Repair cumulative TRACE metadata after chief integration
Browse filesPublish cumulative metadata for models=['chief', 'conch_v1', 'ctranspath', 'gigapath_slide', 'titan', 'uni_v1', 'uni_v2']; repair job 8381184.
- README.md +1 -15
- metadata/h5_validation.parquet +2 -2
- metadata/nested_index.json +155 -0
- metadata/release.json +33 -2
- metadata/shard_manifest.parquet +2 -2
- metadata/slide_registry.parquet +2 -2
README.md
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@@ -994,12 +994,6 @@ configs:
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This repository stores verified TCGA pathology foundation-model embeddings as sharded Parquet files.
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Physical layout:
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```text
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data/{project_id}/{model_name}/{magnification}/part-*.parquet
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```
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## Included release scope
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- Models: chief, conch_v1, ctranspath, gigapath_slide, titan, uni_v1, uni_v2
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- H5 validation rows: 174,761
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- H5 validation failures: 0
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Example streaming load:
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```python
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from datasets import load_dataset
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ds = load_dataset("IUCompPath/TRACE", name="conch_v1_20x", split="TCGA_BRCA", streaming=True)
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```
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This repository stores verified TCGA pathology foundation-model embeddings as sharded Parquet files.
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## Included release scope
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- Models: chief, conch_v1, ctranspath, gigapath_slide, titan, uni_v1, uni_v2
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- H5 validation rows: 174,761
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- H5 validation failures: 0
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Physical layout: data/{project_id}/{model_name}/{magnification}/part-*.parquet
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metadata/h5_validation.parquet
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version https://git-lfs.github.com/spec/v1
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oid sha256:
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size
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version https://git-lfs.github.com/spec/v1
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oid sha256:4bb3a3ca771ae5fa0bcc372358e8fddf0c71087356c3b9305ed78a462a9dc221
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size 12377019
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metadata/nested_index.json
CHANGED
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@@ -1,5 +1,10 @@
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{
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"TCGA-ACC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-ACC/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-BLCA": {
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"conch_v1": {
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"10x": [
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"data/TCGA-BLCA/conch_v1/10x/part-00000.parquet",
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}
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},
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"TCGA-BRCA": {
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"conch_v1": {
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"10x": [
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"data/TCGA-BRCA/conch_v1/10x/part-00000.parquet",
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@@ -651,6 +666,11 @@
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}
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},
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"TCGA-CESC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-CESC/conch_v1/10x/part-00000.parquet"
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@@ -754,6 +774,11 @@
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}
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},
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"TCGA-CHOL": {
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"conch_v1": {
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"10x": [
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"data/TCGA-CHOL/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-COAD": {
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"conch_v1": {
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"10x": [
