rem stringlengths 1 53.3k | add stringlengths 0 80.5k | context stringlengths 6 326k | meta stringlengths 141 403 | input_ids list | attention_mask list | labels list |
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_started = _context.clock().now(); | _started = getContext().clock().now(); | public Failure(TunnelInfo tunnel, Hash replyThrough) { super(RequestTunnelJob.this._context); _tunnel = tunnel; _replyThrough = replyThrough; _started = _context.clock().now(); } | 45677 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45677/e737e5c9507ed0d463dc9e45a8f63657f466b177/RequestTunnelJob.java/clean/router/java/src/net/i2p/router/tunnelmanager/RequestTunnelJob.java | [
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public void fillArc(int x, int y, int width, int height, int startAngle, int endAngle) { | public void fillArc(int x, int y, int width, int height, int startAngle, int arcAngle) { | public void fillArc(int x, int y, int width, int height, int startAngle, int endAngle) { if (handle == 0) SWT.error(SWT.ERROR_GRAPHIC_DISPOSED); if (data.updateClip) setCGClipping(); if (width < 0) { x = x + width; width = -width; } if (height < 0) { y = y + height; height = -height; } if (width == 0 || height == 0... | 12413 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12413/63d6f189c5fce0a63def15c1edf14e84d34f6f55/GC.java/clean/bundles/org.eclipse.swt/Eclipse SWT/carbon/org/eclipse/swt/graphics/GC.java | [
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focusGainedHandler(evt); } | focusGainedHandler(evt); } | public void focusGained(java.awt.event.FocusEvent evt) { focusGainedHandler(evt); } | 7352 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7352/32df36439994c14fbd4bb097f19c24c015ecf59d/FindBugsFrame.java/clean/findbugs/src/java/edu/umd/cs/findbugs/gui/FindBugsFrame.java | [
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out.println("</tr>"); NumberFormat formatter=new DecimalFormat("#,##0.0"); int qty_tests=0; int qty_pass_m=0; int qty_pass_s=0; int qty_skip=0; int qty_fail=0; long time_start=Long.MAX_VALUE; long time_end=Long.MIN_VALUE; for(ISuite suite : suites) { if(suites.size()>1) { titleRow( suite.getName(), 7); | m_out.println("</tr>"); NumberFormat formatter = new DecimalFormat("#,##0.0"); int qty_tests = 0; int qty_pass_m = 0; int qty_pass_s = 0; int qty_skip = 0; int qty_fail = 0; long time_start = Long.MAX_VALUE; long time_end = Long.MIN_VALUE; for (ISuite suite : suites) { if (suites.size() > 1) { titleRow(suite.getName(),... | private void summarize(List<ISuite> suites) { tableStart("param"); out.print("<tr><th>Test</th>"); tableColumnStart("Methods<br/>Passed"); tableColumnStart("Scenarios<br/>Passed"); tableColumnStart("# skipped"); tableColumnStart("# failed"); tableColumnStart("Total<br/>Time"); tableColumnStar... | 48015 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48015/cebdf50099bfd930b28e224ace6eab7b69b8cf31/EmailableReporter.java/buggy/src/main/org/testng/reporters/EmailableReporter.java | [
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referenceName); | referenceName); | public void applyFix(Project project, ProblemDescriptor descriptor){ final PsiJavaCodeReferenceElement referenceElement = (PsiJavaCodeReferenceElement) descriptor.getPsiElement(); final String referencedClassName = referenceElement.getText(); final PsiClass if... | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/2d46d291193579a7564649b4881c7ea8e02eda5b/StaticInheritanceInspection.java/clean/plugins/InspectionGadgets/src/com/siyeh/ig/classlayout/StaticInheritanceInspection.java | [
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private static int DaysInYear(int y) { | private static int DaysInYear(int y) { | private static int DaysInYear(int y) { if (y % 4 == 0 && (y % 100 != 0 || y % 400 == 0)) return 366; else return 365; } | 19042 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19042/02ecf7529127113a2cb5d3237d62ee474eb599d0/NativeDate.java/clean/src/org/mozilla/javascript/NativeDate.java | [
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if (debuggerConnected()) return; | if (isDebuggerConnected()) return; | public void spawnDebugger(String agentName) { if (!m_Debuggers) return; if (debuggerConnected()) return; // Figure out whether to use java or javaw String os = System.getProperty("os.name"); String commandLine; if (os.matches(".+indows.*") || os.matches("INDOWS")) { commandLine = "javaw -jar \"" + m_BasePath... | 47007 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47007/a81c1f10febefee92a3ca5345302ac329f8d07d4/Simulation.java/clean/SoarSuite/Environments/JavaBaseEnvironment/source/simulation/Simulation.java | [
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IStyle s = ((AbstractContent)elt).getStyle(); Value sv = (Value)s.getProperty(index); Value cv = engine.resolveStyle(elt, index, sv, pcs); | IStyle s = ( (AbstractContent) elt ).getStyle( ); Value sv = (Value) s.getProperty( index ); Value cv = engine.resolveStyle( elt, index, sv, pcs ); | public CSSValue getProperty(int index) { if (values == null) { values = new CSSValue[NUMBER_OF_STYLE]; caculated = new boolean[NUMBER_OF_STYLE]; } if (caculated[index]) { return values[index]; } IContent parent = (IContent)elt.getParent(); IStyle pcs = null; if (parent != null) { pcs = parent.getC... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/6373b5f23895ceff467362db03b2683f590a5649/ComputedStyle.java/clean/engine/org.eclipse.birt.report.engine/src/org/eclipse/birt/report/engine/css/dom/ComputedStyle.java | [
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setOnkeyup((String) evalAttr("onkeyup", getOnkeyup(), | setOnkeyup((String) evalAttr("onkeyup", getOnkeyupExpr(), | private void evaluateExpressions() throws JspException { try { setAccesskey((String) evalAttr("accessKey", getAccesskey(), String.class)); } catch (NullAttributeException ex) { setAccesskey(null); } try { setAlt((... | 8610 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8610/2dbb705eab3659c5c2ceb6398f2eec56e1f6994d/ELTextTag.java/clean/struts-el/src/share/org/apache/strutsel/taglib/html/ELTextTag.java | [
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baseFactory.freeBucket(((PaddedEphemerallyEncryptedBucket)b).getUnderlying()); | baseFactory.freeBucket(b); | public void freeBucket(Bucket b) throws IOException { baseFactory.freeBucket(((PaddedEphemerallyEncryptedBucket)b).getUnderlying()); } | 52909 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52909/09788e91c148b4348293b38993a945853a2aae45/PaddedEphemerallyEncryptedBucketFactory.java/buggy/src/freenet/support/io/PaddedEphemerallyEncryptedBucketFactory.java | [
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db.setAutoCommit(false); | public ImageViewer(Frame f,String url,String user,String password) throws ClassNotFoundException, FileNotFoundException, IOException, SQLException { frame = f; MenuBar mb = new MenuBar(); Menu m; MenuItem i; f.setMenuBar(mb); mb.add(m = new Menu("PostgreSQL")); m.add(i= new MenuItem("Ini... | 46597 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46597/02faee5eaa0ed93364446f5c186fa6904899dca6/ImageViewer.java/clean/src/interfaces/jdbc/example/ImageViewer.java | [
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if ( !ExtensionManager.getInstance( ).getEmitterExtensions( ) .containsKey( format ) ) | if ( !ExtensionManager.getInstance( ).getSupportedFormat() .contains( format ) ) | public void run( ) throws EngineException { // Make a deep copy of the design element and recreate the // IReportRunnable // This should be moved to a common place of RunTask, RunderTask and // InteractiveTask. ReportDesignHandle designHandle = (ReportDesignHandle) runnable .getDesignHandle( ); ReportDesignHa... | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/1d8d582eae226915b0af0dada3168441cc0fb0a2/RunAndRenderTask.java/clean/engine/org.eclipse.birt.report.engine/src/org/eclipse/birt/report/engine/api/impl/RunAndRenderTask.java | [
