rem stringlengths 1 53.3k | add stringlengths 0 80.5k | context stringlengths 6 326k | meta stringlengths 141 403 | input_ids list | attention_mask list | labels list |
|---|---|---|---|---|---|---|
if (!validateLabel(label)) | if (!validateLabel(label)) { | public PerspectiveDescriptor createPerspective(String label, PerspectiveDescriptor originalDescriptor) { // Sanity check to avoid invalid or duplicate labels. if (!validateLabel(label)) return null; if (findPerspectiveWithLabel(label) != null) return null; // Calculate ID. String id = label.replace(' ', '_'... | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/fa4a8cff0e027f8d3c6b1fcb92b30f46767dd191/PerspectiveRegistry.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/registry/PerspectiveRegistry.java | [
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String cmsfolder=(String)(((Hashtable)userObject).get("cmsfolder")); | protected String buildNavFold(CmsObject cms, CmsXmlTemplateFile xmlDataBlock, Object userObject, Vector resources, String requestedUri, String currentFolder, String servletPath,int level) throws CmsException { String cmsfolder=(String)(((Hashtable)userObject).get("cmsfolder")); StringBuffer result = new StringBuffe... | 51784 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51784/e830ba5cf98ad761b43337a5f53977c1a7689de2/CmsXmlNav.java/buggy/src/com/opencms/defaults/CmsXmlNav.java | [
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protected void doDSPost(Context context, HttpServletRequest request, HttpServletResponse response) throws ServletException, IOException, SQLException, AuthorizeException { String button = UIUtil.getSubmitButton(request, "submit"); if (button.equals("submit_add")) { ... | 1868 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1868/17bfff55651a6ca573f417ccc16fe4feb8e889e9/EPersonAdminServlet.java/buggy/dspace/src/org/dspace/app/webui/servlet/admin/EPersonAdminServlet.java | [
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return new ASTUsingDirective( scope, duple.toString(), startingOffset, startingLine, endingOffset, endingLine, duple.getFilename() ); | return new ASTUsingDirective( scope, duple.toString(), startingOffset, startingLine, endingOffset, endingLine, duple.getFilename(), duple.getStartOffset(), duple.getEndOffset(), duple.getLineNumber() ); | public IASTUsingDirective createUsingDirective(IASTScope scope, ITokenDuple duple, int startingOffset, int startingLine, int endingOffset, int endingLine) { return new ASTUsingDirective( scope, duple.toString(), startingOffset, startingLine, endingOffset, endingLine, duple.getFilename() ); } | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/9ac724d2edcb3085225e8e4e3281e34bca88c97d/QuickParseASTFactory.java/clean/core/org.eclipse.cdt.core/parser/org/eclipse/cdt/internal/core/parser/ast/quick/QuickParseASTFactory.java | [
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public void mBOOL() throws RecognitionException { try { ruleNestingLevel++; int _type = BOOL; int _start = getCharIndex(); int _line = getLine(); int _charPosition = getCharPositionInLine(); int _channel = Token.DEFAULT_CHANNEL; // ... | 31577 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/31577/6b34eb3854fdc06f31034567ebdf72ff28c6c11a/DRLLexer.java/buggy/drools-compiler/src/main/java/org/drools/lang/DRLLexer.java | [
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void lostTaskTracker(String trackerName) { | void lostTaskTracker(String trackerName, String hostname) { | void lostTaskTracker(String trackerName) { LOG.info("Lost tracker '" + trackerName + "'"); TreeSet lostTasks = (TreeSet) trackerToTaskMap.get(trackerName); trackerToTaskMap.remove(trackerName); if (lostTasks != null) { for (Iterator it = lostTasks.iterator(); it.hasNext(); ) {... | 50331 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50331/50de9d51b6043b8802f1ca8befb218affb724fab/JobTracker.java/clean/src/java/org/apache/hadoop/mapred/JobTracker.java | [
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public void setProjectChanged() { | public void setProjectChanged(boolean changed) { | public FileGroupingState _makeFlatFileGroupingState() { return new FileGroupingState(){ public File getBuildDirectory(){ return null; } public boolean isProjectActive(){ return false; } public boolean isInProjectPath(OpenDefinitionsDocument doc){ return fal... | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/297ab8f541fdccc79367d02c322b7113ca0c7fca/DefaultGlobalModel.java/buggy/drjava/src/edu/rice/cs/drjava/model/DefaultGlobalModel.java | [
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JToolBar bar = new JToolBar(); bar.setFloatable(false); bar.setRollover(true); | JPanel bar = new JPanel(); | private JPanel buildToolBar() { JToolBar bar = new JToolBar(); bar.setFloatable(false); bar.setRollover(true); bar.add(cancelButton); bar.add(saveButton); return UIUtilities.buildComponentPanelRight(bar); } | 13273 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13273/3b273af3a5320ab0a054540f14a3c299ff01de69/ImgSaverPreviewer.java/buggy/SRC/org/openmicroscopy/shoola/agents/imviewer/util/saver/ImgSaverPreviewer.java | [
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props.put( n, v ); | if( "jkHome".equals( n ) ) { setJkHome( v ); } else { props.put( n, v ); } | public void setProperty( String n, String v ) { props.put( n, v ); } | 10630 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10630/e47db653f172ca87f95ebe47ee063a57731debe3/JkMain.java/buggy/java/org/apache/jk/server/JkMain.java | [
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tempFile = File.createTempFile(prefix, suffix); | file = File.createTempFile(prefix, suffix); | public synchronized void sfDeploy() throws SmartFrogException, RemoteException { super.sfDeploy(); String prefix = sfResolve(ATTR_PREFIX, "", true); if(prefix.length()==0) { throw new SmartFrogException(ERROR_PREFIX_EMPTY,this); } String suffix = sfResolve(ATTR_SUFFIX, ... | 4987 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4987/112507e56b6b43d363ff3e314a2983b00b18d2cf/TempFileImpl.java/clean/core/smartfrog/src/org/smartfrog/services/filesystem/TempFileImpl.java | [
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if (categoryAbbrev != null) outputStream.print(categoryAbbrev); | if (categoryAbbrev == null) categoryAbbrev = OTHER_CATEGORY_ABBREV; outputStream.print(categoryAbbrev); | protected void printBug(BugInstance bugInstance) { switch (bugInstance.getPriority()) { case Detector.EXP_PRIORITY: outputStream.print("E "); break; case Detector.LOW_PRIORITY: outputStream.print("L "); break; case Detector.NORMAL_PRIORITY: outputStream.print("M "); break; case Detector.HIGH_PRIORITY:... | 7352 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7352/b9e9e50bf107c802e67ebec6cabda4b1c7099078/TextUIBugReporter.java/buggy/findbugs/src/java/edu/umd/cs/findbugs/TextUIBugReporter.java | [
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User cUser = UserDirectoryService.getCurrentUser(); | private void sendSiteRequest(SessionState state, String request, int requestListSize, List requestFields) { boolean sendEmailToRequestee = false; StringBuffer buf = new StringBuffer(); // get the request email from configuration String requestEmail = ServerConfigurationService.getString("setup.request", null); ... | 54846 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54846/c056181efb440533c058b7fd915da25fb81424b9/SiteAction.java/buggy/site-manage-tool/tool/src/java/org/sakaiproject/site/tool/SiteAction.java | [
