rem stringlengths 1 226k | add stringlengths 0 227k | context stringlengths 6 326k | meta stringlengths 143 403 | input_ids listlengths 256 256 | attention_mask listlengths 256 256 | labels listlengths 128 128 |
|---|---|---|---|---|---|---|
Font font = parent.getFont(); | private final void createProjectLocationGroup(Composite parent) { // project specification group Composite projectGroup = new Composite(parent, SWT.NONE); GridLayout layout = new GridLayout(); layout.numColumns = 3; projectGroup.setLayout(layout); projectGroup.setLayoutData(new GridData(GridData.FILL_HORIZONTAL)... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/b4f6cfdee8616a27914e9515373f5aa2637208be/WizardNewProjectNameAndLocationPage.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/dialogs/WizardNewProjectNameAndLocationPage.java | [
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public Comparator<String> getRegistrationOrderComparator() { return new Comparator<String>() { public int compare(String id1, String id2) { return myId2Index.get(id1) - myId2Index.get(id2); } }; } | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/4972de74093751aa507c641e7a852c8feb15d5e3/ActionManagerImpl.java/clean/action-system/impl/com/intellij/openapi/actionSystem/impl/ActionManagerImpl.java | [
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AST __t2456 = _t; AST tmp2446_AST_in = (AST)_t; | AST __t2460 = _t; AST tmp2450_AST_in = (AST)_t; | public final void sqlexpression(AST _t) throws RecognitionException { AST sqlexpression_AST_in = (_t == ASTNULL) ? null : (AST)_t; if (_t==null) _t=ASTNULL; switch ( _t.getType()) { case OR: { AST __t2432 = _t; AST tmp2428_AST_in = (AST)_t; match(_t,OR); _t = _t.getFirstChild(); sqlexpression(_t); ... | 13952 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13952/daa15e07422d3491bbbb4d0060450c81983332a4/JPTreeParser.java/clean/trunk/org.prorefactor.core/src/org/prorefactor/treeparserbase/JPTreeParser.java | [
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paintNonLeaf(g, indentation, descent, tree, curr); | paintNode(g, indentation + 4, descent, tree, curr, false); | private int paintRecursive(Graphics g, int indentation, int descent, int childNumber, int depth, JTree tree, TreeModel mod, Object curr) { Rectangle clip = g.getClipBounds(); if (indentation > clip.x + clip.width + rightChildIndent || descent > clip.y + clip.height + getRowHeight()) return descent; int... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/c4eda97e6e5feb8e7650d83d5066d85580f1249c/BasicTreeUI.java/clean/core/src/classpath/javax/javax/swing/plaf/basic/BasicTreeUI.java | [
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try { serializer.serialize(tempFile, original); clone1 = (ExtMapBean)deserializer1.deserialize(tempFile); clone2 = (ExtMapBean)deserializer2.deserialize(tempFile); assertEquals(clone1.getMap(), clone2.getMap()); } finally { tempFile.deleteOnExit(); } | serializer.serialize(tempFile, original); clone1 = (ExtMapBean)deserializer1.deserialize(tempFile); clone2 = (ExtMapBean)deserializer2.deserialize(tempFile); assertEquals(clone1.getMap(), clone2.getMap()); | public void testDeserializeTwice() throws Exception { // Set up needed objects ObjectSerializer serializer = makeObjectSerializer_ExtMapBean(); ObjectSerializer deserializer1 = makeObjectSerializer_ExtMapBean(); ObjectSerializer deserializer2 = makeObjectSerializer_ExtMapBean(); ExtMapBean origina... | 8150 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8150/08e8b0badc278881c1fcc132d42015e054ac3cca/ObjectSerializerTest.java/clean/test/src/org/lockss/util/ObjectSerializerTest.java | [
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ResourceDef.ResourceBundle resourceList, PrintWriter pw) { String fullClassName = getClassName(null); pw.println("# This file contains the resources for"); pw.println("# class '" + fullClassName + "'; the base locale is '" + resourceList.locale + "'."); pw.println("# It was generated by " + ResourceGen.class); pw.print... | ResourceDef.ResourceBundle resourceList, PrintWriter pw) { String fullClassName = getClassName(null); pw.println("# This file contains the resources for"); pw.println("# class '" + fullClassName + "'; the base locale is '" + resourceList.locale + "'."); pw.println("# It was generated by " + ResourceGen.class); pw.print... | private void generateBaseProperties( ResourceDef.ResourceBundle resourceList, PrintWriter pw) { String fullClassName = getClassName(null); pw.println("# This file contains the resources for"); pw.println("# class '" + fullClassName + "'; the base locale is '" + resourceList.locale + "'."); pw.println("# It wa... | 51263 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51263/b5b5168edc3af09cb74945a80b0c36e6630ed502/XmlFileTask.java/buggy/src/main/mondrian/resource/XmlFileTask.java | [
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Form defaultForm = get(defaultLocale, formKey); | Form defaultForm = get(defaultLocale, formKey); | public void processForms() { //hFormSets.put(buildKey(fs), fs); String defaultKey = defaultLocale.toString(); // Loop through FormSets for (Iterator i = hFormSets.keySet().iterator(); i.hasNext(); ) { String key = (String)i.next(); FormSet fs = (FormSet)hFormSets.get... | 54522 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54522/9ac8d2b8797bcd5beb9e8514b2858d9024b4673d/ValidatorResources.java/buggy/src/share/org/apache/commons/validator/ValidatorResources.java | [
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"Expecting SOAP 1.2 implementation of SOAP Fault Code. But received some other implementation"); | "Expecting SOAP 1.2 implementation of SOAP Fault Code. " + "But received some other implementation"); | public void setCode(SOAPFaultCode soapFaultCode) throws SOAPProcessingException { if (!(soapFaultCode instanceof SOAP12FaultCodeImpl)) { throw new SOAPProcessingException( "Expecting SOAP 1.2 implementation of SOAP Fault Code. But received some other implementation"); } ... | 49300 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49300/46a014bae8b3bdea6efef1d984a295027545ce0c/SOAP12FaultImpl.java/buggy/modules/doom/src/org/apache/axis2/soap/impl/dom/soap12/SOAP12FaultImpl.java | [
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taskSummaryEditor = new TaskSummaryEditor(); | taskSummaryEditor = new TaskInfoEditor(); | public MylarTaskEditor() { super(); IWorkbench workbench = MylarTasklistPlugin.getDefault().getWorkbench(); IWorkbenchWindow window = workbench.getActiveWorkbenchWindow(); IWorkbenchPage activePage = window.getActivePage(); TaskEditorListener listener = new TaskEditorListener(); activePage.addPartListener(listen... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/c66e1abc548299095f0992ffd278426ba0fc3203/MylarTaskEditor.java/clean/org.eclipse.mylyn.tasks.ui/src/org/eclipse/mylyn/tasklist/ui/MylarTaskEditor.java | [
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getBounds(); | Rectangle getBounds(); | getBounds(); | 47947 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47947/3865f3b02ec80f548b6118000220225af62c866d/Shape.java/buggy/java/awt/Shape.java | [
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if (jj_3R_288()) return true; Token xsp; while (true) { xsp = jj_scanpos; if (jj_3R_323()) { jj_scanpos = xsp; break; } } | if (jj_scan_token(EQ)) return true; | final private boolean jj_3R_283() { if (jj_3R_288()) return true; Token xsp; while (true) { xsp = jj_scanpos; if (jj_3R_323()) { jj_scanpos = xsp; break; } } return false; } | 41673 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/41673/a180e9b19197c7613f1e73c6ec8a574a17011e5e/JavaParser.java/clean/pmd/src/net/sourceforge/pmd/ast/JavaParser.java | [
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return sessions.size(); | synchronized (sessions) { return sessions.size(); } | public static int numSessions() { return sessions.size(); } | 52526 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52526/0b33d8d694f45067a21706b035ee0f75b956f305/Session.java/buggy/core/src/main/java/quickfix/Session.java | [