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"data/TCGA-COAD/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-DLBC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-DLBC/conch_v1/10x/part-00000.parquet"
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@@ -1005,6 +1040,11 @@
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}
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},
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"TCGA-ESCA": {
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"conch_v1": {
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"10x": [
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"data/TCGA-ESCA/conch_v1/10x/part-00000.parquet"
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@@ -1088,6 +1128,11 @@
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}
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},
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"TCGA-GBM": {
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"conch_v1": {
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"10x": [
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"data/TCGA-GBM/conch_v1/10x/part-00000.parquet",
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@@ -1290,6 +1335,11 @@
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}
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},
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"TCGA-HNSC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-HNSC/conch_v1/10x/part-00000.parquet"
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@@ -1436,6 +1486,11 @@
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}
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},
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"TCGA-KICH": {
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"conch_v1": {
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"10x": [
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"data/TCGA-KICH/conch_v1/10x/part-00000.parquet"
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@@ -1518,6 +1573,11 @@
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}
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},
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"TCGA-KIRC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-KIRC/conch_v1/10x/part-00000.parquet",
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}
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},
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"TCGA-KIRP": {
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"conch_v1": {
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"10x": [
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"data/TCGA-KIRP/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-LGG": {
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"conch_v1": {
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"10x": [
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"data/TCGA-LGG/conch_v1/10x/part-00000.parquet",
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}
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},
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"TCGA-LIHC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-LIHC/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-LUAD": {
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"conch_v1": {
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"10x": [
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"data/TCGA-LUAD/conch_v1/10x/part-00000.parquet"
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@@ -2342,6 +2422,11 @@
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}
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},
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"TCGA-LUSC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-LUSC/conch_v1/10x/part-00000.parquet"
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@@ -2506,6 +2591,11 @@
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}
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},
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"TCGA-MESO": {
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"conch_v1": {
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"10x": [
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"data/TCGA-MESO/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-OV": {
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"conch_v1": {
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"10x": [
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"data/TCGA-OV/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-PAAD": {
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"conch_v1": {
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"10x": [
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"data/TCGA-PAAD/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-PCPG": {
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"conch_v1": {
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"10x": [
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"data/TCGA-PCPG/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-PRAD": {
