rem stringlengths 1 53.3k | add stringlengths 0 80.5k | context stringlengths 6 326k | meta stringlengths 141 403 | input_ids list | attention_mask list | labels list |
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public ThisVar(Var var) { | public ThisVar(Var var,Position pos) { super(pos); | public ThisVar(Var var) { this.var = var; } | 236 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/236/90dc88cce8c5165bc6671cb39a0f86e4352fefc5/ThisVar.java/buggy/aop/abc/src/abc/weaving/aspectinfo/ThisVar.java | [
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byte[] toRead = new byte[4]; in.read(toRead); long order = batoi(toRead); little = toRead[2] != 0xff || toRead[3] != 0xff; | long order = in.readInt(); little = order == 0x0000ffff; | protected void initFile(String id) throws FormatException, IOException { super.initFile(id); in = new RandomAccessStream(id); // initialize an array containing tag offsets, so we can // use an O(1) search instead of O(n) later. // Also determine whether we will be reading color or grayscale // image... | 55303 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55303/2df09d33bfdc966378aae0cc09cb503afb983bc2/OpenlabReader.java/buggy/loci/formats/in/OpenlabReader.java | [
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VM_Thread.getCurrentThread().jniEnv.JNITopJavaFP = VM_Magic.getFramePointer(); | VM_Thread.getCurrentThread().jniEnv.setTopJavaFP(VM_Magic.getFramePointer()); | public void run () throws VM_PragmaNoOptCompile /* refs stored in registers by opt compiler will not be relocated by GC */{ if (trace) VM_Scheduler.trace(" Entering run method of NDT ", " "); VM_Processor myProcessor = VM_ProcessorLocalState.getCurrentProcessor(); int i, transferCount=0, stuckCount=0; //... | 5245 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5245/c25a9ead6c2350936496e2f54b27ffdd3b956aed/VM_NativeDaemonThread.java/buggy/rvm/src/vm/scheduler/VM_NativeDaemonThread.java | [
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if (lastChild == catchTarget) { | if (catchTarget != null && lastChild == catchTarget) { | private int generateICode(Node node, int iCodeTop) { int type = node.getType(); Node child = node.getFirstChild(); Node firstChild = child; switch (type) { case TokenStream.FUNCTION : { iCodeTop = addByt... | 54155 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54155/024a61b8eb683ab3fab2ce527b7ff260f952b329/Interpreter.java/buggy/js/rhino/src/org/mozilla/javascript/Interpreter.java | [
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codePanel.add(getSaveAsjmeButton(), gridBagConstraints_2); | private void jbInit() throws Exception { setTitle("Particle System Editor"); setDefaultCloseOperation(JFrame.DO_NOTHING_ON_CLOSE); initColorChooser(); addWindowListener(new WindowAdapter() { public void windowClosing(WindowEvent e) { dispose(); } ... | 19503 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19503/d656126e2e043076896ac9355fbafe66b14e79b1/RenParticleEditor.java/clean/src/jmetest/effects/RenParticleEditor.java | [
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assertContains( "Invalid wtpmodules", classpath, "/direct-compile" ); assertDoesNotContain( "Invalid wtpmodules", classpath, "/direct-test" ); assertContains( "Invalid wtpmodules", classpath, "/direct-system" ); assertContains( "Invalid wtpmodules", classpath, "/direct-optional" ); | assertContains( "Invalid wtpmodules", wtpmodules, "/direct-compile" ); assertDoesNotContain( "Invalid wtpmodules", wtpmodules, "/direct-test" ); assertContains( "Invalid wtpmodules", wtpmodules, "/direct-sysdep" ); assertContains( "Invalid wtpmodules", wtpmodules, "/direct-optional" ); assertDoesNotContain( "Invalid w... | private void checkModule2Wtpmodules( File file ) throws Exception { InputStream fis = new FileInputStream( file ); String classpath = IOUtil.toString( fis ); IOUtil.close( fis ); // direct dependencies: include all assertContains( "Invalid wtpmodules", classpath, "/direc... | 1315 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1315/aa07bff6b7802c74461667534ba5ec607d8a3aaa/EclipsePluginMasterProjectTest.java/buggy/maven-plugins/maven-eclipse-plugin/src/test/java/org/apache/maven/plugin/eclipse/EclipsePluginMasterProjectTest.java | [
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if(i == index) { | if (i == index) { | public java.lang.Object getElementAt(int index) { // Loop through the desired number of elements (it might be quicker to // convert to an array). Object element = null; Iterator iter = _set.iterator(); for(int i = 0; iter.hasNext(); i++) { element = iter.next(); ... | 7166 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7166/ca3bcb5d6dd283c4553bcbfe50b108dc5d499768/UMLComboBoxModel.java/buggy/src_new/org/argouml/uml/ui/UMLComboBoxModel.java | [
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public ActionForward prepareEditEvaluationMethod(ActionMapping mapping, ActionForm form, HttpServletRequest request, HttpServletResponse response) throws FenixActionException, FenixFilterException { ISiteComponent evaluationComponent = new InfoEvaluationMethod(); try { ... | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/f1790994e90150a41f878ae3110bab38ce01b720/TeacherAdministrationViewerDispatchAction.java/clean/src/net/sourceforge/fenixedu/presentationTier/Action/teacher/TeacherAdministrationViewerDispatchAction.java | [
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if ( !p.parse( localRepository.getArtifactFile( parentGroupId, parentArtifactId, parentVersion, "pom" ) ) ) | try | public void endElement( String uri, String localName, String rawName ) throws SAXException { // support both v3 <extend> and v4 <parent> if ( rawName.equals( "parent" ) ) { if ( parentArtifactId == null || parentArtifactId.trim().length() == 0 ) { ... | 50542 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50542/bab8d3fd909f5ba07ec58c6ecc29a1011c94f910/ModelReader.java/clean/maven-mboot2/src/main/java/model/ModelReader.java | [
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if (!dir.exists() && (!create || !dir.mkdir())) return null; | if (!dir.exists() && (!create || !dir.mkdir())) { return null; } | private static URL getPersistenceUrl(URL baseUrl, boolean create) { if (baseUrl == null) return null; try { // make sure the directory exists URL url = new URL(baseUrl, PERS_FOLDER); File dir = new File(url.getFile()); if (!dir.exists() && (!creat... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/e38d295ea613cf9f08aadb93a84a33d2e91abc5f/ChooseWorkspaceData.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/internal/ide/ChooseWorkspaceData.java | [
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return formModel.isDirty(); | return getFormModel().isDirty(); | public boolean isDirty() { return formModel.isDirty(); } | 55916 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55916/c9013e73099323f1f2ab80f861e1ee43df97df50/AbstractForm.java/buggy/src/org/springframework/richclient/form/AbstractForm.java | [
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search.y = caretBounds.y; | search.baseline = caretBounds.y + caretBounds.height / 2; | private void doSelect(int type, boolean isForward, boolean appendSelection) { TextLocation caretLocation = getTextualViewer().getCaretLocation(); SelectionRange range = getTextualViewer().getSelectionRange(); TextLocation otherEnd; if (range.isForward) otherEnd = range.begin; else otherEnd = range.end; Rectangle care... | 11225 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11225/e4acefac06a41b3df32eb54fe2dde830d5a6752b/TextTool.java/buggy/org.eclipse.gef.examples.text/src/org/eclipse/gef/examples/text/tools/TextTool.java | [