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try { if (callNode != null) { | try { if (callNode != null) { | public RubyObject call(Ruby ruby, RubyObject recv, String id, RubyPointer args, boolean noSuper) { if (args == null) { args = new RubyPointer(); } CRefNode savedCref = null; // +++ = null; List valueList = null; ruby.getScope().push(); CRefNode lRefValue = getRefValue(); if (lRefValue != null) { saved... | 47134 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47134/7798138390a306a202dcec9bde45928dae2e852e/ScopeNode.java/buggy/org/jruby/nodes/ScopeNode.java | [
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final ErrorInfo errorInfo = new ErrorInfo(prop == null ? null : prop.getName(), errorMessage, | final ErrorInfo errorInfo = new ErrorInfo(myComponent, prop == null ? null : prop.getName(), errorMessage, | public void addError(final String inspectionId, @Nullable IProperty prop, @NotNull String errorMessage, @Nullable EditorQuickFixProvider editorQuickFixProvider) { if (myResults == null) { myResults = new ArrayList<ErrorInfo>(); } QuickFix... | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/6a384c23ca74b732817b78c9169186710a7d1d75/FormEditorErrorCollector.java/clean/ui-designer/impl/com/intellij/uiDesigner/inspections/FormEditorErrorCollector.java | [
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Logger.trace("Troll::Troll","D","Created Troll: "+this.toString()); | logger.debug("Created Troll: "+this); | public Troll() throws AttributeNotFoundException { super(); put("class","troll"); put("x",0); put("y",0); setATK(ATK); setDEF(DEF); setXP(XP); setbaseHP(HP); setLevel(Level.getLevel(getXP())); stop(); Logger.trace("Troll::Troll","D","Created Troll: "+this.toString()); } | 4438 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4438/5032255cbc6322ed19134d0417d2ef3bbb056e19/Troll.java/buggy/src/games/stendhal/server/entity/creature/Troll.java | [
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backupFolderText = new Text(group, SWT.BORDER); | backupFolderText = new Text(topGroup, SWT.BORDER); | private void createTaskBackupScheduleGroup(Composite container) { Group group = new Group(container, SWT.SHADOW_ETCHED_IN); group.setText(GROUP_LABEL_BACKUP); group.setLayout(new GridLayout(3, false)); group.setLayoutData(new GridData(GridData.FILL_HORIZONTAL)); Composite backupTop = new Composite(group, SWT.NONE... | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/89db1d12a45ab2b6e8abf850c2019acf847a3786/MylarTaskListPreferencePage.java/buggy/org.eclipse.mylyn.tasks.ui/src/org/eclipse/mylyn/internal/tasklist/ui/preferences/MylarTaskListPreferencePage.java | [
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_loop129: | _loop635: | public final void relativePathExpr() throws RecognitionException, TokenStreamException { returnAST = null; ASTPair currentAST = new ASTPair(); AST relativePathExpr_AST = null; stepExpr(); astFactory.addASTChild(currentAST, returnAST); { _loop129: do { if ((LA(1)==SLASH||LA(1)==DSLASH)) { { switch (... | 2909 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2909/78bd70965f202738e2ca56dacfd71f5d58c0db69/XPathParser2.java/buggy/src/org/exist/parser/XPathParser2.java | [
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case TokenStream.ELEMDEC : rhs = stack[stackTop]; | } case TokenStream.ELEMDEC : { Object rhs = stack[stackTop]; | public static Object interpret(Context cx, Scriptable scope, Scriptable thisObj, Object[] args, NativeFunction fnOrScript, InterpreterData theData) throws JavaScriptException { if (cx.interpreterSe... | 19000 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19000/7ab2eb958bc5d5b8575262b37554c7e600ccf6e9/Interpreter.java/buggy/src/org/mozilla/javascript/Interpreter.java | [
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this.m_Quiet=quiet; | this.m_Quiet = quiet; | public final void setQuiet (boolean quiet) { this.m_Quiet=quiet; } | 17033 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17033/0dab862ee09d706c3f373fc18bedbf17caf427b9/MSVSSCREATE.java/buggy/src/main/org/apache/tools/ant/taskdefs/optional/vss/MSVSSCREATE.java | [
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if (superClass != null) { return superClass.getOSList(); | if (getSuperClass() != null) { return getSuperClass().getOSList(); | public String[] getOSList() { if (osList == null) { // Ask superClass for its list if (superClass != null) { return superClass.getOSList(); } else { // I have no superClass and no defined filter list return new String[] {"all"}; //$NON-NLS-1$ } } return (String[]) osList.toArray(new String[osList.s... | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/0119b876950a205bdddabaad5e05a45b2a4dc387/ToolChain.java/buggy/build/org.eclipse.cdt.managedbuilder.core/src/org/eclipse/cdt/managedbuilder/internal/core/ToolChain.java | [
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for (; list != null && i < ((RubyArray)val).getLength(); i++) { ((AssignableNode)list.getHeadNode()).assign(ruby, self, ((RubyArray)val).entry(i), check); | for (; list != null && i < ((RubyArray) val).getLength(); i++) { ((AssignableNode) list.getHeadNode()).assign(ruby, self, ((RubyArray) val).entry(i), check); | public RubyObject massign(Ruby ruby, RubyObject self, RubyObject val, boolean check) { if (val == null) { val = RubyArray.newArray(ruby); } else if (!(val instanceof RubyArray)) { // if ( rb_respond_to( val, to_ary ) ) { // val.funcall(getRuby().intern("to_a")); ... | 49687 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49687/8140cac1b7c2375c549787852e38fa6c52b199df/MAsgnNode.java/buggy/org/jruby/nodes/MAsgnNode.java | [
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public static void main(String[] args) { try { verbosity = Integer.parseInt(System.getProperty(VERBOSITY_PROP, VERBOSITY_DEFAULT)); } catch (Exception ignored) { } version = readVersion(); bootText = "Knopflerfish OSGi framework, version " + version + "\n" + "Copyright 2003-2005 ... | 13251 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13251/17ae88b3f7b2b6dd3c0f3c451b2a40ec7c30404f/Main.java/buggy/osgi/framework/src/org/knopflerfish/framework/Main.java | [
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try { position++; bCodeStream[classFileOffset++] = OPC_ishr; } catch (IndexOutOfBoundsException e) { resizeByteArray(OPC_ishr); | if (classFileOffset >= bCodeStream.length) { resizeByteArray(); | final public void ishr() { if (DEBUG) System.out.println(position + "\t\tishr"); //$NON-NLS-1$ countLabels = 0; stackDepth--; try { position++; bCodeStream[classFileOffset++] = OPC_ishr; } catch (IndexOutOfBoundsException e) { resizeByteArray(OPC_ishr); }} | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/3a562aaf09f9f323b583086b80b4683378886606/CodeStream.java/buggy/org.eclipse.jdt.core/compiler/org/eclipse/jdt/internal/compiler/codegen/CodeStream.java | [
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persp.removeFastViewHack(ref); | persp.removeFastView(ref, false); | public void setTrimState(int newTrimState) { if (newTrimState == getTrimState()) return; // Remember the new state int oldTrimState = getTrimState(); // set the new one super.setTrimState(newTrimState); WorkbenchWindow wbw = (WorkbenchWindow) getWorkbenchWindow(); if (wbw == null) ... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/0d98e0705c30cdb00b452b4fac8f914fa706e643/ViewStack.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/ViewStack.java | [
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asUnsignedByte(code[handled-2]) << 8 | asUnsignedByte(code[handled-1]); | getUnsignedShort(code,handled-2); if (DEBUG) System.out.println("offset before = " + offsetBefore); | public void visit(Code obj) { CodeException [] exp = obj.getExceptionTable(); if (exp == null) return; byte [] code = obj.getCode(); for(int i = 0; i < exp.length; i++) { int handled = exp[i].getHandlerPC(); int start = exp[i].getStartPC(); int end = exp[i].getEndPC(); int cause = exp[i].getCatchType(); ... | 10715 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10715/a77320a7b4a7a5046f31488586fb3e21748ced69/DroppedException.java/buggy/findbugs/src/java/edu/umd/cs/findbugs/detect/DroppedException.java | [
