Datasets:

HuggingFaceBio
/

clinvar-vep

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Subset (2)

coding · 39.5k rows

Split (1)

test · 39.5k rows

chrom string	pos int64	ref string	alt string	label int64	CADD float64	phyloP-100v float64	phyloP-241m float64	phastCons-100v float64	GPN-MSA float32	NT float64	NT-v2 float64	HyenaDNA float32	Evo2-1B-Base float64	Evo2-7B-Base float64	Evo2-7B float64	GENERator-1B float64	GENERator-3B float64	GENERator-v2-1B float64	GENERator-v2-3B float64	type string	refseq_id string
19	15,678,288	A	G	0	-0.078894	-1.188	-0.267	0	-1.067383	0.597182	0.144756	0.000001	-0.149345	-1.812127	-0.81229	-1.691244	-1.675189	-1.6823	-0.769977	coding	NC_000019.10
19	15,682,425	C	T	0	2.668541	0.106	1.632	0	1.848633	0.035018	0.356888	0	1.233866	0.491326	0.855942	1.147735	2.479921	1.054836	2.079239	coding	NC_000019.10
19	15,697,074	A	G	0	-0.808641	-2.442	-0.79	0	0.288086	-0.336528	-0.940455	0	-1.164612	-1.881488	-2.559015	-1.84768	-2.791597	-2.205764	-2.572101	coding	NC_000019.10
19	15,728,162	T	A	0	3.086589	0.641	0.204	0.001	5.621094	4.365973	2.884217	-0.000001	6.912054	7.574896	7.442297	7.803047	8.729687	7.069796	8.313889	coding	NC_000019.10
19	15,728,555	C	T	0	1.882685	-0.858	7.893	0	3.308594	3.013333	2.684729	0.000003	3.849266	4.305066	5.024128	4.54616	5.961546	4.19597	5.501379	coding	NC_000019.10
19	15,741,413	A	C	0	0.41719	-1.351	0.244	0	-2.623047	-0.762305	-2.109316	-0.000001	0.274076	0.453784	0.455115	0.026602	0.327364	0.037098	0.251405	coding	NC_000019.10
19	15,741,553	G	A	0	-1.045858	-2.062	-0.52	0	-0.782715	-0.701337	-0.710938	0.000002	-0.250099	-0.570014	-0.480586	-0.456677	-0.343709	-1.488178	-0.583649	coding	NC_000019.10
19	15,742,270	G	A	0	2.802691	1.882	7.872	0.691	5.117188	4.206777	4.708445	-0.000002	5.562877	3.55612	3.673689	3.50944	5.236876	5.151494	4.181532	coding	NC_000019.10
19	15,794,658	T	G	0	2.341197	1.173	4.096	0.001	2.328125	-2.181709	-1.525061	-0.000002	1.063717	3.541402	2.411575	3.626584	6.34902	4.649692	5.717419	coding	NC_000019.10
19	15,794,695	T	C	0	3.000372	2.676	4.136	0.038	5.269531	2.619126	3.889169	-0.000001	5.169009	7.274238	7.20365	6.589308	7.1565	6.248223	6.462987	coding	NC_000019.10
19	15,794,719	C	A	0	2.442785	-0.241	5.144	0	4.394531	3.559261	3.128027	-0	6.426916	5.830062	5.500726	5.204303	6.851058	5.06965	6.801583	coding	NC_000019.10
19	15,807,844	G	A	0	1.291572	1.314	6.475	0.203	4.753906	1.026406	-0.59311	0.000003	2.005675	4.786998	4.263362	1.629284	-1.085814	1.206142	2.026745	coding	NC_000019.10
19	15,807,992	C	G	0	2.214516	1.876	4.306	0.913	6.796875	8.569867	5.858596	0.000003	7.54488	7.719145	8.531154	6.162255	7.016582	7.551009	7.413599	coding	NC_000019.10
19	15,879,621	C	T	0	3.570297	1.681	0.585	0.87	5.1875	0.605283	0.648068	-0.000002	4.752331	4.546437	5.220634	4.260532	4.671546	4.602555	4.865741	coding	NC_000019.10