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evaluator.getSchemaReader().getMemberRange(level, m, member, members); | if (m != null) evaluator.getSchemaReader().getMemberRange(level, m, member, members); | static List periodsToDate( Evaluator evaluator, Level level, Member member) { if (member == null) { member = evaluator.getContext( level.getHierarchy().getDimension()); } Member m = member; while (m != null) { if (m.getLevel() == level) { break; } m = m.getParentMember(); } ArrayList members = n... | 51263 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51263/ab7187961d225e2c1d2619ebfd45804596c14180/FunUtil.java/buggy/src/main/mondrian/olap/fun/FunUtil.java | [
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return false; | return true; | private static boolean needNotLog( Throwable e ) { for ( Iterator itor = ExpectedExceptionList.iterator( ); itor.hasNext( ); ) { if ( ( (Class) itor.next( ) ).isInstance( e ) ) { return false; } } return true; } | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/93501cc833eb0803a2a21aa856934fefaf5607ae/ExceptionHandler.java/clean/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/internal/ui/util/ExceptionHandler.java | [
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throw new BuildException("You must specify at least one nested" + " fileset."); | throw new BuildException(ERROR_NO_FILESET); | public void execute() { if (filesets.size() == 0) { throw new BuildException("You must specify at least one nested" + " fileset."); } Iterator iter = filesets.iterator(); while (iter.hasNext()) { doFileSet((FileSet) iter.next()); ... | 11833 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11833/0d4d1d568091bd0555889d1f61bb10a6a2989c36/AntUnit.java/clean/src/main/org/apache/ant/antunit/AntUnit.java | [
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Grf.GRF__LINE ) ); | Grf.GRF__LINE ) ); | protected DefaultGrfState setGrfAttributes( DefaultGrf grf ) { DefaultGrfState oldState = new DefaultGrfState(); oldState.setColour( grf.attribute( Grf.GRF__COLOUR, BAD, Grf.GRF__LINE ) ); oldState.setStyle( grf.attribute( Grf.GRF__STYLE, BAD, Grf.GRF__LINE ) ); ... | 48494 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48494/8cf948ff24357ab41cf888656383cd0498da9eaf/SpecData.java/clean/splat/src/main/uk/ac/starlink/splat/data/SpecData.java | [
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assertTrue(!expr.match(name)); | assertTrue(expr.match(name)); | public void testExpressions() { String name = "Kevin Gilpin"; WildcardMatchExpression expr; expr = new WildcardMatchExpression("*"); assertTrue(expr.match(name)); expr = new WildcardMatchExpression("K*"); assertTrue(expr.match(name)); expr = new WildcardMatchExpression("*n"); assertTrue(expr.match(name)); e... | 4522 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4522/5a0bea2e77afa70ab4ea660e9a2fab24c192ea1f/TestWildcardMatchExpression.java/clean/prophit/test/java/orbit/gui/TestWildcardMatchExpression.java | [
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DataObject image = ssn.create("examples.Image"); | DataObject image = ssn.create("linkTest.Image"); | public void testImage() { Session ssn = SessionManager.getSession(); DataObject image = ssn.create("examples.Image"); image.set("id", BigInteger.ZERO); byte[] bytes = "This is the image.".getBytes(); image.set("bytes", bytes); image.save(); OID oid = new OID("example... | 12196 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12196/703319bfd292f40acbfef1124c76ffd5f8e143a3/LinkTest.java/buggy/archive/proto/test/src/com/arsdigita/persistence/LinkTest.java | [
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statusMessage.setText("Storing " + nameres); | statusMessage.setText(Messages.getString("DocumentView.39") + nameres); | public void run() { //Get the name to save the resource as String nameres = JOptionPane.showInputDialog(null, "Name of the XML resource (extension incluse)"); if (nameres != null) { try { //Change status message and display a progress dialog statusMessage.setText("Storing " + nameres)... | 2909 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2909/dede9cd407089be1164a825045731d2cc10fbe17/DocumentView.java/buggy/src/org/exist/client/DocumentView.java | [
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list.add(begin(next)); | list.add(eval(context, next, self)); | private IRubyObject[] setupArgs(IRuby runtime, ThreadContext context, Node node) { if (node == null) { return IRubyObject.NULL_ARRAY; } if (node instanceof ArrayNode) { ISourcePosition position = context.getPosition(); ArrayList list = new ArrayList(((ArrayNode)... | 48072 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48072/6e15491217631472c05c6928672f9c7064a978b3/EvaluationState.java/buggy/src/org/jruby/evaluator/EvaluationState.java | [
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String fieldName = cmpFieldType.getFieldName().getStringValue(); | String fieldName = getString(cmpFieldType.getFieldName()); | public void buildCMPSchema(EARContext earContext, String ejbModuleName, EjbJarType ejbJar, OpenejbOpenejbJarType openejbEjbJar, ClassLoader cl, EJBSchema ejbSchema, SQL92Schema sqlSchema) throws DeploymentException { EntityBeanType[] entityBeans = ejbJar.getEnterpriseBeans().getEntityArray(); for (int... | 47052 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47052/fe1c85c68f999e407ef066cd7ee463fb7752ac57/CMPEntityBuilder.java/clean/openejb2/modules/core/src/java/org/openejb/deployment/CMPEntityBuilder.java | [
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void setShowIfBlank(String showIfBlank); | void setShowIfBlank( String showIfBlank ); | void setShowIfBlank(String showIfBlank); | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/418b538dedc46927b62e9d884dd3fc2419ed5e34/IScriptStyle.java/buggy/engine/org.eclipse.birt.report.engine/src/org/eclipse/birt/report/engine/api/script/instance/IScriptStyle.java | [
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gridBagConstraints.insets = new java.awt.Insets(0, 0, 0, 3); | private void initComponents() {//GEN-BEGIN:initComponents java.awt.GridBagConstraints gridBagConstraints; consoleSplitter = new javax.swing.JSplitPane(); viewPanel = new javax.swing.JPanel(); emptyPanel = new javax.swing.JPanel(); reportPanel = new javax.swing.JPanel(); edi... | 7352 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7352/9e786b0d1a7e5b23874458bb460631bf7df21105/FindBugsFrame.java/buggy/findbugs/src/java/edu/umd/cs/findbugs/gui/FindBugsFrame.java | [
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org.exist.xquery.parser.XQueryAST tmp148_AST = null; tmp148_AST = (org.exist.xquery.parser.XQueryAST)astFactory.create(LT(1)); astFactory.addASTChild(currentAST, tmp148_AST); | org.exist.xquery.parser.XQueryAST tmp152_AST = null; tmp152_AST = (org.exist.xquery.parser.XQueryAST)astFactory.create(LT(1)); astFactory.addASTChild(currentAST, tmp152_AST); | public final void typeswitchExpr() throws RecognitionException, TokenStreamException, XPathException { returnAST = null; ASTPair currentAST = new ASTPair(); org.exist.xquery.parser.XQueryAST typeswitchExpr_AST = null; String varName; org.exist.xquery.parser.XQueryAST tmp145_AST = null; tmp145_AST = (org.exis... | 2909 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2909/9aec85412cf9f86cb609358133dd23628306f44a/XQueryParser.java/clean/src/org/exist/xquery/parser/XQueryParser.java | [
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public void widgetDefaultSelected(SelectionEvent e) {} | public void widgetDefaultSelected(SelectionEvent e) { } | protected Control createContents(Composite parent) { if(isNew){ Group custom = new Group(parent, SWT.NONE); GridLayout gl = new GridLayout(2, false); custom.setLayout(gl); customButton = new Button(custom, SWT.CHECK); customButton.setText("Custom Query"); GridData gd = new GridData(GridData.FILL_HORIZO... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/a668a4d0cd9272f81a8faa996af0344a2be65552/BugzillaQueryDialog.java/clean/org.eclipse.mylyn.bugzilla.ui/src/org/eclipse/mylyn/bugzilla/ui/tasklist/BugzillaQueryDialog.java | [