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protected abstract void sendNotifcations( ); | protected abstract void sendNotifcations( boolean transactionStarted ); | protected abstract void sendNotifcations( ); | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/41b899c36b1386d90a6f328413dee35f0ae93e5e/ActivityRecord.java/buggy/model/org.eclipse.birt.report.model/src/org/eclipse/birt/report/model/activity/ActivityRecord.java | [
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toggle( saHighlighted.getShape( ) ); saHighlighted = null; bFound = false; | public void mouseMoved( MouseEvent e ) { final Point p = e.getPoint( ); // 1. CHECK FOR MOUSE-CLICK TRIGGERS List al = getActionsForConditions( new TriggerCondition[]{ TriggerCondition.MOUSE_CLICK_LITERAL, TriggerCondition.ONCLICK_LITERAL } ); if ( al != null ) { ShapedAction sa; Shape sh; // POLL EA... | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/11599909231737b3f7f4a772c392835d2f7852d4/SwingEventHandler.java/clean/chart/org.eclipse.birt.chart.device.extension/src/org/eclipse/birt/chart/device/swing/SwingEventHandler.java | [
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tableCaption( "Declared Dependencies" ); | tableCaption( "The following is a list of dependencies for this project. These dependencies " + "are required to compile and run the application:" ); | public void renderBody() { startSection( getTitle() ); startTable(); tableCaption( "Declared Dependencies" ); tableHeader( new String[]{"GroupId", "ArtifactId", "Version"} ); for ( Iterator i = model.getDependencies().iterator(); i.hasNext(); ) ... | 47160 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47160/f3fa32eebe285e13a42c344d73a4af2d4651cae6/DependenciesReport.java/buggy/sandbox/maven-reports/maven-project-info-reports-plugin/src/main/java/org/apache/maven/report/projectinfo/DependenciesReport.java | [
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int setSize = theSet.size(); | System.err.println(" evaluateSetNumber() " ); int setSize = theSet.size(); | protected Object evaluateSetNumber(List theSet, Number theNum, boolean reverse, Navigator nav) { int setSize = theSet.size(); Comparable setElement = null; for ( int i = 0 ... | 47970 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47970/7d145599ef4cb3d572d68f0cfc5dd88eb2bac5cf/DefaultLessThanExpr.java/clean/src/java/main/org/jaxen/expr/DefaultLessThanExpr.java | [
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FeeBO periodicFee = TestObjectFactory.createPeriodicAmountFee("Periodic Fee", FeeCategory.LOAN, "100", MeetingFrequency.MONTHLY, Short .valueOf("1")); | FeeBO periodicFee = TestObjectFactory.createPeriodicAmountFee( "Periodic Fee", FeeCategory.LOAN, "100", MeetingFrequency.MONTHLY, Short.valueOf("1")); | public void testDisburseLoanWithAllTypeOfFees() throws NumberFormatException, InvalidUserException, PropertyNotFoundException, SystemException, ApplicationException { Short dayOfMonth = (short)1; MeetingBO meeting = TestObjectFactory.getMeetingHelper(2,2,4); meeting.setMeetingStartDate(Calendar.getInstance()); mee... | 45468 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45468/8b7a0cdb79f363f8ac3f82d8f06e16d5166a08ed/TestLoanBO.java/clean/mifos/test/org/mifos/application/accounts/loan/business/TestLoanBO.java | [
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return processSocket(socket,false); | try { if (executor == null) { getWorkerThread().assign(socket); } else { executor.execute(new SocketProcessor(socket)); } } catch (Throwable t) { log.error(sm.getString("endpoint.process.fail"), t); return false; } return true; | protected boolean processSocket(SocketChannel socket) { return processSocket(socket,false); } | 46196 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46196/b85225634e2e33292e552e0f63256b46e6684cdc/NioEndpoint.java/buggy/java/org/apache/tomcat/util/net/NioEndpoint.java | [
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new CompLister(output, ucd, 4).print(); | new CompLister(output, 4).print(); | public static void generateCompExclusions(String version) throws IOException { PrintWriter output = Utility.openPrintWriter("DerivedData/CompositionExclusions" + getFileSuffix(true)); generateBat("DerivedData/", "CompositionExclusions", getFileSuffix(true)); output.println("# Compositio... | 5620 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5620/a903b84867c303be450a264f036e46ffde646df7/GenerateData.java/clean/tools/unicodetools/com/ibm/text/UCD/GenerateData.java | [
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release(); | public int doEndTag() throws JspException { // Check role if(role != null && !((HttpServletRequest)pageContext.getRequest()).isUserInRole(role) ) { return EVAL_PAGE; } // end if // Get context ComponentContext compContext = (ComponentContext)pageContext.getAttribute( ComponentConstants... | 48068 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48068/9b2ad740df563248054f1b3b061889d78c8cbf19/GetAttributeTag.java/buggy/src/share/org/apache/struts/taglib/tiles/GetAttributeTag.java | [
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FTPFileEntryParser parser) | FTPFileEntryParser parser, String encoding) | public static FTPFileList create(InputStream stream, FTPFileEntryParser parser) throws IOException { FTPFileList list = new FTPFileList(parser); list.readStream(stream); parser.preParse(list.lines); return list; } | 50121 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50121/69e6aa7bc544094738945fe169700afe768db853/FTPFileList.java/buggy/src/java/org/apache/commons/net/ftp/FTPFileList.java | [
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{ JFileChooser fileChooser = new JFileChooser(XmlFile.prefsDir()); int retVal = fileChooser.showOpenDialog(null); if (retVal != JFileChooser.APPROVE_OPTION) { return; } if (ThrottleFrameManager.instance().getThrottleFrames().hasNext()) { Object[] possibleValues = {"Merge", "Replace", "Cancel"}; int selectedValue = J... | { JFileChooser fileChooser = new JFileChooser(XmlFile.prefsDir()); int retVal = fileChooser.showOpenDialog(null); if (retVal != JFileChooser.APPROVE_OPTION) { return; } if (ThrottleFrameManager.instance().getThrottleFrames().hasNext()) { Object[] possibleValues = {"Merge", "Replace", "Cancel"}; int selectedValue = J... | public void actionPerformed(ActionEvent e) { JFileChooser fileChooser = new JFileChooser(XmlFile.prefsDir()); int retVal = fileChooser.showOpenDialog(null); if (retVal != JFileChooser.APPROVE_OPTION) { return; // give up if no file selected } // if exising frames are open ask to destroy those or merge. if (... | 213 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/213/7824e5694ccf4add1e9e632b280368f5b6f70447/LoadXmlThrottleAction.java/clean/jmri/jmrit/throttle/LoadXmlThrottleAction.java | [
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public void accept(NodeVisitor iVisitor) { iVisitor.visitDefinedNode(this); } | public void accept(NodeVisitor iVisitor) { iVisitor.visitDefinedNode(this); } | public void accept(NodeVisitor iVisitor) { iVisitor.visitDefinedNode(this); } | 52337 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52337/6f48980923c4b06bac2890165c858310895f9a14/DefinedNode.java/buggy/org/jruby/nodes/DefinedNode.java | [
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this.groupCalculationUtil.getResultSetCache( ) ); | this.groupCalculationUtil.getResultSetCache( ).getCount( ) ); | private GroupBoundaryInfo getGroupBoundaryInfo( int groupLevel, int groupIndex ) throws DataException { // j is the group index, is 0-based int startIdx = GroupUtil.getGroupFirstRowIndex( groupLevel, groupIndex, groups, this.groupCalculationUtil.getResultSetCache( ) ); int endIdx = this.groupCalculationU... | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/5ec5d7f41b491569b61310c9e9a0a719aa271a7c/GroupInformationUtil.java/buggy/data/org.eclipse.birt.data/src/org/eclipse/birt/data/engine/executor/transform/group/GroupInformationUtil.java | [