19	15,897,578	A	C	0	0.007896	-1.285	0.191	0	-0.931641	-0.466015	0.02098	-0.000003	-3.490633	-3.981202	-5.218355	-6.248399	-6.3588	-5.379561	-5.088027	coding	NC_000019.10
19	15,914,366	C	T	0	0.736822	0.456	-2.597	0.077	1.623047	0.320392	0.135695	0.000003	2.208333	3.207162	3.599846	3.869785	2.820076	3.611918	2.195574	coding	NC_000019.10
19	15,923,904	A	G	0	0.210936	0.037	-1.622	0	-1.786133	-0.837806	-0.710835	-0.000002	-1.498212	-2.004018	-1.491655	-3.0859	-1.559606	-2.338966	-1.793017	coding	NC_000019.10
19	15,949,438	A	G	0	0.049202	-1.222	0.326	0	-0.956055	1.441217	1.219219	-0.000001	0.247836	-0.545641	-0.42448	-0.429263	-0.15407	-0.638514	0.48216	coding	NC_000019.10
19	15,949,848	A	G	0	1.397555	1.847	5.694	0.053	3.763672	0.51393	0.852478	0.000002	1.812813	2.250473	2.276722	1.602159	2.843584	4.249989	2.8965	coding	NC_000019.10
19	16,325,451	T	C	0	1.742088	0.813	2.319	0.139	-4.660156	-1.267644	-1.509446	0.000002	-1.897971	-5.138396	-5.126674	-5.151344	-5.608504	-4.067627	-5.583841	coding	NC_000019.10
19	16,731,241	G	T	0	1.638337	0.011	0.705	0.991	3.5625	0.36256	-0.019093	-0.000002	1.146622	3.331626	3.421869	2.111295	3.649372	2.055373	3.454765	coding	NC_000019.10
19	16,749,273	C	T	0	3.037331	3.381	5.859	1	5.539063	0.876839	0.984816	-0.000002	0.688732	3.881251	4.613138	3.372513	3.794833	3.290643	3.638125	coding	NC_000019.10
19	16,749,747	G	A	0	-0.073486	0.783	-0.047	0.49	0.69043	-0.754305	-0.871293	0	0.138836	0.870984	1.235063	1.861935	1.409897	0.113125	1.775257	coding	NC_000019.10
19	16,779,432	C	G	0	0.420495	-0.699	0.303	0	3.695313	-0.958962	-1.547849	0	1.784518	3.905792	4.94734	3.815382	6.09401	4.120985	6.648568	coding	NC_000019.10
19	16,789,054	A	G	0	1.144934	2.975	6.984	0.938	-4.046875	1.598758	1.127057	0.000001	1.65684	1.569475	1.774292	-2.607588	-3.555199	-2.779395	-3.882036	coding	NC_000019.10
19	16,815,256	A	T	0	0.972975	1.939	1.583	0.513	6.441406	0.358991	0.461335	0.000002	0.924259	2.426547	4.101725	5.858912	5.123674	6.224012	5.300746	coding	NC_000019.10
19	16,889,821	G	A	0	0.601141	1.347	2.532	0.003	5.21875	2.795748	4.458256	-0.000004	2.33011	4.588446	4.229015	5.087045	4.034705	5.4058	4.884582	coding	NC_000019.10
19	16,893,238	T	C	0	-0.874866	-1.504	-3.014	0	1.728516	-0.476681	-0.481307	-0.000002	-0.489772	-0.370679	-0.272507	-0.461079	-0.424928	-0.371359	-0.424524	coding	NC_000019.10
19	16,904,267	A	G	1	3.811513	7.332	3.262	1	9.914063	-0.045094	0.178833	0	8.660508	8.109127	8.625409	8.460102	11.572271	8.699047	10.804724	coding	NC_000019.10
19	16,907,068	G	A	0	-0.105696	1.358	-0.85	0.059	0.196289	-1.479841	-1.619644	0.000002	-1.366782	1.084013	0.765468	-3.321386	-1.051502	-3.60722	-0.091616	coding	NC_000019.10
19	16,914,482	G	A	0	2.759033	4.748	2.682	1	5.535156	-0.165908	-0.246882	-0.000001	4.290459	5.201333	5.690111	2.353876	3.672537	2.985839	3.754639	coding	NC_000019.10
