Datasets:

HuggingFaceBio
/

clinvar-vep

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Subset (2)

coding · 39.5k rows

Split (1)

test · 39.5k rows

chrom string	pos int64	ref string	alt string	label int64	CADD float64	phyloP-100v float64	phyloP-241m float64	phastCons-100v float64	GPN-MSA float32	NT float64	NT-v2 float64	HyenaDNA float32	Evo2-1B-Base float64	Evo2-7B-Base float64	Evo2-7B float64	GENERator-1B float64	GENERator-3B float64	GENERator-v2-1B float64	GENERator-v2-3B float64	type string	refseq_id string
16	89,740,846	G	C	1	3.998295	2.916	4.219	1	7.300781	0.409986	0.303891	-0.000001	1.73707	2.587732	1.828725	0.490542	5.679598	0.45921	4.50822	coding	NC_000016.10
16	89,742,819	A	G	1	3.441272	3.781	3.558	0.946	7.800781	3.653002	2.231509	-0.000001	1.546463	2.42644	3.926912	4.634343	6.398159	6.412695	6.330503	coding	NC_000016.10
16	89,744,974	C	G	1	1.186032	-1.486	-1.488	0	1.931641	0.921961	0.792588	-0	0.419258	1.105043	1.23302	1.574357	6.789895	2.606849	5.605438	coding	NC_000016.10
16	89,746,853	T	A	1	3.816743	2.23	2.325	1	7.175781	0.111282	0.291603	-0.000001	0.704197	6.65384	6.686873	5.698175	9.95895	7.188742	10.258061	coding	NC_000016.10
16	89,746,889	C	G	1	3.359991	2.163	5.85	1	6.863281	-0.127742	0.146658	0	0.045024	4.001038	4.054025	2.477227	4.62773	4.153675	6.290672	coding	NC_000016.10
16	89,748,678	T	G	1	2.23135	0.124	0.118	0.091	5.039063	-0.171962	-0.331515	-0.000001	-0.264693	0.795146	-0.505285	2.747783	6.263402	3.48591	6.195355	coding	NC_000016.10
16	89,748,725	G	C	1	0.397718	0.365	3.272	0.001	0.926758	0.931113	0.967277	-0.000001	0.430404	1.57411	3.246027	1.443323	7.924939	1.729331	8.943755	coding	NC_000016.10
16	89,748,744	G	A	0	2.080695	2.428	5.816	0.066	4.695313	0.568348	0.868685	-0.000002	1.049822	2.649793	2.799115	0.577377	6.682264	-0.542437	5.959448	coding	NC_000016.10
16	89,749,730	C	A	1	6.245892	3.697	8.833	0.992	8.0625	1.578856	2.797648	0.000001	-0.065813	0.693147	0.57934	0.639302	3.635806	0.547327	1.254888	coding	NC_000016.10
16	89,749,805	C	T	1	3.608682	3.771	8.837	0.99	4.570313	-0.767123	-0.717015	0.000002	-0.990682	0.430783	2.074987	0.712954	5.017366	1.60409	4.570409	coding	NC_000016.10
16	89,761,994	T	C	1	4.091951	4.138	6.25	0.998	6.714844	0.730411	0.521572	0.000001	0.418503	3.516811	5.964685	4.730475	6.739288	5.467268	6.673665	coding	NC_000016.10
16	89,761,995	C	T	1	3.484771	4.086	8.746	1	6.132813	0.255643	-0.020828	0.000001	0.638165	2.768306	5.573348	5.350989	7.219021	5.999518	6.721422	coding	NC_000016.10
16	89,762,007	A	G	1	3.826787	4.844	6.225	1	7.699219	1.202198	0.81215	-0.000003	1.320599	4.551609	3.746166	6.737882	9.255566	5.895501	8.881822	coding	NC_000016.10
16	89,764,945	A	G	1	4.030143	4.993	3.601	0.998	7.773438	-0.620613	0.010962	0.000001	0.588268	0.344012	0.673266	5.136537	7.114992	5.592218	8.030923	coding	NC_000016.10