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private synchronized boolean sendRaw(Message message, int num) { | private boolean sendRaw(Message message, int num) { | private synchronized boolean sendRaw(Message message, int num) { try { boolean result = false; Message.Header header = message.getHeader(); String msgType = header.getString(MsgType.FIELD); initializeHeader(header); if (num > 0) { header.s... | 6791 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6791/ff1a8ce81a4f659e070dfc7aea620ff45f3dec8c/Session.java/clean/core/src/main/java/quickfix/Session.java | [
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private void createBookmarkBar( ) | private void createBookmarkBar( boolean isRequired ) | private void createBookmarkBar( ) { new Label( displayArea, SWT.NONE ).setText( LABEL_BOOKMARK ); bookmarkEditor = new Text( displayArea, SWT.BORDER | SWT.SINGLE ); bookmarkEditor.setLayoutData( new GridData( GridData.FILL_HORIZONTAL ) ); bookmarkEditor.addModifyListener( new ModifyListener( ) { public void modi... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/456c2580ebbb17874b3c7a9a1530105e88e0b4d5/HyperlinkBuilder.java/clean/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/ui/dialogs/HyperlinkBuilder.java | [
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{ panel2.setLayout(new FormLayout( new ColumnSpec[] { new ColumnSpec(Sizes.dluX(10)), FormFactory.LABEL_COMPONENT_GAP_COLSPEC, FormFactory.DEFAULT_COLSPEC, FormFactory.LABEL_COMPONENT_GAP_COLSPEC, FormFactory.DEFAULT_COLSPEC, new ColumnSpec(ColumnSpec.FILL, Sizes.DEFAULT, FormSpec.DEFAULT_GROW), FormFactory.DEFAULT_CO... | label5.setText("Look and feel:"); panel1.add(label5, cc.xy(3, 9)); panel1.add(lafCombo, cc.xywh(5, 9, 5, 1)); } tabbedPane1.addTab("General", panel1); | private void initComponents() { // JFormDesigner - Component initialization - DO NOT MODIFY //GEN-BEGIN:initComponents dialogPane = new JPanel(); contentPane = new JPanel(); tabbedPane1 = new JTabbedPane(); panel1 = new JPanel(); label2 = new JLabel(); startupAction... | 4430 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4430/fe7a9c9f3de6f8ae9a60f9e9c118c31baf44de7f/DialogPrefs.java/buggy/src/org/antlr/works/dialog/DialogPrefs.java | [
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if (DBusConnection.EXCEPTION_DEBUG) e.printStackTrace(); | if (DBusConnection.EXCEPTION_DEBUG && Debug.debug) Debug.print(Debug.ERR, e); | public static Object executeRemoteMethod(RemoteObject ro, Method m, DBusConnection conn, boolean async, Object... args) throws DBusExecutionException { Type[] ts = m.getGenericParameterTypes(); String sig = null; if (ts.length > 0) try { sig = Marshalling.getDBusType(ts); args = Mars... | 5401 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5401/648ce9694ab64115317375f5a779eead513a98ac/RemoteInvocationHandler.java/buggy/org/freedesktop/dbus/RemoteInvocationHandler.java | [
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private IEntityGroup getGroup() { IEntityGroup theGroup = null; EntityIdentifier[] groups = null; | private IEntityGroup getGroup(String key) { | private IEntityGroup getGroup() { IEntityGroup theGroup = null; EntityIdentifier[] groups = null; try { groups = GroupService.searchForGroups(groupName, IGroupConstants.IS, org.jasig.portal.security.IPerson.class); } catch (GroupsException e1) {... | 24959 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/24959/db95226861b2abe888f9ade2726c9e910a7e661b/GroupMembershipEvaluator.java/buggy/source/org/jasig/portal/layout/dlm/providers/GroupMembershipEvaluator.java | [
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if (dialog.getReturnCode() == dialog.OK) { | if (dialog.getReturnCode() == Dialog.OK) { | public void run() { IResourceNavigator navigator = getNavigator(); ResourcePatternFilter filter = navigator.getPatternFilter(); FiltersContentProvider contentProvider = new FiltersContentProvider(filter); IWorkingSet workingSet = navigator.getWorkingSet(); FilterDialog dialog = new FilterDialog( getShell(), getVie... | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/02ba77e383bb608847bcbeec7cbb2c08f1e26a2a/FilterSelectionAction.java/buggy/bundles/org.eclipse.ui.views/src/org/eclipse/ui/views/navigator/FilterSelectionAction.java | [
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socket, socket.getOutputStream(), this, isPaused()); | destination, destination.getOutputStream(), this, isPaused()); | private SpyClientConnection(Socket in) throws IOException { super(SpyProxy.this,in); server = new Socket(serverAddress, serverPort); if (isDebug() || showConnections) { println("Client " + in.getInetAddress()... | 49595 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49595/3d16e8477db10f623bbdcbee23dd8752ff3ff1eb/SpyProxy.java/buggy/yajul-core/src/org/yajul/net/SpyProxy.java | [
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String s = getString(columnIndex); | String s = getFixedString(columnIndex); | public BigDecimal getBigDecimal(int columnIndex, int scale) throws SQLException { String s = getString(columnIndex); BigDecimal val; if (s != null) { try { val = new BigDecimal(s); } catch (NumberFormatException e) { throw new PSQLException ("postgresql.res.badbigdec",s); } try ... | 49504 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49504/9cdf723142768f577b926c6539693e1639d74efe/ResultSet.java/buggy/src/interfaces/jdbc/org/postgresql/jdbc1/ResultSet.java | [
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jjstateSet[jjnewStateCnt++] = 35; break; case 37: | jjstateSet[jjnewStateCnt++] = 38; break; case 40: | private final int jjMoveNfa_4(int startState, int curPos){ int[] nextStates; int startsAt = 0; jjnewStateCnt = 74; int i = 1; jjstateSet[0] = startState; int j, kind = 0x7fffffff; for (;;) { if (++jjround == 0x7fffffff) ReInitRounds(); if (curChar < 64) { long l = 1L << cu... | 9291 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9291/5b85dc5e122a5bdf3ea90d4f89cebe71413fc26b/ParserTokenManager.java/buggy/src/java/org/apache/velocity/runtime/parser/ParserTokenManager.java | [
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if (IWOLipsModel.EXT_COMPONENT | if (IWOLipsModel .EXT_COMPONENT | private final boolean examineResource( IResource resource, int kindOfChange) throws CoreException { //see bugreport #708385 if (!resource.isAccessible() && kindOfChange != IResourceDelta.REMOVED) return false; // reset project file to update projectFile = null; switch (resource.getType()) { ... | 2575 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2575/a5179e8f4a9458bdfbf3e272b7e3f4e5bb9a3a2a/ResourceChangeListener.java/buggy/projects/wolips/plugins/org.objectstyle.wolips/java/org/objectstyle/wolips/core/listener/ResourceChangeListener.java | [
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MavenProject reactorProject = getModuleFromReactor( module ); | Set set = getModulesFromReactor( getExecutedProject() ); | private void processModules( Archiver archiver, List modulesList, boolean includeBaseDirectory ) throws IOException, ArchiverException, XmlPullParserException { if ( reactorProjects != null ) { List moduleFileSets = new ArrayList(); for ( Iterator modules = modulesList.... | 51807 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51807/49d0fb39446408686654104fcf34901fb830796a/AbstractAssemblyMojo.java/buggy/maven-assembly-plugin/src/main/java/org/apache/maven/plugin/assembly/AbstractAssemblyMojo.java | [
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asm.emitLInt(T0, VM_ObjectModel.getArrayLengthOffset(), T0); | asm.emitLInt(T0, VM_ObjectModel.getArrayLengthOffset().toInt(), T0); | private boolean generateInlineCode(VM_MethodReference methodToBeCalled) { VM_Atom methodName = methodToBeCalled.getName(); if (methodToBeCalled.getType() == VM_TypeReference.SysCall) { VM_TypeReference[] args = methodToBeCalled.getParameterTypes(); // (1) Set up arguments according to OS calling ... | 4011 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4011/71f0481e0131f8f2137e2feea85ae32a28daffcc/VM_QuickCompiler.java/clean/rvm/src/vm/arch/powerPC/compilers/quick/VM_QuickCompiler.java | [