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setOnmouseup(null); | private void evaluateExpressions() throws JspException { try { setAlt((String) evalAttr("alt", getAlt(), String.class)); } catch (NullAttributeException ex) { setAlt(null); } try { setAltKey((String) evalAttr("altKey", getAltKey(), String.class)); ... | 2722 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2722/db064e19656421b94aaf753550935d95f44bd5f9/ELSelectTag.java/buggy/contrib/struts-el/src/share/org/apache/strutsel/taglib/html/ELSelectTag.java | [
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{ if (!isBinary) return -1; int cvFolds=0; for (int i=0; i<entryList.size(); i++) { Entry e = getEntry(i); if (e.partitionID>cvFolds) { cvFolds=e.partitionID+1; } } double mean = errorsNeg()/numberOfNegativeExamples(); double variance = 0.0; for (int k=0; k<cvFolds; k++) { variance += Math.pow( errorsNeg(k)/numberOfNeg... | { if (!isBinary) return -1; int cvFolds=0; for (int i=0; i<entryList.size(); i++) { Entry e = getEntry(i); if (e.partitionID>cvFolds) { cvFolds=e.partitionID+1; } } double mean = errorsNeg()/numberOfNegativeExamples(); double variance = 0.0; for (int k=0; k<cvFolds; k++) { variance += Math.pow( errorsNeg(k)/numberOfNeg... | public double stDevErrorsNeg() { if (!isBinary) return -1; int cvFolds=0; for (int i=0; i<entryList.size(); i++) { Entry e = getEntry(i); if (e.partitionID>cvFolds) { cvFolds=e.partitionID+1; } } double mean = errorsNeg()/numberOfNegativeExamples(); double variance = 0.0; for (int k=0; k<cvFolds; k++) ... | 51753 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51753/e6f5547ded82a315c0b8bcee96ff61710888c5a2/Evaluation.java/buggy/src/edu/cmu/minorthird/classify/experiments/Evaluation.java | [
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rules[7] = (new MultiLineRule("task#", " ", bugToken)); | rules[7] = (new SingleLineRule("task#", " ", bugToken)); | public RepositoryTextScanner() { IToken bugToken = new Token(new TextAttribute(TaskListColorsAndFonts.COLOR_HYPERLINK)); IRule[] rules = new IRule[15]; rules[0] = (new SingleLineRule("http://", " ", bugToken)); rules[1] = (new SingleLineRule("https://", " ", bugToken)); rules[2] = (new MultiLineRule("bug#",... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/30c931929f4e1d114ba0bb162733f350501d5153/RepositoryViewerConfig.java/clean/org.eclipse.mylyn.tasks.ui/src/org/eclipse/mylyn/internal/tasks/ui/editors/RepositoryViewerConfig.java | [
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super("Exponentially Distributed", tree, ratesParameter, rootRatePrior, episodicModel); | super("Exponentially Distributed", tree, ratesParameter, rootRatePrior, episodicModel); | public EDLikelihood(TreeModel tree, Parameter ratesParameter, int rootRatePrior, boolean episodicModel) { super("Exponentially Distributed", tree, ratesParameter, rootRatePrior, episodicModel); } | 51824 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51824/144b4e1c11d383f1c809956fab05e09ba7838da4/EDLikelihood.java/clean/src/dr/evomodel/clock/EDLikelihood.java | [
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fDefaultQualified = saveDefaultQualified; | fElementDefaultQualified = saveElementDefaultQualified; fAttributeDefaultQualified = saveAttributeDefaultQualified; | private void traverseInclude(Element includeDecl) throws Exception { //TO DO: !!!!! location needs to be resolved first. String location = includeDecl.getAttribute(SchemaSymbols.ATT_SCHEMALOCATION); location = expandSystemId(location, fCurrentSchemaURL); if (fIncludeLocations.contains((O... | 46079 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46079/bb46beeba7f4c3b418f67afb47fca9e30f072115/TraverseSchema.java/clean/src/org/apache/xerces/validators/schema/TraverseSchema.java | [
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j.dv.printDiffRules(); | j.getDifferentationVisitor().printDiffRules(); | private String getCommand() throws IOException { String s; if (br == null) return null; if ( (s = br.readLine()) == null) return null; if( s.equals("rules")) { j.dv.printDiffRules(); System.out.println("Operators:"); Operator.printOperators();// System.out.println("dJEPdx - Enter q to quit, rules to... | 54194 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54194/4f303d30b1e9325b8e6560f423a82b2e3baee2a7/MatrixConsole.java/clean/src/org/lsmp/djepExamples/MatrixConsole.java | [
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int idx = listenerTypeName.lastIndexOf("Listener"); | int idx = listenerTypeName.lastIndexOf("Listener"); | private Class<?> getEventType(Class<?> listenerType) throws ClassNotFoundException { String listenerTypeName = listenerType.getName(); int idx = listenerTypeName.lastIndexOf("Listener"); String eventTypeName = listenerTypeName; if (idx != -1) { eventTypeName = liste... | 54769 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54769/fbebe792ba7d15ca09ee75a1c409e3a37b2da0db/EventSetDescriptor.java/clean/modules/beans/src/main/java/java/beans/EventSetDescriptor.java | [
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displayMessage( | display.message( | private GameState yourTurn() { displayMessage("Your move!\n"); for (;;) { String[] move = BattleBoardUtils.getKeyboardInputTokens( "player x y, or pass "); if ((move.length == 1) && "pass".equals(move[0])) { if (standAloneMode) { displayMessage("TO SERVER: " + "pass" + "\n"); } else { ByteBuff... | 55380 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55380/2452a8779617f0038d3a1d0857d5e3bf14751ef0/BattleBoardPlayer.java/clean/src/com/sun/gi/apps/battleboard/client/BattleBoardPlayer.java | [
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String notifications = "<?xml version=\\\"1.0\\\"?>\\n\" + \n" + " \"<notifications xmlns=\\\"http: " \" <header>\\n\" + \n" + " \" <rev>1.2</rev>\\n\" + \n" + " \" <created>Wednesday, February 6, 2002 10:10:00 AM EST</created>\\n\" + \n" + " \" ... | /* * This is the notification config that Wicktor sent when reporting this bug. * * We need to create and Threshold Exceeded event for loadavg5 to match his * notification name = "SNMP High loadavg5 Threshold Exceeded" correctly parsing the varbind. * * What happens (he sent us a patch for this) is that the code does a... | public void testWicktorBug() throws Exception { //setup the notifications that Wicktor discussed String notifications = "<?xml version=\\\"1.0\\\"?>\\n\" + \n" + " \"<notifications xmlns=\\\"http://xmlns.opennms.org/xsd/notifications\\\">\\n\" + \n" + ... | 48885 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48885/acd9f3285ecdc4e0e9424b89d8a97348cd0a8ae4/NotifdTest.java/clean/src/services/org/opennms/netmgt/notifd/NotifdTest.java | [
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public void accept(NodeVisitor iVisitor) { iVisitor.visitForNode(this); } | public void accept(NodeVisitor iVisitor) { iVisitor.visitForNode(this); } | public void accept(NodeVisitor iVisitor) { iVisitor.visitForNode(this); } | 50993 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50993/2f13ba47385b7584839c7f6f6f1abfee251cbe53/ForNode.java/buggy/org/jruby/nodes/ForNode.java | [
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match(']'); | } | public void mRBRACK() throws RecognitionException { int type = RBRACK; int start = getCharIndex(); int line = getLine(); int charPosition = getCharPositionInLine(); int channel = Token.DEFAULT_CHANNEL; // /Users/bob/Documents/workspace/jbossrules/drools-compiler/src/main/ja... | 6736 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6736/7e425814ce563fcc662b266adb2a4dc8e1a95d19/JavaParserLexer.java/buggy/drools-compiler/src/main/java/org/drools/semantics/java/parser/JavaParserLexer.java | [