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"conch_v1": {
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"10x": [
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"data/TCGA-PRAD/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-READ": {
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"conch_v1": {
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"10x": [
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"data/TCGA-READ/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-SARC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-SARC/conch_v1/10x/part-00000.parquet",
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}
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},
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"TCGA-SKCM": {
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"conch_v1": {
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"10x": [
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"data/TCGA-SKCM/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-STAD": {
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"conch_v1": {
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"10x": [
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"data/TCGA-STAD/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-THCA": {
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"conch_v1": {
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"10x": [
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"data/TCGA-THCA/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-THYM": {
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"conch_v1": {
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"10x": [
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"data/TCGA-THYM/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-UCEC": {
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"conch_v1": {
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"10x": [
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"data/TCGA-UCEC/conch_v1/10x/part-00000.parquet",
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}
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},
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"TCGA-UCS": {
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"conch_v1": {
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"10x": [
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"data/TCGA-UCS/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-UVM": {
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"conch_v1": {
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"10x": [
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"data/TCGA-UVM/conch_v1/10x/part-00000.parquet"
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{
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"TCGA-ACC": {
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"chief": {
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"10x": [
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"data/TCGA-ACC/chief/10x/part-00000.parquet"
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]
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},
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"conch_v1": {
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"10x": [
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"data/TCGA-ACC/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-BLCA": {
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"chief": {
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"10x": [
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"data/TCGA-BLCA/chief/10x/part-00000.parquet"
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]
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},
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"conch_v1": {
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"10x": [
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"data/TCGA-BLCA/conch_v1/10x/part-00000.parquet",
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}
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},
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"TCGA-BRCA": {
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"chief": {
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"10x": [
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"data/TCGA-BRCA/chief/10x/part-00000.parquet"
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]
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},
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"conch_v1": {
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"10x": [
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"data/TCGA-BRCA/conch_v1/10x/part-00000.parquet",
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}
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},
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"TCGA-CESC": {
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+
"chief": {
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"10x": [
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"data/TCGA-CESC/chief/10x/part-00000.parquet"