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public BigInteger pow(int exponent) | private BigInteger pow(BigInteger y) | public BigInteger pow(int exponent) { if (exponent <= 0) { if (exponent == 0) return ONE; else throw new ArithmeticException("negative exponent"); } if (isZero()) return this; int plen = words == null ? 1 : ival; // Length of pow2. int blen = ((bitLength() * exponent) >> 5) + 2 * plen... | 45163 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45163/4e141f35458b612b492f1f4dd6fb28d4924e7828/BigInteger.java/buggy/libjava/java/math/BigInteger.java | [
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setModified(true); | public void setCreateDate(Date createDate) { if (((createDate == null) && (_createDate != null)) || ((createDate != null) && (_createDate == null)) || ((createDate != null) && (_createDate != null) && !createDate.equals(_createDate))) { _createDate = createDate; setModified(true); } } | 53908 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53908/f4d6afc6707f57fd84bf6b624f0c119657b0a766/EmailAddressModel.java/buggy/portal-ejb/src/com/liferay/portal/model/EmailAddressModel.java | [
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hc = ObjectUtil.hashCode(hc, searchResult); hc = ObjectUtil.hashCode(hc, score); hc = ObjectUtil.hashCode(hc, pValue); hc = ObjectUtil.hashCode(hc, eValue); hc = ObjectUtil.hashCode(hc, sequenceID); hc = ObjectUtil.hashCode(hc, subHits); | hc = ObjectUtil.hashCode(hc, searchResult); hc = ObjectUtil.hashCode(hc, score); hc = ObjectUtil.hashCode(hc, pValue); hc = ObjectUtil.hashCode(hc, eValue); hc = ObjectUtil.hashCode(hc, sequenceID); hc = ObjectUtil.hashCode(hc, subHits); | public int hashCode() { // if this class is a direct sub-class of Object: int hc = 0; // only take into account fields of this class (not of super-class): hc = ObjectUtil.hashCode(hc, searchResult); hc = ObjectUtil.hashCode(hc, score); hc = ObjectUtil.hashCode(hc, pValue); hc = ObjectUtil.hashCod... | 50115 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50115/1e53e34b25e9b009c50460af0986e9449f82ece1/SimpleSeqSimilaritySearchHit.java/buggy/src/org/biojava/bio/search/SimpleSeqSimilaritySearchHit.java | [
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return getValue().compareTo(bigIntValue(other)); } | return getValue().compareTo(bigIntValue(other)); } | protected int compareValue(RubyNumeric other) { if (other instanceof RubyFloat) { double otherVal = other.getDoubleValue(); double thisVal = getDoubleValue(); return thisVal > otherVal ? 1 : thisVal < otherVal ? -1 : 0; } return getValue().compareTo(bigIntValue(... | 50993 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50993/1cc89bd397c0f049e6fa3045916fd6d9a3cdada8/RubyBignum.java/buggy/org/jruby/RubyBignum.java | [
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Scope oldScope = (Scope)getScope().getTop(); | Scope oldScope = (Scope) getScope().getTop(); | public RubyObject yield0(RubyObject value, RubyObject self, RubyModule klass, boolean acheck) { if (!isBlockGiven()) { throw new RaiseException(this, "LocalJumpError", "yield called out of block"); } RubyVarmap.push(this); pushClass(); RubyBlock tmpBlock = block.getTmp(... | 49687 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49687/4e4bb40b2eb2d38881d15ca8ef7cda4c34323793/Ruby.java/clean/org/jruby/Ruby.java | [
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return ""; | return ""; | private String getHrefString() { if (this.href == null) { return ""; } return " href=\"" + this.href.toString() + "\""; } | 7284 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7284/101977ad06aad488b3652f70bcee7359487e87db/Anchor.java/buggy/displaytag/src/main/java/org/displaytag/util/Anchor.java | [
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return isbn; | return isbn; | public Integer getIsbn() { return isbn; } | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/f2ed60b5417a9a7d4bcf5fcf0cdc3f70cc3c9b8f/BookBean.java/buggy/src/net/sourceforge/fenixedu/dataTransferObject/research/result/publication/BookBean.java | [
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if (typeSignature.length() < 1) { | if (typeSignature.length < 1) { | public static int getTypeSignatureKind(String typeSignature) { // need a minimum 1 char if (typeSignature.length() < 1) { throw new IllegalArgumentException(); } char c = typeSignature.charAt(0); switch (c) { case C_ARRAY : return ARRAY_TYPE_SIGNATURE; case C_RESOLVED : case C_UNRESOLVED : return CLASS_TYPE_SIG... | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/15e62f7752b5ba1cd51b3fafb5a3b0c9d1ba5891/Signature.java/buggy/org.eclipse.jdt.core/model/org/eclipse/jdt/core/Signature.java | [
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for (int i = 0; i < arity; i++) { if (i > 0) writer.print(", "); | for (int i = 1; i <= arity; i++) { if (i > 1) writer.print(", "); | public void printVParams() { for (int i = 0; i < arity; i++) { if (i > 0) writer.print(", "); writer.print("_").print(i).print(": T").print(i); } } | 10130 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10130/32782e0e28c9d2538b2e597e986a78c22960fc32/MetaTuple.java/clean/sources/meta/scala/MetaTuple.java | [
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out.write((int) buf.length); out.write(buf); | if (buf.length > 0) { out.write((int) buf.length); out.write(buf); } else { out.write((int) 1); out.write((byte) 0); } | static void writeTds5Param(RequestStream out, String charset, ParamInfo pi) throws IOException, SQLException { switch (pi.tdsType) { case SYBVARCHAR: if (pi.value == null) { out.write((byte) 0); ... | 439 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/439/2f1fefd2c51a632b432cc7be26cc8ec087a63c02/TdsData.java/buggy/trunk/jtds/src/main/net/sourceforge/jtds/jdbc/TdsData.java | [
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} IBuilder builder = toolChain.getBuilder(); if (builder != null) { if (forCurrentMbsVersion) { element = ((Builder)builder).getCurrentMbsVersionConversionElement(); } else { element = ((Builder)builder).getPreviousMbsVersionConversionElement(); } if (element != null) { if ( invokeConverter(builder, element) == null )... | IBuilder builder = toolChain.getBuilder(); if (builder != null) { if (forCurrentMbsVersion) { element = ((Builder) builder) .getCurrentMbsVersionConversionElement(); } else { element = ((Builder) builder) .getPreviousMbsVersionConversionElement(); | private static boolean checkForMigrationSupport(ManagedBuildInfo buildInfo, boolean forCurrentMbsVersion) { IConfigurationElement element = null; // Get the managed project from buildInfo IManagedProject managedProject = buildInfo.getManagedProject(); // walk through the hierarchy of the project and // call ... | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/e2ab8aa66bc9088cb3702adfb1981078a8f4bbf2/ManagedBuildManager.java/buggy/build/org.eclipse.cdt.managedbuilder.core/src/org/eclipse/cdt/managedbuilder/core/ManagedBuildManager.java | [
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AST __t1272 = _t; AST tmp1702_AST_in = (AST)_t; | AST __t1257 = _t; AST tmp1714_AST_in = (AST)_t; | public final void droptablestate(AST _t) throws RecognitionException { AST droptablestate_AST_in = (_t == ASTNULL) ? null : (AST)_t; AST __t1272 = _t; AST tmp1702_AST_in = (AST)_t; match(_t,DROP); _t = _t.getFirstChild(); AST tmp1703_AST_in = (AST)_t; match(_t,TABLE); _t = _t.getNextSibling(); tbl(_t,CQ.S... | 13952 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13952/daa15e07422d3491bbbb4d0060450c81983332a4/TreeParser01.java/buggy/trunk/org.prorefactor.core/src/org/prorefactor/treeparser01/TreeParser01.java | [