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classFile.add(ByteCode.GETSTATIC, classFile.fullyQualifiedForm(this.name), constantName, constantType); | classFile.add( ByteCode.GETSTATIC, classFile.fullyQualifiedForm(generatedClassName), constantName, constantType); | private void visitLiteral(Node node) { if (node.getType() == TokenStream.STRING) { // just load the string constant push(node.getString()); } else { double num = node.getDouble(); if (node.getIntProp(Node.ISNUMBER_PROP, -1) != -1) { push(num);... | 47345 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47345/e741d0cb339d08bcfa9cb588bcb30951ac0436be/Codegen.java/buggy/src/org/mozilla/javascript/optimizer/Codegen.java | [
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s.checkWrite(safeCanonicalPath()); | s.checkWrite(sname); s.checkWrite(dname); | public boolean renameTo (File dest) { SecurityManager s = System.getSecurityManager(); if (s != null) { // FIXME: JCL doesn't specify which path to check. We check the // source since we can canonicalize it. s.checkWrite(safeCanonicalPath()); } return performRenameTo (dest); } | 1043 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1043/13487a5ef4e62b2ad9a1836e7826c648d61b26b3/File.java/clean/libjava/java/io/File.java | [
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for (int i=0;i<attributes.length;i++) if (missing[i]) | for (int i=0;i<attributes.length;i++) { if (missing[i]) { | public int hashCode() { int hv = 0; if (key != -999) return key; for (int i=0;i<attributes.length;i++) if (missing[i]) hv += (i*13); else hv += (i * 5 * (attributes[i]+1)); if (key == -999) key = hv; return hv; } | 6866 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6866/f6f62667723170f4030ae82f079e537cd6065be3/DecisionTable.java/clean/classifiers/DecisionTable.java | [
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match(input,25,FOLLOW_25_in_curly_chunk2149); | match(input,25,FOLLOW_25_in_curly_chunk2152); | public String curly_chunk() throws RecognitionException { String text; Token any=null; String c = null; text = null; try { // C:\Projects\jboss-rules-new\drools-compiler\src\main\resources\org\drools\lang\drl.g:747:17: ( ( options {greedy=false; } ... | 5490 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5490/bf3305a89ef5e916acbab744c38aaaec83bf67ff/RuleParser.java/clean/drools-compiler/src/main/java/org/drools/lang/RuleParser.java | [
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if (!fEntityScanner.skipString(fElementQName.rawname)) { reportFatalError("ETagRequired", new Object[]{fElementQName.rawname}); } | if (!fEntityScanner.skipString(fElementQName.rawname)) { reportFatalError( "ETagRequired", new Object[] { fElementQName.rawname }); } | protected int scanEndElement() throws IOException, XNIException { if (DEBUG_CONTENT_SCANNING) System.out.println(">>> scanEndElement()"); // pop context fElementStack.popElement(fElementQName) ; // Take advantage of the fact that next string _should_ be "fElementQName.rawName", //In scanners most of the time is c... | 4434 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4434/d954abe66b7b1e4cc31b4a4cd05201210fc8aa4a/XML11NSDocumentScannerImpl.java/buggy/src/org/apache/xerces/impl/XML11NSDocumentScannerImpl.java | [
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ITask cat = new Task(MylarTasksPlugin.getTaskListManager().genUniqueTaskId(), "Testing Category"); t.addRootTask(cat); | Category cat = new Category("Testing Category"); t.addCategory(cat); | public void testLocalBugUnqual() throws InterruptedException { lists.clear(); String bugPrefix = "Bugzilla-"; TaskList t = MylarTasksPlugin.getTaskListManager().createNewTaskList(); MylarTasksPlugin.getTaskListManager().setTaskList(t); ITask cat = new Task(MylarTasksPlugin.getTaskListManager().genUniqueTaskId()... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/bfd6c75025dd41ab813783fc0743c23cfe1c2fc2/BugzillaSearchPluginTest.java/buggy/org.eclipse.mylyn.tasks.tests/src/org/eclipse/mylyn/tasks/bugzilla/tests/BugzillaSearchPluginTest.java | [
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if ( !seenPlatforms.contains( platform.getGeoAccession() ) ) { results.add( convertPlatform( platform ) ); seenPlatforms.add( platform.getGeoAccession() ); } | if ( seenPlatforms.containsKey( platform.getGeoAccession() ) ) continue; log.info( "Converting " + platform ); ArrayDesign arrayDesign = convertPlatform( platform ); results.add( arrayDesign ); seenPlatforms.put( platform.getGeoAccession(), arrayDesign ); bioAssay.getArrayDesignsUsed().add( arrayDesign ); | private BioAssay convertSample( GeoSample sample ) { if ( sample == null ) { log.warn( "Null sample" ); return null; } if ( sample.getGeoAccession() == null || sample.getGeoAccession().length() == 0 ) { log.error( "No GEO accession for sample" ); retu... | 4335 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4335/f3cb7f2e3dc2f5ea976d99e3c05701036375abee/GeoConverter.java/clean/src/impl/edu/columbia/gemma/loader/expression/geo/GeoConverter.java | [
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action.execute(myObject); | action.execute(object); | public void execute(boolean disposeTree, ObjectTreeAction action) { if (myTree.getExecutedObjects().contains(this)) { return; } myTree.getExecutedObjects().add(this); if (myChildren != null) { final ObjectNode[] children = myChildren.toArray(new ObjectNode[myChildren.size()]); for (int i = ... | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/a1b18024366443cdf2c460037633a1ceb1550e67/ObjectNode.java/buggy/util/src/com/intellij/openapi/util/objectTree/ObjectNode.java | [
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protected void substituteScaffoldingCells(Scaffolding scaffolding, Map guidanceMap, Map formsMap, Map styleMap) { | protected void substituteScaffoldingCells(Scaffolding scaffolding, Map guidanceMap, Map formsMap, Map styleMap, String siteId) { | protected void substituteScaffoldingCells(Scaffolding scaffolding, Map guidanceMap, Map formsMap, Map styleMap) { Set sCells = new HashSet(); for (Iterator iter=scaffolding.getScaffoldingCells().iterator(); iter.hasNext();) { ScaffoldingCell scaffoldingCell = (ScaffoldingCell) iter.next(); ... | 48996 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48996/53ab13f925a26749a55d16e2689ed7ba5d5bcc81/HibernateMatrixManagerImpl.java/buggy/matrix/api-impl/src/java/org/theospi/portfolio/matrix/HibernateMatrixManagerImpl.java | [
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gComponent2.translate((size.width - pref.width) / 2, (size.height - pref.height) / 2); | if (!(markersLoaded)){ gComponent2.translate((size.width - pref.width) / 2, (size.height - pref.height) / 2); } else { gComponent2.translate((size.width - pref.width) / 2, 0); } | public void paintComponent(Graphics gComponent){ Dimension size = getSize(); Dimension pref = getPreferredSize(); if (!(alreadyPainted)){ buffIm = new BufferedImage(pref.width, pref.height, BufferedImage.TYPE_3BYTE_BGR); Graphics g = buffIm.getGraphics(); FontMe... | 51222 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51222/8f959eea66c2edcdec22156a5c7a5138f0f3baa3/DPrimeDisplay.java/clean/edu/mit/wi/haploview/DPrimeDisplay.java | [
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protected void parseConfigVars( HttpServletRequest request, List parameterList ) { this.configMap = new HashMap( ); // get report config filename String reportConfigName = ParameterAccessor .getConfigFileName( this.reportDesignName ); if ( reportConfigName == null ) return; // Generate the session handle ... | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/e67b6a4506a01d4fbb741a982d76ef6cb9dba851/ViewerAttributeBean.java/clean/viewer/org.eclipse.birt.report.viewer/birt/WEB-INF/classes/org/eclipse/birt/report/context/ViewerAttributeBean.java | [
