Datasets:
Tasks:
Other
Modalities:
Text
Formats:
csv
Size:
100K - 1M
Tags:
traditional-chinese-medicine
biomedical
drug-discovery
knowledge-graph
computational-pharmacology
License:
| license: other | |
| task_categories: | |
| - other | |
| language: | |
| - en | |
| - zh | |
| tags: | |
| - traditional-chinese-medicine | |
| - biomedical | |
| - drug-discovery | |
| - knowledge-graph | |
| - computational-pharmacology | |
| configs: | |
| - config_name: nodes | |
| default: true | |
| data_files: original_kg/nodes.tsv | |
| sep: "\t" | |
| - config_name: edges | |
| data_files: original_kg/edges.tsv | |
| sep: "\t" | |
| # TCM-MKG Reorganized Graph Export | |
| > 本仓库是对原始 TCM-MKG V1.0 的格式整理与图结构导出，不是原始数据集的官方发布，也不声称拥有底层知识内容。 | |
| ## Dataset Description | |
| This repository contains a Hugging Face-compatible, reorganized graph export derived from the publicly available **Traditional Chinese Medicine Multidimensional Knowledge Graph (TCM-MKG V1.0)**. | |
| JX-Lab performed format conversion and schema normalization to make the resource easier to load for knowledge graph and machine learning workflows. The repository retains only the reorganized `nodes.tsv` and `edges.tsv` outputs. Copies of the original Zenodo tables and documentation are not distributed in this public repository. | |
| The legacy directory name `original_kg/` is retained for API and link compatibility; its files are reorganized exports generated by JX-Lab, not the untouched original source tables. | |
| ## Files | |
| - `original_kg/nodes.tsv`: 369,912 normalized node records | |
| - `original_kg/edges.tsv`: 48,849,793 normalized relationship records | |
| The exported schema preserves provenance fields such as `source_table`, `evidence`, and `attributes_json` so records can be traced back to source-table identifiers. | |
| ## Original Source And Attribution | |
| The underlying knowledge content comes from: | |
| **Traditional Chinese Medicine Multidimensional Knowledge Graph (TCM-MKG V1.0)** | |
| - Original authors: Zeng, Jingqi; Jia, Xiaobin | |
| - Publisher: China Pharmaceutical University | |
| - Original source: https://doi.org/10.5281/zenodo.13763953 | |
| - Original release year: 2024 | |
| TCM-MKG integrates information from multiple biomedical, terminology, pharmacopoeia, and traditional Chinese medicine databases. Rights in that source content remain with the original authors and the respective upstream rights holders. | |
| ## What JX-Lab Changed | |
| JX-Lab's contribution is limited to technical organization and format conversion, including: | |
| - transforming source-specific tables into unified node and edge tables | |
| - normalizing entity identifiers and relationship fields | |
| - retaining source-table provenance and structured attributes | |
| - preparing Hugging Face dataset configurations for streaming and loading | |
| No claim is made that JX-Lab collected the original biomedical evidence or created the original TCM-MKG knowledge resource. | |
| ## License And Third-Party Rights | |
| This repository is marked `license: other` because the original Zenodo record does not specify a formal license in its Rights/License field. JX-Lab does not apply a new blanket CC BY, MIT, or other license to the underlying source data. | |
| Use of this reorganized export remains subject to: | |
| 1. the terms stated by the original TCM-MKG authors; | |
| 2. the licenses and terms of each incorporated upstream database or terminology; | |
| 3. applicable copyright, database-right, contract, attribution, and research-use requirements. | |
| Public availability does not by itself remove those obligations. Users must verify that their intended use, especially redistribution or commercial use, is permitted. | |
| ## Usage | |
| ```python | |
| from datasets import load_dataset | |
| nodes = load_dataset("JX-Lab/TCM-MKG", "nodes", split="train") | |
| edges = load_dataset("JX-Lab/TCM-MKG", "edges", split="train", streaming=True) | |
| ``` | |
| Streaming is recommended for the edge table. | |
| ## Citation | |
| Please cite the original dataset: | |
| ```bibtex | |
| @dataset{zeng_jingqi_2024_13763953, | |
| author = {Zeng, Jingqi and Jia, Xiaobin}, | |
| title = {Traditional Chinese Medicine Multidimensional Knowledge Graph (TCM-MKG)}, | |
| year = {2024}, | |
| publisher = {China Pharmaceutical University}, | |
| version = {V1.0}, | |
| doi = {10.5281/zenodo.13763953}, | |
| url = {https://doi.org/10.5281/zenodo.13763953} | |
| } | |
| ``` | |
| When describing this repository, please identify it as a reorganized Hugging Face export and indicate that JX-Lab performed the format conversion. | |
| ## Rights-Holder Notice And Takedown | |
| 本仓库尊重原作者及各上游数据权利人的权益。如权利人认为本整理版包含未经适当授权、不应公开或署名不准确的内容，请通过本仓库的 Hugging Face Community 页面联系 JX-Lab，并提供相关权利和文件范围说明。收到并核实后，将及时删除、限制访问或修正相关内容。 | |
| This notice is intended to provide a practical correction and takedown channel; it does not replace any permission required for hosting or use. | |
| ## Disclaimer | |
| This dataset is provided for research and technical evaluation. It does not constitute clinical diagnosis, treatment, prescription, or medication advice. JX-Lab makes no warranty regarding completeness, accuracy, title, or non-infringement. | |