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return minValue; } | return minValue; } | public Comparable getMinValue() { return minValue; } | 47932 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47932/91bf32c7ef327c04baa2d9f1dbd47505403a717e/ConstrainedProperty.java/clean/grails/src/commons/org/codehaus/groovy/grails/validation/ConstrainedProperty.java | [
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data = sourceData; | data = finalData; | static public ClientCHKBlock encode(byte[] sourceData, boolean asMetadata, boolean dontCompress, short alreadyCompressedCodec, int sourceLength) throws CHKEncodeException { byte[] data; byte[] header; ClientCHK key; short compressionAlgorithm = -1; // Try to compress it - even if ... | 46035 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46035/ee392a27cc3ce11b12a2fdda4a2f78861262883f/ClientCHKBlock.java/clean/src/freenet/keys/ClientCHKBlock.java | [
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final URL url = new URL(new URL(base), systemId); systemId = url.toString(); input = new InputSource(systemId); | final URL url = new URL(new URL(currLoadedDoc), docToLoad); docToLoad = url.toString(); input = new InputSource(docToLoad); | public void parseContents(final Parser parser) { final Stylesheet context = parser.getCurrentStylesheet(); try { String systemId = getAttribute("href"); if (context.checkForLoop(systemId)) { final int errno = ErrorMsg.CIRCULAR_INC; final ErrorMsg msg = new ErrorMsg(errno, systemId, this); parser.reportEr... | 2723 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2723/719e993d33fe3e56276bbbc1b136da4bfc1f71fb/Include.java/buggy/src/org/apache/xalan/xsltc/compiler/Include.java | [
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public Object run(BpelDAOConnection conn) throws Exception { | public Boolean run(BpelDAOConnection conn) throws Exception { | public Object run(BpelDAOConnection conn) throws Exception { ProcessDAO old = conn.getProcess(pid); if (old != null) { __log.debug("Found ProcessDAO for " + pid + " with GUID " + old.getGuid()); if (oprocess.guid != null... | 47044 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47044/52191e5eb3ba743fa248e1082e99fa68cc1ef2d2/BpelServerImpl.java/buggy/bpel-runtime/src/main/java/org/apache/ode/bpel/engine/BpelServerImpl.java | [
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final GlobalSearchScope projectScope = GlobalSearchScope.allScope(myManager.getProject()); final VirtualFile classRoot = projectFileIndex.getClassRootForFile(vFile); final GlobalSearchScope scope = new GlobalSearchScope() { public int compare(VirtualFile file1, VirtualFile file2) { final VirtualFile classRootForFile1 ... | public GlobalSearchScope getResolveScope(PsiElement element) { VirtualFile vFile; if (element instanceof PsiDirectory) { vFile = ((PsiDirectory)element).getVirtualFile(); } else { final PsiFile contextFile = ResolveUtil.getContextFile(element); if (contextFile == null || contextFile instanc... | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/d88b0d6e4538f617f5b687d2c93ed46f9f15ff35/FileManagerImpl.java/clean/source/com/intellij/psi/impl/file/impl/FileManagerImpl.java | [
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doc.documentSaved(); _saveAction.setEnabled(false); _revertAction.setEnabled(true); updateFileTitle(); _currentDefPane.requestFocusInWindow(); try { File f = doc.getFile(); if (! _model.isProjectFile(f)) _recentFileManager.updateOpenFiles(f); } catch (IllegalStateException ise) { throw new UnexpectedException(ise); } ... | Utilities.invokeLater(new Runnable() { public void run() { doc.documentSaved(); _saveAction.setEnabled(false); _revertAction.setEnabled(true); updateFileTitle(); _currentDefPane.requestFocusInWindow(); try { File f = doc.getFile(); if (! _model.isProjectFile(f)) _recentFileManager.updateOpenFiles(f); } catch (IllegalSt... | public void fileSaved(OpenDefinitionsDocument doc) {// new ScrollableDialog(null, "fileSaved called in ModelListener", "", "").show(); doc.documentSaved(); // used to update the document cache _saveAction.setEnabled(false); _revertAction.setEnabled(true); updateFileTitle(); _currentDe... | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/d1ffac675273323f7a1b9777462d16896d09a1af/MainFrame.java/clean/drjava/src/edu/rice/cs/drjava/ui/MainFrame.java | [
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private void dataBufferAppend (char c) { if (dataBufferPos >= dataBuffer.length) dataBuffer = (char[]) extendArray (dataBuffer, dataBuffer.length, dataBufferPos); dataBuffer [dataBufferPos++] = c; } | private void dataBufferAppend(char c) { if (dataBufferPos >= dataBuffer.length) { dataBuffer = (char[]) extendArray(dataBuffer, dataBuffer.length, dataBufferPos); } dataBuffer[dataBufferPos++] = c; } | private void dataBufferAppend (char c) { // Expand buffer if necessary. if (dataBufferPos >= dataBuffer.length) dataBuffer = (char[]) extendArray (dataBuffer, dataBuffer.length, dataBufferPos); dataBuffer [dataBufferPos++] = c; } | 56365 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56365/7fb7568e63c3fe14af521de4699cb37898923ca7/XmlParser.java/clean/libjava/gnu/xml/aelfred2/XmlParser.java | [
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runTest( "identifier and", new int[]{ IDENTIFIER, AND, EOF } ); | runTest( "identifier and", new int[]{ TokenTypes.IDENTIFIER, TokenTypes.AND, TokenTypes.EOF } ); | public void testOperatorAnd() { runTest( "identifier and", new int[]{ IDENTIFIER, AND, EOF } ); } | 5646 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5646/97414bf23bf62ff0ca98fd125e1e114268b99245/XPathLexerTokenTest.java/clean/src/java/test/org/jaxen/saxpath/base/XPathLexerTokenTest.java | [
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setValue(newStr); | setValue(new StringBuffer(newStr)); | public IRubyObject tr_bang(IRubyObject search, IRubyObject replace) { String newStr = tr(search, replace, false); if (newStr.equals(getValue())) { return getRuntime().getNil(); } setValue(newStr); return this; } | 46454 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46454/9f2efc63a858fa0507245b207025eab027840a04/RubyString.java/buggy/src/org/jruby/RubyString.java | [
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} | } | private IStatus proceedWithOperation(IUndoableOperation operation, IOperationHistory history, IAdaptable uiInfo, String message, boolean undoing) { // if the operation cannot tell us about its modified elements, there's // nothing we can do. if (!(operation instanceof IAdvancedUndoableOperation)) return Statu... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/d74a8cac12d331987ec843867ae9025700534a94/NonLocalUndoUserApprover.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/operations/NonLocalUndoUserApprover.java | [
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if (this.request == null) | if (this.request == null) { | public void setRequest(HttpServletRequest request) { this.request = request; if (this.request == null) setSession(null); else setSession(this.request.getSession()); } | 48068 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48068/ef68ef66f0feb3bc08bb217fe9abcd99045ef301/ConfigHelper.java/clean/src/share/org/apache/struts/config/ConfigHelper.java | [
