Datasets:
Tighten intro; clarify eukaryote_cls is within-eukaryote
Browse files
README.md
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# GenomeQA
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GenomeQA
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It does not assume a specialized DNA encoder or task-specific model training.
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1. enhancer and promoter identification;
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2. splice-site identification;
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This repository repackages the benchmark introduced in
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[GenomeQA: Benchmarking General Large Language Models for Genome Sequence Understanding](https://huggingface.co/papers/2604.05774)
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([arXiv:2604.05774](https://arxiv.org/abs/2604.05774)) by Weicai Long, Yusen Hou, Junning Feng, Houcheng Su, Shuo
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Yang, Donglin Xie, and Yanlin Zhang
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Parquet, add the subsets listed below, and use it to evaluate Carbon-X.
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The paper constructs GenomeQA from established genomic resources:
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# GenomeQA
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GenomeQA tests whether a general-purpose language model can answer questions about raw nucleotide sequences, with no
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specialised DNA encoder and no task-specific training. Each question is English text containing one or more DNA
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sequences, answerable from signals such as sequence composition, motifs, and motif context.
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5,200 examples — 2,600 binary-choice and 2,600 four-option — with sequences from 6 to 1,000 bp, across six task
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families:
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1. enhancer and promoter identification;
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2. splice-site identification;
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This repository repackages the benchmark introduced in
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[GenomeQA: Benchmarking General Large Language Models for Genome Sequence Understanding](https://huggingface.co/papers/2604.05774)
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([arXiv:2604.05774](https://arxiv.org/abs/2604.05774)) by Weicai Long, Yusen Hou, Junning Feng, Houcheng Su, Shuo
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Yang, Donglin Xie, and Yanlin Zhang, as Parquet with the extra subsets listed below. We use it to evaluate Carbon-X.
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The paper constructs GenomeQA from established genomic resources:
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