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]
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},
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"conch_v1": {
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"10x": [
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"data/TCGA-CESC/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-CHOL": {
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"chief": {
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"10x": [
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"data/TCGA-CHOL/chief/10x/part-00000.parquet"
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]
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},
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"conch_v1": {
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"10x": [
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"data/TCGA-CHOL/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-COAD": {
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"chief": {
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"10x": [
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"data/TCGA-COAD/chief/10x/part-00000.parquet"
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]
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},
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"conch_v1": {
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"10x": [
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"data/TCGA-COAD/conch_v1/10x/part-00000.parquet"
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}
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},
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"TCGA-DLBC": {
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"chief": {
|
| 979 |
+
"10x": [
|
| 980 |
+
"data/TCGA-DLBC/chief/10x/part-00000.parquet"
|
| 981 |
+
]
|
| 982 |
+
},
|
| 983 |
"conch_v1": {
|
| 984 |
"10x": [
|
| 985 |
"data/TCGA-DLBC/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 1040 |
}
|
| 1041 |
},
|
| 1042 |
"TCGA-ESCA": {
|
| 1043 |
+
"chief": {
|
| 1044 |
+
"10x": [
|
| 1045 |
+
"data/TCGA-ESCA/chief/10x/part-00000.parquet"
|
| 1046 |
+
]
|
| 1047 |
+
},
|
| 1048 |
"conch_v1": {
|
| 1049 |
"10x": [
|
| 1050 |
"data/TCGA-ESCA/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 1128 |
}
|
| 1129 |
},
|
| 1130 |
"TCGA-GBM": {
|
| 1131 |
+
"chief": {
|
| 1132 |
+
"10x": [
|
| 1133 |
+
"data/TCGA-GBM/chief/10x/part-00000.parquet"
|
| 1134 |
+
]
|
| 1135 |
+
},
|
| 1136 |
"conch_v1": {
|
| 1137 |
"10x": [
|
| 1138 |
"data/TCGA-GBM/conch_v1/10x/part-00000.parquet",
|
|
|
|
| 1335 |
}
|
| 1336 |
},
|
| 1337 |
"TCGA-HNSC": {
|
| 1338 |
+
"chief": {
|
| 1339 |
+
"10x": [
|
| 1340 |
+
"data/TCGA-HNSC/chief/10x/part-00000.parquet"
|
| 1341 |
+
]
|
| 1342 |
+
},
|
| 1343 |
"conch_v1": {
|
| 1344 |
"10x": [
|
| 1345 |
"data/TCGA-HNSC/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 1486 |
}
|
| 1487 |
},
|
| 1488 |
"TCGA-KICH": {
|
| 1489 |
+
"chief": {
|
| 1490 |
+
"10x": [
|
| 1491 |
+
"data/TCGA-KICH/chief/10x/part-00000.parquet"
|
| 1492 |
+
]
|
| 1493 |
+
},
|
| 1494 |
"conch_v1": {
|
| 1495 |
"10x": [
|
| 1496 |
"data/TCGA-KICH/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 1573 |
}
|
| 1574 |
},
|
| 1575 |
"TCGA-KIRC": {
|
| 1576 |
+
"chief": {
|
| 1577 |
+
"10x": [
|
| 1578 |
+
"data/TCGA-KIRC/chief/10x/part-00000.parquet"
|
| 1579 |
+
]
|
| 1580 |
+
},
|
| 1581 |
"conch_v1": {
|
| 1582 |
"10x": [
|
| 1583 |
"data/TCGA-KIRC/conch_v1/10x/part-00000.parquet",
|
|
|
|
| 1764 |
}
|
| 1765 |
},
|
| 1766 |
"TCGA-KIRP": {
|
| 1767 |
+
"chief": {
|
| 1768 |
+
"10x": [
|
| 1769 |
+
"data/TCGA-KIRP/chief/10x/part-00000.parquet"
|
| 1770 |
+
]
|
| 1771 |
+
},
|
| 1772 |
"conch_v1": {
|
| 1773 |
"10x": [
|
| 1774 |
"data/TCGA-KIRP/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 1891 |
}
|
| 1892 |
},
|
| 1893 |
"TCGA-LGG": {
|
| 1894 |
+
"chief": {
|
| 1895 |
+
"10x": [
|
| 1896 |
+
"data/TCGA-LGG/chief/10x/part-00000.parquet"
|
| 1897 |
+
]
|
| 1898 |
+
},
|
| 1899 |
"conch_v1": {
|
| 1900 |
"10x": [
|
| 1901 |
"data/TCGA-LGG/conch_v1/10x/part-00000.parquet",
|
|
|
|
| 2104 |
}
|
| 2105 |
},
|
| 2106 |
"TCGA-LIHC": {
|
| 2107 |
+
"chief": {
|
| 2108 |
+
"10x": [
|
| 2109 |
+
"data/TCGA-LIHC/chief/10x/part-00000.parquet"
|
| 2110 |
+
]
|
| 2111 |
+
},
|
| 2112 |
"conch_v1": {
|
| 2113 |
"10x": [
|
| 2114 |
"data/TCGA-LIHC/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 2251 |
}
|
| 2252 |
},
|
| 2253 |
"TCGA-LUAD": {
|
| 2254 |
+
"chief": {
|
| 2255 |
+
"10x": [
|
| 2256 |
+
"data/TCGA-LUAD/chief/10x/part-00000.parquet"
|
| 2257 |
+
]
|
| 2258 |
+
},
|
| 2259 |
"conch_v1": {
|
| 2260 |
"10x": [
|
| 2261 |
"data/TCGA-LUAD/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 2422 |
}
|
| 2423 |
},
|
| 2424 |
"TCGA-LUSC": {
|
| 2425 |
+
"chief": {
|
| 2426 |
+
"10x": [
|
| 2427 |
+
"data/TCGA-LUSC/chief/10x/part-00000.parquet"
|
| 2428 |
+
]
|
| 2429 |
+
},
|
| 2430 |
"conch_v1": {
|
| 2431 |
"10x": [
|
| 2432 |
"data/TCGA-LUSC/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 2591 |
}
|
| 2592 |
},
|
| 2593 |
