencies where the `palette` attribute does not reflect the current palette name, causing related ...
diff --git a/Orange/widgets/utils/colorpalettes.py b/Orange/widgets/utils/colorpalettes.py --- a/Orange/widgets/utils/colorpalettes.py +++ b/Orange/widgets/utils/colorpalettes.py @@ -651,7 +651,8 @@ nvalues = len(var.values) if var._colors is None or len(var._colors) != nvalues: - set_col...
diff --git a/Orange/widgets/utils/tests/test_colorpalettes.py b/Orange/widgets/utils/tests/test_colorpalettes.py --- a/Orange/widgets/utils/tests/test_colorpalettes.py +++ b/Orange/widgets/utils/tests/test_colorpalettes.py @@ -583,6 +583,8 @@ self.assertEqual(len(colors), 2) for color, palcol in zip(c...
null
null
namanjain12/orange3_final:6970fb7dcfeebd2dd1e17ab35673d0b482ddbf03
true
null
1
3
null
1,103
0
0.75
1
0.75
0.8
0.193833
78.9565
9,285
swe_bench::test::1427
swe_bench
test
1,427
pytest-dev__pytest-7046
pytest-dev/pytest
pytest-dev/pytest
python
d4dfe863c974654fe333eb8368922c96175ede6c
Expressions match against folder structure above pytest root Say I have a test file `/opt/dev/Asdf/pytest_collect/test_issue.py` ```python def test_fdsa(): pass def test_asdf(): pass ``` If I want to match only `test_fdsa`, this works as expected ```bash /opt/dev/Asdf/pytest_collect $ pytest --collectonly -...
diff --git a/src/_pytest/mark/__init__.py b/src/_pytest/mark/__init__.py --- a/src/_pytest/mark/__init__.py +++ b/src/_pytest/mark/__init__.py @@ -136,7 +136,7 @@ def from_item(cls, item: "Item") -> "KeywordMatcher": import pytest for item in item.listchain(): - if not isinstance(item, py...
diff --git a/testing/test_collection.py b/testing/test_collection.py --- a/testing/test_collection.py +++ b/testing/test_collection.py @@ -1004,7 +1004,7 @@ def test_collect_init_tests(testdir): result.stdout.fnmatch_lines( [ "collected 2 items", - "<Package *", + "<Pack...
["testing/test_collection.py::test_collect_init_tests", "testing/test_mark.py::TestKeywordSelection::test_no_match_directories_outside_the_suite"]
["testing/test_collection.py::TestCollector::test_collect_versus_item", "testing/test_collection.py::test_fscollector_from_parent", "testing/test_mark.py::TestMark::test_pytest_exists_in_namespace_all[py.test-mark]", "testing/test_mark.py::TestMark::test_pytest_exists_in_namespace_all[py.test-param]", "testing/test_mar...
null
true
2020-04-08T16:54:35Z
2
5
2
1,986
0
0.8
1
0.7
0.8
0.347667
78.943
9,286
swe_bench::test::953
swe_bench
test
953
matplotlib__matplotlib-14043
matplotlib/matplotlib
matplotlib/matplotlib
python
6e49e89c4a1a3b2e238833bc8935d34b8056304e
bar plot yerr lines/caps should respect zorder ### Bug report **Bug summary** Bar plot error bars break when zorder is greater than 1. ```python fig, ax = plt.subplots(1,1) xm1 = [-2, -1, 0] x = [1, 2, 3] x2 = [4, 5, 6] x3 = [7, 8, 9] y = [1,2,3] yerr = [0.5, 0.5, 0.5] ax.bar(x=xm1, height=y, yerr=yerr, capsize=5, ...
diff --git a/lib/matplotlib/axes/_axes.py b/lib/matplotlib/axes/_axes.py --- a/lib/matplotlib/axes/_axes.py +++ b/lib/matplotlib/axes/_axes.py @@ -2291,6 +2291,14 @@ def bar(self, x, height, width=0.8, bottom=None, *, align="center", xerr = kwargs.pop('xerr', None) yerr = kwargs.pop('yerr', None) ...
diff --git a/lib/matplotlib/tests/test_axes.py b/lib/matplotlib/tests/test_axes.py --- a/lib/matplotlib/tests/test_axes.py +++ b/lib/matplotlib/tests/test_axes.py @@ -6314,3 +6314,18 @@ def test_hist_range_and_density(): range=(0, 1), density=True) assert bins[0] == 0 assert bins[-1...