16	89,765,032	G	A	1	2.704014	5.353	6.977	1	5.371094	0.159306	-0.040514	-0.000002	0.241162	3.585695	3.526668	1.087794	6.834237	1.945765	6.390218	coding	NC_000016.10
16	89,767,215	A	C	1	3.340223	5.38	6.152	1	9.46875	-0.295145	-0.479442	-0.000002	-0.310849	3.304095	-1.213023	4.904604	9.04434	8.197479	8.678329	coding	NC_000016.10
16	89,767,229	G	C	1	2.772401	2.373	4.749	0.934	8.015625	0.411169	0.647653	-0.000001	0.581356	3.77289	0.940388	2.123405	9.12956	4.902776	8.133386	coding	NC_000016.10
16	89,769,891	A	G	1	2.683302	0.237	6.132	0.01	5.332031	-0.884516	-0.91764	-0.000001	-0.521578	-0.16084	-0.622766	3.294532	4.243677	3.599211	5.987693	coding	NC_000016.10
16	89,769,915	C	T	0	1.103537	0.077	1.126	0	-0.046875	1.101073	1.011604	0	0.752236	0.539605	0.995428	0.599443	-1.134159	1.750381	-2.199015	coding	NC_000016.10
16	89,769,979	C	G	1	3.039769	0.406	1.839	0.528	5.867188	0.049798	-0.079077	0	-0.041797	-0.072759	0.044452	0.587275	3.520869	6.252644	9.55088	coding	NC_000016.10
16	89,769,993	C	A	1	3.389977	4.686	8.611	0.997	8.710938	-1.577344	-1.598483	0.000001	-1.350955	-0.722623	-0.580293	-0.694562	10.286843	7.155031	9.873761	coding	NC_000016.10
16	89,770,192	G	A	1	3.283161	1.002	3.286	0.684	5.882813	0.289196	0.002626	-0.000001	0.245335	3.553843	2.876578	-0.064293	3.215989	3.611029	3.449872	coding	NC_000016.10
16	89,770,200	A	T	1	2.785155	2.887	4.437	0.016	5.621094	0.433003	0.622244	0	1.658592	1.841483	-4.242966	0.316197	9.428149	7.003611	9.025723	coding	NC_000016.10
16	89,770,258	G	T	1	4.270096	6.001	8.476	1	8.9375	2.461525	2.181857	-0.000001	2.001983	5.831543	5.521647	4.116147	5.711356	6.230711	7.670155	coding	NC_000016.10
16	89,770,597	A	G	1	4.151254	5.564	4.488	0.999	8.734375	2.423424	1.889146	-0.000001	0.789774	0.400759	2.305248	6.62726	8.117812	6.905452	8.527491	coding	NC_000016.10
16	89,770,616	T	G	1	3.892677	3.253	2.784	1	6.652344	-0.131694	-0.299643	-0.000001	0.00409	3.750248	5.894176	6.870368	9.205414	7.745836	8.63831	coding	NC_000016.10
16	89,771,775	C	G	1	-0.958765	-2.308	-0.479	0	3.369141	0.922173	0.873985	-0.000002	0.899151	0.27559	0.931558	1.95268	7.26952	1.64474	6.301418	coding	NC_000016.10
16	89,773,306	A	G	1	3.511798	4.708	6.152	1	8.007813	2.218497	3.007879	-0.000002	1.991092	2.746613	3.06871	3.751528	9.118637	6.873146	8.686151	coding	NC_000016.10
16	89,773,358	G	C	0	0.038721	0.074	0.453	0	3.494141	0.189085	0.097368	-0.000004	-0.309661	-2.010879	-2.480678	0.406724	4.401896	0.835461	7.042024	coding	NC_000016.10
16	89,778,835	C	T	1	4.068458	5.527	8.631	0.998	7.84375	0.421802	0.410255	-0.000001	0.651183	0.387554	2.194401	6.289351	6.233324	6.228929	5.251614	coding	NC_000016.10
16	89,783,072	C	T	0	-0.282225	-0.965	-1.074	0	-0.012695	-0.00665	-0.330993	0.000003	-1.708845	-3.875209	-3.632057	-4.701334	-4.037303	-4.007763	-4.293261	coding	NC_000016.10