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target.setBuildTarget(getTarget()); | target.setBuildAttribute(IMakeTarget.BUILD_TARGET, getTarget()); | protected void okPressed() { IMakeTarget target = fTarget; try { if (fTarget == null) { target = fTargetManager.createTarget(fContainer.getProject(), getTargetName(), targetBuildID); } target.setStopOnError(isStopOnError()); target.setRunAllBuilders(runAllBuilders()); target.setUseDefaultBuildCmd(useDef... | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/bcf69885a2954f37381ed63c03100b1f89da3310/MakeTargetDialog.java/clean/build/org.eclipse.cdt.make.ui/src/org/eclipse/cdt/make/ui/dialogs/MakeTargetDialog.java | [
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try { setStyleClass((String) evalAttr("styleClass", getStyleClassExpr(), String.class)); } catch (NullAttributeException ex) { } | if ((string = EvalHelper.evalString("style", getStyleExpr(), this, pageContext)) != null) setStyle(string); if ((string = EvalHelper.evalString("styleClass", getStyleClassExpr(), this, pageContext)) != null) setStyleClass(string); | private void evaluateExpressions() throws JspException { try { setCollection((String) evalAttr("collection", getCollectionExpr(), String.class)); } catch (NullAttributeException ex) { } try { setFilter(((Boolean) evalAttr(... | 2722 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2722/022bd23c954cf673e53731849d562b3c295473f1/ELOptionsTag.java/clean/contrib/struts-el/src/share/org/apache/strutsel/taglib/html/ELOptionsTag.java | [
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UIDefaults defaults = UIManager.getLookAndFeelDefaults(); scrollbar.setForeground(defaults.getColor("ScrollBar.foreground")); scrollbar.setBackground(defaults.getColor("ScrollBar.background")); scrollbar.setBorder(defaults.getBorder("ScrollBar.border")); | LookAndFeel.installColors(scrollbar, "ScrollBar.background", "ScrollBar.foreground"); LookAndFeel.installBorder(scrollbar, "ScrollBar.border"); | protected void installDefaults() { UIDefaults defaults = UIManager.getLookAndFeelDefaults(); scrollbar.setForeground(defaults.getColor("ScrollBar.foreground")); scrollbar.setBackground(defaults.getColor("ScrollBar.background")); scrollbar.setBorder(defaults.getBorder("ScrollBar.border")); scrollbar.se... | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/ae9ec43c5570a0f69e3d8c8b733283719f52a770/BasicScrollBarUI.java/buggy/core/src/classpath/javax/javax/swing/plaf/basic/BasicScrollBarUI.java | [
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out .print(" " + Util .showServiceClasses(s[j])); | out.print(" "+ Util.showServiceClasses(s[j])); | public Object run() { for (int i = 0; i < b.length; i++) { if (b[i] != null) { out.println("Bundle: " + showBundle(b[i])); if (opts.get("-r") != null || opts.get("-u") == null) { ServiceReference[] s =... | 13251 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13251/ec4377b941806e51e9a4d0b4d45b2a48fc5f69e9/FrameworkCommandGroup.java/buggy/osgi/bundles/frameworkcommands/src/org/knopflerfish/bundle/frameworkcommands/FrameworkCommandGroup.java | [
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protected void openConnection(String host, int port, Properties info, String database, String url, Driver d) throws SQLException { // Throw an exception if the user or password properties are missing // This occasionally occurs when the client uses the properties version // of getConnection(), and is a ... | 49868 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49868/d832cd2773997d717fa8a1773bc600ff10ce33eb/Connection.java/clean/org/postgresql/Connection.java | [
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else if (position == _doc.getPromptPos()) { moveToEnd(); } else { _pane.setCaretPosition(position - 1); } } | }; worker.start(); | public void actionPerformed(ActionEvent e) { if (!_busy()) { int position = _pane.getCaretPosition(); if (position < _doc.getPromptPos()) { moveToPrompt(); } else if (position == _doc.getPromptPos()) { // Wrap around to the end moveToEnd(); } ... | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/cfd8bfb1865d4fad4b92a33a577ef90b6209a355/InteractionsController.java/clean/drjava/src/edu/rice/cs/drjava/ui/InteractionsController.java | [
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public GVTGlyphMetrics getGlyphMetrics(int glyphIndex); | GVTGlyphMetrics getGlyphMetrics(int glyphIndex); | public GVTGlyphMetrics getGlyphMetrics(int glyphIndex); | 46680 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46680/4c1a37c6e3e260eb88efd61d61285ad704f7c64a/GVTGlyphVector.java/buggy/sources/org/apache/batik/gvt/font/GVTGlyphVector.java | [
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} | } | public void createNodes(DefaultMutableTreeNode top, Object[][] data, int start, int len, int level) { //DefaultMutableTreeNode node = top; int size = ((Feature)data[start][0]).size(); String whole = ((Feature)data[start][0]).toString(); double max = ((Double)data[start][1]).doubleValue(); i... | 51753 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51753/ae13593fb88a52b5a14b959b7b4aaa2228c8cc16/Hyperplane.java/buggy/src/edu/cmu/minorthird/classify/algorithms/linear/Hyperplane.java | [
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vFeatList = new ArrayList(); | vFeatList = new ArrayList<Ability>(); | public List getVirtualFeatList() { List vFeatList = getStableVirtualFeatList(); //Did we get a valid list? If so, return it. if (vFeatList != null) { return vFeatList; } setVirtualFeatsStable(true); vFeatList = new ArrayList(); if (stableVirtualFeatList != null) { for (Iterator i = stableVirtualFeatList.i... | 48301 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48301/eb5f93299afbba8e2b27cdc67dfddc016c5d86a9/PlayerCharacter.java/buggy/code/src/java/pcgen/core/PlayerCharacter.java | [
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descent = paintControlIcons(g, indent, descent, i, depth + 1, tree, mod, mod.getChild(node, i)); | descent = paintControlIcons(g, indent, descent, i, depth + 1, tree, mod, mod.getChild(node, i)); | int paintControlIcons(Graphics g, int indentation, int descent, int childNumber, int depth, JTree tree, TreeModel mod, Object node) { int h = descent; int rowHeight = getRowHeight(); Icon ei = UIManager.getLookAndFeelDefaults() .getIcon("Tree.expandedIcon"); Icon ci = UIManager.... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/f7b0a77266671350e38451a50ce054282a5860ef/BasicTreeUI.java/clean/core/src/classpath/javax/javax/swing/plaf/basic/BasicTreeUI.java | [
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AST tmp1901_AST_in = (AST)_t; | AST tmp1900_AST_in = (AST)_t; | public final void method_param_list(AST _t) throws RecognitionException { AST method_param_list_AST_in = (_t == ASTNULL) ? null : (AST)_t; AST __t342 = _t; AST tmp1900_AST_in = (AST)_t; match(_t,Method_param_list); _t = _t.getFirstChild(); AST tmp1901_AST_in = (AST)_t; match(_t,LEFTPAREN); _t = _t.getNextS... | 13952 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13952/041a16c78289f1c3ae5e575d3edc5e893a658e50/JPTreeParser.java/buggy/trunk/org.prorefactor.core/src/org/prorefactor/treeparserbase/JPTreeParser.java | [
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IASTSimpleDeclaration decl1 = (IASTSimpleDeclaration) tu .getDeclarations()[0]; ITypedef dword = (ITypedef) decl1.getDeclarators()[0].getName() .resolveBinding(); IType dword_t = dword.getType(); assertTrue(dword_t instanceof IBasicType); assertEquals(((IBasicType) dword_t).getType(), IBasicType.t_void); | IASTSimpleDeclaration decl1 = (IASTSimpleDeclaration) tu .getDeclarations()[0]; ITypedef dword = (ITypedef) decl1.getDeclarators()[0].getName() .resolveBinding(); IType dword_t = dword.getType(); assertTrue(dword_t instanceof IBasicType); assertEquals(((IBasicType) dword_t).getType(), IBasicType.t_void); | public void testTypedefExample4a() throws Exception { StringBuffer buffer = new StringBuffer("typedef void DWORD;\n"); //$NON-NLS-1$ buffer.append("typedef DWORD v;\n"); //$NON-NLS-1$ buffer.append("v signal(int);\n"); //$NON-NLS-1$ IASTTranslationUnit tu = parse(buffer.toString(), ParserLanguage... | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/98145350e052e39e57313251e0f805a20472a08d/AST2Tests.java/clean/core/org.eclipse.cdt.core.tests/parser/org/eclipse/cdt/core/parser/tests/ast2/AST2Tests.java | [