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if (obj==null) throw new NullPointerException(); | private int get32Bits(Object obj) { if (isStatic()) { return VM_Statics.getSlotContentsAsInt(offset >>> LOG_BYTES_IN_INT); } else { if (obj==null) throw new NullPointerException(); return VM_Magic.getIntAtOffset(obj, offset); } } | 49871 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49871/73161e4dae0f3ded1857fa907d0bcad371a5c509/VM_Field.java/clean/rvm/src/vm/classLoader/VM_Field.java | [
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public void startInclusion(CodeReader reader, int offset, int endOffset); | public void startInclusion(CodeReader reader, int offset, int endOffset, int nameOffset, int nameEndoffset, char[] name, boolean systemInclude); | public void startInclusion(CodeReader reader, int offset, int endOffset); | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/df871fe06bd1191491f65b19014fc27782320263/IScannerPreprocessorLog.java/clean/core/org.eclipse.cdt.core/parser/org/eclipse/cdt/internal/core/parser/scanner2/IScannerPreprocessorLog.java | [
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classFile.startMethod("exec", | cfw.startMethod("exec", | private void generateExecute(Context cx) { classFile.startMethod("exec", "(Lorg/mozilla/javascript/Context;" +"Lorg/mozilla/javascript/Scriptable;" +")Ljava/lang/Object;", (short)(ClassFileW... | 13991 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13991/bd2594e6ebd6d8099b587934641c8f7650d87761/Codegen.java/buggy/js/rhino/src/org/mozilla/javascript/optimizer/Codegen.java | [
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if ((SAXDriver.FEATURE + "validation").equals (featureId)) { if (active) throw new SAXNotSupportedException ("already parsing"); if (state) forceValidating (); isValidating = state; } else aelfred2.setFeature (featureId, state); } | if ((SAXDriver.FEATURE + "validation").equals(featureId)) { if (active) { throw new SAXNotSupportedException("already parsing"); } if (state) { forceValidating(); } isValidating = state; } else { aelfred2.setFeature(featureId, state); } } | public void setFeature (String featureId, boolean state) throws SAXNotRecognizedException, SAXNotSupportedException { boolean value = getFeature (featureId); if (state == value) return; if ((SAXDriver.FEATURE + "validation").equals (featureId)) { if (active) throw new SAXNotSupportedException ("alrea... | 13625 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13625/7fb7568e63c3fe14af521de4699cb37898923ca7/XmlReader.java/clean/libjava/gnu/xml/aelfred2/XmlReader.java | [
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String result = null; | public String submitReportToRepository() throws BugzillaException, LoginException, PossibleBugzillaFailureException { BufferedOutputStream out = null; BufferedReader in = null; try { // connect to the bugzilla server URLConnection cntx = BugzillaPlugin.getUrlConnection(postUrl, proxySettings); if (cntx == nul... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/20a0f58b54df2a45c03b2642a8eeca6861335dd1/BugzillaReportSubmitForm.java/clean/org.eclipse.mylyn.bugzilla.core/src/org/eclipse/mylyn/internal/bugzilla/core/BugzillaReportSubmitForm.java | [
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public void setModuleExecution(org.openmicroscopy.omero.model.ModuleExecution moduleExecution) { | public void setModuleExecution(ModuleExecution moduleExecution) { | public void setModuleExecution(org.openmicroscopy.omero.model.ModuleExecution moduleExecution) { this.moduleExecution = moduleExecution; } | 54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9570ef74198a070d72e77c417c9d25244a942de2/CategoryGroup.java/clean/components/common/src/org/openmicroscopy/omero/model/CategoryGroup.java | [
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else { animate.addActionListener(this); frameRate.addChangeListener(new FrameRateListener()); } | animate.addActionListener(this); frameRate.addChangeListener(new FrameRateListener()); | void addPanel() { depth2 = stackSize/(depth*(hasTrans ? 2 : 1)); if (!hasTP && numFiles > 1) { if (hasZ) { sliceSel1 = new JScrollBar(JScrollBar.HORIZONTAL, 1, 1, 1, depth+1); sliceSel2 = new JScrollBar(JScrollBar.HORIZONTAL, 1, 1, 1, depth2+1); } else { sli... | 46826 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46826/b5ef98852ba8417cbe1025293f096a0307c0ea24/LociDataBrowser.java/clean/loci/browser/LociDataBrowser.java | [
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updateBuildActions(ResourcesPlugin.getWorkspace().isAutoBuilding()); | updateBuildActions(); | public void makeAndPopulateActions(IWorkbenchConfigurer windowConfigurer, IActionBarConfigurer actionBarConfigurer) { makeActions(windowConfigurer, actionBarConfigurer); populateMenuBar(actionBarConfigurer); populateCoolBar(actionBarConfigurer); updateBuildActions(ResourcesPlu... | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/cf6dbe88c16d566306439f0a3a20accff5b1cafb/WorkbenchActionBuilder.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/internal/ide/WorkbenchActionBuilder.java | [
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if (fBufferOffset + fBufferLength == fDocument.getLength()) | int end= fBufferOffset + fBufferLength; if (end == fDocument.getLength() || end == fRangeOffset + fRangeLength) | public final int read() { if (fOffset == fBufferLength) { if (fBufferOffset + fBufferLength == fDocument.getLength()) return EOF; else { updateBuffer(fBufferOffset + fBufferLength); fOffset= 0; } } return fBuffer[fOffset++]; } | 9698 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9698/b99f8f7b29a481f6e67088449d65461b15cb87bb/BufferedDocumentScanner.java/clean/org.eclipse.jdt.ui/ui/org/eclipse/jdt/internal/ui/text/BufferedDocumentScanner.java | [
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private UserQuery storeOrUpdateQueryWithoutTransaction(String name, QueryHelper queryHelper, boolean isPrivate, boolean overwriteQuery, IWUserContext iwuc) throws IDOStoreException, IOException, CreateException, SQLException, FinderException { Group group = getCorrespondingGroup(iwuc); // get user query, get xml ... | 57644 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57644/726d5e6858cf8bab2f102dac52b49bdeffe58d8b/QueryServiceBean.java/clean/src/java/com/idega/block/dataquery/business/QueryServiceBean.java | [
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sJdbcPassword = jdbcProps.getProperty("jdbcPassword"); | jdbcDriverProps.put("user", sJdbcUser); jdbcDriverProps.put("password", jdbcProps.getProperty("jdbcPassword")); jdbcDriver = (java.sql.Driver)Class.forName(sJdbcDriver).newInstance(); | protected static void loadProps () throws Exception { if (!bPropsLoaded) { InputStream inStream = RDBMServices.class.getResourceAsStream("/properties/rdbm.properties"); Properties jdbcProps = new Properties(); jdbcProps.load(inStream); sJdbcDriver = jdbcProps.getProperty("jdbcDriver")... | 24959 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/24959/ad4a5592d326824a0ba31757ac3e4a3936db617f/RDBMServices.java/clean/source/org/jasig/portal/RDBMServices.java | [
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Evaluator push(); | Evaluator push(Member[] members); | Evaluator push(); | 4891 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4891/04e646f31dd5b7942980cee630c94f49bdab0e26/Evaluator.java/buggy/src/main/mondrian/olap/Evaluator.java | [