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int index = itsData.itsVariableTable.getOrdinal(name); | int index = itsVariableTable.getOrdinal(name); | private int generateICode(Node node, int iCodeTop) { int type = node.getType(); Node child = node.getFirstChild(); Node firstChild = child; switch (type) { case TokenStream.FUNCTION : { iCodeTop = addByte((... | 7555 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7555/bd4398308e7a90b8c0479568416af0bb30da587c/Interpreter.java/clean/js/rhino/src/org/mozilla/javascript/Interpreter.java | [
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throws InvalidValue; | throws InvalidValue; | DynAny member() throws InvalidValue; | 47947 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47947/36718ba08db6631df8ab9fb801d408ca98ad4420/DynUnionOperations.java/buggy/org/omg/DynamicAny/DynUnionOperations.java | [
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try { | try { | public IWizardPage getNextPage() { // save the product information to the model saveDataToModel(); NewBugWizard wizard = (NewBugWizard) getWizard(); NewBugModel model = wizard.model; // try to get the attributes from the bugzilla server try { if (!model.hasParsedAttributes() || !prevProduct.equals(model.getPro... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/a668a4d0cd9272f81a8faa996af0344a2be65552/WizardProductPage.java/clean/org.eclipse.mylyn.bugzilla.ui/src/org/eclipse/mylyn/bugzilla/ui/wizard/WizardProductPage.java | [
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.append( "&" + URLEncoder.encode( key, "UTF-8" ) + "=" + URLEncoder.encode( value, "UTF-8" ) ); | .append( ParameterAccessor .getQueryParameterString( URLEncoder .encode( key, ParameterAccessor.UTF_8_ENCODE ), URLEncoder .encode( value, ParameterAccessor.UTF_8_ENCODE ) ) ); | protected String buildDrillAction( IAction action, Object context ) { String baseURL = null; if ( context != null && context instanceof HTMLRenderContext ) { baseURL = ( (HTMLRenderContext) context ).getBaseURL( ); } StringBuffer link = new StringBuffer( ); String reportName = action.getReportName( ); if ( re... | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/1ff9aa843f70ddf72ba7891c54d9d7216c9063f5/ViewerHTMLActionHandler.java/clean/viewer/org.eclipse.birt.report.viewer/birt/WEB-INF/classes/org/eclipse/birt/report/service/ViewerHTMLActionHandler.java | [
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if (version == Constants.XML_VERSION_1_1){ | if (version == Constants.XML_VERSION_1_1) { | public boolean parse(boolean complete) throws XNIException, IOException { // // reset and configure pipeline and set InputSource. if (fInputSource !=null) { try { fVersionDetector.reset(this); reset(); short version = fVersionDetec... | 6373 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6373/26a8a0c944a205dec7a37ec7d5c2a006bfe5c0a2/XML11Configuration.java/buggy/src/org/apache/xerces/parsers/XML11Configuration.java | [
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if( binding instanceof ICPPInternalBinding ) ((ICPPInternalBinding)binding).removeDeclaration( name ); name.setBinding( null ); | boolean clear = bindings.containsKey( name.getBinding() ); if( !clear && binding instanceof ICPPTemplateInstance ){ IType [] args = ((ICPPTemplateInstance)binding).getArguments(); for( int i = 0; i < args.length; i++ ){ if( bindings.containsKey( args[i] ) ){ clear = true; break; } } } if( clear ){ if( binding instanceo... | public int visit(IASTName name) { if( name.getBinding() != null && bindings.containsKey( name.getBinding() ) ){ IBinding binding = name.getBinding(); if( binding instanceof ICPPInternalBinding ) ((ICPPInternalBinding)binding).removeDeclaration( name ); name.setBinding( null ); } return PROCESS_CONT... | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/f7d25b8b16f24e5160e0e1576dccf6195e7a8e6b/CPPTemplates.java/buggy/core/org.eclipse.cdt.core/parser/org/eclipse/cdt/internal/core/dom/parser/cpp/CPPTemplates.java | [
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AST __t2045 = _t; | AST __t2049 = _t; | public final void systemdialogfontstate(AST _t) throws RecognitionException { AST systemdialogfontstate_AST_in = (_t == ASTNULL) ? null : (AST)_t; AST __t2043 = _t; AST tmp1262_AST_in = (AST)_t; match(_t,SYSTEMDIALOG); _t = _t.getFirstChild(); AST tmp1263_AST_in = (AST)_t; match(_t,FONT); _t = _t.getNextSi... | 13952 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13952/daa15e07422d3491bbbb4d0060450c81983332a4/JPTreeParser.java/clean/trunk/org.prorefactor.core/src/org/prorefactor/treeparserbase/JPTreeParser.java | [
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case Event.DISCONNECT: passDown(evt); break; | case Event.DISCONNECT: passDown(evt); break; | public void down(Event evt) { Message msg; long time_to_wait, start_time; switch(evt.getType()) { case Event.FIND_INITIAL_MBRS: // sent by GMS layer, pass up a GET_MBRS_OK event initial_members.removeAllElements(); msg=new Message(null, null, null); ... | 49475 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49475/cdea1d71ad7f455a500841b398f04e654a5c5228/TCPPING.java/buggy/src/org/jgroups/protocols/TCPPING.java | [
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endMark = rc.getTextPainter().selectAll(x, y, aci, anchor, rc); | endMark = rc.getTextPainter().selectAll(x-location.getX(), y-location.getY(), aci, anchor, rc); | public void selectAll(double x, double y, GraphicsNodeRenderContext rc) { endMark = rc.getTextPainter().selectAll(x, y, aci, anchor, rc); beginMark = endMark; return; } | 46680 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46680/696f00cdae32ea0084c1aad066222ac5aa5cc533/ConcreteTextNode.java/clean/sources/org/apache/batik/refimpl/gvt/ConcreteTextNode.java | [
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TaskRepository repository2 = new TaskRepository(DEFAULT_KIND, new URL(ANOTHER_URL)); | TaskRepository repository2 = new TaskRepository(DEFAULT_KIND, ANOTHER_URL); | public void testRepositoryPersistanceAfterDelete() throws MalformedURLException { manager.clearRepositories(); assertEquals("", MylarTaskListPlugin.getPrefs().getString(TaskRepositoryManager.PREF_REPOSITORIES + DEFAULT_KIND)); TaskRepository repository = new TaskRepository(DEFAULT_KIND, new URL(DEFAULT_URL)); ma... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/5b50d3afe01b1820190de900979c9823401a70e1/TaskRepositoryManagerTest.java/clean/org.eclipse.mylyn.tasks.tests/src/org/eclipse/mylyn/tasklist/tests/TaskRepositoryManagerTest.java | [
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while (datalines.size() > maxdatalines) { dl = (DataLine)datalines.remove(0); i = dl.iterator(); while (i.hasNext()) { DataElem de = (DataElem)i.next(); de.index_info.removeSample (de.stamp); } } | if (maxdatalines >= 0) { while (datalines.size() > maxdatalines) { dl = (DataLine)datalines.remove(0); i = dl.iterator(); while (i.hasNext()) { DataElem de = (DataElem)i.next(); de.index_info.removeSample (de.stamp); } } } | private void addDataLine (DataLine new_dl) { Iterator i; DataLine dl; while (datalines.size() > maxdatalines) { dl = (DataLine)datalines.remove(0); i = dl.iterator(); while (i.hasNext()) { DataElem de = (DataElem)i.next(); de.index_info.removeSample (de.stamp); } } datalines.add(new_dl); } | 7933 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7933/be44d6c7d7583b828a1d4e9ab481ae964eed9380/LabeledPerfDataCollector.java/clean/modules/jackal/perfmonitor/org/vrjuggler/jccl/perfmonitor/LabeledPerfDataCollector.java | [