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public void tableCreated(RoomEvent event) { if (event != null) { // TolucaConstants.dumpBeanToXML(event); TableServer tableServer = event.getTableServer(); if (tableServer != null) { TrucoPlayer playerOwner = tableServer.getHost();//este player ... | 1311 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1311/41d462eab04bb797582f1b0121ef6312af5ad55b/EventDispatcherClient.java/clean/py/edu/uca/fcyt/toluca/net/EventDispatcherClient.java | [
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String flowstate, String viewID) { | String flowstate, String viewID, TargettedMessage message) { | public Object handleError(String returncode, Exception exception, String flowstate, String viewID) { if ((this.returncode == null || this.returncode.equals(returncode)) && (this.exceptionclass == null || exceptionclass.isInstance(exception)) && (this.flowstate == null || this.flowstate.equals(fl... | 45809 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45809/01de9da258f9211c8ed93d21b116f3254966c711/StaticActionErrorStrategy.java/clean/src/uk/org/ponder/rsf/flow/errors/StaticActionErrorStrategy.java | [
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public static void assertIsZeroed(Address start, int size) throws NoInlinePragma { Assert._assert(isSetHelper(start, size, true, Word.zero())); | public static void assertIsZeroed(Address start, int bytes) throws NoInlinePragma { Assert._assert(isSet(start, bytes, true, 0)); | public static void assertIsZeroed(Address start, int size) throws NoInlinePragma { Assert._assert(isSetHelper(start, size, true, Word.zero())); } | 49871 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49871/020fbdbb8e352c3d50eea4fafe06685b473aa414/Memory.java/buggy/MMTk/src/org/mmtk/utility/Memory.java | [
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if(arguments[1] instanceof Integer) { max = ((Integer)arguments[1]).intValue(); } if(arguments.length > 2) { if(arguments[2] instanceof Integer) { max = ((Integer)arguments[2]).intValue(); } | result = retrieveInt(ARGUMENT_MAX, arguments[1]); if(arguments.length > 2 && result == -1) { result = retrieveInt(ARGUMENT_MAX, arguments[2]); | protected Object doInvokeInternal(final Class clazz, String methodName, final Object[] arguments) { if(arguments.length == 0) return getHibernateTemplate().loadAll(clazz); final Object arg = arguments[0] instanceof GString ? arguments[0].toString() :arguments[0]; // if the arg is an instance of the class fi... | 51826 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51826/eb420a51890989f6ca7f281725a19ebec728f77c/FindAllPersistentMethod.java/clean/src/persistence/org/codehaus/groovy/grails/orm/hibernate/metaclass/FindAllPersistentMethod.java | [
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assert(drv.acceptsURL("jdbc:postgresql:test")); assert(drv.acceptsURL("jdbc:postgresql: assert(drv.acceptsURL("jdbc:postgresql: assert(drv.acceptsURL("jdbc:postgresql: assert(drv.acceptsURL("jdbc:postgresql: | assertTrue(drv.acceptsURL("jdbc:postgresql:test")); assertTrue(drv.acceptsURL("jdbc:postgresql: assertTrue(drv.acceptsURL("jdbc:postgresql: assertTrue(drv.acceptsURL("jdbc:postgresql: assertTrue(drv.acceptsURL("jdbc:postgresql: | public void testAcceptsURL() { try { // Load the driver (note clients should never do it this way!) org.postgresql.Driver drv = new org.postgresql.Driver(); assert(drv!=null); // These are always correct assert(drv.acceptsURL("jdbc:postgresql:test")); assert(drv.acceptsURL("jdbc:postg... | 11803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11803/b75814aee320ef2b67ad01ba72c266dbbf94db45/DriverTest.java/clean/src/interfaces/jdbc/org/postgresql/test/jdbc2/DriverTest.java | [
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return new ToHitData( base, reason.toString(), ToHitData.HIT_KICK, ToHitData.SIDE_FRONT ); | return new ToHitData(base, reason.toString(), ToHitData.HIT_KICK, ToHitData.SIDE_FRONT); | public static ToHitData getLegAttackBaseToHit( Entity attacker, Entity defender ) { int men = 0; int base = ToHitData.IMPOSSIBLE; StringBuffer reason = new StringBuffer(); final int nightModifier = (attacker.game.getOptions().booleanOptio... | 3464 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3464/9f7045be1eb4cb1b7c1b0e6be8f7c2d9c877cd43/Compute.java/buggy/megamek/src/megamek/common/Compute.java | [
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data.mode == GlobData.GLOB_REPLACE); | ((data.mode == GlobData.GLOB_REPLACE) ? NativeRegExp.TEST : NativeRegExp.MATCH)); | private static Object matchOrReplace(Context cx, Scriptable thisObj, Object[] args, Function funObj, GlobData data, boolean forceFlat) throws JavaScriptException { NativeRegExp re; String str = ScriptRuntime.toSt... | 51275 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51275/4aee7d25d756bce350cfec71216aff6e8c8bbc4b/RegExpImpl.java/clean/js/rhino/org/mozilla/javascript/regexp/RegExpImpl.java | [
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try { StringBuffer sb = new StringBuffer(); InputStreamReader reader = new InputStreamReader(stream); char buffer[] = new char[BUFFER_SIZE]; int n = 0; while (true) { n = reader.read(buffer); if (n < 1) break; sb.append(buffer, 0, n); | try { StringBuffer sb = new StringBuffer(); InputStreamReader reader = new InputStreamReader(stream); char buffer[] = new char[BUFFER_SIZE]; int n = 0; while (true) { n = reader.read(buffer); if (n < 1) { break; } sb.append(buffer, 0, n); } reader.close(); pageContext.setAttribute(id, sb.toString()); } catch (IOExcep... | public int doStartTag() throws JspException { // Acquire an input stream to the specified resource InputStream stream = pageContext.getServletContext().getResourceAsStream(name); if (stream == null) { JspException e = new JspException (messages.getMessage("resource.get", name))... | 54704 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54704/0d4b1857b2fb59a5c21be5e6ac9828740b5dcea6/ResourceTag.java/buggy/src/share/org/apache/struts/taglib/bean/ResourceTag.java | [
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EvaluationContextImpl evaluationContext = new EvaluationContextImpl(action.getSuspendContext(), frameProxy, Breakpoint.this.getThisObject(context, event)); | final EvaluationContextImpl evaluationContext = new EvaluationContextImpl( action.getSuspendContext(), frameProxy, getThisObject(context, event) ); | public boolean processLocatableEvent(final SuspendContextCommandImpl action, final LocatableEvent event) { final SuspendContextImpl context = action.getSuspendContext(); if(!isValid()) { context.getDebugProcess().getRequestsManager().deleteRequest(this); return true; } final String[] title = new... | 56598 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56598/6238dd84f46255cf0882e94da1def1882260e449/Breakpoint.java/clean/debugger/impl/com/intellij/debugger/ui/breakpoints/Breakpoint.java | [
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addExtras(page); | public void pageOpened(IWorkbenchPage page) { addExtras(page); } | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/61b31df4fb5ef9982fb2a0c9f3ba362c29665f00/PerspectiveSwitcher.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/PerspectiveSwitcher.java | [
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urlString += "GoAheadAndLogIn=1&Bugzilla_login=" | urlString += POST_ARGS_LOGIN_FIRST | public BugzillaQueryPageParser(TaskRepository repository, IProgressMonitor monitor) throws LoginException { this.monitor = monitor; // get the servers url urlString = repository.getUrl().toExternalForm() + "/query.cgi"; // if we are dealing with 2.18 we need to use the folowing in the // query string to get the r... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/efe136bc49630de13316a3de20a997050dd17c5b/BugzillaQueryPageParser.java/buggy/org.eclipse.mylyn.bugzilla.core/src/org/eclipse/mylyn/internal/bugzilla/core/search/BugzillaQueryPageParser.java | [