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private JavacGJCompiler() { | protected JavacGJCompiler() { | private JavacGJCompiler() { } | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/ed15f1e3933f222801a436b129bc84e5a740d057/JavacGJCompiler.java/buggy/drjava/src/edu/rice/cs/drjava/model/compiler/JavacGJCompiler.java | [
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public List getCurrentlyExecutingJobs() throws SchedulerException; | List getCurrentlyExecutingJobs() throws SchedulerException; | public List getCurrentlyExecutingJobs() throws SchedulerException; | 55677 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55677/cf7f5f77ce5bb6364145230d302b86f1cdadea88/Scheduler.java/clean/src/java/org/quartz/Scheduler.java | [
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ruby.getBlock().pop(); | ruby.getBlockStack().pop(); | public void visitIterNode(IterNode iVisited) { ruby.getBlock().push(iVisited.getVarNode(), new EvaluateMethod(iVisited.getBodyNode()), self.toRubyObject()); ruby.getIterStack().push(Iter.ITER_PRE); try { while (true) { try { result = eval(iVisited.ge... | 49476 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49476/8db42974495981011f558bcce15e2dfc28681a76/EvaluateVisitor.java/clean/org/jruby/evaluator/EvaluateVisitor.java | [
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runtime.defineGlobalConstant("ENV", RubyHash.newHash(runtime, envs, null)); | runtime.defineGlobalConstant("ENV", RubyHash.newHash(runtime, envs, runtime.getNil())); | public static void createGlobals(IRuby runtime) { // Version information: IRubyObject version = runtime.newString(Constants.RUBY_VERSION).freeze(); IRubyObject release = runtime.newString(Constants.COMPILE_DATE).freeze(); IRubyObject platform = runtime.newString(Constants.PLATFORM).freez... | 47273 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47273/ebc655285fa55c939b42b33be335d9f4b2040047/RubyGlobal.java/clean/src/org/jruby/RubyGlobal.java | [
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position = position + currentSymbol.length(); } else { throw new InvalidSmilesException(message); | position = position + currentSymbol.length() + 2; } else if (mychar == '/' || mychar == '\\') { logger.warn("Ignoring stereo information for double bond"); position++; } else if (mychar == '@') { if (position < smiles.length()-1 && smiles.charAt(position+1) == '@') { position++; } logger.warn("Ignoring stereo informati... | public Molecule parseSmiles(String smiles) throws InvalidSmilesException { Bond bond = null; boolean aromaticAtom = false; nodeCounter = 0; bondStatus = 0; thisRing = -1; currentSymbol = null; molecule = new Molecule(); position = 0; // we don't want more than 1024 rings rings = new Atom[1024]; ringbonds = ... | 1306 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1306/27650f91da1f3d9711317f9d0b01d22f259a5ae8/SmilesParser.java/clean/src/org/openscience/cdk/smiles/SmilesParser.java | [
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PointSet.setAttrImp(nodeLock, vertexAttributes, dls, dls.getListLength() != vertexAttributes.getListLength()); | startWriter(); try { PointSet.setAttrImp(vertexAttributes, dls, dls.getListLength() != vertexAttributes.getListLength()); | public void setVertexAttributes(DataListSet dls) { PointSet.setAttrImp(nodeLock, vertexAttributes, dls, dls.getListLength() != vertexAttributes.getListLength()); fireGeometryChanged(dls.storedAttributes(), null, null, null); } | 25560 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/25560/7acbd60d07777835349ce98e64cfb84c95cd0ac1/IndexedFaceSet.java/buggy/src-proxies/de/jreality/scene/proxy/scene/IndexedFaceSet.java | [
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itemPropertyDescriptors.add (createItemPropertyDescriptor (((ComposeableAdapterFactory)adapterFactory).getRootAdapterFactory(), getResourceLocator(), getString("_UI_LineStyle_lineColor_feature"), getString("_UI_PropertyDescriptor_description", "_UI_LineStyle_lineColor_feature", "_UI_LineStyle_type"), NotationPackage.eI... | itemPropertyDescriptors.add (createItemPropertyDescriptor (((ComposeableAdapterFactory)adapterFactory).getRootAdapterFactory(), getResourceLocator(), getString("_UI_LineStyle_lineColor_feature"), getString("_UI_PropertyDescriptor_description", "_UI_LineStyle_lineColor_feature", "_UI_LineStyle_type"), NotationPackage.Li... | protected void addLineColorPropertyDescriptor(Object object) { itemPropertyDescriptors.add (createItemPropertyDescriptor (((ComposeableAdapterFactory)adapterFactory).getRootAdapterFactory(), getResourceLocator(), getString("_UI_LineStyle_lineColor_feature"), //$NON-NLS-1$ getString("_UI_PropertyDescr... | 1758 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1758/1d1e28c0f7853dd16bd3fe819770773ed4e61d20/ShapeStyleItemProvider.java/buggy/org.eclipse.gmf.notation/plugins/org.eclipse.gmf.runtime.notation.edit/src/org/eclipse/gmf/runtime/notation/provider/ShapeStyleItemProvider.java | [
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context.preDefMethodInternalCall(implementationClass, recv, name, args, noSuper); | context.preDefMethodInternalCall(recv, name, args, noSuper, cref); | public void preMethod(IRuby runtime, RubyModule implementationClass, IRubyObject recv, String name, IRubyObject[] args, boolean noSuper) { ThreadContext context = runtime.getCurrentContext(); context.preDefMethodInternalCall(implementationClass, recv, name, args, noSuper); } | 45827 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45827/a1b8fc1d456e3d5c6e01579b88773383068aa85c/DefaultMethod.java/clean/src/org/jruby/internal/runtime/methods/DefaultMethod.java | [
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public static File rotate(String filename, int angle, boolean flip, boolean resetExifOrientation) { File r = null; if (!GalleryFileFilter.canManipulateJpeg(filename)) { Log.log(Log.LEVEL_TRACE, MODULE, "jpegtran doesn't support rotating anything but jpeg"); return new File(filename); } if (useJpegtran) { Fil... | 9402 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9402/5eaee01c449188cf087fc4850700732caebcd03f/ImageUtils.java/clean/com/gallery/GalleryRemote/util/ImageUtils.java | [
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null, "setDynamicJavascript"); | null, "setDynamicJavascriptExpr"); | public PropertyDescriptor[] getPropertyDescriptors() { PropertyDescriptor[] result = new PropertyDescriptor[8]; try { result[0] = new PropertyDescriptor("cdata", ELJavascriptValidatorTag.class, ... | 54704 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54704/db064e19656421b94aaf753550935d95f44bd5f9/ELJavascriptValidatorTagBeanInfo.java/clean/contrib/struts-el/src/share/org/apache/strutsel/taglib/html/ELJavascriptValidatorTagBeanInfo.java | [
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public void setBankNum (int bankNum) { try { PatchEdit.MidiOut.writeShortMessage (port,(byte)(0xB0+(channel-1)),(byte)0x00,(byte)(bankNum/128)); PatchEdit.MidiOut.writeShortMessage (port,(byte)(0xB0+(channel-1)),(byte)0x20,(byte)(bankNum%128)); } catch (Exception e) {}; | public void setBankNum(int bankNum) { try { PatchEdit.MidiOut.writeShortMessage(port, (byte) (0xB0 + (channel - 1)), (byte) 0x00, (byte) (bankNum / 128)); PatchEdit.MidiOut.writeShortMessage(port, (byte) (0xB0 + (channel - 1)), (byte) 0x20, (byte) (bankNum % 128)); } catch (Exception e) { | public void setBankNum (int bankNum) { try { PatchEdit.MidiOut.writeShortMessage (port,(byte)(0xB0+(channel-1)),(byte)0x00,(byte)(bankNum/128)); PatchEdit.MidiOut.writeShortMessage (port,(byte)(0xB0+(channel-1)),(byte)0x20,(byte)(bankNum%128)); } catch (Exception e) ... | 7591 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7591/e7311a9aa2ac478953975abaa1c0c14e8201c062/Driver.java/clean/JSynthLib/core/Driver.java | [