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this.labelTitle.setText(Messages.getString("ConfirmationPanel.Title")); | this.labelTitle.setText(DeepaMehtaMessages.getString("SetupWizard.ConfirmationPanel.Title")); | private JPanel getPanelTitle() { if (this.panelTitle == null) { this.labelTitle = new JLabel(); this.panelTitle = new JPanel(); this.labelTitle.setText(Messages.getString("ConfirmationPanel.Title")); //$NON-NLS-1$ this.labelTitle.setFont(new java.awt.Font("Dialog", java.awt.Font.BOLD, 18)); this.panelTitle.... | 13653 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13653/71da0c3787b04338fa24ead224d064913638ddab/ConfirmationPanel.java/clean/trunk/develop/src/de/deepamehta/launchpad/setup/wizard/ConfirmationPanel.java | [
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shutdown(); throw iex; | if (iex.getMessage().startsWith("No space left on device")) { throw new DiskOutOfSpaceException("No space left on device"); } else { shutdown(); throw iex; } | private void writeBlock(DataInputStream in) throws IOException { // // Read in the header // DataOutputStream reply = new DataOutputStream(new BufferedOutputStream(s.getOutputStream())); try { boolean shouldReportBlock = in.readBoolean(); ... | 53958 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53958/67354d9a280bcc27ce256ba07c03704fc231475c/DataNode.java/buggy/src/java/org/apache/hadoop/dfs/DataNode.java | [
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println(" DECLARE @reftable nvarchar(60), @constraintname nvarchar(60)"); println(" DECLARE refcursor CURSOR FOR"); println(" select reftables.name tablename, cons.name constraintname"); println(" from sysobjects tables,"); println(" sysobjects reftables,"); println(" sysobjects con... | println(" DECLARE @tablename nvarchar(60), @constraintname nvarchar(60)"); println(" DECLARE refcursor CURSOR FOR"); println(" SELECT object_name(objs.parent_obj) tablename, objs.name constraintname"); println(" FROM sysobjects objs JOIN sysconstraints cons ON objs.id = cons.constid"); print(" WHERE objs.xtype... | public void dropTable(Table table) throws IOException { String tableName = getTableName(table); writeQuotationOnStatement(); print("IF EXISTS (SELECT 1 FROM sysobjects WHERE type = 'U' AND name = "); printAlwaysSingleQuotedIdentifier(tableName); println(")"); println("BE... | 3517 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3517/a487371df6ee484b45085187e4180a8b8e845725/MSSqlBuilder.java/clean/src/java/org/apache/ddlutils/platform/mssql/MSSqlBuilder.java | [
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public String getContent() { try { InputStream in = getInputStream(); byte[] byteBuffer = new byte[in.available()]; in.read(byteBuffer); in.close(); return new String(byteBuffer); } catch (Exception ignore) { return ""; | public String getContent(String encoding) throws IOException { InputStream in = getInputStream(); int size = (int) file.length(); byte[] buf = new byte[size]; int read = 0; while (read < size) { int r = in.read(buf, read, size - read); if (r == -1) break; read += r; | public String getContent() { try { InputStream in = getInputStream(); byte[] byteBuffer = new byte[in.available()]; in.read(byteBuffer); in.close(); return new String(byteBuffer); } catch (Exception ignore) { return ""; } } | 46029 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46029/1336e51ba065f1f5d4d790656b30ec798ec3ce31/FileResource.java/clean/src/helma/framework/repository/FileResource.java | [
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break; case STARTCDATA: | } else if (STARTCDATA.equals(type)) { | public void outputBuffer() throws SAXException { // for speed purposes, we don't allow contentHandler to be null if(contentHandler!=null) { Enumeration args = eventArguments.elements (); ThreeString ths; CharBlock cd; TwoString ts; FourString fs; ... | 24959 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/24959/5bd8136256b7a06c2a8f66363fbe38b5e9e9f206/SAX2BufferImpl.java/buggy/source/org/jasig/portal/utils/SAX2BufferImpl.java | [
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if (b1 == 0x3C && b1 == 0x00 && b2 == 0x3F && b3 == 0x00) { | if (b0 == 0x3C && b1 == 0x00 && b2 == 0x3F && b3 == 0x00) { | protected String getEncodingName(byte[] b4, int count) { if (count < 2) { return "UTF-8"; } // UTF-16, with BOM int b0 = b4[0] & 0xFF; int b1 = b4[1] & 0xFF; if (b0 == 0xFE && b1 == 0xFF) { // UTF-16, big-endian return "UTF-16"; } ... | 1831 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1831/790f245881c057a7863cee8a66a5056617ca8297/XMLEntityManager.java/buggy/src/org/apache/xerces/impl/XMLEntityManager.java | [
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Text categoryText = new Text(categoryString); categoryText.setFontStyle(_categoryStyle); | private void getCollectionView(BoxEntity box, BoxCategory[] categories, Table boxTable, IWContext iwc) { int row = 1; Image image = Table.getTransparentCell(iwc); image.setHeight(_boxSpacing); for (int a = 0; a < categories.length; a++) { String categoryString = BoxBusiness.getLocalizedString(categories[a], _iLo... | 13829 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13829/eb0f84346a12ce3c7d0c6bfef55efe1ccb70e2f1/Box.java/buggy/src/java/com/idega/block/boxoffice/presentation/Box.java | [
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AST tmp969_AST_in = (AST)_t; | AST tmp968_AST_in = (AST)_t; | public final void definequerystate(AST _t) throws RecognitionException { AST definequerystate_AST_in = (_t == ASTNULL) ? null : (AST)_t; AST __t1189 = _t; AST tmp965_AST_in = (AST)_t; match(_t,DEFINE); _t = _t.getFirstChild(); { if (_t==null) _t=ASTNULL; switch ( _t.getType()) { case NEW: case SHARED: {... | 13952 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13952/daa15e07422d3491bbbb4d0060450c81983332a4/TreeParser03.java/clean/trunk/org.prorefactor.core/src/org/prorefactor/treeparser03/TreeParser03.java | [
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cabFile.lastModified()) | cabFile.lastModified()) { | protected boolean isUpToDate(Vector files) { boolean upToDate = true; for (int i=0; i<files.size() && upToDate; i++) { String file = files.elementAt(i).toString(); if (new File(baseDir,file).lastModified() > cabFile.lastModified()) upToDat... | 639 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/639/7a4e9ca2278d5e22a3492abb964312150d0286b9/Cab.java/clean/src/main/org/apache/tools/ant/taskdefs/optional/Cab.java | [
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final AsmCodeGenerator codeGenerator = new AsmCodeGenerator(rootContainer, loader); | final AsmCodeGenerator codeGenerator = new AsmCodeGenerator(rootContainer, loader, new PsiNestedFormLoader(module)); | public FileProcessingCompiler.ProcessingItem[] process(final CompileContext context, final FileProcessingCompiler.ProcessingItem[] items) { final ArrayList<FileProcessingCompiler.ProcessingItem> compiledItems = new ArrayList<FileProcessingCompiler.ProcessingI... | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/0a8c7f6f897798de90c99991927c43760777d651/Form2ByteCodeCompiler.java/clean/ui-designer/impl/com/intellij/uiDesigner/make/Form2ByteCodeCompiler.java | [
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if(ReportPlugin.getDefault( ).getEnableCommentPreference( )){ fileName = file.getLocation( ).toOSString( ); InputStream is = new FileInputStream(fileName); ModuleHandle model = SessionHandleAdapter.getInstance( ).init( fileName,is ); model.setStringProperty( ModuleHandle.COMMENTS_PROP, ReportPlugin.getDefault( ).getCom... | private void doFinish( IPath containerName, String fileName, InputStream stream, String cheatSheetId, boolean showCheatSheet, IProgressMonitor monitor ) throws CoreException { // create a sample file monitor.beginTask( CREATING + fileName, 2 ); IResource resource = (IContainer) ResourcesPlugin.getWorkspace( ) ... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/546229f93352dd11d3a374ba60974b1f75027225/NewReportWizard.java/buggy/UI/org.eclipse.birt.report.designer.ui.ide/src/org/eclipse/birt/report/designer/ui/ide/wizards/NewReportWizard.java | [