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context.getCurrentScope().setValue(argsNode.getBlockArgNode().getCount(), runtime.newProc(), 0); | blockArg = runtime.newProc(); blockArg.getBlock().isLambda = context.getCurrentBlock().isLambda; context.getCurrentScope().setValue(argsNode.getBlockArgNode().getCount(), blockArg, 0); | public IRubyObject internalCall(ThreadContext context, IRubyObject receiver, RubyModule lastClass, String name, IRubyObject[] args, boolean noSuper) { assert args != null; IRuby runtime = context.getRuntime(); if (argsNode.getBlockArgNode() != null && context.isBlockGiven()) { // We pas... | 48300 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48300/89deff9d4f0069e00009c8b39bbd472b68ef94d9/DefaultMethod.java/buggy/src/org/jruby/internal/runtime/methods/DefaultMethod.java | [
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_serverHost = "localhost"; _serverPort = 4321; | _serverHost = Config.getString("SERVER_HOST"); _serverPort = Integer.parseInt(Config.getString("SERVER_PORT")); | public void start(IManagerEngine managerEngine) { _managerEngine = managerEngine; _serverHost = "localhost"; _serverPort = 4321; initRMI(); } | 12741 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12741/181c127bacba1db8ffefb7c4a63ba737fb405ee2/ClientController.java/clean/src/salomon/controller/ClientController.java | [
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keys[ivaluesShift + index] = value; | values[index] = value; | public void put(int key, int value) { if (key < 0) Kit.codeBug(); int index = ensureIndex(key, true); if (ivaluesShift == 0) { int N = 1 << power; // keys.length can be N * 2 after clear which set ivaluesShift to 0 if (keys.length != N * 2) { int[... | 13991 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13991/69072d60f2dff69483df81af0b7c4377af80f832/UintMap.java/buggy/js/rhino/src/org/mozilla/javascript/UintMap.java | [
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szptr[wr] = (short)RUNB; | szptr[wr] = (short) RUNB; | private void generateMTFValues() { char[] yy = new char[256]; int i, j; char tmp; char tmp2; int zPend; int wr; int EOB; makeMaps(); EOB = nInUse+1; for (i = 0; i <= EOB; i++) { mtfFreq[i] = 0; } wr = 0; zPend = 0... | 506 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/506/6154080061f869b4e425d608da3bd61fad967564/CBZip2OutputStream.java/buggy/src/main/org/apache/tools/bzip2/CBZip2OutputStream.java | [
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Log.log(Log.TRACE, MODULE, "Adding to cache: " + filename); | Log.log(Log.LEVEL_TRACE, MODULE, "Adding to cache: " + filename); | public ImageIcon getSizedIconForce(String filename) { ImageIcon r = (ImageIcon) imageIcons.get(filename); if (r == null) { r = ImageUtils.load( filename, getRootPane().getSize(), ImageUtils.PREVIEW); Log.log(Log.TRACE, MODULE, "Adding to cache: " + filename); imageIcons.put(filename, r); } return... | 5431 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5431/1faa1edcd69ba6f773ebcc5a8a21f029bd9e2263/PreviewFrame.java/buggy/gallery_remote/com/gallery/GalleryRemote/PreviewFrame.java | [
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return DXFConstants.ENTITY_TYPE_HATCH; } | return DXFConstants.ENTITY_TYPE_HATCH; } | public String getDXFEntityName() { return DXFConstants.ENTITY_TYPE_HATCH; } | 4096 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4096/97da13d420d72405018ba732b60712bffbfe3482/DXFHatchHandler.java/clean/src/java/org/kabeja/parser/entities/DXFHatchHandler.java | [
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public void setThreshold(Level threshold) { | public void setThreshold(final Priority threshold) { | public void setThreshold(Level threshold) { this.threshold = threshold; } | 45952 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45952/943932182707a535e4db0e2847ee1fd56bb544a2/AppenderSkeleton.java/buggy/src/java/org/apache/log4j/AppenderSkeleton.java | [
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protected Membership(Owner o, Member m, Field f, Composite via) throws ModelException { this.setOwner_id( o ); this.setMember_id( m ); this.setField( f ); this.setUuid( GrouperUuid.getUuid() ); this.setDepth( ... | private Membership() { } | protected Membership(Owner o, Member m, Field f, Composite via) throws ModelException { this.setOwner_id( o ); this.setMember_id( m ); this.setField( f ); this.setUuid( GrouperUuid.getUuid() ); ... | 5235 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5235/11170f2a782492e4c1e43aa1adabfc484a62c9f3/Membership.java/buggy/grouper/src/grouper/edu/internet2/middleware/grouper/Membership.java | [
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if ( j < seda.length - 1 ) | if ( j < seda.length - 1 && k < liha.length ) | public void renderLegend( IPrimitiveRenderer ipr, Legend lg, Map htRenderers ) throws ChartException { if ( !lg.isVisible( ) ) // CHECK VISIBILITY { return; } renderBlock( ipr, lg, StructureSource.createLegend( lg ) ); final IDisplayServer xs = getDevice( ).getDisplayServer( ); final double dScale = getDevic... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/77cd1486b3c02afdf48daa502282ec72dded2287/BaseRenderer.java/buggy/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/render/BaseRenderer.java | [
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if (target.equals(SYSTEM_ERR)) { setWriter(createWriter(new SystemErrStream())); | if (honorReassignment) { if (target.equals(SYSTEM_ERR)) { setWriter(createWriter(new SystemErrStream())); } else { setWriter(createWriter(new SystemOutStream())); } | public void activateOptions() { if (target.equals(SYSTEM_ERR)) { setWriter(createWriter(new SystemErrStream())); } else { setWriter(createWriter(new SystemOutStream())); } super.activateOptions(); } | 45952 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45952/0bccb727fcc66aea5fdb08eeb88c49e225e1be6f/ConsoleAppender.java/clean/src/java/org/apache/log4j/ConsoleAppender.java | [
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ZimbraSoapContext lc = getZimbraSoapContext(context); Mailbox mbox = getRequestedMailbox(lc); SoapSession session = (SoapSession) lc.getSession(SessionCache.SESSION_SOAP); | ZimbraSoapContext zsc = getZimbraSoapContext(context); Mailbox mbox = getRequestedMailbox(zsc); SoapSession session = (SoapSession) zsc.getSession(SessionCache.SESSION_SOAP); | protected String handleCommon(Map<String,Object> context, Element request, String opAttr, byte type) throws ServiceException, SoapFaultException { Element action = request.getElement(MailService.E_ACTION); ZimbraSoapContext lc = getZimbraSoapContext(context); Mailbox mbox = getRequestedMailbox(... | 6965 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6965/5a87f1017874e82d94f5f796590f7852412eb78f/ItemAction.java/buggy/ZimbraServer/src/java/com/zimbra/cs/service/mail/ItemAction.java | [
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for (int i = 0; i < intArrayCache.length; i++) { if (intArrayCache[i].length == points.length) { scaled = intArrayCache[i]; if (i != 0) { int[] temp = intArrayCache[i - 1]; intArrayCache[i - 1] = scaled; intArrayCache[i] = temp; } | for (int i = 0; i < intArrayCache.length; i++) { if (intArrayCache[i].length == points.length) { scaled = intArrayCache[i]; if (i != 0) { int[] temp = intArrayCache[i - 1]; intArrayCache[i - 1] = scaled; intArrayCache[i] = temp; | private int[] zoomPointList(int[] points) { int[] scaled = null; // Look in cache for a integer array with the same length as 'points' for (int i = 0; i < intArrayCache.length; i++) { if (intArrayCache[i].length == points.length) { scaled = intArrayCache[i]; // Move this integer array up one notch in th... | 1758 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1758/f20e4ebd8a3904e04ab820488e31d606bbb2e6be/ScaledGraphics.java/clean/org.eclipse.gmf.runtime/plugins/org.eclipse.gmf.runtime.draw2d.ui/src/org/eclipse/gmf/runtime/draw2d/ui/internal/graphics/ScaledGraphics.java | [