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OntResource range = (OntResource) r.next(); if (r.hasNext()) { throw new Exception("Property: " + prop.getURI().toString() + " has more than one defined range."); | if (range == null) { return; | protected void processProperty(OntModel ontModel, OntProperty prop, boolean isInverse) throws Exception { Iterator r = prop.listRange(); Iterator d = prop.listDomain(); String reverseRef = null; OntProperty invProp = null; Iterator inverse = prop.listInverse(); if ... | 7196 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7196/457e472c4d85a3e17847c1d637a736cc24690e2f/Owl2FlyMine.java/clean/intermine/src/java/org/intermine/ontology/Owl2FlyMine.java | [
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base = out; tlist.clear(); | base = out; tlist.clear(); | void closeStartTag () { if (attrCount < 0 || stringizingLevel > 0) return; inStartTag = false; previous = 0; if (attrLocalName != null) // Should only happen on erroneous input. endAttribute(); NamespaceBinding outer = nesting == 0 ? NamespaceBinding.predefinedXML : (NamespaceBinding) w... | 36952 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/36952/d88ad71a225b18aebdc59328e031356cdaf5a99d/XMLFilter.java/buggy/gnu/xml/XMLFilter.java | [
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public void testGetRepositoryEntry() throws MalformedURLException { LeafNode leaf = repo.createLeafNode("http: | public void testGetRepositoryEntry() throws Exception { RepositoryNode leaf = repo.createNewNode("http: | public void testGetRepositoryEntry() throws MalformedURLException { LeafNode leaf = repo.createLeafNode("http://www.example.com/testDir/branch1/leaf1"); leaf.makeNewVersion(); leaf.sealNewVersion(); leaf = repo.createLeafNode("http://www.example.com/testDir/branch1/leaf2"); leaf.makeNewVersion()... | 8150 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8150/9df113a72093776d30a21e9427753f6accfc7565/TestLockssRepositoryImpl.java/clean/test/src/org/lockss/repository/TestLockssRepositoryImpl.java | [
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visibility(cd); | visibility(opt, cd); | private void operations(ConstructorDoc m[]) { for (ConstructorDoc cd : m) { if (hidden(cd)) continue; visibility(cd); opt.w.print(cd.name()); if (opt.showType) { opt.w.print("("); parameter(cd.parameters()); opt.w.print(")"); } else opt.w.print("()"); opt.w.print("\\l"); opt.w.print... | 47201 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47201/405b179f20c0c73d6e8668ae781ecb16eb4758ba/ClassGraph.java/buggy/src/org/umlgraph/doclet/ClassGraph.java | [
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|| ce.getMovementMode() == IEntityMovementMode.VTOL) { | || ce.getMovementMode() == IEntityMovementMode.VTOL || ce.getMovementMode() == IEntityMovementMode.BIPED_SWIM || ce.getMovementMode() == IEntityMovementMode.QUAD_SWIM) { | private void updateButtons() { final Entity ce = ce(); boolean isMech = (ce instanceof Mech); boolean isInfantry = (ce instanceof Infantry); boolean isProtomech = (ce instanceof Protomech); // ^-- I suppose these should really be methods, a-la Entity.canCharge(), Entity.canD... | 4135 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4135/97440d7453a8e7dddf56eea92a9444856c33f01d/MovementDisplay.java/clean/megamek/src/megamek/client/ui/AWT/MovementDisplay.java | [
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String bits = (String) metadata.get("significant_bits"); String fmt = (String) metadata.get("format"); | int bitsPerPixel = Integer.parseInt((String) metadata.get("significant_bits")); String format = (String) metadata.get("format"); | protected void initFile(String id) throws FormatException, IOException { super.initFile(id); String icsId = id, idsId = id; int dot = id.lastIndexOf("."); String ext = dot < 0 ? "" : id.substring(dot + 1).toLowerCase(); if(ext.equals("ics")) { // convert C to D regardless of case char[] c = i... | 49800 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49800/f900d398818eefec3108ce2138214e42901a0aa0/ICSReader.java/clean/loci/formats/in/ICSReader.java | [
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IWorkingSet[] result = dialog.getSelection(); if (result != null && result.length > 0) { workbenchPage.setWorkingSet(result[0]); | if (dialog.open() == Window.OK) { IWorkingSet[] result = dialog.getSelection(); if (result != null && result.length > 0) { workbenchPage.setWorkingSet(result[0]); } else { workbenchPage.setWorkingSet(null); } | public void run() { if (window != null) { IWorkbenchPage page = window.getActivePage(); IWorkingSetSelectionDialog dialog = WorkbenchPlugin.getDefault().getWorkingSetManager().createWorkingSetSelectionDialog(window.getShell(), false); IWorkingSet workingSet = page.getWorkingSet(); if (workingSet != null) { dialog... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/68db7969b09b5aae658489d49063ce265a3c41c3/SelectWorkingSetAction.java/buggy/bundles/org.eclipse.ui/Eclipse UI/org/eclipse/ui/internal/SelectWorkingSetAction.java | [
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return RubyString.newString(recv.getRuntime(), "nil"); | return recv.getRuntime().newString("nil"); | public static RubyString inspect(IRubyObject recv) { return RubyString.newString(recv.getRuntime(), "nil"); } | 45753 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45753/870e1da9b41bfdbae259e1fc5f18fc8b76686998/RubyNil.java/buggy/src/org/jruby/RubyNil.java | [
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binaryReply response = submit(); | RawReply response = submit(); | private void p_invoke() throws SystemException, ForwardRequest { binaryReply response = submit(); if (m_rph == null) m_rph = response.header.create_reply_header(); cdrBufInput input = response.getStream(); input.setOrb(orb); m_rph.read(input); // The stream must be aligned sinve v1.2, but o... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/e9344cb85925e12da0e0cccb4ba0521d8696a226/gnuRequest.java/buggy/core/src/classpath/gnu/gnu/CORBA/gnuRequest.java | [
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int maxRows = stmt.getMaxRows(); | final int maxRows = stmt.getMaxRows(); | void checkMaxRows(java.sql.Statement stmt) throws java.sql.SQLException, TdsException { if (stmt == null) { // internal usage return; } int maxRows = stmt.getMaxRows(); if ( maxRows != this.maxRows) { submitProcedure("set rowcount " + maxRows, new SQL... | 439 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/439/d40d3f03f21e7087ea2cd7d2b5b43625542770cc/Tds.java/buggy/trunk/jtds/src/main/net/sourceforge/jtds/jdbc/Tds.java | [
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throw new SQLException(pg_stream.ReceiveString(4096)); | throw new SQLException(pg_stream.ReceiveString(receive_sbuf, 4096, getEncoding())); | protected void openConnection(String host, int port, Properties info, String database, String url, Driver d) throws SQLException { // Throw an exception if the user or password properties are missing // This occasionally occurs when the client uses the properties version // of getConnection(), and is a ... | 52628 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52628/f41dcbe4d810f0906f43d1b345cf506d72c792ac/Connection.java/buggy/src/interfaces/jdbc/org/postgresql/Connection.java | [
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m = Helper.getMemberBySubject(nrs, subj1); | m = Helper.getMemberBySubject(nrs, subj1); | protected void setUp () { Db.refreshDb(); s = SessionHelper.getRootSession(); nrs = SessionHelper.getSession(SubjectHelper.SUBJ0_ID); root = StemHelper.findRootStem(s); edu = StemHelper.addChildStem(root, "edu", "educational"); i2 = StemHelper.addChildGroup(edu, "i2", "internet2"); uo... | 5235 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5235/473d91a4aab6bcc7ec60568e2da0e57ed98d0cbb/TestPrivVIEW.java/buggy/grouper/src/tests/test/edu/internet2/middleware/grouper/TestPrivVIEW.java | [