16	89,791,419	T	C	1	4.062933	6.215	6.195	1	6.820313	0.299289	0.310831	0.000002	1.686399	4.144141	5.63963	4.957838	7.50225	3.705551	7.056501	coding	NC_000016.10
16	89,791,527	G	A	0	2.909	4.091	5.643	0.998	3.158203	-2.520982	0.175096	0.000003	-0.699417	2.454926	1.626165	2.025235	4.454592	1.027378	5.330016	coding	NC_000016.10
16	89,791,932	A	C	1	2.491311	7.244	6.23	0.698	9.257813	-0.04178	0.645216	-0.000004	-0.120227	0.86576	1.564986	4.014407	4.569931	3.39275	4.953022	coding	NC_000016.10
16	89,792,067	A	G	1	4.289611	7.244	6.23	1	8.492188	0.315091	0.469826	0.000001	0.315591	6.912054	5.994915	8.170086	9.032265	7.9521	10.010097	coding	NC_000016.10
16	89,792,481	A	C	1	3.750191	6.941	4.608	0.999	9.59375	1.237535	1.342826	-0.000002	1.557359	5.063101	4.877136	6.128689	8.815798	6.563512	9.419106	coding	NC_000016.10
16	89,799,635	T	C	0	0.170149	0.671	3.001	0.056	-3.650391	0.550656	0.512354	-0.000004	-0.022141	0.204953	0.014493	-0.944134	-4.944262	0.574201	-5.66338	coding	NC_000016.10
16	89,805,306	G	C	1	-0.410062	-0.465	-0.555	0	2.511719	0.201954	0.118397	0.000001	-0.027703	-0.073688	-0.067064	-0.603987	4.211635	-0.907625	4.908222	coding	NC_000016.10
16	89,805,360	A	C	1	3.377321	4.589	4.497	0.997	8.546875	0.095639	0.429037	-0	-0.102279	0.107631	0.21387	3.309862	9.563248	7.445547	9.01146	coding	NC_000016.10
16	89,808,294	C	G	1	5.527098	2.552	6.301	1	7.945313	3.018647	1.798718	-0	1.351048	1.156836	1.196906	0.963856	3.002863	1.227811	2.342432	coding	NC_000016.10
16	89,810,759	G	A	1	1.330443	0.675	3.381	0.001	2.255859	-0.652559	0.629757	-0	0.117306	-0.34484	-1.342704	3.904565	5.315825	4.181621	5.203175	coding	NC_000016.10
16	89,816,599	A	T	0	1.288349	-0.16	0.039	0	0.203613	-0.910057	-0.327999	0	-0.486811	-0.324776	-0.428761	0.664152	0.943325	0.447028	-1.140379	coding	NC_000016.10
16	89,816,614	A	C	1	3.275797	1.064	2.104	0.002	1.90625	0.494824	0.164564	0.000003	0.699047	1.588321	1.8549	-0.054206	8.027279	-0.166586	6.278627	coding	NC_000016.10
16	89,816,614	A	G	1	2.790436	1.064	2.104	0.002	1.779297	-1.582176	-2.155338	0.000001	0.085942	0.312375	0.65878	-0.517746	5.296935	0.029734	4.355504	coding	NC_000016.10
16	89,816,615	T	C	1	1.809914	0.666	3.39	0.003	1.608398	0.123362	-0.745349	0.000001	0.940623	2.92531	2.95406	0.312168	5.614931	0.35706	3.248532	coding	NC_000016.10
16	89,816,615	T	G	1	2.010586	0.666	3.39	0.003	1.833984	0.867547	-0.307072	-0.000001	0.7244	3.303646	3.564029	0.94996	6.665436	0.524755	4.126975	coding	NC_000016.10
16	89,919,436	G	T	0	2.722015	3.875	4.773	1	7.425781	1.946513	2.289068	-0.000001	3.773779	5.454743	6.331218	6.879302	6.743571	6.214702	6.23774	coding	NC_000016.10
16	89,919,746	G	A	0	0.941153	1.068	4.324	0.001	2.873047	1.519056	1.474196	-0.000002	3.408577	2.994695	2.966132	3.305498	3.243535	2.107526	2.893552	coding	NC_000016.10