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return 110; } | return 110; } | public int getVersionOfFirstRelease(){ return 110; } | 56479 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56479/ae5daeb6a447edf40a1be7e63cdb678c4d2bbaa1/NumForNodesWithChar.java/clean/Source/mesquite/trees/NumForNodesWithChar/NumForNodesWithChar.java | [
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System.out.println(indent+"Field "+field+" Parent nodes: "+inEdges); | System.out.println(indent+"Field "+field.getName().toString()+" Parent nodes: "+inEdges); | static void printAllInclusionEdges(HashSet visited, MethodSummary.Node pnode, MethodSummary.Node node, String indent, boolean all, jq_Field f, boolean verbose) throws IOException { if (verbose) System.out.print(indent+"Node: "+node); if (pnode != null) { Quad q = (Quad)apa.edgesToQuads.get(... | 3029 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3029/b56367ecb88c2c6de9aaea3bde8aeed3587edcaf/PointerExplorer.java/clean/joeq_core/joeq/Compiler/Quad/PointerExplorer.java | [
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String oid = request.getParameter("oid"); Integer idInternal = Integer.valueOf(oid); | String oid = request.getParameter("oid"); Integer idInternal = Integer.valueOf(oid); | public ActionForward deleteIncompatibility(ActionMapping mapping, ActionForm form, HttpServletRequest request, HttpServletResponse response) throws Exception { String oid = request.getParameter("oid"); Integer idInternal = Integer.valueOf(oid); Vigilant vigilant = (Vigilant) RootDoma... | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/bf038d353ac7538e5827d426ae8c0c090973ac6b/VigilantGroupManagement.java/clean/src/net/sourceforge/fenixedu/presentationTier/Action/vigilancy/VigilantGroupManagement.java | [
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return TypeUtil.getDeclaringType(res); | return TypeUtil.getDeclaringClass(res); | private ICElement getDefiningType(ITypeHierarchy hierarchy, IMethodDeclaration method) throws CModelException { ICElement declaringType= TypeUtil.getDeclaringType(method); if ((method.getVisibility() == ASTAccessVisibility.PRIVATE) || method.isStatic() || method.isConstructor() || method.isDestructor()) { retur... | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/cd51bbd5f74702b10da18821cacea42e20722fe5/HierarchyViewerSorter.java/clean/core/org.eclipse.cdt.ui/browser/org/eclipse/cdt/internal/ui/browser/typehierarchy/HierarchyViewerSorter.java | [
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void setStyle (HSSFCellStyle style) { | void setStyle(HSSFCellStyle style) { | void setStyle (HSSFCellStyle style) { if (style != null) { _cell.setCellStyle(style); } } | 46428 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46428/32307c8ad72f13555999cfde179d9a18f0487694/Cell.java/clean/src/blocks/poi/java/org/apache/cocoon/components/elementprocessor/impl/poi/hssf/elements/Cell.java | [
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return startTime.before(endTime) ? ((timeOnly.after(startTime) || timeOnly.equals(startTime)) && (timeOnly .before(endTime) || timeOnly.equals(endTime))) : ((timeOnly.after(startTime) || timeOnly .equals(startTime)) || (timeOnly.before(endTime) || timeOnly.equals(endTime))); | return startTime.before(endTime) ? ((timeOnly.after(startTime) || timeOnly.equals(startTime)) && (timeOnly .before(endTime) || timeOnly.equals(endTime))) : ((timeOnly.after(startTime) || timeOnly.equals(startTime)) || (timeOnly .before(endTime) || timeOnly.equals(endTime))); | private boolean isDailySessionTime(Calendar timestamp) { Calendar timeOnly = getTimeOnly(timestamp, calendar1); return startTime.before(endTime) ? ((timeOnly.after(startTime) || timeOnly.equals(startTime)) && (timeOnly .before(endTime) || timeOnly.equals(endTime))) : ((timeOnly.after(st... | 6791 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6791/1767d639ccd72514f6c22f90185d2090cac4fcd4/SessionSchedule.java/clean/src/quickfix/SessionSchedule.java | [
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MarkerType type = MarkerTypesModel.getInstance().getType(rootTypes[i]); | MarkerType type = MarkerTypesModel.getInstance().getType( rootTypes[i]); | MarkerFilter(String filterName, String[] rootTypes) { name = filterName; for (int i = 0; i < rootTypes.length; i++) { MarkerType type = MarkerTypesModel.getInstance().getType(rootTypes[i]); if (!this.rootTypes.contains(type)) { this.rootTypes.add(type); } } resetState(); } | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/0645148767f084e4b686984a56e3496706cce525/MarkerFilter.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/views/markers/internal/MarkerFilter.java | [
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public void delProfilePermissions(long id_profile) throws KettleDatabaseException | public synchronized void delProfilePermissions(long id_profile) throws KettleDatabaseException | public void delProfilePermissions(long id_profile) throws KettleDatabaseException { String sql = "DELETE FROM R_PROFILE_PERMISSION WHERE ID_PROFILE = " + id_profile; database.execStatement(sql); } | 9547 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9547/9a23bf7234591fe690816bbf6320414c2ad3eaae/Repository.java/clean/src/be/ibridge/kettle/repository/Repository.java | [
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elfac = IsotopeFactory.getInstance(); | elfac = IsotopeFactory.getInstance(atomContainer.getBuilder()); | public DescriptorValue calculate(AtomContainer atomContainer) throws CDKException { int valence = 0; int atomicNumber = 0; int hcount = 0; int atomValue = 0; double val0 = 0; double val1 = 0; ArrayList chiAtom = new ArrayList(2); double chi1v = 0; double chi1vC = 0; Atom[] atoms = null; Atom[] neighatoms = ... | 1306 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1306/99fe3519d35ad1fd276844ab16fa237c545a01fc/ValenceCarbonConnectivityOrderOneDescriptor.java/clean/src/org/openscience/cdk/qsar/ValenceCarbonConnectivityOrderOneDescriptor.java | [
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if (aString.endsWith(")") && (Globals.getAbilityKeyed(Constants.FEAT_CATEGORY, aString) == null)) { final String featKey = aString.substring(0, aString.indexOf('(') - 1); final Ability anAbility = Globals.getAbilityKeyed(Constants.FEAT_CATEGORY, featKey); if (anAbility != null) { | if (aString.endsWith(")") && (Globals.getAbilityKeyed(Constants.FEAT_CATEGORY, aString) == null)) { final String featKey = aString.substring(0, aString .indexOf('(') - 1); final Ability anAbility = Globals.getAbilityKeyed( Constants.FEAT_CATEGORY, featKey); if (anAbility != null) { | public void setRace(final Race aRace) { final Race oldRace = getRace(); final boolean raceIsNull = (oldRace == null); // needed because race is set to null later final boolean firstLevel = getTotalClassLevels()==1; // remove current race attributes if (!raceIsNull) { oldRace.getSpellSupport().clearCharacterSpe... | 48301 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48301/376816acf8bf134fa77bd6ea5c602dbe9af9bfbd/PlayerCharacter.java/clean/code/src/java/pcgen/core/PlayerCharacter.java | [