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public static Date fromDate(byte src[], int offset) throws IllegalArgumentException { long when = fromLong(src, offset, DATE_LENGTH); if (when <= 0) return null; else return new Date(when); | public static Date fromDate(byte src[], int offset) throws DataFormatException { if ( (src == null) || (offset + DATE_LENGTH > src.length) ) throw new DataFormatException("Not enough data to read a date"); try { long when = fromLong(src, offset, DATE_LENGTH); if (when <= 0) return null; else return new Date(when); } ca... | public static Date fromDate(byte src[], int offset) throws IllegalArgumentException { long when = fromLong(src, offset, DATE_LENGTH); if (when <= 0) return null; else return new Date(when); } | 27493 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/27493/1107e50108f2845c6b117044e0ab95019b20a309/DataHelper.java/clean/core/java/src/net/i2p/data/DataHelper.java | [
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packetWriter.setWriter(writer); packetWriter.openStream(); } catch (Exception e) { packetReader.notifyConnectionError(e); } | packetWriter.setWriter(writer); packetWriter.openStream(); | void proceedTLSReceived() { try { SSLContext context = SSLContext.getInstance("TLS"); // Accept any certificate presented by the server context.init(null, // KeyManager not required new javax.net.ssl.TrustManager[] { new OpenTrustManager() }, ... | 7665 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7665/e90dbbde8b4f5f9b6d36d439605e3b0c84eb42b3/XMPPConnection.java/buggy/source/org/jivesoftware/smack/XMPPConnection.java | [
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nextStates.add(CandidacySituationType.ADMITTED.toString()); nextStates.add(CandidacySituationType.NOT_ADMITTED.toString()); nextStates.add(CandidacySituationType.SUBSTITUTE.toString()); | nextStates.add(CandidacySituationType.ADMITTED.toString()); nextStates.add(CandidacySituationType.NOT_ADMITTED.toString()); nextStates.add(CandidacySituationType.SUBSTITUTE.toString()); | public Set<String> getValidNextStates() { Set<String> nextStates = new HashSet<String>(); nextStates.add(CandidacySituationType.REGISTERED.toString()); nextStates.add(CandidacySituationType.ADMITTED.toString()); nextStates.add(CandidacySituationType.NOT_ADMITTED.toString()); nextStates.add(CandidacySituati... | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/70d28b57a6a60f028c5ac856571d9723b2954b62/AdmittedCandidacySituation.java/clean/src/net/sourceforge/fenixedu/domain/candidacy/AdmittedCandidacySituation.java | [
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super(componentName); | super(id); | public UL(String componentName, List list, int level) { super(componentName); this.level = level; WebMarkupContainer ul = new WebMarkupContainer("ul"); ul.add(new AttributeModifier("id", true, new Model(getLevelAsString()))); Rows rows = new Rows("rows", list); ul.add(rows);... | 46434 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46434/8b5b226048f476b89f4d032e96a0419b2e965170/MenuBorder.java/buggy/wicket-sandbox/src/eelco/java/navmenu/MenuBorder.java | [
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} else { threadLocal = m_joinPoints[joinPointIndex]; | public final Object proceedWithCallJoinPoint(final int methodHash, final int joinPointIndex, final Object[] parameters, final Class targetClass, final Object targetInstance, final Class thisClass, ... | 7954 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7954/d2f578587dcd54289cbfbc4c2364b26ec5866a2b/JoinPointManager.java/clean/aspectwerkz3/src/main/org/codehaus/aspectwerkz/joinpoint/management/JoinPointManager.java | [
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public ResultSet getExportedKeys(String catalog, String schema, String table) throws SQLException { checkCatalogAndSchema(catalog, schema); Clause tableClause = new Clause("PK.RDB$RELATION_NAME", table); String sql = GET_EXPORTED_KEYS_START; sql += tableClause.getCondition... | 6960 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6960/627def55c97b8bb66af3471f8047199de1f4d1c9/FBDatabaseMetaData.java/clean/src/org/firebirdsql/jdbc/FBDatabaseMetaData.java | [
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ClassFileWriter.ACC_STATIC); | ClassFileWriter.ACC_STATIC); | private void emitConstantDudeInitializers() { int N = itsConstantListSize; if (N == 0) return; cfw.startMethod("<clinit>", "()V", (short)(ClassFileWriter.ACC_STATIC + ClassFileWriter.ACC_FINAL)); double[] array = itsConstantList; for (int i = 0; i != N; ++i) ... | 19042 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19042/df6e3ed45793449d4d2f8ff32a2c6552165f2303/Codegen.java/buggy/src/org/mozilla/javascript/optimizer/Codegen.java | [
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.append("default:") | .append(" default: ") | public void _tableswitch( int pc, int defaultoffset, int low, int high, int[] jump_offsets) { dumpPcNumber(pc); buffer.append(OpcodeStringValues.BYTECODE_NAMES[IOpcodeMnemonics.TABLESWITCH]) .append("default:") //$NON-NLS-1$ .append(defaultoffset + pc); writeNewLine(); for (int i = low; i < high + 1; i++... | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/2181930e602cb49419681b4577162e491ccc0f44/DefaultBytecodeVisitor.java/buggy/org.eclipse.jdt.core/model/org/eclipse/jdt/internal/core/util/DefaultBytecodeVisitor.java | [
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} catch (NonExistantObjectIDException e) { e.printStackTrace(); | private void processLockedObjects(boolean commit) { List<SGSUUID> listeners = new ArrayList<SGSUUID>(); for (Entry<Long, Serializable> entry : lockedObjectsMap.entrySet()) { Long l = entry.getKey(); try { keyTrans.lock(l); TSODataHeader hdr = (TSODataHeader) keyTrans.read(l); hdr.free = true; keyTran... | 48631 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48631/2047398952dc1a021679c3c4d8acc712f50310a8/TSOTransaction.java/clean/src/com/sun/gi/objectstore/tso/TSOTransaction.java | [
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public void test4Sphere() { String[] result = { "O-1;=C(CC/CC,C/CC,C,&)", "C-3;=OCC(,CC,C/CC,C,&/CC,&C,&O)", "C-2;CC(=OC,C/,CC,&C/C&,C,C)", "C-2;CC(C,CC/=OC,C&,C/,&C,CC,&)", "C-3;CCC(CC,C,C/CC,CC,&,&/=O&,C,C&,&O)", "C-2;CC(CC,C/CC,C,&C/C&,CC,&,CC)", "C-2;CC(CC,C/CC,CC,&C/C&,CO,C&,C,C)",... | 45167 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45167/6d8aa3922ced07dd7b9196063ada12eff10f95ef/HOSECodeTest.java/buggy/src/org/openscience/cdk/test/tools/HOSECodeTest.java | [
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_stack[index = 0] = node; if (node > ROOTNODE) { while ((parent = _parent[node]) != ROOTNODE) { if (++index == _stack.length) { final int[] stack = new int[index + 4]; System.arraycopy(_stack, 0, stack, 0, index); _stack = stack; } _stack[index] = node = parent; | int parent = node; while ((parent = _parent[parent]) >= ROOTNODE) { if (_sp == _stack.length) { final int[] stack = new int[_sp + 4]; System.arraycopy(_stack, 0, stack, 0, _sp); _stack = stack; | public NodeIterator setStartNode(int node) { if (_isRestartable) { // iterator is not a clone int parent, index; _startNode = node; _node = ROOTNODE; _stack[index = 0] = node; if (node > ROOTNODE) { while ((parent = _parent[node]) != ROOTNODE) { if (++index == _stack.length) { final int[] stack ... | 46591 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46591/1fb940933ef692837ec0be2ad9a6d71a909e43f3/DOMImpl.java/buggy/src/org/apache/xalan/xsltc/dom/DOMImpl.java | [