19	16,925,277	C	T	0	0.597255	2.309	0.532	1	1.989258	0.045957	-0.023783	0.000002	1.513046	1.420866	1.876317	1.201994	-0.447213	1.174452	-0.97055	coding	NC_000019.10
19	16,970,897	G	T	0	0.596844	1.131	2.245	0.021	0.854492	0.305916	-0.200606	0.000001	-0.119408	-0.02778	-0.04256	0.323942	2.121591	1.544869	3.01316	coding	NC_000019.10
19	16,977,489	T	C	0	-1.782818	-0.457	-2.236	0.001	-1.745117	0.320191	0.165654	-0	-1.704129	0.605235	-0.063988	-1.897369	-1.105791	-1.867584	-0.834813	coding	NC_000019.10
19	16,997,212	C	T	0	1.326097	4.858	4.449	1	3.605469	-0.220093	-0.682366	0.000001	-3.634275	0.481535	-3.304034	0.507781	3.620623	1.883999	2.912789	coding	NC_000019.10
19	16,997,243	C	T	0	-0.840373	-4.488	-5.637	0	2.939453	2.16304	1.706591	-0.000003	0.524207	0.491121	0.066375	0.770075	0.658451	0.940438	0.316313	coding	NC_000019.10
19	16,997,325	C	T	0	0.413695	2.398	-0.095	0.997	-2.054688	-0.684431	-0.423706	0.000001	2.795062	-3.391045	-4.562374	-2.34618	-4.537093	-2.38268	-3.55327	coding	NC_000019.10
19	17,000,487	A	G	0	-0.841917	0.781	-2.291	0.643	-1.333008	2.898145	2.29651	-0.000003	1.420781	-1.483558	-1.125139	-0.670834	-1.646547	-1.559971	-2.347958	coding	NC_000019.10
19	17,194,972	T	G	0	0.168937	-0.161	0.532	0	0.15686	-0.969869	-0.627247	0.000001	-0.360441	1.578185	2.116899	0.648334	2.264992	1.713434	1.753498	coding	NC_000019.10
19	17,205,973	T	C	0	1.035062	1.236	5.843	0.001	-4.273438	0.244689	0.360445	0.000005	2.04683	-3.689905	-3.357102	-1.995785	-2.172692	-1.8458	-2.255124	coding	NC_000019.10
19	17,226,748	G	T	0	2.839941	0.712	1.307	0.002	2.054688	0.914307	0.54628	-0.000004	1.07006	1.087998	1.002764	0.64312	0.727464	0.815394	0.524372	coding	NC_000019.10
19	17,227,073	C	G	0	0.631305	-0.379	1.006	0	1.660156	0.780318	0.787679	0.000001	0.266176	0.442409	0.475424	0.063246	0.0822	0.242437	-0.223452	coding	NC_000019.10
19	17,227,119	C	T	0	0.408246	-0.771	-0.298	0	1.197266	0.783846	0.906343	0.000001	1.271364	1.083777	1.091614	0.838926	2.958012	1.073264	2.715335	coding	NC_000019.10
19	17,250,307	G	A	0	0.951721	0.272	1.417	0.086	2.841797	-0.75015	-0.784895	0.000001	-1.285041	-1.416275	-1.129249	-1.451344	-1.648213	-1.54157	1.054433	coding	NC_000019.10
19	17,255,504	C	T	0	-0.698457	-1.312	-2.966	0	0.62207	1.197546	0.701525	-0.000002	0.405465	2.652924	0.958356	1.703506	-0.346972	1.30369	-2.101831	coding	NC_000019.10
19	17,282,085	G	A	0	3.52614	5.492	8.277	0.865	6.335938	3.87004	3.061707	-0.000002	1.912745	2.792102	3.674341	4.232055	3.063489	3.984709	3.299821	coding	NC_000019.10
19	17,282,206	C	T	0	1.669735	0.345	0.821	0.002	3.089844	0.006965	0.781433	-0.000002	3.219901	1.641641	3.773703	6.397448	3.985632	5.137345	4.572668	coding	NC_000019.10
19	17,282,721	T	A	0	4.056696	6.137	6.083	1	9.695313	1.967	1.729621	0.000001	6.222699	6.992096	6.570102	7.930396	6.838793	7.429595	7.071657	coding	NC_000019.10