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if (!needInterface(ifaceSym)) { | if (!needInterface(ifaceSym)) | protected Symbol getClassSym(Symbol ifaceSym) { assert !hasClassSuffix(ifaceSym.name) : ifaceSym.name; if (!needInterface(ifaceSym)) { return ifaceSym; } else { if (!ifaceToClass.containsKey(ifaceSym)) { Symbol classSym; Name ifaceName = iface... | 9617 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9617/9523dad59863f61037acc6bf89359b9f3ad95489/AddInterfaces.java/buggy/sources/scalac/transformer/AddInterfaces.java | [
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logger.debug(reflectedClass.getName(), " #fields: " + fields.length); | private DefaultMutableTreeNode getTree(ChemObject object) { DefaultMutableTreeNode node = new ChemObjectTreeNode(object); Class reflectedClass = object.getClass(); // get all fields in this ChemObject Field[] fields = getFields(reflectedClass); // logger.debug(reflectedClass.getNa... | 45254 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45254/a087356949ddf5adf7b02ebd8111b72c53eab132/ChemObjectTree.java/buggy/src/org/openscience/cdk/applications/swing/ChemObjectTree.java | [
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outputMap.put(pt.getScuflPort().getName().toLowerCase(),pt); | outputMap.put(pt.getScuflPort().getName().toLowerCase(),pt); } | public uk.ac.soton.itinnovation.mygrid.workflow.enactor.core.eventservice.TaskStateMessage doTask() { try{ TalismanProcessor theProcessor = (TalismanProcessor)proc; // Get a map of the inputs, for each entry in the map the key is the // name of the port that the input came in on, the value is the value ... | 7616 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7616/5f66d59db512d117e74cdf377b296e482887701a/TalismanTask.java/buggy/trunk/taverna1.0/src/uk/ac/soton/itinnovation/taverna/enactor/entities/TalismanTask.java | [
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BrowserControlFactory.setAppData(args[0]); | BrowserControlFactory.setAppData("nonnative", args[0]); | public static void main(String [] args){ System.out.println("doing asserts"); Assert.setEnabled(true); Log.setApplicationName("BrowserControlFactory"); Log.setApplicationVersion("0.0"); Log.setApplicationVersionDate("$Id: BrowserControlFactory.java,v 1.4 2001/05/29 18:34:19 ashuk%eng.sun.com Exp $"); ... | 11366 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11366/66014df74dc65067759144c17bf072521de6a32c/BrowserControlFactory.java/clean/java/webclient/classes_spec/org/mozilla/webclient/BrowserControlFactory.java | [
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progressListener = l; | progressListener = l; | public void setProgressListener(ProgressListener l) { progressListener = l; } | 5268 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5268/e52ac744cd6cb7bf0ce3a82e6530680ed5180cbc/AWTRenderer.java/clean/src/org/apache/fop/render/awt/AWTRenderer.java | [
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public void close() throws IOException { out = 0; in = 0; closed = true; synchronized(this) { finished = true; this.notifyAll(); } } | public synchronized void close() throws IOException { closed = true; notifyAll(); } | public void close() throws IOException { out = 0; in = 0; closed = true; synchronized(this) { finished = true; this.notifyAll(); }} | 45713 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45713/af503bb72418d994f4439910bc3989d556fcdbd5/PipedInputStream.java/buggy/libraries/javalib/java/io/PipedInputStream.java | [
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int changeRow = Integer.parseInt(rst.nextToken()); String thisRow = (String) rows.get(changeRow-1); consoleWriteLn("** Skriv om rad " + changeRow + ":"); consoleWriteLn(changeRow + ": " + thisRow); rows.set(changeRow-1, crtReadLine(changeRow + ": ")); consoleWriteLn(""); | if (rst.hasMoreTokens()) { int changeRow = Integer.parseInt(rst.nextToken()); String thisRow = (String) rows.get(changeRow-1); consoleWriteLn("** Skriv om rad " + changeRow + ":"); consoleWriteLn(changeRow + ": " + thisRow); rows.set(changeRow-1, crtReadLine(changeRow + ": ")); consoleWriteLn(""); } else { consoleWrite... | Text editText(Text t) throws IOException { String subject = bytesToString(t.getSubject()); int[] rcpts = t.getRecipients(); for (int i=0; i < rcpts.length; i++) { consoleWriteLn("Mottagare: " + confNoToName(rcpts[i])); } int[] ccRcpts = t.getCcRecipients(); for (int i=0; i < ccRcpts.length; i++) { consol... | 3721 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3721/6b691be982e35d50cab64e35b14bd50b89edf526/Test2.java/buggy/nu/dll/app/test/Test2.java | [
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LOG.debug("Entering nullPropertyValue [target="+target+", property="+property+"]"); | LOG.debug("Entering nullPropertyValue [context="+context+", target="+target+", property="+property+"]"); | public Object nullPropertyValue(Map context, Object target, Object property) { LOG.debug("Entering nullPropertyValue [target="+target+", property="+property+"]"); boolean c = OgnlContextState.isCreatingNullObjects(context); if (!c) { return null; } if ((target == null) || (pr... | 16468 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/16468/155d35a22b3a788136bd5f5fb6eb91a4a0d0d7e9/InstantiatingNullHandler.java/clean/src/java/com/opensymphony/xwork/util/InstantiatingNullHandler.java | [
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addPropValue( content, repeat ); addPropValue( content, attach ); addPropValue( content, x ); addPropValue( content, y ); content.append( ';' ); | private static void buildBackground( StringBuffer content, IStyle style, HTMLReportEmitter emitter ) { buildProperty( content, HTMLTags.ATTR_COLOR, style.getColor( ) ); //$NON-NLS-1$ String color = style.getBackgroundColor( ); String image = style.getBackgroundImage( ); String repeat = style.getBackgroundRepeat(... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/26e720886eb20318d2dd7875ea22a8e430dd3bf6/AttributeBuilder.java/clean/engine/org.eclipse.birt.report.engine.emitter.html/src/org/eclipse/birt/report/engine/emitter/html/AttributeBuilder.java | [
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return fAugmentations.get(key); | return fAugmentationsContainer.getItem(key); | public Object getItem(String key){ return fAugmentations.get(key); } | 1831 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1831/319986a3e4c201ba350fabc02f1de2891c2708b6/AugmentationsImpl.java/buggy/src/org/apache/xerces/util/AugmentationsImpl.java | [
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field.setInitString(init.toString()); jClass.addField(field); | field.setInitString(init.toString()); jClass.addField(field); | void processEnumerationAsNewObject(final SimpleType simpleType, final FactoryState state) { Enumeration enumeration = simpleType.getFacets("enumeration"); //-- select naming for types and instances boolean useValuesAsName = true; useValuesAsName = selectNamingScheme(enumeration, useValue... | 3614 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3614/2f6ea37c53da29c8f134289d7765734040129cc3/EnumerationFactory.java/buggy/castor/trunk/src/main/java/org/exolab/castor/builder/EnumerationFactory.java | [
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command.setCommandId(getNextCommandId()); | if (command.getCommandId() == 0) { command.setCommandId(getNextCommandId()); } | public FutureResponse asyncRequest(Command command) throws IOException { command.setCommandId(getNextCommandId()); command.setResponseRequired(true); FutureResponse future = new FutureResponse(); requestMap.put(new Integer(command.getCommandId()), future); next.oneway(command); ... | 17032 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17032/72b382d0bd120ea500b56c53a9ed7a6b0fb07331/ResponseCorrelator.java/clean/activemq-core/src/main/java/org/apache/activemq/transport/ResponseCorrelator.java | [