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AttributedCharacterIterator fontaci = createModifiedACIForFontMatching(node, aci); fontaci.first(); /* * We iterate through the spans over extended attributes, * instantiating TextLayout elements as we go, and * accumulate an overall advance for the text display. */ | private List getTextRuns(TextNode node, AttributedCharacterIterator aci, FontRenderContext frc) { List textRuns = node.getTextRuns(); if (textRuns != null) { return textRuns; } textRuns = new ArrayList(); Attribute... | 46680 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46680/792794ccd7fe962007f2619e9327e785b859ecfe/StrokingTextPainter.java/clean/sources/org/apache/batik/gvt/renderer/StrokingTextPainter.java | [
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if (!(operation instanceof IAdvancedUndoableOperation)) | if (!(operation instanceof IAdvancedUndoableOperation)) { | private IStatus proceedWithOperation(IUndoableOperation operation, String message, String discardButton) { // if the operation cannot tell us about its modified elements, there's // nothing we can do. if (!(operation instanceof IAdvancedUndoableOperation)) return Status.OK_STATUS; // Obtain the operation's aff... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/fa4a8cff0e027f8d3c6b1fcb92b30f46767dd191/NonLocalUndoUserApprover.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/operations/NonLocalUndoUserApprover.java | [
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return false; } | boolean hasBreakpoint(int line) { byte[] breakpoints = this.breakpoints; if (breakpoints != null && line < breakpoints.length) { return breakpoints[line] == BREAK_FLAG; } return false; } | 11366 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11366/677ac1cd7685aceb4fdd606aa3e6c9cea9f6d6cb/Main.java/buggy/js/rhino/toolsrc/org/mozilla/javascript/tools/debugger/Main.java | [
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return panel; | JPanel engineChoicePanel = new JPanel(); engineChoicePanel.setLayout(new GridLayout(1, 2)); engineChoicePanel.add(left); engineChoicePanel.add(right); return engineChoicePanel; | private JComponent createEnginePanel() { Box panel = Box.createHorizontalBox(); Box left = Box.createVerticalBox(); Box right = Box.createVerticalBox(); panel.add(left); panel.add(right); left.add(new JLabel("Available engines")); right.add(new JLabel("Engines used")... | 23362 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/23362/b5abd8fd04d285a1b80a4816863d054b8bf79db3/DispatcherGUI.java/clean/src/org/objectweb/proactive/examples/c3d/gui/DispatcherGUI.java | [
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String prefix = PropUtils.getScopedPropertyPrefix(this); props.put(prefix + shapeFileProperty, (shapeFileName==null?"":shapeFileName)); props.put(prefix + spatialIndexProperty, (spatialIndexFileName==null?"":spatialIndexFileName)); props.put(prefix + pointImageURLProperty, (imageURLString==null?"":imageURLString)); | String prefix = PropUtils.getScopedPropertyPrefix(this); props.put(prefix + shapeFileProperty, (shapeFileName==null?"":shapeFileName)); props.put(prefix + spatialIndexProperty, (spatialIndexFileName==null?"":spatialIndexFileName)); props.put(prefix + pointImageURLProperty, (imageURLString==null?"":imageURLString)); | public Properties getProperties(Properties props) { props = super.getProperties(props); String prefix = PropUtils.getScopedPropertyPrefix(this); props.put(prefix + shapeFileProperty, (shapeFileName==null?"":shapeFileName)); props.put(prefix + spatialIndexProperty, (spatialIndexFileName==null?"":spatialIndex... | 3071 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3071/b510b23a2f6e3a1833c274dda10d99f77db59ed1/ShapeLayer.java/clean/src/openmap/com/bbn/openmap/layer/shape/ShapeLayer.java | [
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if (root.exists(new Path(newContainerName))) fContainer = root.getContainerForLocation(workspacePath.append(newContainerName)); else if (fProject != null && fProject.exists(new Path(newContainerName))) fContainer = root.getContainerForLocation(fProject.getLocation().append(newContainerName)); else{ handleInvalidContain... | IWorkspaceRoot root = PDECore.getWorkspace().getRoot(); IResource resource = root.findMember(new Path(newContainerName)); if (resource instanceof IContainer) { fContainer = (IContainer)resource; handleValidContainer(); return true; | private boolean validateContainer() { if (isPluginIdNeeded() && !isPluginIdFinal()){ String newContainerName = fSchemaLocationText.getText(); IWorkspaceRoot root = PDECore.getWorkspace().getRoot(); IPath workspacePath = root.getLocation(); if (newContainerName.startsWith(workspacePath.toString())) newConta... | 14404 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14404/d5622063c9a61dcafe5e4a802f3a9b477efbc3f7/BaseExtensionPointMainPage.java/buggy/ui/org.eclipse.pde.ui/src/org/eclipse/pde/internal/ui/wizards/extension/BaseExtensionPointMainPage.java | [
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if (rval == JFileChooser.APPROVE_OPTION) { | if (rval == JFileChooser.APPROVE_OPTION) { | public void exportNotes() { if(tPanels != null) { Hashtable topHash = new Hashtable(); Vector names = new Vector(); for(int i = 0;i < tPanels.size();i++) { MetadataPane.TablePanel thisPanel = (MetadataPane.TablePanel) tPanels.get(i); Hashtable noteHash = thisPanel.noteP.getNoteHash(); ... | 46826 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46826/557a93a201e2f0530cb2de2bc8c33b83b9b8b97f/NotePane.java/buggy/loci/ome/notebook/NotePane.java | [
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Integer localCount = (Integer)(tree.getProp(Node.LOCALCOUNT_PROP)); if (localCount == null) { tree.putProp(Node.LOCALCOUNT_PROP, new Integer(1)); } else { tree.putProp(Node.LOCALCOUNT_PROP, new Integer(localCount.intValue() + 1)); } | int localCount = tree.getIntProp(Node.LOCALCOUNT_PROP, 0); tree.putIntProp(Node.LOCALCOUNT_PROP, localCount + 1); | public Node transform(Node tree, Node enclosing, TokenStream ts, Scriptable scope) { loops = new Stack(); loopEnds = new Stack(); inFunction = tree.getType() == TokenStream.FUNCTION; if (!inFunction) { addVariables(tree, getVariableTable(tree)); ... | 47345 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47345/7f850f6162d49fce5f2a418eb4b32ba1cf9d58bf/NodeTransformer.java/clean/src/org/mozilla/javascript/NodeTransformer.java | [
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if (isSingleton()) { if (getInstanceVariables() == null) { setInstanceVariables(new RubyHashMap()); } | if (isSingleton()) { if (getInstanceVariables() == null) { setInstanceVariables(new RubyHashMap()); } | public void attachSingletonClass(RubyObject rbObject) { if (isSingleton()) { if (getInstanceVariables() == null) { setInstanceVariables(new RubyHashMap()); } getInstanceVariables().put(getRuby().intern("__atached__"), rbObject); } } | 49687 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49687/0a7181933af700ea8025a4197f3a5ebcc08333c3/RubyModule.java/buggy/org/jruby/RubyModule.java | [
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private static boolean queryAdjacency(IBond a1, IBond b1, IBond a2, IBond b2) { IAtom atom1 = null; IAtom atom2 = null; if (a1.contains(b1.getAtomAt(0))) { atom1 = b1.getAtomAt(0); } else if (a1.contains(b1.getAtomAt(1))) { atom1 = b1.getAtomAt(1); } if (a2.... | 45254 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45254/56c201de67d3ab0b41150bdf3c9bae4980107820/UniversalIsomorphismTester.java/clean/src/org/openscience/cdk/isomorphism/UniversalIsomorphismTester.java | [
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return false; | return res; | public boolean getScrollableTracksViewportWidth() { if (getParent() instanceof JViewport) return getParent().getWidth() > getPreferredSize().width; return false; } | 47947 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47947/1df827c7017ec51d388df820b0f34b66617c0646/JTextComponent.java/clean/javax/swing/text/JTextComponent.java | [