["lib/matplotlib/tests/test_axes.py::test_bar_errbar_zorder"]
["lib/matplotlib/tests/test_axes.py::test_get_labels", "lib/matplotlib/tests/test_axes.py::test_spy_invalid_kwargs", "lib/matplotlib/tests/test_axes.py::test_twinx_cla", "lib/matplotlib/tests/test_axes.py::test_twinx_axis_scales[png]", "lib/matplotlib/tests/test_axes.py::test_twin_inherit_autoscale_setting", "lib/matpl...
null
true
2019-04-25T20:29:56Z
1
8
1
976
0
0.8
1
0.55
1
0.189333
78.943
9,287
r2e_gym::train::4684
r2e_gym
train
4,684
numpy__be11c06de7cf128c364c33dafbdecd2372f322e6
numpy
numpy/numpy
python
be11c06de7cf128c364c33dafbdecd2372f322e6
**Title:** `np.insert` Raises `TypeError` Instead of `IndexError` for Out-of-Bounds Index **Description** When using `numpy.insert` with a single out-of-bounds index, a `TypeError` is raised instead of the expected `IndexError`. This issue arises due to incorrect formatting of the error message when handling out-of-b...
diff --git a/numpy/lib/function_base.py b/numpy/lib/function_base.py --- a/numpy/lib/function_base.py +++ b/numpy/lib/function_base.py @@ -4753,9 +4753,8 @@ if indices.size == 1: index = indices.item() if index < -N or index > N: - raise IndexError( - "index %i is out of...
diff --git a/numpy/lib/tests/test_function_base.py b/numpy/lib/tests/test_function_base.py --- a/numpy/lib/tests/test_function_base.py +++ b/numpy/lib/tests/test_function_base.py @@ -552,6 +552,11 @@ np.insert([0, 1, 2], np.array([1.0, 2.0]), [10, 20]) with pytest.raises(IndexError): ...
null
null
namanjain12/numpy_final:be11c06de7cf128c364c33dafbdecd2372f322e6
true
null
1
5
null
1,018
0
0.75
1
0.75
0.8
0.186333
78.934
9,288
swe_bench::test::1779
swe_bench
test
1,779
sphinx-doc__sphinx-7597
sphinx-doc/sphinx
sphinx-doc/sphinx
python
c13ecd243709d1e210a030be5aa09b7714e35730
py domain: Change a type annotation for variables to a hyperlink **Is your feature request related to a problem? Please describe.** py domain: Change a type annotation for variables to a hyperlink **Describe the solution you'd like** `type` option was added to python directives since 2.x. But it has been represented ...
diff --git a/sphinx/domains/python.py b/sphinx/domains/python.py --- a/sphinx/domains/python.py +++ b/sphinx/domains/python.py @@ -77,17 +77,19 @@ ('deprecated', bool)]) -def _parse_annotation(annotation: str) -> List[Node]: - """Parse type annotation.""" - def make_x...
diff --git a/tests/test_domain_py.py b/tests/test_domain_py.py --- a/tests/test_domain_py.py +++ b/tests/test_domain_py.py @@ -420,7 +420,8 @@ def test_pydata_signature(app): doctree = restructuredtext.parse(app, text) assert_node(doctree, (addnodes.index, [desc, ([desc_signature, (...
["tests/test_domain_py.py::test_pydata_signature", "tests/test_domain_py.py::test_pyattribute"]
["tests/test_domain_py.py::test_function_signatures", "tests/test_domain_py.py::test_domain_py_xrefs", "tests/test_domain_py.py::test_domain_py_objects", "tests/test_domain_py.py::test_resolve_xref_for_properties", "tests/test_domain_py.py::test_domain_py_find_obj", "tests/test_domain_py.py::test_get_full_qualified_nam...
null
true
2020-05-02T13:44:52Z
1
28
2
523
0
0.8
1
0.55
1
0.1805
78.9165
9,289
r2e_gym::train::4309
r2e_gym
train
4,309
numpy__d2d0dba130b9e4050cc3dac7aa07661d5ce5a033
numpy
numpy/numpy
python
d2d0dba130b9e4050cc3dac7aa07661d5ce5a033
**Title:** TypeError when omitting 'style' argument in `array2string` with `legacy='1.13'` **Description:** When using the `array2string` function in NumPy with the `legacy='1.13'` mode, omitting the `style` argument results in a `TypeError`. This behavior is unexpected because the function should handle the absence o...