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ObjectReference target = ObjectModel.getReferenceWhenCopiedTo(current, allocCursor); | ObjectReference target = ObjectModel.getReferenceWhenCopiedTo( current, allocCursor); | public void calculateForwardingPointers() { /* Has this allocator ever allocated anything? */ if (initialRegion.isZero()) return; /* Loop through active regions or until the last region */ Address start = initialRegion; Address allocStart = initialRegion; Address allocDataEnd = initialRegion.plus(DA... | 4011 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4011/30524c62fa391922d51289c03075f714c772951c/MarkCompactLocal.java/buggy/MMTk/src/org/mmtk/policy/MarkCompactLocal.java | [
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switch ( value.charAt(value.length()-1) ) { case '1': requestSelection = true; ++eventCount; break; case '0': requestSelection = false; ++eventCount; break; | switch (value.charAt(value.length() - 1)) { case '1': requestSelection = true; ++eventCount; break; case '0': requestSelection = false; ++eventCount; break; | public void processLowLevelEvent(String action, String[] values) { boolean requestSelection = isSelected(); int eventCount = 0; if ( buttonGroup!=null ) { // button group prefix is shared, so maybe more than one value is // delivered in a form for ( ... | 3911 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3911/af8b8aa87eae2661dd36de035cfafa99b9471fea/SAbstractButton.java/clean/wings/src/org/wings/SAbstractButton.java | [
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new NewLocalTaskAction(TaskListView.getFromActivePerspective()).run(); | new NewLocalTaskAction().run(); | public boolean performFinish() { new NewLocalTaskAction(TaskListView.getFromActivePerspective()).run(); return true; } | 51989 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51989/c9209f299a1415c4f78dbf0371a6b6e21881f686/NewLocalTaskWizard.java/clean/org.eclipse.mylyn.tasks.ui/src/org/eclipse/mylyn/internal/tasklist/ui/wizards/NewLocalTaskWizard.java | [
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pmd.processFile( reader, set, ctx ); | try { pmd.processFile( reader, set, ctx ); } catch( PMDException e ) { Fault fault = new Fault( 1, name, e.getMessage() ); list.add( fault ); FaultRegistry.getInstance().registerFault( fault, dataobject ); } | private List checkCookies( List dataobjects ) throws IOException, PMDException { RuleSet set = constructRuleSets(); PMD pmd = new PMD(); ArrayList list = new ArrayList( 100 ); for( int i = 0; i < dataobjects.size(); i++ ) { DataObject dataobject = ( DataObject )dataobjects.get( i ); SourceCookie cookie = ... | 45569 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45569/cc23426f51be96e366323b2fc776e2e1e897f106/RunPMDAction.java/buggy/pmd-netbeans/src/pmd/RunPMDAction.java | [
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page.add(getErrBlock()); | layoutErrorBlock(page); | private void displayReactivateAu(AuProxy au) throws IOException { Page page = newPage(); addJavaScript(page); fetchAuConfig(au); if (plugin == null) { errMsg = "Unknown plugin: " + au.getPluginId() + "<br>Cannot reactivate: " + encodeText(au.getName()); displayAuSummary(); return; } p... | 8150 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8150/eca892806a66cd2b37b1b902e434f580705c4b73/AuConfig.java/buggy/src/org/lockss/servlet/AuConfig.java | [
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try { getDefaultFolder(); return super.getFolder(); } catch (MessagingException e) { e.printStackTrace(); return null; | try { getDefaultFolder(); return super.getFolder(); } catch (MessagingException e) { e.printStackTrace(); return null; } | public Folder getFolder() { try { getDefaultFolder(); return super.getFolder(); } catch (MessagingException e) { e.printStackTrace(); return null; } } | 12376 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12376/b13c667b376deb4a8f2c235ffd847b57616d23c4/ViewedStoreBase.java/buggy/grendel/sources/grendel/view/ViewedStoreBase.java | [
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result.append(ScriptRuntime.toString(elem)); | result.append(s); | private static String toStringHelper(Context cx, Scriptable thisObj, boolean toSource, boolean toLocale) throws JavaScriptException { /* It's probably redundant to handle long lengths in this * function; StringBuffers are limited to 2^31 in java. ... | 51275 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51275/250051383e715d3a12c06e9b723efe99f534b8f7/NativeArray.java/clean/js/rhino/src/org/mozilla/javascript/NativeArray.java | [
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break; | private String setGoAnnotation(Annotation ann, HitInfo hit, String go_id, String goLine) { String go_ann = new String("/GO=\"GOid=GO:"+go_id+ "; with="+hit.getDB()+":"+hit.getAcc()+ "; "+goLine+"\""); String prog = D... | 10874 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10874/9a3ceb36ff986632b2b51521e0e445bcab012831/DataCollectionPane.java/clean/uk/ac/sanger/artemis/editor/DataCollectionPane.java | [
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return IName.EMPTY_NAME_ARRAY; | return IIndexFragmentName.EMPTY_NAME_ARRAY; | public IName[] getReferences(IBinding binding) throws CoreException { if (binding instanceof PDOMBinding) { List names = new ArrayList(); for (PDOMName name = ((PDOMBinding)binding).getFirstReference(); name != null; name = name.getNextInBinding()) names.add(name); return (IName[])names.toArray(new I... | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/f5a4ba1d7638b16bde80c2f1086c78aa03af1f90/PDOM.java/clean/core/org.eclipse.cdt.core/parser/org/eclipse/cdt/internal/core/pdom/PDOM.java | [
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int len = block.length < MAGIC_NUMBER.length ? block.length : | int len = block.length < MAGIC_NUMBER.length ? block.length : | public static boolean isOLE(byte[] block) { if (block == null) return false; int len = block.length < MAGIC_NUMBER.length ? block.length : MAGIC_NUMBER.length; for (int i=0; i<len; i++) if (block[i] != MAGIC_NUMBER[i]) return false; return true; } | 49800 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49800/e1c1aa6cc0c7d00068e668cc26f365c20679cd01/OLEParser.java/buggy/loci/formats/OLEParser.java | [
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TimestampMapping foundM = index.locate(newTS, IndexTimestampSelector.DATA, Lifetime.DISCRETE); | TimestampMapping foundM = index.locate(newTS, IndexTimestampSelector.DATA, Lifetime.DISCRETE); | public static void main(String [] args) { /* * Handle broken pipes properly */ final Signal sigpipe = new Signal("PIPE"); SignalHandler handler = new SignalHandler () { public void handle(Signal sig) { System.exit(sigpipe.hashCode()); } }; Signal.handle(sigpipe, handler); TimeIndexFactory factory = ne... | 8679 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8679/d00ccf8a44ed142be850d3e37f41ba078b1c31d1/TestLoca1.java/clean/timeindexing/uk/ti/TestLoca1.java | [
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if (containEmptyName(ref.tokens)) return; | if (isRecoveredName(ref.tokens)) return; | public void unresolvableReference(NameReference nameRef, Binding binding) {/* also need to check that the searchedType is the receiver type if (binding instanceof ProblemBinding) { ProblemBinding problem = (ProblemBinding) binding; if (problem.searchType != null && problem.searchType.isHierarchyInconsistent()) seve... | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/b62ba1f827cf4ea86ca5f1a1ddb9504a62920662/ProblemReporter.java/buggy/org.eclipse.jdt.core/compiler/org/eclipse/jdt/internal/compiler/problem/ProblemReporter.java | [
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synchronized(this) { | synchronized (this) { | public void run() { synchronized(this) { // Just in case this object is reused in the future finished = false; } final byte[] buf = new byte[SIZE]; int length; try { while ((length = is.read(buf)) > 0) { os.write(buf, 0, length); ... | 506 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/506/c6c232893c39257745a8f7a618bcdb5c59791cae/StreamPumper.java/buggy/src/main/org/apache/tools/ant/taskdefs/StreamPumper.java | [