"TCGA-MESO": {
|
| 2594 |
+
"chief": {
|
| 2595 |
+
"10x": [
|
| 2596 |
+
"data/TCGA-MESO/chief/10x/part-00000.parquet"
|
| 2597 |
+
]
|
| 2598 |
+
},
|
| 2599 |
"conch_v1": {
|
| 2600 |
"10x": [
|
| 2601 |
"data/TCGA-MESO/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 2663 |
}
|
| 2664 |
},
|
| 2665 |
"TCGA-OV": {
|
| 2666 |
+
"chief": {
|
| 2667 |
+
"10x": [
|
| 2668 |
+
"data/TCGA-OV/chief/10x/part-00000.parquet"
|
| 2669 |
+
]
|
| 2670 |
+
},
|
| 2671 |
"conch_v1": {
|
| 2672 |
"10x": [
|
| 2673 |
"data/TCGA-OV/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 2747 |
}
|
| 2748 |
},
|
| 2749 |
"TCGA-PAAD": {
|
| 2750 |
+
"chief": {
|
| 2751 |
+
"10x": [
|
| 2752 |
+
"data/TCGA-PAAD/chief/10x/part-00000.parquet"
|
| 2753 |
+
]
|
| 2754 |
+
},
|
| 2755 |
"conch_v1": {
|
| 2756 |
"10x": [
|
| 2757 |
"data/TCGA-PAAD/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 2853 |
}
|
| 2854 |
},
|
| 2855 |
"TCGA-PCPG": {
|
| 2856 |
+
"chief": {
|
| 2857 |
+
"10x": [
|
| 2858 |
+
"data/TCGA-PCPG/chief/10x/part-00000.parquet"
|
| 2859 |
+
]
|
| 2860 |
+
},
|
| 2861 |
"conch_v1": {
|
| 2862 |
"10x": [
|
| 2863 |
"data/TCGA-PCPG/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 2964 |
}
|
| 2965 |
},
|
| 2966 |
"TCGA-PRAD": {
|
| 2967 |
+
"chief": {
|
| 2968 |
+
"10x": [
|
| 2969 |
+
"data/TCGA-PRAD/chief/10x/part-00000.parquet"
|
| 2970 |
+
]
|
| 2971 |
+
},
|
| 2972 |
"conch_v1": {
|
| 2973 |
"10x": [
|
| 2974 |
"data/TCGA-PRAD/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 3126 |
}
|
| 3127 |
},
|
| 3128 |
"TCGA-READ": {
|
| 3129 |
+
"chief": {
|
| 3130 |
+
"10x": [
|
| 3131 |
+
"data/TCGA-READ/chief/10x/part-00000.parquet"
|
| 3132 |
+
]
|
| 3133 |
+
},
|
| 3134 |
"conch_v1": {
|
| 3135 |
"10x": [
|
| 3136 |
"data/TCGA-READ/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 3203 |
}
|
| 3204 |
},
|
| 3205 |
"TCGA-SARC": {
|
| 3206 |
+
"chief": {
|
| 3207 |
+
"10x": [
|
| 3208 |
+
"data/TCGA-SARC/chief/10x/part-00000.parquet"
|
| 3209 |
+
]
|
| 3210 |
+
},
|
| 3211 |
"conch_v1": {
|
| 3212 |
"10x": [
|
| 3213 |
"data/TCGA-SARC/conch_v1/10x/part-00000.parquet",
|
|
|
|
| 3446 |
}
|
| 3447 |
},
|
| 3448 |
"TCGA-SKCM": {
|
| 3449 |
+
"chief": {
|
| 3450 |
+
"10x": [
|
| 3451 |
+
"data/TCGA-SKCM/chief/10x/part-00000.parquet"
|
| 3452 |
+
]
|
| 3453 |
+
},
|
| 3454 |
"conch_v1": {
|
| 3455 |
"10x": [
|
| 3456 |
"data/TCGA-SKCM/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 3629 |
}
|
| 3630 |
},
|
| 3631 |
"TCGA-STAD": {
|
| 3632 |
+
"chief": {
|
| 3633 |
+
"10x": [
|
| 3634 |
+
"data/TCGA-STAD/chief/10x/part-00000.parquet"
|
| 3635 |
+
]
|
| 3636 |
+
},
|
| 3637 |
"conch_v1": {
|
| 3638 |
"10x": [
|
| 3639 |
"data/TCGA-STAD/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 3894 |
}
|
| 3895 |
},
|
| 3896 |
"TCGA-THCA": {
|
| 3897 |
+
"chief": {
|
| 3898 |
+
"10x": [
|
| 3899 |
+
"data/TCGA-THCA/chief/10x/part-00000.parquet"
|
| 3900 |
+
]
|
| 3901 |
+
},
|
| 3902 |
"conch_v1": {
|
| 3903 |
"10x": [
|
| 3904 |
"data/TCGA-THCA/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 4077 |
}
|
| 4078 |
},
|
| 4079 |
"TCGA-THYM": {
|
| 4080 |
+
"chief": {
|
| 4081 |
+
"10x": [
|
| 4082 |
+
"data/TCGA-THYM/chief/10x/part-00000.parquet"
|
| 4083 |
+
]
|
| 4084 |
+
},
|
| 4085 |
"conch_v1": {
|
| 4086 |
"10x": [
|
| 4087 |
"data/TCGA-THYM/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 4188 |
}
|
| 4189 |
},
|
| 4190 |
"TCGA-UCEC": {
|
| 4191 |
+
"chief": {
|
| 4192 |
+
"10x": [
|
| 4193 |
+
"data/TCGA-UCEC/chief/10x/part-00000.parquet"
|
| 4194 |
+
]
|
| 4195 |
+
},
|
| 4196 |
"conch_v1": {
|
| 4197 |
"10x": [
|
| 4198 |
"data/TCGA-UCEC/conch_v1/10x/part-00000.parquet",
|
|
|
|
| 4413 |
}
|
| 4414 |
},
|
| 4415 |
"TCGA-UCS": {
|
| 4416 |
+
"chief": {
|
| 4417 |
+
"10x": [
|
| 4418 |
+
"data/TCGA-UCS/chief/10x/part-00000.parquet"
|
| 4419 |
+
]
|
| 4420 |
+
},
|
| 4421 |
"conch_v1": {
|
| 4422 |
"10x": [
|
| 4423 |
"data/TCGA-UCS/conch_v1/10x/part-00000.parquet"
|
|
|
|
| 4497 |
}
|
| 4498 |
},
|
| 4499 |
"TCGA-UVM": {
|
| 4500 |
+
"chief": {
|
| 4501 |
+
"10x": [
|
| 4502 |
+
"data/TCGA-UVM/chief/10x/part-00000.parquet"
|
| 4503 |
+
]
|
| 4504 |
+
},
|
| 4505 |
"conch_v1": {
|
| 4506 |
"10x": [
|
| 4507 |
"data/TCGA-UVM/conch_v1/10x/part-00000.parquet"
|
metadata/release.json
CHANGED
|
@@ -1,9 +1,10 @@
|
|
| 1 |
{
|
| 2 |
"schema_version": 1,
|
| 3 |
"dataset_version": "v0.1.0-tcga-partial",
|
| 4 |
-
"created_utc": "2026-09-
|
| 5 |
"parent_revision": null,
|
| 6 |
"changed_groups": [
|
|
|
|
| 7 |
"TCGA-ACC/conch_v1/10x",
|
| 8 |
"TCGA-ACC/conch_v1/20x",
|
| 9 |
"TCGA-ACC/conch_v1/5x",
|
|
@@ -18,6 +19,7 @@
|
|
| 18 |
"TCGA-ACC/uni_v2/10x",
|
| 19 |
"TCGA-ACC/uni_v2/20x",
|
| 20 |
"TCGA-ACC/uni_v2/5x",
|
|
|
|
| 21 |
"TCGA-BLCA/conch_v1/10x",
|
| 22 |
"TCGA-BLCA/conch_v1/20x",
|
| 23 |
"TCGA-BLCA/conch_v1/5x",
|
|
@@ -32,6 +34,7 @@
|
|
| 32 |
"TCGA-BLCA/uni_v2/10x",
|
| 33 |
"TCGA-BLCA/uni_v2/20x",
|
| 34 |
"TCGA-BLCA/uni_v2/5x",
|
|
|
|
| 35 |
"TCGA-BRCA/conch_v1/10x",
|
| 36 |
"TCGA-BRCA/conch_v1/20x",
|
| 37 |
"TCGA-BRCA/conch_v1/5x",
|
|
@@ -46,6 +49,7 @@
|
|
| 46 |
"TCGA-BRCA/uni_v2/10x",
|
| 47 |
"TCGA-BRCA/uni_v2/20x",