19	17,283,315	T	G	0	2.621119	0.985	0.776	0.001	1.625	0.398498	0.006877	0.000004	-0.688507	3.551749	1.598856	-0.573836	2.396241	-0.119492	3.048786	coding	NC_000019.10
19	17,283,695	A	C	0	0.169973	-0.098	0.626	0	-1.404297	-1.006567	-0.72438	0	-0.665748	1.580045	-0.947572	-0.974103	-4.624815	-1.627889	-5.988828	coding	NC_000019.10
19	17,284,194	A	G	0	-1.159918	-0.065	-3.859	0.299	-0.498047	0.963476	0.670161	-0.000003	0.516216	0.980829	0.640349	1.107387	-2.278541	1.447599	-1.919683	coding	NC_000019.10
19	17,286,435	C	T	0	0.687361	0.414	0.444	0.044	3.050781	1.023098	0.833302	-0	1.267904	2.620904	2.079442	2.94127	3.352817	2.90329	3.071397	coding	NC_000019.10
19	17,286,672	G	T	0	0.158542	0.164	0	0.041	3.103516	4.772131	3.764234	-0.000005	3.848728	3.98072	4.342021	4.02344	3.863029	3.948684	4.459204	coding	NC_000019.10
19	17,286,684	G	T	0	-0.045089	-0.223	0	0.001	2.847656	5.055901	3.900388	-0.000005	2.768134	3.019449	3.259179	3.328694	3.469818	3.502688	4.163137	coding	NC_000019.10
19	17,301,409	C	T	0	1.115014	1.55	5.713	0.002	2.875	1.833324	1.701595	0.000002	4.430817	3.108235	3.746747	4.805542	4.517335	4.154229	5.624344	coding	NC_000019.10
19	17,306,271	C	T	0	1.141935	3.542	3.205	1	3.429688	2.132648	1.739764	-0.000002	2.291535	3.234495	3.498526	3.010857	3.543405	2.913344	3.616146	coding	NC_000019.10
19	17,328,511	C	T	0	2.043897	2.217	1.469	0.867	3.984375	0.239482	0.689813	0	2.421993	3.395118	2.541815	4.293383	7.063074	3.459203	6.928456	coding	NC_000019.10
19	17,337,613	T	A	1	3.957049	3.236	4.66	1	7.804688	-0.808932	-0.288427	0.000003	-0.755343	-0.944462	-0.938527	-0.575986	-0.989615	-0.450086	-1.238326	coding	NC_000019.10
19	17,338,152	A	C	0	0.593243	0.474	-0.676	0.996	1.291992	-2.44042	-2.099094	0.000001	-0.870405	-0.18465	0.852448	-1.457772	1.976263	-0.191144	1.690426	coding	NC_000019.10
19	17,338,626	A	T	1	4.613087	8.621	6.251	1	10.242188	1.408524	1.395982	-0.000001	9.719809	9.298595	8.813088	9.396705	9.269633	11.091793	10.219422	coding	NC_000019.10
19	17,339,207	T	C	0	1.465732	1.963	1.017	0.97	-3.324219	-0.992761	-0.216707	0.000001	-1.688028	-4.991202	-4.272212	-3.784996	-6.675335	-3.102205	-7.030131	coding	NC_000019.10
19	17,341,078	G	C	1	4.296501	3.225	6.978	0.999	7.445313	-0.397617	3.549234	-0.000003	6.278491	7.489129	7.950947	8.027588	9.501206	8.728955	10.040844	coding	NC_000019.10
19	17,341,599	G	A	1	4.185643	6.891	8.622	1	8.375	2.890347	2.774799	-0.000003	5.087344	7.140017	6.859607	5.938281	7.922788	7.383171	7.808487	coding	NC_000019.10
19	17,377,188	A	G	1	4.323376	5.97	6.198	1	9.609375	0.892313	1.440131	-0.000001	4.538981	6.516898	5.921655	8.53604	12.189056	8.599272	13.489685	coding	NC_000019.10
19	17,393,955	G	C	0	-1.149058	-1.722	-3.536	0.008	-3.458984	-0.575844	-1.189246	0.000001	-0.827625	-0.770705	-3.180595	-0.867363	-1.706421	2.338975	-3.192825	coding	NC_000019.10
19	17,436,483	A	G	0	-0.47199	0.376	-0.068	0	-0.586914	1.711002	1.051091	0	1.443453	-2.348378	-2.382986	1.651196	0.030162	1.695614	-1.368	coding	NC_000019.10