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return NativeError.make(cx, scope, function, args); | return NativeError.make(cx, scope, f, args); | public Object execMethod(int methodId, IdFunction function, Context cx, Scriptable scope, Scriptable thisObj, Object[] args) throws JavaScriptException { if (scopeSlaveFlag) { switch (methodId) { case Id_decodeURI: ... | 47345 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47345/3526c0f6981dc6716171a07605c6bcc7b6b20cb3/NativeGlobal.java/clean/src/org/mozilla/javascript/NativeGlobal.java | [
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setFeature.invoke(parser, new Object[] {"http: new Boolean(false)}); | setFeature.invoke(parser, new Object[] {"http: new Boolean(true)}); | public Document getDocument(InputStream in, boolean validate) throws IOException { try { // Load the parser class Class parserClass = Class.forName("org.apache.xerces.parsers.DOMParser"); Object parser = parserClass.newInstance(); // Set validation ... | 49530 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49530/ef3703d41e18ab81326beaaaf428320bd2a69ac5/XercesDOMAdapter.java/clean/core/src/java/org/jdom/adapters/XercesDOMAdapter.java | [
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Driver.debug("supportsCatalogsInDataManipulation false"); | if (Driver.logDebug) Driver.debug("supportsCatalogsInDataManipulation false"); | public boolean supportsCatalogsInProcedureCalls() throws SQLException { Driver.debug("supportsCatalogsInDataManipulation false"); return false; } | 45672 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45672/b465f5307f9f5506beb1edbcc0fb56eed7c29c12/DatabaseMetaData.java/clean/src/interfaces/jdbc/org/postgresql/jdbc2/DatabaseMetaData.java | [
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weapon.flags |= F_LASER | F_DIRECT_FIRE; | weapon.flags |= F_LASER | F_DIRECT_FIRE | F_ENERGY; | public static WeaponType createISSmallPulseLaser() { WeaponType weapon = new WeaponType(); weapon.name = "Small Pulse Laser"; weapon.setInternalName("ISSmallPulseLaser"); weapon.addLookupName("IS Pulse Small Laser"); weapon.addLookupName("IS Small Pulse Laser"); weapon.heat... | 4135 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4135/3de8871e6895277c40058c53708655401dda40bd/WeaponType.java/buggy/megamek/src/megamek/common/WeaponType.java | [
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gdc.getSubClasses().add(domainClasses[i]); | if (gdc == null || gdc.getSubClasses()==null) break; gdc.getSubClasses().add(domainClasses[i]); | public static void configureDomainClassRelationships(GrailsDomainClass[] domainClasses, Map domainMap) { // configure super/sub class relationships // and configure how domain class properties reference each other for (int i = 0; i < domainClasses.length; i++) { if(!domainClasses[i].... | 47932 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47932/ff2e3be8ae20a5eff9f130e6b1fcd2b3d11750e7/GrailsDomainConfigurationUtil.java/clean/grails/src/persistence/org/codehaus/groovy/grails/orm/hibernate/cfg/GrailsDomainConfigurationUtil.java | [
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if (helper.needsWriteBarrier()) { final Register tmp = requestRegister(JvmType.INT, false); | if (!inf.isPrimitive() && helper.needsWriteBarrier()) { final Register tmp = L1AHelper.requestRegister(eContext, JvmType.INT, false); | public final void visit_putfield(VmConstFieldRef fieldRef) { fieldRef.resolve(loader); final VmField field = fieldRef.getResolvedVmField(); if (field.isStatic()) { throw new IncompatibleClassChangeError( "getfield called on static field " + fieldRef.getName()); } final VmInstanceField inf = (VmInstanceField... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/7f3f443c80552e30cb144c1a1ce760d89fa35f2b/X86BytecodeVisitor.java/buggy/core/src/core/org/jnode/vm/x86/compiler/l1a/X86BytecodeVisitor.java | [
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case ENCODING_EXTERNAL: case ENCODING_UTF_8: inputEncoding = "UTF-8"; break; case ENCODING_ISO_8859_1: inputEncoding = "ISO-8859-1"; break; case ENCODING_UCS_2_12: inputEncoding = "UTF-16BE"; break; case ENCODING_UCS_2_21: inputEncoding = "UTF-16LE"; break; | handler.warn("expected XML version 1.0, not: " + version); xmlVersion = XML_11; | private String parseXMLDecl (boolean ignoreEncoding) throws SAXException, IOException { String version; String encodingName = null; String standalone = null; int flags = LIT_DISABLE_CREF | LIT_DISABLE_PE | LIT_DISABLE_EREF; String inputEncoding = null; switch (this.encoding) { ... | 1739 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1739/7fb7568e63c3fe14af521de4699cb37898923ca7/XmlParser.java/buggy/libjava/gnu/xml/aelfred2/XmlParser.java | [
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type = col_type; | type = columnType; | public void parseColumnType(String col_type) throws Exception { int start, end; String type, size = null; start = col_type.indexOf('('); end = col_type.indexOf(')'); if (start != -1 && end != -1) { type = col_type.substring(0, start); size = col_type.substrin... | 25465 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/25465/35d86a9c00181d3e1fd4b77dbc3dd0ccbd8fa6cd/Column.java/buggy/opennms-install/src/main/java/org/opennms/install/Column.java | [
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SessionFactory sf = (SessionFactory)getObject(); if(sf != null) { Configuration c = getConfiguration(); if(c instanceof GrailsDomainConfiguration) { GrailsDomainConfiguration gc = (GrailsDomainConfiguration)c; gc.configureDynamicMethods(sf); } | if(this.applicationContext!= null) { GrailsDomainConfigurationUtil.configureDynamicMethods(applicationContext,this.grailsApplication); | public void afterPropertiesSet() throws Exception { ClassLoader originalClassLoader = null; if (this.classLoader != null) { originalClassLoader = Thread.currentThread().getContextClassLoader(); Thread.currentThread().setContextClassLoader(this.classLoader); } super.afterPropertiesSet(); SessionFac... | 53275 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53275/5fb3591a0b45d20963e3a5bee8bd500f45befe8d/ConfigurableLocalSessionFactoryBean.java/buggy/src/persistence/org/codehaus/groovy/grails/orm/hibernate/ConfigurableLocalSessionFactoryBean.java | [
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task1 = new Task(MylarTaskListPlugin.getTaskListManager().genUniqueTaskHandle(), "task 1", true); task2 = new Task(MylarTaskListPlugin.getTaskListManager().genUniqueTaskHandle(), "task 2", true); task3 = new Task(MylarTaskListPlugin.getTaskListManager().genUniqueTaskHandle(), "task 3", true); task4 = new Task(MylarTask... | task1 = new Task(TasksUiPlugin.getTaskListManager().genUniqueTaskHandle(), "task 1", true); task2 = new Task(TasksUiPlugin.getTaskListManager().genUniqueTaskHandle(), "task 2", true); task3 = new Task(TasksUiPlugin.getTaskListManager().genUniqueTaskHandle(), "task 3", true); task4 = new Task(TasksUiPlugin.getTaskListMa... | protected void setUp() throws Exception { super.setUp(); try { MylarTaskListPlugin.getDefault().getWorkbench().getActiveWorkbenchWindow().getActivePage().showView( "org.eclipse.mylar.tasks.ui.views.TaskListView"); } catch (PartInitException e) { // TODO Auto-generated catch block e.printStackTrace(); fa... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/b23efbfef800ff6f85224f036d6a11e9fab7acba/TaskHistoryTest.java/buggy/org.eclipse.mylyn.tasks.tests/src/org/eclipse/mylyn/tasklist/tests/TaskHistoryTest.java | [
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os.writeCALL(initializer); os.setObjectRef(done); | public final void writeClassInitialize(Label curInstrLabel, GPR classReg, VmType< ? > cls) { if (!cls.isInitialized()) { // Create jump labels final Label doInit = new Label(curInstrLabel + "$$do-cinit-ex"); final Label done = new Label(curInstrLabel + "$$done-cini... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/67d1d0f88f78572e33917f59b692475fece9c7d9/X86CompilerHelper.java/clean/core/src/core/org/jnode/vm/x86/compiler/X86CompilerHelper.java | [