|
| 48 |
"TCGA-BRCA/uni_v2/5x",
|
|
|
|
| 49 |
"TCGA-CESC/conch_v1/10x",
|
| 50 |
"TCGA-CESC/conch_v1/20x",
|
| 51 |
"TCGA-CESC/conch_v1/5x",
|
|
@@ -60,6 +64,7 @@
|
|
| 60 |
"TCGA-CESC/uni_v2/10x",
|
| 61 |
"TCGA-CESC/uni_v2/20x",
|
| 62 |
"TCGA-CESC/uni_v2/5x",
|
|
|
|
| 63 |
"TCGA-CHOL/conch_v1/10x",
|
| 64 |
"TCGA-CHOL/conch_v1/20x",
|
| 65 |
"TCGA-CHOL/conch_v1/5x",
|
|
@@ -74,6 +79,7 @@
|
|
| 74 |
"TCGA-CHOL/uni_v2/10x",
|
| 75 |
"TCGA-CHOL/uni_v2/20x",
|
| 76 |
"TCGA-CHOL/uni_v2/5x",
|
|
|
|
| 77 |
"TCGA-COAD/conch_v1/10x",
|
| 78 |
"TCGA-COAD/conch_v1/20x",
|
| 79 |
"TCGA-COAD/conch_v1/5x",
|
|
@@ -88,6 +94,7 @@
|
|
| 88 |
"TCGA-COAD/uni_v2/10x",
|
| 89 |
"TCGA-COAD/uni_v2/20x",
|
| 90 |
"TCGA-COAD/uni_v2/5x",
|
|
|
|
| 91 |
"TCGA-DLBC/conch_v1/10x",
|
| 92 |
"TCGA-DLBC/conch_v1/20x",
|
| 93 |
"TCGA-DLBC/conch_v1/5x",
|
|
@@ -102,6 +109,7 @@
|
|
| 102 |
"TCGA-DLBC/uni_v2/10x",
|
| 103 |
"TCGA-DLBC/uni_v2/20x",
|
| 104 |
"TCGA-DLBC/uni_v2/5x",
|
|
|
|
| 105 |
"TCGA-ESCA/conch_v1/10x",
|
| 106 |
"TCGA-ESCA/conch_v1/20x",
|
| 107 |
"TCGA-ESCA/conch_v1/5x",
|
|
@@ -116,6 +124,7 @@
|
|
| 116 |
"TCGA-ESCA/uni_v2/10x",
|
| 117 |
"TCGA-ESCA/uni_v2/20x",
|
| 118 |
"TCGA-ESCA/uni_v2/5x",
|
|
|
|
| 119 |
"TCGA-GBM/conch_v1/10x",
|
| 120 |
"TCGA-GBM/conch_v1/20x",
|
| 121 |
"TCGA-GBM/conch_v1/5x",
|
|
@@ -130,6 +139,7 @@
|
|
| 130 |
"TCGA-GBM/uni_v2/10x",
|
| 131 |
"TCGA-GBM/uni_v2/20x",
|
| 132 |
"TCGA-GBM/uni_v2/5x",
|
|
|
|
| 133 |
"TCGA-HNSC/conch_v1/10x",
|
| 134 |
"TCGA-HNSC/conch_v1/20x",
|
| 135 |
"TCGA-HNSC/conch_v1/5x",
|
|
@@ -144,6 +154,7 @@
|
|
| 144 |
"TCGA-HNSC/uni_v2/10x",
|
| 145 |
"TCGA-HNSC/uni_v2/20x",
|
| 146 |
"TCGA-HNSC/uni_v2/5x",
|
|
|
|
| 147 |
"TCGA-KICH/conch_v1/10x",
|
| 148 |
"TCGA-KICH/conch_v1/20x",
|
| 149 |
"TCGA-KICH/conch_v1/5x",
|
|
@@ -158,6 +169,7 @@
|
|
| 158 |
"TCGA-KICH/uni_v2/10x",
|
| 159 |
"TCGA-KICH/uni_v2/20x",
|
| 160 |
"TCGA-KICH/uni_v2/5x",
|
|
|
|
| 161 |
"TCGA-KIRC/conch_v1/10x",
|
| 162 |
"TCGA-KIRC/conch_v1/20x",
|
| 163 |
"TCGA-KIRC/conch_v1/5x",
|
|
@@ -172,6 +184,7 @@
|
|
| 172 |
"TCGA-KIRC/uni_v2/10x",
|
| 173 |
"TCGA-KIRC/uni_v2/20x",
|
| 174 |
"TCGA-KIRC/uni_v2/5x",
|
|
|
|
| 175 |
"TCGA-KIRP/conch_v1/10x",
|
| 176 |
"TCGA-KIRP/conch_v1/20x",
|
| 177 |
"TCGA-KIRP/conch_v1/5x",
|
|
@@ -186,6 +199,7 @@
|
|
| 186 |
"TCGA-KIRP/uni_v2/10x",
|
| 187 |
"TCGA-KIRP/uni_v2/20x",
|
| 188 |
"TCGA-KIRP/uni_v2/5x",
|
|
|
|
| 189 |
"TCGA-LGG/conch_v1/10x",
|
| 190 |
"TCGA-LGG/conch_v1/20x",
|
| 191 |
"TCGA-LGG/conch_v1/5x",
|
|
@@ -200,6 +214,7 @@
|
|
| 200 |
"TCGA-LGG/uni_v2/10x",
|
| 201 |
"TCGA-LGG/uni_v2/20x",
|
| 202 |
"TCGA-LGG/uni_v2/5x",
|
|
|
|
| 203 |
"TCGA-LIHC/conch_v1/10x",
|
| 204 |
"TCGA-LIHC/conch_v1/20x",
|
| 205 |
"TCGA-LIHC/conch_v1/5x",
|
|
@@ -214,6 +229,7 @@
|
|
| 214 |
"TCGA-LIHC/uni_v2/10x",
|
| 215 |
"TCGA-LIHC/uni_v2/20x",
|
| 216 |
"TCGA-LIHC/uni_v2/5x",
|
|
|
|
| 217 |
"TCGA-LUAD/conch_v1/10x",
|
| 218 |
"TCGA-LUAD/conch_v1/20x",
|
| 219 |
"TCGA-LUAD/conch_v1/5x",
|
|
@@ -228,6 +244,7 @@
|
|
| 228 |
"TCGA-LUAD/uni_v2/10x",
|
| 229 |
"TCGA-LUAD/uni_v2/20x",
|
| 230 |
"TCGA-LUAD/uni_v2/5x",
|
|
|
|
| 231 |
"TCGA-LUSC/conch_v1/10x",
|
| 232 |
"TCGA-LUSC/conch_v1/20x",
|
| 233 |
"TCGA-LUSC/conch_v1/5x",
|
|
@@ -242,6 +259,7 @@
|
|
| 242 |
"TCGA-LUSC/uni_v2/10x",
|
| 243 |
"TCGA-LUSC/uni_v2/20x",
|
| 244 |
"TCGA-LUSC/uni_v2/5x",
|
|
|
|
| 245 |
"TCGA-MESO/conch_v1/10x",
|
| 246 |
"TCGA-MESO/conch_v1/20x",
|
| 247 |
"TCGA-MESO/conch_v1/5x",
|
|
@@ -256,6 +274,7 @@
|
|
| 256 |
"TCGA-MESO/uni_v2/10x",
|
| 257 |
"TCGA-MESO/uni_v2/20x",
|
| 258 |
"TCGA-MESO/uni_v2/5x",
|
|
|
|
| 259 |
"TCGA-OV/conch_v1/10x",
|
| 260 |
"TCGA-OV/conch_v1/20x",
|
| 261 |
"TCGA-OV/conch_v1/5x",
|
|
@@ -270,6 +289,7 @@
|
|
| 270 |
"TCGA-OV/uni_v2/10x",
|
| 271 |
"TCGA-OV/uni_v2/20x",
|
| 272 |
"TCGA-OV/uni_v2/5x",
|
|
|
|
| 273 |
"TCGA-PAAD/conch_v1/10x",
|
| 274 |
"TCGA-PAAD/conch_v1/20x",
|
| 275 |
"TCGA-PAAD/conch_v1/5x",
|
|
@@ -284,6 +304,7 @@
|
|
| 284 |
"TCGA-PAAD/uni_v2/10x",
|
| 285 |
"TCGA-PAAD/uni_v2/20x",
|
| 286 |
"TCGA-PAAD/uni_v2/5x",
|
|
|
|
| 287 |
"TCGA-PCPG/conch_v1/10x",
|
| 288 |
"TCGA-PCPG/conch_v1/20x",
|
| 289 |
"TCGA-PCPG/conch_v1/5x",
|
|
@@ -298,6 +319,7 @@
|
|
| 298 |
"TCGA-PCPG/uni_v2/10x",
|
| 299 |
"TCGA-PCPG/uni_v2/20x",
|
| 300 |
"TCGA-PCPG/uni_v2/5x",
|
|
|
|
| 301 |
"TCGA-PRAD/conch_v1/10x",
|
| 302 |
"TCGA-PRAD/conch_v1/20x",
|
| 303 |
"TCGA-PRAD/conch_v1/5x",
|
|
@@ -312,6 +334,7 @@
|
|
| 312 |
"TCGA-PRAD/uni_v2/10x",
|
| 313 |
"TCGA-PRAD/uni_v2/20x",
|
| 314 |
"TCGA-PRAD/uni_v2/5x",
|
|
|
|
| 315 |
"TCGA-READ/conch_v1/10x",
|
| 316 |
"TCGA-READ/conch_v1/20x",
|
| 317 |
"TCGA-READ/conch_v1/5x",
|
|
@@ -326,6 +349,7 @@
|
|
| 326 |
"TCGA-READ/uni_v2/10x",
|
| 327 |
"TCGA-READ/uni_v2/20x",
|
| 328 |
"TCGA-READ/uni_v2/5x",
|
|
|
|
| 329 |
"TCGA-SARC/conch_v1/10x",
|
| 330 |
"TCGA-SARC/conch_v1/20x",
|
| 331 |
"TCGA-SARC/conch_v1/5x",
|
|
@@ -340,6 +364,7 @@
|
|
| 340 |
"TCGA-SARC/uni_v2/10x",
|
| 341 |
"TCGA-SARC/uni_v2/20x",
|
| 342 |
"TCGA-SARC/uni_v2/5x",
|
|
|
|
| 343 |
"TCGA-SKCM/conch_v1/10x",
|
| 344 |
"TCGA-SKCM/conch_v1/20x",
|
| 345 |
"TCGA-SKCM/conch_v1/5x",