diff --git a/numpy/core/arrayprint.py b/numpy/core/arrayprint.py --- a/numpy/core/arrayprint.py +++ b/numpy/core/arrayprint.py @@ -647,6 +647,9 @@ options.update(overrides) if options['legacy'] == '1.13': + if style is np._NoValue: + style = repr + if a.shape == () and not a.dtype...
diff --git a/numpy/core/tests/test_arrayprint.py b/numpy/core/tests/test_arrayprint.py --- a/numpy/core/tests/test_arrayprint.py +++ b/numpy/core/tests/test_arrayprint.py @@ -491,6 +491,8 @@ np.array(1.), style=repr) # but not in legacy mode np.array2string(np...
null
null
namanjain12/numpy_final:d2d0dba130b9e4050cc3dac7aa07661d5ce5a033
true
null
1
3
null
1,006
0
0.75
1
0.75
0.8
0.177667
78.908
9,290
r2e_gym::train::5073
r2e_gym
train
5,073
pyramid__fbbb20c7953370c86f999e865b1a9d682690eb70
pyramid
pylons/pyramid
python
fbbb20c7953370c86f999e865b1a9d682690eb70
**Title:** Unable to Import `testConfig` from `pyramid.testing` After Commit **Description** After introducing the `testConfig` context manager in `pyramid.testing`, attempts to import it in test modules result in an `ImportError`. This prevents tests from utilizing the new context manager for setting up and tearing d...
diff --git a/docs/api/testing.rst b/docs/api/testing.rst --- a/docs/api/testing.rst +++ b/docs/api/testing.rst @@ -8,6 +8,8 @@ .. autofunction:: setUp .. autofunction:: tearDown + + .. autofunction:: testConfig(registry=None, request=None, hook_zca=True, autocommit=True, settings=None) .. autofunction:: c...
diff --git a/pyramid/tests/test_testing.py b/pyramid/tests/test_testing.py --- a/pyramid/tests/test_testing.py +++ b/pyramid/tests/test_testing.py @@ -932,3 +932,58 @@ def __init__(self, kw): self.__dict__.update(kw) +class Test_testConfig(unittest.TestCase): + + def _setUp(self, **kw): + ...
null
null
namanjain12/pyramid_final:fbbb20c7953370c86f999e865b1a9d682690eb70
true
null
3
61
null
896
0.037037
0.75
1
0.6375
1
0.352667
78.904782
9,291
r2e_gym::train::4329
r2e_gym
train
4,329
numpy__2bfec2c0dd92958694e6d736530ae6333d7d62d7
numpy
numpy/numpy
python
2bfec2c0dd92958694e6d736530ae6333d7d62d7
**Title:** Gradient Function Fails with 2D Distance Arrays Instead of Raising ValueError **Description:** When using the `gradient` function with 2D distance arrays, it does not raise a clear `ValueError`. Instead, it results in an unexpected broadcasting error, making it difficult to understand the issue. **Buggy Co...
diff --git a/numpy/lib/function_base.py b/numpy/lib/function_base.py --- a/numpy/lib/function_base.py +++ b/numpy/lib/function_base.py @@ -1697,8 +1697,10 @@ for i, distances in enumerate(dx): if distances.ndim == 0: continue + elif distances.ndim != 1: + ...
diff --git a/numpy/lib/tests/test_function_base.py b/numpy/lib/tests/test_function_base.py --- a/numpy/lib/tests/test_function_base.py +++ b/numpy/lib/tests/test_function_base.py @@ -755,6 +755,10 @@ # 2D but axis specified gradient(f_2d, dx, axis=1) + + # 2d coordinate arguments are not yet ...
null
null
namanjain12/numpy_final:2bfec2c0dd92958694e6d736530ae6333d7d62d7
true
null
1
4
null
960
0
0.75
1
0.75
0.8
0.173333
78.895
9,292
swe_bench::test::1857
swe_bench
test
1,857
sphinx-doc__sphinx-8863
sphinx-doc/sphinx
sphinx-doc/sphinx
python
66aa22f1ea9ef79034812c801432ba152ad96b41
[LaTex] code-block printed out of margin @jfbu this is not handled correctly currently: long hex strings ![Screenshot from 2021-02-07 12-37-17](https://user-images.githubusercontent.com/19870337/107145417-9b0c5700-6941-11eb-86db-89206a3b8a41.png) code: ```` DryGASCON128k56: .. code-block:: shell $ python3 -m drys...