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byte[] bytes = cdptargetipaddress.getBytes(); | log.warn(" cdp address is " + cdptargetipaddress); log.warn(" cdp address is " + cdptargetipaddress); String hexDigits = cdptargetipaddress.trim().toLowerCase(); long ipAddr = Long.parseLong(hexDigits, 16); byte[] bytes = new byte[4]; bytes[0] = (byte) (ipAddr & 0xff); bytes[1] = (byte) ((ipAddr >> 8) & 0xff); bytes... | private void storeSnmpCollection(Connection dbConn, Timestamp now) throws SQLException, UnknownHostException { Category log = ThreadCategory.getInstance(getClass()); PreparedStatement stmt = null; ResultSet rs = null; Iterator ite = null; int nodeid = m_node.getNodeId(); if (m_snmpcoll.hasIpNetToMediaTable()) ... | 48885 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48885/626f6afdcec567a4c044af0196f1215ed1878bb2/DbEventWriter.java/buggy/opennms-services/src/main/java/org/opennms/netmgt/linkd/DbEventWriter.java | [
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} return super.getDefaultMonitor(); } | } return super.getDefaultMonitor(); } | public IProgressMonitor getDefaultMonitor() { //only need a default monitor for operations the UI thread //and only if there is a display Display display; if (PlatformUI.isWorkbenchRunning() && !((Workbench)PlatformUI.getWorkbench()).isStarting()) { display = PlatformUI.getWor... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/9f68fc05c49b144eebae1957b15f8f3671c54cac/ProgressManager.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/progress/ProgressManager.java | [
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protected void onPress(InputEvent e, final MyActionButton button) { final AnAction action = new OpenProjectAction(); action.actionPerformed(new AnActionEvent(e, new DataContext() { public Object getData(String dataId) { if (DataConstants.PROJECT.equals(dataId)) { return null; } return button; } }, ActionPlaces.UNKNOWN,... | protected void onPress(InputEvent e) { ProjectUtil.createNewProject(null); | protected void onPress(InputEvent e, final MyActionButton button) { final AnAction action = new OpenProjectAction(); action.actionPerformed(new AnActionEvent(e, new DataContext() { public Object getData(String dataId) { if (DataConstants.PROJECT.equals(dataId)) { ret... | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/057c1fc4eca73d8d659037771b3e5b73e8b81dd3/WelcomeScreen.java/clean/source/com/intellij/openapi/wm/impl/welcomeScreen/WelcomeScreen.java | [
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System.out.println("OBFUSCATOR: ADDING KEEP: " + keep.getClassName() ); | public void addConfiguredKeep( Keep keep ) { if (keep.getClassName() == null) { throw new BuildException("The <keep> element needs to define the attribute [class]. Please check your <obfuscator> setting."); } System.out.println("OBFUSCATOR: ADDING KEEP: " + keep.getClassName() ); this.keeps.add( keep ); } | 9804 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9804/766e8264a4d418a6a6fa7fe9760ddec134c49163/ObfuscatorSetting.java/clean/enough-polish-build/source/src/de/enough/polish/ant/build/ObfuscatorSetting.java | [
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protected void reset() | public boolean reset() | protected void reset() { // Initialize everything for a first/second run. _line = new StringBuffer( 80 ); _text = new StringBuffer( 20 ); _spaces = 0; _thisIndent = _nextIndent = 0; _exception = null; _elementStateCount = 0; _started = false; _dtdWri... | 46079 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46079/1e1ce544975980cfc9bc8941ab7c8166d350c04d/BaseMarkupSerializer.java/buggy/src/org/apache/xml/serialize/BaseMarkupSerializer.java | [
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closeLaunchBar(false); } | closeLaunchBar(false); } | public void run() { closeLaunchBar(false); } | 13822 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13822/1b18c4111a9bdd6d059092d4cb5971693a9544b2/IntroLaunchBar.java/clean/org.eclipse.ui.intro/src/org/eclipse/ui/internal/intro/impl/presentations/IntroLaunchBar.java | [
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f[6] = new Field(connection, "TYPE_NAME", iVarcharOid, NAME_SIZE); | f[6] = new Field(connection, "TYPE_NAME", iVarcharOid, getMaxNameLength()); | public java.sql.ResultSet getProcedureColumns(String catalog, String schemaPattern, String procedureNamePattern, String columnNamePattern) throws SQLException { if (procedureNamePattern == null) procedureNamePattern = "%"; if (columnNamePattern == null) columnNamePattern = "%"; // for now, this returns an empty... | 46563 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46563/7c553901d7ab010ad1cb5bf44f9ca2fdae83909a/AbstractJdbc1DatabaseMetaData.java/clean/src/interfaces/jdbc/org/postgresql/jdbc1/AbstractJdbc1DatabaseMetaData.java | [
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public CachedPoolableObjetFactory(ObjectPool pool, PipelineContext pipelineContext, String staticStateString, String dynamicStateString, Element filesElement) { | public CachedPoolableObjetFactory(ObjectPool pool, String staticStateString, String dynamicStateString) { | public CachedPoolableObjetFactory(ObjectPool pool, PipelineContext pipelineContext, String staticStateString, String dynamicStateString, Element filesElement) { this.pool = pool; this.pipelineContext = pipelineContext; // TODO: this is bad, we should not store the PipelineContext! ... | 54445 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54445/a6eb47de417fd6cf006fa4e9c8c250cb033f744f/XFormsServer.java/clean/src/java/org/orbeon/oxf/xforms/XFormsServer.java | [
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public void update(byte[] input) throws DigestException { update(input, 0, input.length); | public void update(byte input) throws DigestException { byte[] in = { input }; update(in, 0, 1); | public void update(byte[] input) throws DigestException { update(input, 0, input.length); } | 51275 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51275/3634d4d94b208431471fe506f413f97d460c7602/JSSMessageDigest.java/buggy/security/jss/org/mozilla/jss/crypto/JSSMessageDigest.java | [
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return main( args, classWorld ); | int result = main( args, classWorld ); System.exit(result); | public static int main( String[] args ) { ClassWorld classWorld = new ClassWorld( "plexus.core", Thread.currentThread().getContextClassLoader() ); return main( args, classWorld ); } | 50542 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50542/9f8c68e04ac2ef782c441ecef74f79d1cad115ac/MavenCli.java/buggy/maven-cli/src/main/java/org/apache/maven/cli/MavenCli.java | [
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if (title != null) shell.setText(title); if (titleImage != null) shell.setImage(titleImage); | if (title != null) { shell.setText(title); } if (titleImage != null) { shell.setImage(titleImage); } | protected void configureShell(Shell shell) { super.configureShell(shell); if (title != null) shell.setText(title); if (titleImage != null) shell.setImage(titleImage); } | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/391f2606b4ea2c1fb5052d938ca90877ee7631f6/MessageDialog.java/clean/bundles/org.eclipse.jface/src/org/eclipse/jface/dialogs/MessageDialog.java | [
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Adapter (DocumentHandler dh) { docHandler = dh; } | Adapter(DocumentHandler dh) { docHandler = dh; } | Adapter (DocumentHandler dh) { docHandler = dh; } | 27835 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/27835/7fb7568e63c3fe14af521de4699cb37898923ca7/SAXDriver.java/buggy/libjava/gnu/xml/aelfred2/SAXDriver.java | [
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