16	89,933,512	G	A	1	4.316924	9.912	8.615	1	8.984375	-0.884344	3.561393	0.000001	6.740077	6.893153	7.644343	8.280593	10.581667	10.283355	10.037312	coding	NC_000016.10
16	89,934,974	G	C	1	3.762545	9.841	0.133	1	11.796875	-0.8272	4.797384	-0.000001	9.607331	8.584829	8.733045	11.432031	11.788682	10.941648	10.83466	coding	NC_000016.10
16	89,935,028	G	A	1	4.306028	9.837	0.133	1	11.796875	0.366923	4.795701	-0	6.184672	7.97684	8.329554	9.078872	10.586255	9.052907	11.150008	coding	NC_000016.10
16	89,935,064	G	A	1	4.471368	9.913	0.133	1	10.453125	2.388354	5.447677	-0	8.353555	8.242543	7.907106	8.672651	12.14557	11.280045	12.074016	coding	NC_000016.10
16	89,935,134	T	C	1	4.44559	7.948	0.11	1	11.9375	3.336064	7.64098	-0	9.63611	8.469316	8.420526	12.112751	13.118221	11.547314	14.02632	coding	NC_000016.10
16	89,935,235	C	T	1	4.181204	4.846	0.134	1	10.242188	1.830121	5.467584	-0.000002	8.825991	8.001097	8.001097	7.922471	10.405836	9.068544	10.301738	coding	NC_000016.10
16	89,935,355	G	A	1	4.266206	9.889	4.735	1	10.25	-1.811637	3.510336	0.000001	8.501651	8.193063	7.922772	8.129568	9.228698	7.943774	8.862636	coding	NC_000016.10
16	89,935,356	C	T	1	3.989582	7.819	8.61	1	10.9375	-0.91991	3.920301	-0.000001	10.212285	8.365775	7.999312	9.573174	11.377512	8.744681	11.823713	coding	NC_000016.10
16	89,935,521	C	T	1	4.094553	7.842	6.864	1	9.546875	1.630937	4.092518	-0	7.837078	7.999312	8.016505	8.581379	10.532503	10.061993	10.623693	coding	NC_000016.10
16	89,935,589	C	T	1	4.354154	2.101	6.884	1	10.164063	0.469459	6.254815	-0.000001	7.812671	7.795245	8.655023	10.853778	7.832056	9.767574	7.780897	coding	NC_000016.10
16	89,935,623	G	T	1	4.566372	9.92	6.774	1	12.375	3.354999	7.343271	-0.000001	10.343963	8.750956	8.800349	11.467306	12.056246	11.770547	11.80662	coding	NC_000016.10
16	89,935,679	G	A	1	4.554357	9.92	6.777	1	11.070313	1.953067	5.507687	0	9.892652	8.132844	8.010741	10.868102	11.768095	9.958866	12.847388	coding	NC_000016.10
16	89,935,700	G	A	1	4.423147	9.92	8.443	1	11.09375	0.93351	3.934629	0.000001	10.061852	8.416206	8.294599	8.31312	10.519871	9.030591	10.816033	coding	NC_000016.10
16	89,935,700	G	C	1	4.345906	9.92	8.443	1	12	1.349535	6.774414	0.000002	11.482241	8.126371	8.515836	11.851149	12.657816	11.71546	13.103163	coding	NC_000016.10
16	89,959,232	G	C	0	-0.562941	-3.781	-0.638	0	-0.495117	-2.179841	-1.978826	-0.000003	1.649284	2.03449	2.36179	2.174626	0.267279	1.99023	-0.464639	coding	NC_000016.10
16	90,058,463	G	T	0	1.532162	4.208	8.279	0.985	8.007813	-0.538466	1.291133	-0.000002	-1.606448	4.682131	4.642861	4.806119	4.904463	3.989897	4.551369	coding	NC_000016.10
16	90,063,728	C	T	0	0.090038	0.447	0.937	0.031	-3.904297	-0.992468	-0.929992	0.000001	-0.89248	-4.233918	-4.163058	-5.056468	-3.790821	-4.473652	-5.958288	coding	NC_000016.10
16	90,074,947	A	C	0	1.918883	0.659	-0.182	0.998	4.449219	0.176716	0.250545	0	0.533517	0.68016	2.414526	6.022187	5.698126	4.332815	6.821828	coding	NC_000016.10