19	17,448,267	T	C	0	1.226196	-0.027	2.648	0.297	-4.667969	-1.898768	-2.181529	0.000002	-2.235602	-3.31393	-3.469809	-4.119275	-4.902943	-3.938829	-5.954987	coding	NC_000019.10
19	17,455,825	T	A	0	4.356402	7.356	5.985	1	8.429688	0.098534	-0.124602	-0.000001	2.475178	3.496373	5.695352	6.361586	5.280106	6.462926	6.750233	coding	NC_000019.10
19	17,539,420	C	A	0	1.044998	-0.115	0.652	0	3.884766	0.847029	1.71383	-0.000003	2.382628	5.099866	5.938666	4.151289	5.781271	5.418123	5.590311	coding	NC_000019.10
19	17,543,372	C	T	0	0.416424	0.327	0.723	0	1.246094	-0.112722	0.226502	0.000003	0.974398	3.081236	3.264314	3.145421	2.293831	3.187745	1.659819	coding	NC_000019.10
19	17,549,491	G	A	0	1.182441	1.526	1.996	0.026	1.394531	-3.191152	-1.72543	0.000003	-1.701375	-0.060933	-0.099434	-1.190864	1.879463	-1.024235	1.892679	coding	NC_000019.10
19	17,551,807	G	A	0	0.224827	0.878	0.743	0.021	0.022461	-0.414898	-0.828229	0.000002	-1.146745	-0.854014	-0.855666	-1.064615	-0.835189	-1.125515	-0.46728	coding	NC_000019.10
19	17,560,428	T	G	1	4.397654	7.862	6.266	1	11.851563	0.119167	0.027329	0	9.552144	8.642588	8.72128	9.052371	9.51285	9.088163	9.959255	coding	NC_000019.10
19	17,560,436	G	C	1	4.286119	9.852	8.663	1	10.4375	0.546782	0.413044	-0.000003	9.237971	9.499845	9.828703	11.100695	11.755997	12.352231	12.030297	coding	NC_000019.10
19	17,577,463	G	C	1	4.076192	9.564	8.188	1	10.375	2.866015	0.303261	-0.000001	7.403831	8.781539	8.483751	10.004311	7.107195	11.360056	7.332307	coding	NC_000019.10
19	17,656,091	C	T	0	0.056696	-0.268	-0.482	0	2.636719	0.687908	0.744845	-0.000001	1.274255	0.833505	2.039168	2.563871	0.280485	2.496529	-0.443656	coding	NC_000019.10
19	17,726,997	C	A	0	2.294802	1.12	1.701	0.007	3.986328	1.210055	1.265646	0.000001	1.479076	3.774741	1.965739	5.744514	6.164552	5.567381	6.2324	coding	NC_000019.10
19	17,762,834	G	C	1	4.047861	3.358	7.988	1	8.585938	0.182001	-0.144207	0.000001	5.412659	8.158007	7.670176	9.082112	8.42886	9.167982	10.019562	coding	NC_000019.10
19	17,774,461	A	G	0	0.669944	-2.056	-0.649	0.985	-1.175781	0.840358	0.814206	-0.000001	0.447475	2.334788	0.96388	1.259702	0.610583	1.030204	-0.805538	coding	NC_000019.10
19	17,783,115	G	C	1	4.445328	5.947	8.606	1	9.164063	-0.590158	-0.247185	0.000001	8.122199	9.214639	9.922314	12.669367	13.605382	11.192104	11.794575	coding	NC_000019.10
19	17,811,986	G	A	0	0.308266	-0.36	-0.345	0	1.134766	-0.128295	-0.018651	0	-0.521578	1.789458	2.552841	0.25151	1.904639	1.330589	2.327217	coding	NC_000019.10
19	17,816,920	G	C	1	1.967922	1.797	3.251	1	5.878906	0.681551	1.013123	0.000001	1.600164	4.202943	4.835081	0.345986	6.61852	0.68306	7.123051	coding	NC_000019.10
19	17,816,946	G	A	1	0.27018	1.724	4.792	0.025	2.267578	-0.271362	-0.487199	-0.000002	-0.866658	4.927697	5.772313	-0.160545	3.002264	-0.288038	2.772345	coding	NC_000019.10