|
|
@@ -354,6 +379,7 @@
|
|
| 354 |
"TCGA-SKCM/uni_v2/10x",
|
| 355 |
"TCGA-SKCM/uni_v2/20x",
|
| 356 |
"TCGA-SKCM/uni_v2/5x",
|
|
|
|
| 357 |
"TCGA-STAD/conch_v1/10x",
|
| 358 |
"TCGA-STAD/conch_v1/20x",
|
| 359 |
"TCGA-STAD/conch_v1/5x",
|
|
@@ -382,6 +408,7 @@
|
|
| 382 |
"TCGA-TGCT/uni_v2/10x",
|
| 383 |
"TCGA-TGCT/uni_v2/20x",
|
| 384 |
"TCGA-TGCT/uni_v2/5x",
|
|
|
|
| 385 |
"TCGA-THCA/conch_v1/10x",
|
| 386 |
"TCGA-THCA/conch_v1/20x",
|
| 387 |
"TCGA-THCA/conch_v1/5x",
|
|
@@ -396,6 +423,7 @@
|
|
| 396 |
"TCGA-THCA/uni_v2/10x",
|
| 397 |
"TCGA-THCA/uni_v2/20x",
|
| 398 |
"TCGA-THCA/uni_v2/5x",
|
|
|
|
| 399 |
"TCGA-THYM/conch_v1/10x",
|
| 400 |
"TCGA-THYM/conch_v1/20x",
|
| 401 |
"TCGA-THYM/conch_v1/5x",
|
|
@@ -410,6 +438,7 @@
|
|
| 410 |
"TCGA-THYM/uni_v2/10x",
|
| 411 |
"TCGA-THYM/uni_v2/20x",
|
| 412 |
"TCGA-THYM/uni_v2/5x",
|
|
|
|
| 413 |
"TCGA-UCEC/conch_v1/10x",
|
| 414 |
"TCGA-UCEC/conch_v1/20x",
|
| 415 |
"TCGA-UCEC/conch_v1/5x",
|
|
@@ -424,6 +453,7 @@
|
|
| 424 |
"TCGA-UCEC/uni_v2/10x",
|
| 425 |
"TCGA-UCEC/uni_v2/20x",
|
| 426 |
"TCGA-UCEC/uni_v2/5x",
|
|
|
|
| 427 |
"TCGA-UCS/conch_v1/10x",
|
| 428 |
"TCGA-UCS/conch_v1/20x",
|
| 429 |
"TCGA-UCS/conch_v1/5x",
|
|
@@ -438,6 +468,7 @@
|
|
| 438 |
"TCGA-UCS/uni_v2/10x",
|
| 439 |
"TCGA-UCS/uni_v2/20x",
|
| 440 |
"TCGA-UCS/uni_v2/5x",
|
|
|
|
| 441 |
"TCGA-UVM/conch_v1/10x",
|
| 442 |
"TCGA-UVM/conch_v1/20x",
|
| 443 |
"TCGA-UVM/conch_v1/5x",
|
|
@@ -453,7 +484,7 @@
|
|
| 453 |
"TCGA-UVM/uni_v2/20x",
|
| 454 |
"TCGA-UVM/uni_v2/5x"
|
| 455 |
],
|
| 456 |
-
"commit_message": "Upload TCGA partial batch:
|
| 457 |
"builder_run_id": null,
|
| 458 |
"source_hashes": {
|
| 459 |
"location": "metadata/h5_validation.parquet",
|
|
|
|
| 1 |
{
|
| 2 |
"schema_version": 1,
|
| 3 |
"dataset_version": "v0.1.0-tcga-partial",
|
| 4 |
+
"created_utc": "2026-09-30T18:32:55.899269+00:00",
|
| 5 |
"parent_revision": null,
|
| 6 |
"changed_groups": [
|
| 7 |
+
"TCGA-ACC/chief/10x",
|
| 8 |
"TCGA-ACC/conch_v1/10x",
|
| 9 |
"TCGA-ACC/conch_v1/20x",
|
| 10 |
"TCGA-ACC/conch_v1/5x",
|
|
|
|
| 19 |
"TCGA-ACC/uni_v2/10x",
|
| 20 |
"TCGA-ACC/uni_v2/20x",
|
| 21 |
"TCGA-ACC/uni_v2/5x",
|
| 22 |
+
"TCGA-BLCA/chief/10x",
|
| 23 |
"TCGA-BLCA/conch_v1/10x",
|
| 24 |
"TCGA-BLCA/conch_v1/20x",
|
| 25 |
"TCGA-BLCA/conch_v1/5x",
|
|
|
|
| 34 |
"TCGA-BLCA/uni_v2/10x",
|
| 35 |
"TCGA-BLCA/uni_v2/20x",
|
| 36 |
"TCGA-BLCA/uni_v2/5x",
|
| 37 |
+
"TCGA-BRCA/chief/10x",
|
| 38 |
"TCGA-BRCA/conch_v1/10x",
|
| 39 |
"TCGA-BRCA/conch_v1/20x",
|
| 40 |
"TCGA-BRCA/conch_v1/5x",
|
|
|
|
| 49 |
"TCGA-BRCA/uni_v2/10x",
|
| 50 |
"TCGA-BRCA/uni_v2/20x",
|
| 51 |
"TCGA-BRCA/uni_v2/5x",
|
| 52 |
+
"TCGA-CESC/chief/10x",
|
| 53 |
"TCGA-CESC/conch_v1/10x",
|
| 54 |
"TCGA-CESC/conch_v1/20x",
|
| 55 |
"TCGA-CESC/conch_v1/5x",
|
|
|
|
| 64 |
"TCGA-CESC/uni_v2/10x",
|
| 65 |
"TCGA-CESC/uni_v2/20x",
|
| 66 |
"TCGA-CESC/uni_v2/5x",
|
| 67 |
+
"TCGA-CHOL/chief/10x",
|
| 68 |
"TCGA-CHOL/conch_v1/10x",
|
| 69 |
"TCGA-CHOL/conch_v1/20x",
|
| 70 |
"TCGA-CHOL/conch_v1/5x",
|
|
|
|
| 79 |
"TCGA-CHOL/uni_v2/10x",
|
| 80 |
"TCGA-CHOL/uni_v2/20x",
|
| 81 |
"TCGA-CHOL/uni_v2/5x",
|
| 82 |
+
"TCGA-COAD/chief/10x",
|
| 83 |
"TCGA-COAD/conch_v1/10x",
|
| 84 |
"TCGA-COAD/conch_v1/20x",
|
| 85 |
"TCGA-COAD/conch_v1/5x",
|
|
|
|
| 94 |
"TCGA-COAD/uni_v2/10x",
|
| 95 |
"TCGA-COAD/uni_v2/20x",
|
| 96 |
"TCGA-COAD/uni_v2/5x",
|
| 97 |
+
"TCGA-DLBC/chief/10x",
|
| 98 |
"TCGA-DLBC/conch_v1/10x",
|
| 99 |
"TCGA-DLBC/conch_v1/20x",
|
| 100 |
"TCGA-DLBC/conch_v1/5x",
|
|
|
|
| 109 |
"TCGA-DLBC/uni_v2/10x",
|
| 110 |
"TCGA-DLBC/uni_v2/20x",
|
| 111 |
"TCGA-DLBC/uni_v2/5x",
|
| 112 |
+
"TCGA-ESCA/chief/10x",
|
| 113 |
"TCGA-ESCA/conch_v1/10x",
|
| 114 |
"TCGA-ESCA/conch_v1/20x",
|
| 115 |
"TCGA-ESCA/conch_v1/5x",
|
|
|
|
| 124 |
"TCGA-ESCA/uni_v2/10x",
|
| 125 |
"TCGA-ESCA/uni_v2/20x",
|
| 126 |
"TCGA-ESCA/uni_v2/5x",
|
| 127 |
+
"TCGA-GBM/chief/10x",
|
| 128 |
"TCGA-GBM/conch_v1/10x",
|
| 129 |
"TCGA-GBM/conch_v1/20x",
|
| 130 |
"TCGA-GBM/conch_v1/5x",
|
|
|
|
| 139 |
"TCGA-GBM/uni_v2/10x",
|
| 140 |
"TCGA-GBM/uni_v2/20x",
|
| 141 |
"TCGA-GBM/uni_v2/5x",
|
| 142 |
+
"TCGA-HNSC/chief/10x",
|
| 143 |
"TCGA-HNSC/conch_v1/10x",
|
| 144 |
"TCGA-HNSC/conch_v1/20x",
|
| 145 |
"TCGA-HNSC/conch_v1/5x",
|
|
|
|
| 154 |
"TCGA-HNSC/uni_v2/10x",
|
| 155 |
"TCGA-HNSC/uni_v2/20x",
|
| 156 |
"TCGA-HNSC/uni_v2/5x",
|
| 157 |
+
"TCGA-KICH/chief/10x",
|
| 158 |
"TCGA-KICH/conch_v1/10x",
|
| 159 |
"TCGA-KICH/conch_v1/20x",
|
| 160 |
"TCGA-KICH/conch_v1/5x",
|
|
|
|
| 169 |
"TCGA-KICH/uni_v2/10x",
|
| 170 |
"TCGA-KICH/uni_v2/20x",
|
| 171 |
"TCGA-KICH/uni_v2/5x",
|
| 172 |
+
"TCGA-KIRC/chief/10x",
|
| 173 |
"TCGA-KIRC/conch_v1/10x",
|
| 174 |
"TCGA-KIRC/conch_v1/20x",
|
| 175 |
"TCGA-KIRC/conch_v1/5x",
|
|
|
|
| 184 |
"TCGA-KIRC/uni_v2/10x",
|
| 185 |
"TCGA-KIRC/uni_v2/20x",
|
| 186 |
"TCGA-KIRC/uni_v2/5x",
|
| 187 |
+
"TCGA-KIRP/chief/10x",
|
| 188 |
"TCGA-KIRP/conch_v1/10x",
|
| 189 |
"TCGA-KIRP/conch_v1/20x",
|
| 190 |
"TCGA-KIRP/conch_v1/5x",
|
|
|
|
| 199 |
"TCGA-KIRP/uni_v2/10x",
|
| 200 |
"TCGA-KIRP/uni_v2/20x",
|
| 201 |
"TCGA-KIRP/uni_v2/5x",
|
| 202 |
+