17	137,637	G	A	0	2.250168	-0.045	0.133	0.191	0.601563	1.482605	1.913111	-0.000002	3.023903	3.64307	2.880299	2.821495	4.599011	3.574109	3.814092	coding	NC_000017.11
17	410,508	G	A	0	3.739305	2.522	5.217	0.994	4.960938	1.788993	1.372213	-0.000002	1.140161	1.763104	1.379822	1.114278	1.441762	1.398583	1.343414	coding	NC_000017.11
17	413,503	C	G	0	-1.273821	-10.636	-6.467	0	-0.050781	-7.346751	-6.022639	0.000002	-4.077284	-4.349302	-4.001254	-4.425797	-0.799659	-3.081213	-0.567177	coding	NC_000017.11
17	413,831	A	G	0	-0.028824	-0.603	-3.225	0	-0.119629	-2.38408	-2.749691	-0.000001	-0.17071	-0.857651	-1.143653	-1.147507	-0.519763	-0.743063	-1.154052	coding	NC_000017.11
17	532,843	T	C	1	4.166519	7.57	6.357	1	9.625	0.121294	3.131004	-0.000003	0.107359	0.123937	0.14499	0.891751	0.776621	1.104035	0.607831	coding	NC_000017.11
17	601,889	A	C	0	1.966852	3.038	4.692	0.991	7.523438	0.429155	0.474322	-0.000002	2.506886	5.818357	5.666538	1.497158	2.487672	0.876688	1.459539	coding	NC_000017.11
17	744,946	G	A	0	3.697571	7.333	4.184	1	4.144531	-0.546852	-0.37252	-0	-0.059963	3.119863	3.605702	-1.340931	3.642223	0.211086	2.693556	coding	NC_000017.11
17	745,258	C	T	0	0.571545	1.211	1.416	0.019	-4.074219	0.85661	0.855507	-0.000002	0.520678	-2.02513	-3.62466	-2.140283	-4.876181	-4.53911	-4.852111	coding	NC_000017.11
17	745,827	A	G	0	0.621111	1.093	-0.082	0	1.5	0.090965	0.306153	0.000003	-0.062343	5.871505	6.089229	4.895575	4.336954	4.535327	2.764011	coding	NC_000017.11
17	745,992	C	T	0	-0.478332	0.502	0.144	0	0.587402	-0.903575	-0.811267	0	-1.04694	0.406803	0.47736	0.021191	0.836945	-0.074526	0.246985	coding	NC_000017.11
17	746,265	T	A	0	1.185545	0.014	1.084	0	3.994141	0.425842	0.788181	-0.000001	0.00542	6.000035	6.080198	4.671236	5.365366	5.768719	5.354338	coding	NC_000017.11
17	746,307	G	C	0	3.507323	9.85	8.794	1	9.421875	0.66135	0.911579	-0.000001	3.942908	4.816802	5.257495	7.470184	7.680718	6.589518	8.150727	coding	NC_000017.11
17	747,278	G	A	0	-0.500492	-4.127	-7.815	0	-0.233398	-0.580624	-0.421812	0	-0.319033	0.107098	0.355633	-0.203518	1.899108	-0.371677	1.250139	coding	NC_000017.11
17	747,729	G	A	1	3.978136	9.972	8.796	1	10.070313	0.804362	0.867972	-0.000001	3.871201	7.535007	6.94326	8.33777	9.91409	9.125778	10.034589	coding	NC_000017.11
17	782,400	G	T	0	0.175572	-0.156	-3.648	0	1.558594	1.170808	1.25892	0.000001	1.003302	0.367725	0.176751	0.492836	0.789666	0.737889	0.92435	coding	NC_000017.11
17	782,512	G	A	0	2.447755	1.509	4.916	0.575	3.998047	-0.115297	-0.170221	0.000001	1.165752	4.191406	3.933333	1.595018	4.485509	4.310152	4.145279	coding	NC_000017.11
17	1,031,690	G	T	0	1.323871	3.154	5.442	0.318	5.183594	1.641769	1.46947	-0.000002	0.9002	0.937493	0.73861	0.415858	1.298395	0.333039	1.527668	coding	NC_000017.11