diff --git a/sphinx/writers/latex.py b/sphinx/writers/latex.py --- a/sphinx/writers/latex.py +++ b/sphinx/writers/latex.py @@ -844,11 +844,16 @@ def depart_rubric(self, node: Element) -> None: def visit_footnote(self, node: Element) -> None: self.in_footnote += 1 label = cast(nodes.label, node[0]...
diff --git a/tests/test_build_latex.py b/tests/test_build_latex.py --- a/tests/test_build_latex.py +++ b/tests/test_build_latex.py @@ -723,7 +723,8 @@ def test_footnote(app, status, warning): print(result) print(status.getvalue()) print(warning.getvalue()) - assert ('\\begin{footnote}[1]\\sphinxAtStar...
["tests/test_build_latex.py::test_footnote"]
["tests/test_build_latex.py::test_latex_basic", "tests/test_build_latex.py::test_latex_basic_manual", "tests/test_build_latex.py::test_latex_basic_howto", "tests/test_build_latex.py::test_latex_basic_manual_ja", "tests/test_build_latex.py::test_latex_basic_howto_ja", "tests/test_build_latex.py::test_latex_theme", "test...
null
true
2021-02-09T18:29:09Z
1
9
1
847
0
0.8
1
0.55
1
0.171167
78.8885
9,293
r2e_gym::train::4838
r2e_gym
train
4,838
numpy__86bf869ef831e0f2165a97c057c5661fc8b5dbf7
numpy
numpy/numpy
python
86bf869ef831e0f2165a97c057c5661fc8b5dbf7
**Title:** `apply_along_axis` Raises `StopIteration` Instead of `ValueError` for Empty Arrays **Description:** When using `numpy.apply_along_axis` with an empty array, an internal `StopIteration` exception is raised instead of the expected `ValueError`. This unexpected behavior can lead to unhandled exceptions and mak...
diff --git a/numpy/lib/shape_base.py b/numpy/lib/shape_base.py --- a/numpy/lib/shape_base.py +++ b/numpy/lib/shape_base.py @@ -109,7 +109,10 @@ inds = ndindex(inarr_view.shape[:-1]) # invoke the function on the first item - ind0 = next(inds) + try: + ind0 = next(inds) + except StopIteration:...
diff --git a/numpy/lib/tests/test_shape_base.py b/numpy/lib/tests/test_shape_base.py --- a/numpy/lib/tests/test_shape_base.py +++ b/numpy/lib/tests/test_shape_base.py @@ -140,6 +140,25 @@ res = np.apply_along_axis(sample_1d, 1, np.array([[1, 2], [3, 4]])) assert_array_equal(res, np.array([[2, 1], [4, ...
null
null
namanjain12/numpy_final:86bf869ef831e0f2165a97c057c5661fc8b5dbf7
true
null
1
5
null
922
0
0.75
1
0.75
0.8
0.170333
78.886
9,294
r2e_gym::train::6428
r2e_gym
train
6,428
pillow__c42e6bab1c60c667e997ecde3e90eae074c3b7c3
pillow
python-pillow/pillow
python
c42e6bab1c60c667e997ecde3e90eae074c3b7c3
### SGI Image Saving Fails to Identify Saved Files When saving SGI images to a file pointer, the file pointer is not flushed after writing. This results in incomplete image files that cannot be properly identified or opened. **Steps to Reproduce:** ```python from PIL import Image def save_sgi_image(fp, image): ...
diff --git a/src/PIL/SgiImagePlugin.py b/src/PIL/SgiImagePlugin.py --- a/src/PIL/SgiImagePlugin.py +++ b/src/PIL/SgiImagePlugin.py @@ -193,6 +193,9 @@ for channel in im.split(): fp.write(channel.tobytes("raw", rawmode, 0, orientation)) + if hasattr(fp, "flush"): + fp.flush() + class SGI16De...
diff --git a/Tests/test_file_sgi.py b/Tests/test_file_sgi.py --- a/Tests/test_file_sgi.py +++ b/Tests/test_file_sgi.py @@ -73,6 +73,13 @@ img.save(out, format="sgi") assert_image_equal_tofile(img, out) + out = str(tmp_path / "fp.sgi") + with open(out, "wb") as fp: + img.save...