"TCGA-LGG/chief/10x",
|
| 203 |
"TCGA-LGG/conch_v1/10x",
|
| 204 |
"TCGA-LGG/conch_v1/20x",
|
| 205 |
"TCGA-LGG/conch_v1/5x",
|
|
|
|
| 214 |
"TCGA-LGG/uni_v2/10x",
|
| 215 |
"TCGA-LGG/uni_v2/20x",
|
| 216 |
"TCGA-LGG/uni_v2/5x",
|
| 217 |
+
"TCGA-LIHC/chief/10x",
|
| 218 |
"TCGA-LIHC/conch_v1/10x",
|
| 219 |
"TCGA-LIHC/conch_v1/20x",
|
| 220 |
"TCGA-LIHC/conch_v1/5x",
|
|
|
|
| 229 |
"TCGA-LIHC/uni_v2/10x",
|
| 230 |
"TCGA-LIHC/uni_v2/20x",
|
| 231 |
"TCGA-LIHC/uni_v2/5x",
|
| 232 |
+
"TCGA-LUAD/chief/10x",
|
| 233 |
"TCGA-LUAD/conch_v1/10x",
|
| 234 |
"TCGA-LUAD/conch_v1/20x",
|
| 235 |
"TCGA-LUAD/conch_v1/5x",
|
|
|
|
| 244 |
"TCGA-LUAD/uni_v2/10x",
|
| 245 |
"TCGA-LUAD/uni_v2/20x",
|
| 246 |
"TCGA-LUAD/uni_v2/5x",
|
| 247 |
+
"TCGA-LUSC/chief/10x",
|
| 248 |
"TCGA-LUSC/conch_v1/10x",
|
| 249 |
"TCGA-LUSC/conch_v1/20x",
|
| 250 |
"TCGA-LUSC/conch_v1/5x",
|
|
|
|
| 259 |
"TCGA-LUSC/uni_v2/10x",
|
| 260 |
"TCGA-LUSC/uni_v2/20x",
|
| 261 |
"TCGA-LUSC/uni_v2/5x",
|
| 262 |
+
"TCGA-MESO/chief/10x",
|
| 263 |
"TCGA-MESO/conch_v1/10x",
|
| 264 |
"TCGA-MESO/conch_v1/20x",
|
| 265 |
"TCGA-MESO/conch_v1/5x",
|
|
|
|
| 274 |
"TCGA-MESO/uni_v2/10x",
|
| 275 |
"TCGA-MESO/uni_v2/20x",
|
| 276 |
"TCGA-MESO/uni_v2/5x",
|
| 277 |
+
"TCGA-OV/chief/10x",
|
| 278 |
"TCGA-OV/conch_v1/10x",
|
| 279 |
"TCGA-OV/conch_v1/20x",
|
| 280 |
"TCGA-OV/conch_v1/5x",
|
|
|
|
| 289 |
"TCGA-OV/uni_v2/10x",
|
| 290 |
"TCGA-OV/uni_v2/20x",
|
| 291 |
"TCGA-OV/uni_v2/5x",
|
| 292 |
+
"TCGA-PAAD/chief/10x",
|
| 293 |
"TCGA-PAAD/conch_v1/10x",
|
| 294 |
"TCGA-PAAD/conch_v1/20x",
|
| 295 |
"TCGA-PAAD/conch_v1/5x",
|
|
|
|
| 304 |
"TCGA-PAAD/uni_v2/10x",
|
| 305 |
"TCGA-PAAD/uni_v2/20x",
|
| 306 |
"TCGA-PAAD/uni_v2/5x",
|
| 307 |
+
"TCGA-PCPG/chief/10x",
|
| 308 |
"TCGA-PCPG/conch_v1/10x",
|
| 309 |
"TCGA-PCPG/conch_v1/20x",
|
| 310 |
"TCGA-PCPG/conch_v1/5x",
|
|
|
|
| 319 |
"TCGA-PCPG/uni_v2/10x",
|
| 320 |
"TCGA-PCPG/uni_v2/20x",
|
| 321 |
"TCGA-PCPG/uni_v2/5x",
|
| 322 |
+
"TCGA-PRAD/chief/10x",
|
| 323 |
"TCGA-PRAD/conch_v1/10x",
|
| 324 |
"TCGA-PRAD/conch_v1/20x",
|
| 325 |
"TCGA-PRAD/conch_v1/5x",
|
|
|
|
| 334 |
"TCGA-PRAD/uni_v2/10x",
|
| 335 |
"TCGA-PRAD/uni_v2/20x",
|
| 336 |
"TCGA-PRAD/uni_v2/5x",
|
| 337 |
+
"TCGA-READ/chief/10x",
|
| 338 |
"TCGA-READ/conch_v1/10x",
|
| 339 |
"TCGA-READ/conch_v1/20x",
|
| 340 |
"TCGA-READ/conch_v1/5x",
|
|
|
|
| 349 |
"TCGA-READ/uni_v2/10x",
|
| 350 |
"TCGA-READ/uni_v2/20x",
|
| 351 |
"TCGA-READ/uni_v2/5x",
|
| 352 |
+
"TCGA-SARC/chief/10x",
|
| 353 |
"TCGA-SARC/conch_v1/10x",
|
| 354 |
"TCGA-SARC/conch_v1/20x",
|
| 355 |
"TCGA-SARC/conch_v1/5x",
|
|
|
|
| 364 |
"TCGA-SARC/uni_v2/10x",
|
| 365 |
"TCGA-SARC/uni_v2/20x",
|
| 366 |
"TCGA-SARC/uni_v2/5x",
|
| 367 |
+
"TCGA-SKCM/chief/10x",
|
| 368 |
"TCGA-SKCM/conch_v1/10x",
|
| 369 |
"TCGA-SKCM/conch_v1/20x",
|
| 370 |
"TCGA-SKCM/conch_v1/5x",
|
|
|
|
| 379 |
"TCGA-SKCM/uni_v2/10x",
|
| 380 |
"TCGA-SKCM/uni_v2/20x",
|
| 381 |
"TCGA-SKCM/uni_v2/5x",
|
| 382 |
+
"TCGA-STAD/chief/10x",
|
| 383 |
"TCGA-STAD/conch_v1/10x",
|
| 384 |
"TCGA-STAD/conch_v1/20x",
|
| 385 |
"TCGA-STAD/conch_v1/5x",
|
|
|
|
| 408 |
"TCGA-TGCT/uni_v2/10x",
|
| 409 |
"TCGA-TGCT/uni_v2/20x",
|
| 410 |
"TCGA-TGCT/uni_v2/5x",
|
| 411 |
+
"TCGA-THCA/chief/10x",
|
| 412 |
"TCGA-THCA/conch_v1/10x",
|
| 413 |
"TCGA-THCA/conch_v1/20x",
|
| 414 |
"TCGA-THCA/conch_v1/5x",
|
|
|
|
| 423 |
"TCGA-THCA/uni_v2/10x",
|
| 424 |
"TCGA-THCA/uni_v2/20x",
|
| 425 |
"TCGA-THCA/uni_v2/5x",
|
| 426 |
+
"TCGA-THYM/chief/10x",
|
| 427 |
"TCGA-THYM/conch_v1/10x",
|
| 428 |
"TCGA-THYM/conch_v1/20x",
|
| 429 |
"TCGA-THYM/conch_v1/5x",
|
|
|
|
| 438 |
"TCGA-THYM/uni_v2/10x",
|
| 439 |
"TCGA-THYM/uni_v2/20x",
|
| 440 |
"TCGA-THYM/uni_v2/5x",
|
| 441 |
+
"TCGA-UCEC/chief/10x",
|
| 442 |
"TCGA-UCEC/conch_v1/10x",
|
| 443 |
"TCGA-UCEC/conch_v1/20x",
|
| 444 |
"TCGA-UCEC/conch_v1/5x",
|
|
|
|
| 453 |
"TCGA-UCEC/uni_v2/10x",
|
| 454 |
"TCGA-UCEC/uni_v2/20x",
|
| 455 |
"TCGA-UCEC/uni_v2/5x",
|
| 456 |
+
"TCGA-UCS/chief/10x",
|
| 457 |
"TCGA-UCS/conch_v1/10x",
|
| 458 |
"TCGA-UCS/conch_v1/20x",
|
| 459 |
"TCGA-UCS/conch_v1/5x",
|
|
|
|
| 468 |
"TCGA-UCS/uni_v2/10x",
|
| 469 |
"TCGA-UCS/uni_v2/20x",
|
| 470 |
"TCGA-UCS/uni_v2/5x",
|
| 471 |
+
"TCGA-UVM/chief/10x",
|
| 472 |
"TCGA-UVM/conch_v1/10x",
|
| 473 |
"TCGA-UVM/conch_v1/20x",
|
| 474 |
"TCGA-UVM/conch_v1/5x",
|
|
|
|
| 484 |
"TCGA-UVM/uni_v2/20x",
|
| 485 |
"TCGA-UVM/uni_v2/5x"
|
| 486 |
],
|
| 487 |
+
"commit_message": "Upload TCGA partial batch: chief, conch_v1, ctranspath, gigapath_slide, titan, uni_v1, uni_v2",
|
| 488 |
"builder_run_id": null,
|
| 489 |
"source_hashes": {
|
| 490 |
"location": "metadata/h5_validation.parquet",
|
metadata/shard_manifest.parquet
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:c82ace46c696156e8ee7aa9e33a6b28a734d7865a322879cb1586bd8d689e680
|
| 3 |
+
size 76367
|
metadata/slide_registry.parquet
CHANGED
|
@@ -1,3 +1,3 @@
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
-
oid sha256:
|
| 3 |
-
size
|
|
|
|
| 1 |
version https://git-lfs.github.com/spec/v1
|
| 2 |
+
oid sha256:1617d3935c32a40e925ce7ad8b47bc674f6f11a85c0c50028f30d5d214f69d98
|
| 3 |
+
size 11910010
|