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lStream = (RubyIO) ruby.getGlobalVariables().get("$stderr"); lStream.reopen(new RubyIO(ruby, out), null); | ruby.getGlobalVariables().set("$stderr", lStream); | protected String eval(String script) throws Exception { ByteArrayOutputStream result = new ByteArrayOutputStream(); out = new PrintStream(result); RubyIO lStream = new RubyIO(ruby, out); ruby.getGlobalVariables().set("$stdout", lStream); ruby.getGlobalVariables().set("$>", lStrea... | 49476 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49476/8e861cae108c2a87229f94b4f781699719c6ced9/TestRubyBase.java/clean/test/org/jruby/test/TestRubyBase.java | [
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if ((0x2400L & l) != 0L && kind > 22) kind = 22; | if ((0x2400L & l) != 0L && kind > 23) kind = 23; | private final int jjMoveNfa_0(int startState, int curPos){ int[] nextStates; int startsAt = 0; jjnewStateCnt = 12; int i = 1; jjstateSet[0] = startState; int j, kind = 0x7fffffff; for (;;) { if (++jjround == 0x7fffffff) ReInitRounds(); if (curChar < 64) { long l = 1L << cu... | 55820 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55820/983675edbbab0e381643fec9c2a3e765c2f88830/ParserTokenManager.java/buggy/src/java/org/apache/velocity/runtime/parser/ParserTokenManager.java | [
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labelMap.put("query", tp.parse("")); labelMap.put("subject", tp.parse("")); | GappedSymbolListBuilder gslBuilder = new GappedSymbolListBuilder(alpha); labelMap.put(SeqSimilaritySearchSubHit.QUERY_LABEL, gslBuilder.makeGappedSymbolList(querySeqTokens)); labelMap.put(subjectSeqID, gslBuilder.makeGappedSymbolList(subjectSeqTokens)); | private Alignment createAlignment(Map dataMap) throws IllegalSymbolException { String seqType = (String) dataMap.get("query"); FiniteAlphabet alpha; // What happens if Fasta is given an RNA sequence? if (seqType.equals("dna")) alpha = DNATools.getDNA(); else alpha = ProteinTools.getAlphabet(); TokenParse... | 50397 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50397/12a0a4afbfea0fc76b108f88303a4155d35e4cd9/FastaSearchBuilder.java/buggy/src/org/biojava/bio/program/search/FastaSearchBuilder.java | [
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switch ( eDerivedStructuralFeatureID( eFeature ) ) | switch ( featureID ) | public void eUnset( EStructuralFeature eFeature ) { switch ( eDerivedStructuralFeatureID( eFeature ) ) { case ComponentPackage.LABEL__CAPTION : setCaption( (Text) null ); return; case ComponentPackage.LABEL__BACKGROUND : setBackground( (Fill) null ); return; case ComponentPackage.LABEL__OUTLINE : ... | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/036e8c78765730b146e5854b9d6c397a296fed86/LabelImpl.java/clean/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/model/component/impl/LabelImpl.java | [
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public CheckboxTreeViewer(Tree tree) { super(tree); | public CheckboxTreeViewer(Composite parent) { this(parent, SWT.BORDER); | public CheckboxTreeViewer(Tree tree) { super(tree); } | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/5abf6fabfddc9bb4eb33acac1f3b4c05f76ac7b1/CheckboxTreeViewer.java/buggy/bundles/org.eclipse.jface/src/org/eclipse/jface/viewers/CheckboxTreeViewer.java | [
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int fieldWidth = 14; int firstField = 25; NumberFormatter formatter = new NumberFormatter(6); formatter.setPadding(true); formatter.setFieldWidth(fieldWidth); TraceAnalysis[] analysis = analyzeLogFile(reader, burnin); int maxState = analysis[0].maxState; burnin = analysis[0].burnin; System.out.println(); System.out.... | return report(new FileReader(fileName), -1); | public static TraceAnalysis[] report(Reader reader, int burnin) throws java.io.IOException { int fieldWidth = 14; int firstField = 25; NumberFormatter formatter = new NumberFormatter(6); formatter.setPadding(true); formatter.setFieldWidth(fieldWidth); TraceAnalysis[] analysis = analyzeLogFile(reader, burnin); i... | 49053 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49053/207ad71275251a810a4442123060c17d2d9115a6/TraceAnalysis.java/buggy/trunk/src/dr/inference/trace/TraceAnalysis.java | [
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if (jj_3R_272()) return true; | if (jj_3R_273()) return true; | final private boolean jj_3R_255() { if (jj_3R_272()) return true; return false; } | 41673 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/41673/ac9207dcb7a8bbf54f85da7f1bdae7d7162b86b3/JavaParser.java/buggy/pmd/src/net/sourceforge/pmd/ast/JavaParser.java | [
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preferences.use_tab = true; | preferences.tab_char = DefaultCodeFormatterOptions.TAB; | public void test177() { DefaultCodeFormatterOptions preferences = new DefaultCodeFormatterOptions(DefaultCodeFormatterConstants.getEclipse21Settings()); preferences.use_tab = true; preferences.insert_new_line_in_empty_anonymous_type_declaration = false; preferences.insert_new_line_in_empty_type_declaration = false... | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/c6f78f890c1ca00b0157b632da091fae2c781833/FormatterRegressionTests.java/buggy/org.eclipse.jdt.core.tests.model/src/org/eclipse/jdt/core/tests/formatter/FormatterRegressionTests.java | [
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job.setProperty(ProgressManager.PROPERTY_IN_DIALOG, new Boolean(false)); | job.setProperty(IProgressConstants.PROPERTY_IN_DIALOG, Boolean.FALSE); | public void widgetSelected(SelectionEvent e) { Rectangle shellPosition = getShell().getBounds(); job.setProperty(ProgressManager.PROPERTY_IN_DIALOG, new Boolean(false)); decrementNestingDepth(); close(); ProgressManagerUtil.animateDown(shellPosition); } | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/d2fca7489c425174f085a917cb67b164a68147ba/ProgressMonitorFocusJobDialog.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/progress/ProgressMonitorFocusJobDialog.java | [
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if (queue.size() >= qProfile.getMaxOutstandingMessages()) { logger.trace("process maxQueueSize reached:" + qProfile.getMaxOutstandingMessages()); while (queue.size() >= qProfile.getMaxOutstandingMessages()) { synchronized (queue) { try { Thread.yield(); queue.wait(qProfile.getBlockWait()); } catch (Exception ie) { } ... | if (logger.isTraceEnabled()) { if (queue.size() >= qProfile.getMaxOutstandingMessages()) { logger.trace("process maxQueueSize reached:" + qProfile.getMaxOutstandingMessages()); } } | public void dispatchEvent(UMOEvent event) throws UMOException { if(!event.getEndpoint().canReceive()) { UMOMessageDispatcher dispatcher = event.getEndpoint().getConnector().getDispatcher(event.getEndpoint().getEndpointURI().getAddress()); try { dispatcher.di... | 2370 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2370/cedf2fc1e9973b1ed339f2698bf2a2085f7cca7e/MuleComponent.java/clean/src/java/org/mule/impl/MuleComponent.java | [
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void parseSchemas(String sLocation, String nsLocation) { if (sLocation != null) { StringTokenizer t = new StringTokenizer(sLocation, " \n\t\r"); String namespace, location; while (t.hasMoreTokens()) { namespace = fSymbolTable.addSymbol(t.nextToken ()); ... | 6373 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6373/cf8fca03a702621ccd014c61dde15932b0f3b075/XMLSchemaValidator.java/clean/src/org/apache/xerces/impl/xs/XMLSchemaValidator.java | [