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dHeight = Math.max( dFullHeight, dHeight ); } else if ( direction.getValue( ) == Direction.TOP_BOTTOM ) { | dHeight = Math.max( dRealHeight, dHeight ); } else if ( direction.getValue( ) == Direction.TOP_BOTTOM ) { | public final Size compute( IDisplayServer xs, Chart cm, SeriesDefinition[] seda, RunTimeContext rtc ) throws ChartException { // THREE CASES: // 1. ALL SERIES IN ONE ARRAYLIST // 2. ONE SERIES PER ARRAYLIST // 3. ALL OTHERS Legend lg = cm.getLegend( ); if ( !lg.isSetOrientation( ) ) { throw new ChartExcepti... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/ad38cf76f1d641ada210d2a5b0551677d4e55a71/LegendBuilder.java/buggy/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/computation/LegendBuilder.java | [
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inputButton.setText( Messages.getString( "ImageBuilderDialog.Label.Open" ) ); | inputButton.setText( Messages.getString( "ImageBuilder.Label.Open" ) ); | private void swtichToExprType( ) { Label title = new Label( inputArea, SWT.NONE ); uriEditor = new Text( inputArea, SWT.SINGLE | SWT.BORDER ); uriEditor.setLayoutData( new GridData( GridData.FILL_HORIZONTAL ) ); uriEditor.addModifyListener( new ModifyListener( ) { public void modifyText( ModifyEvent e ) { u... | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/5751a8ecebb4c1d996f224af72dadd18c0d44423/ImageBuilder.java/clean/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/ui/dialogs/ImageBuilder.java | [
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int count=0; | int end, pix; | public static WritableRaster applyLut_INT(WritableRaster wr, final int []lut) { SinglePixelPackedSampleModel sm = (SinglePixelPackedSampleModel)wr.getSampleModel(); DataBufferInt db = (DataBufferInt)wr.getDataBuffer(); final int srcBas... | 45946 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45946/61ef960639dc9d1a174b39c83226e716899e2d8a/Any2sRGBRed.java/clean/sources/org/apache/batik/ext/awt/image/rendered/Any2sRGBRed.java | [
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HashMap envs = new HashMap(); envs.put(runtime.newString("HOME"), runtime.newString(System.getProperty("user.home"))); runtime.defineGlobalConstant("ENV", RubyHash.newHash(runtime, envs, runtime.getNil())); | public static void createGlobals(IRuby runtime) { // Version information: IRubyObject version = runtime.newString(Constants.RUBY_VERSION).freeze(); IRubyObject release = runtime.newString(Constants.COMPILE_DATE).freeze(); IRubyObject platform = runtime.newString(Constants.PLATFORM).freez... | 45298 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45298/f67bf159b486fa2ceb3335f98a350e2e5fefe664/RubyGlobal.java/buggy/src/org/jruby/RubyGlobal.java | [
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rowModel.setLeadSelectionIndex(rowLead); | public void actionPerformed (ActionEvent e) { DefaultListSelectionModel rowModel = (DefaultListSelectionModel) table.getSelectionModel(); DefaultListSelectionModel colModel = (DefaultListSelectionModel) table.getColumnModel().getSelectionModel(); int rowLead = rowModel.getLeadSelectionIndex(); ... | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/8a78b0a127a68dcc6823fee2b8bdb1cbb7ec268d/BasicTableUI.java/buggy/core/src/classpath/javax/javax/swing/plaf/basic/BasicTableUI.java | [
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entry.getScript(context, this.scope, needsRefresh); } for (int i = 0, size = execList.size(); i < size; i++) { String sourceURI = (String)execList.get(i); ScriptSourceEntry entry = (ScriptSourceEntry)compiledScripts.get(sourceURI); long lastMod = entry.getSource().getLastModified(); Script script = entry.getScript(co... | for (int i = 0, size = execList.size(); i < size; i++) { String sourceURI = (String)execList.get(i); ScriptSourceEntry entry = (ScriptSourceEntry)compiledScripts.get(sourceURI); long lastMod = entry.getSource().getLastModified(); Script script = entry.getScript(context, this.scope, false); if (lastExecTime == 0 || las... | protected Scriptable enterContext(Environment environment) throws Exception { Context context = Context.enter(); context.setOptimizationLevel(OPTIMIZATION_LEVEL); context.setGeneratingDebug(true); context.setCompileFunctionsWithDynamicScope(true); context.setErrorReporte... | 46428 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46428/acb818ee12a0a5d1b9161b850e2ea9bd6c5ce676/JavaScriptInterpreter.java/buggy/src/java/org/apache/cocoon/components/flow/javascript/JavaScriptInterpreter.java | [
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return handler.getDefaultPort(); } | return handler.getDefaultPort(); } | public int getDefaultPort() { return handler.getDefaultPort(); } | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/e204bcd94e42168df8116332c5e2f0db99bd1c55/URL.java/clean/core/src/classpath/java/java/net/URL.java | [
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public YWorkItem startWorkItem(YWorkItem workItem, String userID) throws YStateException, YDataStateException, YQueryException, YSchemaBuildingException, YPersistenceException {// YPersistenceManager pmgr = null; logger.debug("--> startWorkItem"); try {// TODO if (isJo... | 51637 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51637/b395edd9ca5b4b2fa7f2479b8cfd86f3c69a7c6a/AbstractEngine.java/buggy/yawl/src/au/edu/qut/yawl/engine/AbstractEngine.java | [
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error = CSharpCompiler.parseLine( "error CS2008: No files to compile were specified" ); | error = DefaultCSharpCompilerParser.parseLine( "error CS2008: No files to compile were specified" ); | public void testParser() throws IOException { CompilerError error; // ---------------------------------------------------------------------- // Test a few concrete lines // ---------------------------------------------------------------------- error = CSharpCompiler.pars... | 55907 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55907/25d682b26916ad1c493bc651ee54f00a7ecceac1/CSharpCompilerTest.java/clean/plexus-compiler/plexus-compilers/plexus-compiler-csharp/src/test/java/org/codehaus/plexus/compiler/csharp/CSharpCompilerTest.java | [
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private static byte refShr(OPT_Instruction s) { | private static DefUseEffect refShr(OPT_Instruction s) { | private static byte refShr(OPT_Instruction s) { if (CF_ADDR) { OPT_Operand op2 = Binary.getVal2(s); if (op2.isIntConstant()) { int val2 = op2.asIntConstant().value; OPT_Operand op1 = Binary.getVal1(s); if (op1.isAddressConstant()) { // BOTH CONSTANTS: FOLD Word val1 ... | 4011 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4011/582eb14323a5e74a2c99b6035e34aa59e229d896/OPT_Simplifier.java/clean/rvm/src/com/ibm/jikesrvm/opt/OPT_Simplifier.java | [
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return authenticationHash; | return conn.getSaslBindProperties(); | public Hashtable getSaslBindProperties() { return authenticationHash; } | 9947 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9947/1b6354a51fb799d6c41e8c8c1279c8af99f3265f/LDAPConnection.java/clean/com/novell/ldap/LDAPConnection.java | [