null
null
namanjain12/pillow_final:c42e6bab1c60c667e997ecde3e90eae074c3b7c3
true
null
1
3
null
927
0
0.75
1
0.75
0.8
0.1645
78.8685
9,295
r2e_gym::train::5837
r2e_gym
train
5,837
tornado__94a5a4027210d082115f96308fd5527cb82b6e33
tornado
tornadoweb/tornado
python
94a5a4027210d082115f96308fd5527cb82b6e33
**Title:** Calling callback without arguments causes TypeError in `@return_future` decorated functions **Description:** When using the `@return_future` decorator, invoking the callback without any arguments results in a `TypeError`. This occurs because the callback expects a `result` argument, and calling it without o...
diff --git a/tornado/concurrent.py b/tornado/concurrent.py --- a/tornado/concurrent.py +++ b/tornado/concurrent.py @@ -153,8 +153,9 @@ @functools.wraps(f) def wrapper(*args, **kwargs): future = Future() - callback, args, kwargs = replacer.replace(future.set_result, - ...
diff --git a/tornado/test/concurrent_test.py b/tornado/test/concurrent_test.py --- a/tornado/test/concurrent_test.py +++ b/tornado/test/concurrent_test.py @@ -52,6 +52,10 @@ # implementations the last event prior to callback resolution wins. return 42 + @return_future + def no_result_future(se...
null
null
namanjain12/tornado_final:94a5a4027210d082115f96308fd5527cb82b6e33
true
null
1
5
null
872
0
0.75
1
0.75
0.8
0.162
78.861
9,296
r2e_gym::train::4531
r2e_gym
train
4,531
numpy__b50d5d01d4790a4383996e885066b1dcb6412526
numpy
numpy/numpy
python
b50d5d01d4790a4383996e885066b1dcb6412526
**Title:** gfortran version detection fails when compiler emits warnings **Description:** When using the GNU Fortran compiler, if it emits warnings before the version string, the version detection process fails to parse the correct version. This results in an error indicating that a valid Fortran version could not be ...
diff --git a/numpy/distutils/fcompiler/gnu.py b/numpy/distutils/fcompiler/gnu.py --- a/numpy/distutils/fcompiler/gnu.py +++ b/numpy/distutils/fcompiler/gnu.py @@ -35,6 +35,10 @@ def gnu_version_match(self, version_string): """Handle the different versions of GNU fortran compilers""" + # Strip war...
diff --git a/numpy/distutils/tests/test_fcompiler_gnu.py b/numpy/distutils/tests/test_fcompiler_gnu.py --- a/numpy/distutils/tests/test_fcompiler_gnu.py +++ b/numpy/distutils/tests/test_fcompiler_gnu.py @@ -16,6 +16,11 @@ gfortran_version_strings = [ ('4.8.0', '4.8.0'), ('4.0.3-7', '4.0.3'), + ("gfortran:...
null
null
namanjain12/numpy_final:b50d5d01d4790a4383996e885066b1dcb6412526
true
null
1
4
null
865
0
0.75
1
0.75
0.8
0.1575
78.8475
9,297
swe_bench::test::1138
swe_bench
test
1,138
mwaskom__seaborn-2979
mwaskom/seaborn
mwaskom/seaborn
python
ebc4bfe9f8bf5c4ff10b14da8a49c8baa1ba76d0
Visibility of internal axis labels is wrong with wrapped pair plot ```python ( so.Plot(mpg, y="mpg") .pair(["displacement", "weight", "horsepower", "cylinders"], wrap=2) ) ``` ![image](https://user-images.githubusercontent.com/315810/186793170-dedae71a-2cb9-4f0e-9339-07fc1d13ac59.png) The top two subplots shou...
diff --git a/seaborn/_core/plot.py b/seaborn/_core/plot.py --- a/seaborn/_core/plot.py +++ b/seaborn/_core/plot.py @@ -943,8 +943,11 @@ def _setup_figure(self, p: Plot, common: PlotData, layers: list[Layer]) -> None: visible_side = {"x": "bottom", "y": "left"}.get(axis) show_axis_label...
diff --git a/tests/_core/test_plot.py b/tests/_core/test_plot.py --- a/tests/_core/test_plot.py +++ b/tests/_core/test_plot.py @@ -1538,8 +1538,10 @@ def test_x_wrapping(self, long_df): assert_gridspec_shape(p._figure.axes[0], len(x_vars) // wrap + 1, wrap) assert len(p._figure.axes) == len(x_vars) ...