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public org.quickfix.field.EncodedText getEncodedText() throws FieldNotFound { org.quickfix.field.EncodedText value = new org.quickfix.field.EncodedText(); | public quickfix.field.EncodedText getEncodedText() throws FieldNotFound { quickfix.field.EncodedText value = new quickfix.field.EncodedText(); | public org.quickfix.field.EncodedText getEncodedText() throws FieldNotFound { org.quickfix.field.EncodedText value = new org.quickfix.field.EncodedText(); getField(value); return value; } | 5926 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5926/fecc27f98261270772ff182a1d4dfd94b5daa73d/ConfirmationAck.java/clean/src/java/src/quickfix/fix44/ConfirmationAck.java | [
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public void doPost( HttpServletRequest req, HttpServletResponse res ) throws ServletException, IOException { String host = req.getHeader("Host") ; String imcserver = Utility.getDomainPref("adminserver",host) ; HttpSession session = req.getSession(true); imcode.server.User user = (imcode.serv... | 8781 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8781/5809d66a25d58d7ffad1cd1d9aa41c714fbcef76/SearchDocuments.java/buggy/servlets/SearchDocuments.java | [
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final List<Registration> students = new ArrayList(); final String studentNameToMatch = (studentName == null) ? null : studentName.replaceAll("%", ".*").toLowerCase(); | final List<Registration> students = new ArrayList(); final String studentNameToMatch = (studentName == null) ? null : studentName.replaceAll("%", ".*").toLowerCase(); | public static List<Registration> readMasterDegreeStudentsByNameDocIDNumberIDTypeAndStudentNumber( String studentName, String docIdNumber, IDDocumentType idType, Integer studentNumber) { final List<Registration> students = new ArrayList(); final String studentNameToMatch = (studentName == nu... | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/d83eed7dcec4610dc885bab30a7b9585bd9bbc41/Registration.java/buggy/src/net/sourceforge/fenixedu/domain/student/Registration.java | [
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throw ScriptRuntime.typeError1("msg.isnt.function", debugName); | throw ScriptRuntime.notFunctionError(notAFunction, debugName); | static RuntimeException notAFunction(Object notAFunction, InterpreterData idata, int namePC) { String debugName; if (notAFunction == Undefined.instance || notAFunction == null) { // special code for better error message for call // to un... | 12376 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12376/11ce08544db8e939610fd279089ebe3b0ecc910a/Interpreter.java/clean/js/rhino/src/org/mozilla/javascript/Interpreter.java | [
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group.setCompanyId(user.getCompanyId()); | group.setCompanyId(user.getActualCompanyId()); | public Group addGroup( String userId, String className, String classPK, String name, String friendlyURL) throws PortalException, SystemException { // Group User user = UserUtil.findByPrimaryKey(userId); if (Validator.isNull(className) || Validator.isNull(classPK)) { validateName(null, user.getCompanyId(), na... | 57692 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57692/d925182e05cec482509796900e4f310648a730aa/GroupLocalServiceImpl.java/clean/portal-ejb/src/com/liferay/portal/service/impl/GroupLocalServiceImpl.java | [
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VM_Statics.setSlotContents(tibSlot, typeInformationBlock); | VM_Statics.setSlotContents(getTibOffset(), typeInformationBlock); | public final synchronized void resolve() { if (isResolved()) return; if (VM.VerifyAssertions) VM._assert(state == CLASS_LOADED); elementType.resolve(); // Using the type information block for java.lang.Object as a template, // build a type information block for this new array type by copying the ... | 5245 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5245/ea6b401d82469a044d9cebd971fa06a82c817f01/VM_Array.java/clean/rvm/src/vm/classLoader/VM_Array.java | [
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int priority = Integer.parseInt(Util.getProperty(name, (IMarker) obj)); | int priority = ((TaskMarker)obj).getPriority(); | public Image getImage(Object obj) { if (obj == null || !(obj instanceof IMarker)) { return null; } try { int priority = Integer.parseInt(Util.getProperty(name, (IMarker) obj)); if (priority == IMarker.PRIORITY_HIGH) { return ImageFactory.getImage(HIGH_PRIORITY_IMAGE_PATH); } if (priority == IMarker.PRI... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/ea57ee1b804071939d5791d4c2986826074efe0c/FieldPriority.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/views/markers/internal/FieldPriority.java | [
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public Configuration(Target target, IConfiguration parent, String id) { | public Configuration(Target target, String id) { | public Configuration(Target target, IConfiguration parent, String id) { this.id = id; this.name = parent.getName(); this.target = target; this.parent = parent; target.addConfiguration(this); } | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/64911fc1866b9c6b6e225e0b5a4a474e69208f7c/Configuration.java/clean/core/org.eclipse.cdt.core/build/org/eclipse/cdt/internal/core/build/managed/Configuration.java | [
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return this.closure.asWritable(); } | return this.closure.asWritable(); } | public Closure asWritable() { return this.closure.asWritable(); } | 6462 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6462/9411e347dd46bbc42695d463bec72ecaed0a490a/Closure.java/clean/src/main/groovy/lang/Closure.java | [
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public JComponent createButtonToolbar(final String actionPlace, final ActionGroup messageActionGroup) { return new ButtonToolbarImpl(actionPlace, messageActionGroup, myDataManager, this); } | 56627 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56627/4972de74093751aa507c641e7a852c8feb15d5e3/ActionManagerImpl.java/clean/action-system/impl/com/intellij/openapi/actionSystem/impl/ActionManagerImpl.java | [
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QueryRequest query=new QueryRequest(guid, (byte)3, 0, "test query", false); | QueryRequest query = QueryRequest.createQuery("test query", (byte)3); | public void testDisallow() { guid[0]=(byte)0x41; guid[1]=(byte)0x61; guid[2]=(byte)0x42; guid[3]=(byte)0x62; guid[4]=(byte)0x5A; QueryRequest query=new QueryRequest(guid, (byte)3, 0, "test query", false); assertTrue(! filter... | 5134 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5134/a121b4703d1995e0940e14e0fbfac71b81d2415c/GUIDFilterTest.java/clean/components/gnutella-core/src/test/java/com/limegroup/gnutella/filters/GUIDFilterTest.java | [
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jj_la1[60] = jj_gen; | jj_la1[72] = jj_gen; | final public void MultiplicativeExpression() throws ParseException { /*@bgen(jjtree) MultiplicativeExpression */ ASTMultiplicativeExpression jjtn000 = new ASTMultiplicativeExpression(this, JJTMULTIPLICATIVEEXPRESSION); boolean jjtc000 = true; jjtree.openNodeScope(jjtn000); try { UnaryExpression(); ... | 41673 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/41673/1d8de6b34ea0ddb64fc94b478c0950c0d35de605/JavaParser.java/buggy/pmd/src/net/sourceforge/pmd/ast/JavaParser.java | [
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rubyClass.getSingletonClass().addMethod(iVisited.getName(), newMethod, Constants.NOEX_PUBLIC); | rubyClass.getSingletonClass().addMethod(iVisited.getName(), new WrapperCallable(newMethod, Visibility.PUBLIC)); | public void visitDefnNode(DefnNode iVisited) { RubyModule rubyClass = ruby.getRubyClass(); if (rubyClass == null) { throw new TypeError(ruby, "No class to add method."); } //if (ruby_class == getRuby().getObjectClass() && node.nd_mid() == init) { // warn("redefining Obj... | 47984 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47984/f05423516c2d1bfe54c4363eedb9654f7cfb6898/EvaluateVisitor.java/clean/org/jruby/evaluator/EvaluateVisitor.java | [
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