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Object instance = componentAdapter.getComponentInstance(this); | Object instance = null; try { instance = componentAdapter.getComponentInstance(this); } catch (PicoInitializationException e) { if (parent != null) { return parent.getComponentInstance(componentAdapter.getComponentKey()); } | private Object getInstance(ComponentAdapter componentAdapter) { // check wether this is our adapter // we need to check this to ensure up-down dependencies cannot be followed final boolean isLocal = componentAdapters.contains(componentAdapter); if (isLocal) { Object instance =... | 9344 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9344/f454dbb64efa33852b061bb9933f49034518a4ef/DefaultPicoContainer.java/buggy/java/picocontainer/trunk/container/src/java/org/picocontainer/defaults/DefaultPicoContainer.java | [
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throw new UnsupportedDataTypeException(); | throw new UnsupportedDataTypeException(ods.mimeType); | public void writeTo(OutputStream os) throws IOException { if (ds instanceof ObjectDataSource) { ObjectDataSource ods = (ObjectDataSource) ds; DataContentHandler dch = getDataContentHandler(); if (dch == null) { throw new UnsupportedDataTypeException(); ... | 8608 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8608/e86883e94fb290498c0839d12426a4280efc23e3/DataHandler.java/clean/activation/src/java/javax/activation/DataHandler.java | [
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public static void main(String argv[]) { int i; System.out.println("Tak is running\n"); //for (i=0; i<1000; i++){ double result = tak(18,12,6); System.out.println(result + "\n"); //} //System.exit(0); } | 4011 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4011/356681beb9a1b1b0b9d502ce55ad7fcf711cc145/tak_db.java/buggy/testing/tests/opttests/src/tak_db.java | [
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Collection outputs = new LinkedList(); | Set outputs = new HashSet(); | public void solve() { Collection inputs = new LinkedList(); inputs.addAll(solver.relationsToLoad); inputs.addAll(solver.relationsToLoadTuples); inputs.addAll(solver.equivalenceRelations.values()); inputs.addAll(solver.notequivalenceRelations.values()); Collection ou... | 3029 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3029/eef6a1c9d3867d1cfa8a80c4d97c40c6be9f8e25/Stratify.java/buggy/joeq_core/joeq/Util/InferenceEngine/Stratify.java | [
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addProperties(ctx.getProperties()); | for (Iterator iterator = ctx.getMessage().getPropertyNames(); iterator.hasNext();) { Object o = iterator.next(); setProperty(o, ctx.getMessage().getProperty(o)); } | public ExceptionMessage(Object message, UMOEndpoint endpoint, Throwable exception, UMOEventContext ctx) { super(message); this.exception = exception; timeStamp = new Date(); componentName = ctx.getComponentDescriptor().getName(); if (endpoint != null) { endpointUri =... | 28323 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/28323/1c16135aeffdc8654133a2cfd4e29e2561335937/ExceptionMessage.java/buggy/mule/src/java/org/mule/impl/message/ExceptionMessage.java | [
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Map<String,Object> description = new HashMap<String,Object>(); | private static Map<String,Object> setAllInterestingProperties(SQLObject target, Set<String> propertiesToIgnore) throws Exception { Map<String,Object> description = new HashMap<String,Object>(); PropertyDescriptor props[] = PropertyUtils.getPropertyDescriptors(target); for (int i = 0; i < props.length; i++) { ... | 53257 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53257/9f02dde8edeec34661e5cc475c6897e2ec6b3376/TestSwingUIProject.java/buggy/regress/ca/sqlpower/architect/swingui/TestSwingUIProject.java | [
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String addressString = address.getProtocol() + ": | String addressString = address.toString(); if (addressString.startsWith("file:/")) { String suffix = addressString.substring("file:/".length(), addressString.length()); addressString = "file: } | public boolean openURL(URL address) { // First, try to delegate up. if (super.openURL(address)) { return true; } else { try { // Mac doesn't like how Java formats URLs: // "file:/Users/dir/file.html" isn't legal. // Instead, we need to put more slashes in the protocol: ... | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/01b502b2a5bf789c694d87ab9322d4852a16603d/MacPlatform.java/clean/drjava/src/src-mac14/edu/rice/cs/drjava/platform/MacPlatform.java | [
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for (int i=0; i<obj.length; i++) { selected[i] = obj[i].isSelected(); obj[i].setSelected(false); | for (int i=0; i<obj.length; i++) { selected[i] = obj[i].isSelected(); obj[i].setSelected(false); } | public void valueChanged(ListSelectionEvent e) { if (ignoreEvents) return; OverlayObject[] obj = overlay.getObjects(); boolean[] selected = new boolean[obj.length]; // deselect all previously selected overlays for (int i=0; i<obj.length; i++) { selected[i] = obj[i].isSelected(); obj[i].setSel... | 55303 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55303/d319e20f640031daaa9e60c1d6cee40aee043c38/OverlayWidget.java/clean/loci/visbio/overlays/OverlayWidget.java | [
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super.setUp(); bag = new ReturnObjectBag(getName()); } | super.setUp(); bag = new ReturnObjectBag(getName()); } | protected void setUp() throws Exception { super.setUp(); bag = new ReturnObjectBag(getName()); } | 2796 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2796/065d08edd62599d5d244a9317db470157690f4f9/ReturnObjectBagTest.java/buggy/jmock/core/src/test/jmock/expectation/ReturnObjectBagTest.java | [
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boolean isRequired, boolean isProhibited, NutchConf nutchConf) { this(term, isRequired, isProhibited, nutchConf); | boolean isRequired, boolean isProhibited, Configuration conf) { this(term, isRequired, isProhibited, conf); | public Clause(Term term, String field, boolean isRequired, boolean isProhibited, NutchConf nutchConf) { this(term, isRequired, isProhibited, nutchConf); this.field = field; } | 1316 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1316/25437bc825d50715dcc9a289a1b4c8fbbc6aced1/Query.java/buggy/src/java/org/apache/nutch/searcher/Query.java | [
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public org.quickfix.field.UnderlyingSymbolSfx getUnderlyingSymbolSfx() throws FieldNotFound { org.quickfix.field.UnderlyingSymbolSfx value = new org.quickfix.field.UnderlyingSymbolSfx(); | public quickfix.field.UnderlyingSymbolSfx getUnderlyingSymbolSfx() throws FieldNotFound { quickfix.field.UnderlyingSymbolSfx value = new quickfix.field.UnderlyingSymbolSfx(); | public org.quickfix.field.UnderlyingSymbolSfx getUnderlyingSymbolSfx() throws FieldNotFound { org.quickfix.field.UnderlyingSymbolSfx value = new org.quickfix.field.UnderlyingSymbolSfx(); getField(value); return value; } | 5926 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5926/fecc27f98261270772ff182a1d4dfd94b5daa73d/ListStrikePrice.java/clean/src/java/src/quickfix/fix44/ListStrikePrice.java | [
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return top(indentTop); } | return top(indentTop); } | private int indentTop() { return top(indentTop); } | 3506 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3506/d86be836ae8aa756c59274eabbdd4c1d4b34ea4e/PdfDocument.java/buggy/itext/src/com/lowagie/text/pdf/PdfDocument.java | [
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return RubyFloat.m_newFloat(getRuby(), getDoubleValue() - getDoubleValue()); | return RubyFloat.m_newFloat(getRuby(), getDoubleValue() - other.getDoubleValue()); | public RubyNumeric op_minus(RubyNumeric other) { return RubyFloat.m_newFloat(getRuby(), getDoubleValue() - getDoubleValue()); } | 46258 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46258/09d14a481cf7e28332c61c038c7d4b468854d38d/RubyFloat.java/clean/org/jruby/RubyFloat.java | [
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