19	17,816,972	G	A	1	0.677389	-0.149	0.856	0	1.21875	1.096526	0.652019	0.000003	0.883666	2.133754	0.675343	0.581171	4.103402	0.768875	4.552356	coding	NC_000019.10
19	17,821,329	T	C	0	-0.274226	-0.785	0.021	0	-1.233398	-1.209947	-1.080947	0.000002	-0.705493	0.513454	-1.56618	-1.312557	-3.068185	-1.531348	-2.866355	coding	NC_000019.10
19	17,834,571	C	T	1	4.992758	7.428	8.601	1	9.570313	0.975755	2.927616	-0.000003	0.679603	0.641371	1.152357	5.044271	5.988175	4.876061	8.330696	coding	NC_000019.10
19	17,837,150	C	T	1	4.009156	7.197	8.725	1	7.21875	0.665211	3.858445	0.000001	6.40431	7.3005	6.130614	6.656535	6.312969	6.390423	6.573384	coding	NC_000019.10
19	17,842,599	C	T	1	3.059618	2.008	8.679	1	8.101563	0.521331	0.072706	-0.000003	2.206004	6.528635	5.840765	7.413529	6.35812	7.226745	7.374199	coding	NC_000019.10
19	17,843,086	G	T	1	2.831229	1.558	4.811	0.999	7.753906	1.91874	1.674151	-0.000004	3.683308	6.89065	7.078075	7.229021	7.528003	7.373108	7.617087	coding	NC_000019.10
19	17,843,786	T	C	1	3.657649	4.039	6.267	1	7.949219	0.382432	0.267513	0	2.91618	4.608998	7.25387	9.730974	9.652461	8.640196	10.077094	coding	NC_000019.10
19	17,872,596	G	C	1	3.933059	5.353	8.648	1	7.007813	0.716266	0.233947	0.000001	8.690314	9.186201	9.140531	9.683165	11.792997	9.542689	13.731679	coding	NC_000019.10
19	17,881,961	A	C	1	3.958096	8.638	6.185	1	12.242188	-0.329168	-0.516759	0.000002	-0.777309	2.403491	2.450121	5.282747	5.478652	4.720355	2.390547	coding	NC_000019.10
19	17,882,160	G	A	1	4.473627	8.494	8.626	1	7.457031	-0.512399	-0.533673	0.000002	1.386294	5.986575	6.298949	4.707348	6.3407	4.984415	7.927793	coding	NC_000019.10
19	17,883,699	G	A	1	4.47199	9.434	8.446	1	9.078125	1.271949	0.835138	-0.000002	3.230014	6.226629	5.773235	7.138979	10.097177	7.081298	10.404728	coding	NC_000019.10
19	17,888,432	G	A	1	3.271111	6.995	8.48	1	7.875	1.653753	0.556745	-0.000001	7.452978	8.221037	8.638674	9.075529	8.912571	8.856332	8.622858	coding	NC_000019.10
19	18,001,552	C	T	0	2.965168	0.032	0.306	0.025	4.914063	2.753523	3.118857	-0.000001	2.297014	6.238325	5.670632	5.142261	7.346087	6.913591	6.614644	coding	NC_000019.10
19	18,069,641	A	G	0	-0.723431	-0.948	-1.118	0	-0.28125	1.548773	0.805299	0.000001	1.11388	0.361185	-0.57313	1.214691	0.115346	-0.119938	-1.096548	coding	NC_000019.10
19	18,075,808	T	C	0	-0.395971	-0.194	-3.405	0	-0.740234	0.667844	0.250426	-0.000001	-0.166448	-0.394415	-0.672669	1.257825	-0.121009	0.294581	-0.700957	coding	NC_000019.10
19	18,075,812	G	A	1	1.981517	0.2	0.508	0	2.525391	-1.494335	-0.552423	0.000001	0.609182	2.49736	2.090024	1.519	3.928765	1.377472	3.165276	coding	NC_000019.10
19	18,075,814	C	T	1	2.762898	3.245	6.882	0.011	3.210938	-0.35096	0.291428	0.000002	0.351195	2.873774	2.610499	0.585481	4.516299	1.451114	3.873795	coding	NC_000019.10

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