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super(position); | super(position, NodeTypes.DEFSNODE); | public DefsNode(ISourcePosition position, Node receiverNode, String name, Node argsNode, ScopeNode bodyNode) { super(position); this.receiverNode = receiverNode; this.name = name.intern(); this.argsNode = argsNode; this.bodyNode = bodyNode; } | 47619 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47619/6e15491217631472c05c6928672f9c7064a978b3/DefsNode.java/buggy/src/org/jruby/ast/DefsNode.java | [
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CompilationUnitDeclaration compilationUnitDeclaration =CodeSnippetParsingUtil.parseCompilationUnit(source.toCharArray(), this.options); | CompilationUnitDeclaration compilationUnitDeclaration = this.codeSnippetParsingUtil.parseCompilationUnit(source.toCharArray(), this.options, true); | private TextEdit formatCompilationUnit(String source, int indentationLevel, String lineSeparator, int offset, int length) { CompilationUnitDeclaration compilationUnitDeclaration =CodeSnippetParsingUtil.parseCompilationUnit(source.toCharArray(), this.options); if (lineSeparator != null) { this.preferences.line_se... | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/55eb63b50ad4a934502bfb435a017ff21ebaf8d8/DefaultCodeFormatter.java/buggy/org.eclipse.jdt.core/formatter/org/eclipse/jdt/internal/formatter/DefaultCodeFormatter.java | [
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return getField(column).getTypeName(); | return getField(column).getPGType(); | public String getColumnTypeName(int column) throws SQLException { return getField(column).getTypeName(); } | 46563 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46563/76a6da8a1b01e23091da65f5e167d67f5274d740/ResultSetMetaData.java/clean/src/interfaces/jdbc/org/postgresql/jdbc2/ResultSetMetaData.java | [
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Collection propertyNames = registry.getRegisteredProperties(); | Collection<String> propertyNames = registry.getRegisteredProperties(); | private void dumpComponentAsGDL(PrintStream out, String name) { out.println("node: {title: \"" + name + "\" color: " + getColor(name) + "}"); Symbol symbol = symbolTable.get(name); Registry registry = symbol.getRegistry(); Collection propertyNames = registry.getRegisteredP... | 8350 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8350/b7df0fb908231f812bb7c5876ed27d105ced7c2b/ConfigurationManager.java/buggy/src/sphinx4/edu/cmu/sphinx/util/props/ConfigurationManager.java | [
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if (jj_scan_token(EXTENDS)) return true; if (jj_3R_172()) return true; Token xsp; while (true) { xsp = jj_scanpos; if (jj_3R_316()) { jj_scanpos = xsp; break; } } | if (jj_3R_195()) return true; | final private boolean jj_3R_157() { if (jj_scan_token(EXTENDS)) return true; if (jj_3R_172()) return true; Token xsp; while (true) { xsp = jj_scanpos; if (jj_3R_316()) { jj_scanpos = xsp; break; } } return false; } | 41673 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/41673/a180e9b19197c7613f1e73c6ec8a574a17011e5e/JavaParser.java/clean/pmd/src/net/sourceforge/pmd/ast/JavaParser.java | [
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desc.setDemux(myDispatcher); | desc.setContainer(this); | private void initDF() { System.out.print("Starting Default DF... "); defaultDF = new df(); // Subscribe as a listener for the AMS agent defaultDF.addCommListener(this); // Insert DF into local agents table localAgents.put("df", defaultDF); AgentDescriptor desc = new AgentDescriptor(); desc.set... | 5505 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5505/b3c47bde84f6882585b3d94c8b02ad8aec7de8cb/AgentPlatformImpl.java/clean/src/jade/core/AgentPlatformImpl.java | [
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if (score > bestScore) { bestTree = tree; bestScore = score; } } if (counter > 0 && counter % stepSize == 0) { System.out.print("*"); System.out.flush(); } counter ++; } } catch (Importer.ImportException e) { System.err.println("Error Parsing Input Tree: " + e.getMessage()); return null; } System.out.println(); System.... | if (score > bestScore) { bestTree = tree; bestScore = score; } } if (counter > 0 && counter % stepSize == 0) { System.out.print("*"); System.out.flush(); } counter ++; } } catch (Importer.ImportException e) { System.err.println("Error Parsing Input Tree: " + e.getMessage()); return null; } System.out.println(); System.... | private Tree summarizeTrees(int burnin, CladeSystem cladeSystem, String inputFileName) throws IOException { Tree bestTree = null; double bestScore = 0.0; System.out.println("Analyzing " + totalTreesUsed + " trees..."); System.out.println("0 25 50 75 ... | 49053 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49053/77b1ece5c4a9000c1b01251fdcf1239b7c2eb443/TreeAnnotator.java/buggy/trunk/src/dr/app/tools/TreeAnnotator.java | [
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public void ruleAction(int ruleNumber) { switch (ruleNumber) { // // Rule 1: TypeName ::= TypeName . ErrorId // case 1: { //#line 6 "C:/Docume~1/Administrator/MyDocu~1/work/x10/cvs/x10.compiler/src/x10/parser/MissingId.gi" ... | 1832 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1832/f8e1720cd66996a6339b992bf154aa0d019240a3/X10Parser.java/clean/x10.compiler/src/x10/parser/X10Parser.java | [
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throw new MojoExecutionException( Messages.getString( "EclipsePlugin.notadir", outputDir ) ); | throw new MojoExecutionException( Messages.getString( "EclipsePlugin.notadir", outputDir ) ); | public void execute() throws MojoExecutionException { if ( executedProject == null ) { // backwards compat with alpha-2 only executedProject = project; } assertNotEmpty( executedProject.getGroupId(), "groupId" ); //$NON-NLS-1$ assertNotEmpty( e... | 1315 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1315/e3899c9cbcad8544a3c599e5c393373e7ee8694f/EclipsePlugin.java/buggy/maven-plugins/maven-eclipse-plugin/src/main/java/org/apache/maven/plugin/eclipse/EclipsePlugin.java | [
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super(why); | super(); | public FifoQueueClosedException(String why) { super(why); } | 25465 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/25465/b3612967cb053036bdb295ee74cb2e369c6ca18d/FifoQueueClosedException.java/buggy/src/core/org/opennms/core/queue/FifoQueueClosedException.java | [
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IMylarStructureBridge bridge = MylarPlugin.getDefault().getStructureBridge(element.getContentType()); | IMylarStructureBridge bridge = ContextCorePlugin.getDefault().getStructureBridge(element.getContentType()); | public void interestChanged(List<IMylarElement> elements) { for (IMylarElement element : elements) { IMylarStructureBridge bridge = MylarPlugin.getDefault().getStructureBridge(element.getContentType()); try { if (bridge.isDocument(element.getHandleIdentifier())) { IResource resource = MylarIdePlugin.getDef... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/b23efbfef800ff6f85224f036d6a11e9fab7acba/MylarChangeSetManager.java/clean/org.eclipse.mylyn.ide.ui/src/org/eclipse/mylyn/internal/ide/team/MylarChangeSetManager.java | [
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