17	1,229,260	C	T	0	1.535072	-0.028	1.875	0.002	-0.782227	-0.204995	-0.251727	0.000001	-0.275706	-0.858742	-1.18734	-0.091221	-0.656608	-0.024143	-0.649223	coding	NC_000017.11
17	1,229,290	C	T	0	0.971025	0.364	5.603	0.004	1.089844	0.706361	0.502672	-0.000003	-0.053621	0.758662	0.715288	0.761772	0.326688	0.646171	0.327325	coding	NC_000017.11
17	1,229,539	G	T	0	1.100099	0.636	3.428	0.001	2.632813	-0.55668	-0.126332	0	-0.176819	-0.648364	-1.472835	-0.536955	-0.702502	-0.052437	-0.754096	coding	NC_000017.11
17	1,270,774	A	G	1	4.308471	7.421	6.159	1	10.867188	0.12098	3.616958	0.000001	5.166524	8.390673	7.971299	6.979311	9.112634	11.701227	9.600748	coding	NC_000017.11
17	1,270,787	G	T	1	4.600407	7.978	8.534	1	11.382813	-2.164993	5.704809	-0	9.593246	8.126371	8.460266	11.821285	10.890385	11.589442	10.108574	coding	NC_000017.11
17	1,280,044	C	T	0	0.098406	-0.158	1.965	0	1.453125	1.177664	1.355189	-0.000001	1.002428	1.066127	0.972319	1.222872	2.039892	1.010254	1.951677	coding	NC_000017.11
17	1,280,060	T	C	0	1.730774	3.726	3.431	0.343	-4.472656	-1.661	-1.441477	0.000001	-1.503216	-1.316227	-0.955077	-1.32678	-1.62801	-1.058908	-3.451213	coding	NC_000017.11
17	1,280,170	A	G	0	1.090181	1.753	5.851	0.982	-3.875	0.42813	0.124543	-0.000003	-2.391816	-3.311002	-2.878414	1.254786	-3.764884	-1.874256	-4.047851	coding	NC_000017.11
17	1,470,224	T	C	0	1.169365	1.404	0.264	0.998	-2.976563	1.15976	0.967998	-0.000001	-2.124292	-4.007582	-2.57346	-4.996999	-4.609992	-1.554618	-5.607501	coding	NC_000017.11
17	1,470,318	C	T	0	1.672681	3.825	4.742	1	-5.535156	-1.163305	-0.680404	0.000002	-4.049546	-3.026277	-5.568988	-2.758045	-5.173556	-3.751532	-5.908613	coding	NC_000017.11
17	1,498,000	T	C	1	3.635895	6.528	6.351	1	6.914063	0.050213	-0.249135	0.000002	6.195433	6.951274	7.846786	4.657418	5.062376	5.108748	5.679848	coding	NC_000017.11
17	1,498,094	C	T	1	4.120133	6.635	8.874	1	7.699219	0.404788	-0.016498	0.000001	7.163443	7.452769	7.506836	5.368495	7.389773	6.103162	7.442016	coding	NC_000017.11
17	1,509,784	T	C	1	2.718705	5.791	6.36	1	5.671875	-0.429122	-0.070566	0.000003	5.813135	6.015972	7.360748	5.699003	2.224903	6.534396	4.561856	coding	NC_000017.11
17	1,513,549	C	A	1	2.980352	0.083	4.994	0.938	5.246094	0.374875	0.659543	-0.000002	2.117421	6.028168	5.141108	1.62888	6.865375	0.635857	6.115944	coding	NC_000017.11
17	1,513,875	A	G	1	3.679779	8.286	6.332	1	8.164063	0.145379	0.014068	0.000002	-0.301105	4.908956	5.056646	4.008594	6.554456	2.292516	7.156414	coding	NC_000017.11
17	1,513,957	C	T	1	2.94667	4.296	5.01	1	4.335938	0.387011	0.596179	-0.000001	3.393992	4.446565	3.528126	5.601785	5.830798	4.573974	5.713406	coding	NC_000017.11
17	1,635,252	C	T	0	0.61137	0.447	1.64	0	2.777344	0.038577	-0.203825	-0.000001	1.920228	2.070473	3.163811	1.497539	7.18208	2.875177	7.914137	coding	NC_000017.11

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