["tests/_core/test_plot.py::TestPairInterface::test_x_wrapping", "tests/_core/test_plot.py::TestPairInterface::test_y_wrapping", "tests/_core/test_subplots.py::TestSubplotSpec::test_y_paired_and_wrapped_single_row"]
["tests/_core/test_plot.py::TestInit::test_empty", "tests/_core/test_plot.py::TestInit::test_data_only", "tests/_core/test_plot.py::TestInit::test_df_and_named_variables", "tests/_core/test_plot.py::TestInit::test_df_and_mixed_variables", "tests/_core/test_plot.py::TestInit::test_vector_variables_only", "tests/_core/te...
null
true
2022-08-26T11:07:57Z
2
12
3
693
0
0.8
1
0.55
1
0.1555
78.8415
9,298
swe_bench::test::1175
swe_bench
test
1,175
psf__requests-1776
psf/requests
psf/requests
python
4bceb312f1b99d36a25f2985b5606e98b6f0d8cd
Request cookies should not be persisted to session After the fix for #1630, cookies sent with a request are now incorrectly persisted to the session. Specifically, problem lies here: https://github.com/kennethreitz/requests/blob/1511dfa637643bae5b6111a20ecb80ec9ae26032/requests/sessions.py#L330 Removing that breaks t...
diff --git a/requests/auth.py b/requests/auth.py --- a/requests/auth.py +++ b/requests/auth.py @@ -16,6 +16,7 @@ from base64 import b64encode from .compat import urlparse, str +from .cookies import extract_cookies_to_jar from .utils import parse_dict_header log = logging.getLogger(__name__) @@ -169,7 +170,8 @@ ...
diff --git a/test_requests.py b/test_requests.py --- a/test_requests.py +++ b/test_requests.py @@ -165,7 +165,7 @@ def test_cookie_quote_wrapped(self): def test_cookie_persists_via_api(self): s = requests.session() - r = s.get(httpbin('redirect/1'), cookies={'foo':'bar'}) + r = s.get(httpb...
["test_requests.py::RequestsTestCase::test_DIGEST_AUTH_SETS_SESSION_COOKIES", "test_requests.py::RequestsTestCase::test_request_cookies_not_persisted", "test_requests.py::RequestsTestCase::test_set_cookie_on_301"]
["test_requests.py::RequestsTestCase::test_BASICAUTH_TUPLE_HTTP_200_OK_GET", "test_requests.py::RequestsTestCase::test_DIGESTAUTH_QUOTES_QOP_VALUE", "test_requests.py::RequestsTestCase::test_DIGESTAUTH_WRONG_HTTP_401_GET", "test_requests.py::RequestsTestCase::test_DIGEST_AUTH_RETURNS_COOKIE", "test_requests.py::Request...
null
true
2013-12-04T12:46:50Z
3
26
3
382
0
0.8
1
0.55
1
0.150333
78.826
9,299
r2e_gym::train::5753
r2e_gym
train
5,753
scrapy__6fbd6f941f00037ae4718805352e0fa86a781e41
scrapy
scrapy/scrapy
python
6fbd6f941f00037ae4718805352e0fa86a781e41
**Title:** Initializing ItemLoader with Response Lacking Text Raises AttributeError **Description:** When creating an instance of `ItemLoader` with a `Response` object that does not contain text content, an `AttributeError` is raised instead of handling the scenario gracefully. **Buggy Code Example:** ```python from ...
diff --git a/scrapy/loader/__init__.py b/scrapy/loader/__init__.py --- a/scrapy/loader/__init__.py +++ b/scrapy/loader/__init__.py @@ -83,6 +83,9 @@ def __init__(self, item=None, selector=None, response=None, parent=None, **context): if selector is None and response is not None: - selector = ...
diff --git a/tests/test_loader.py b/tests/test_loader.py --- a/tests/test_loader.py +++ b/tests/test_loader.py @@ -4,7 +4,7 @@ from itemadapter import ItemAdapter from itemloaders.processors import Compose, Identity, MapCompose, TakeFirst -from scrapy.http import HtmlResponse +from scrapy.http import HtmlResponse, ...
null
null
namanjain12/scrapy_final:6fbd6f941f00037ae4718805352e0fa86a781e41
true
null
1
5
null
771
0
0.75
1
0.75
0.8
0.145167
78.8105