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1206.6465
Bayesian Efficient Multiple Kernel Learning
cs.LG stat.ML
Multiple kernel learning algorithms are proposed to combine kernels in order to obtain a better similarity measure or to integrate feature representations coming from different data sources. Most of the previous research on such methods is focused on the computational efficiency issue. However, it is still not feasible to combine many kernels using existing Bayesian approaches due to their high time complexity. We propose a fully conjugate Bayesian formulation and derive a deterministic variational approximation, which allows us to combine hundreds or thousands of kernels very efficiently. We briefly explain how the proposed method can be extended for multiclass learning and semi-supervised learning. Experiments with large numbers of kernels on benchmark data sets show that our inference method is quite fast, requiring less than a minute. On one bioinformatics and three image recognition data sets, our method outperforms previously reported results with better generalization performance.
1206.6466
Utilizing Static Analysis and Code Generation to Accelerate Neural Networks
cs.NE cs.MS cs.PL
As datasets continue to grow, neural network (NN) applications are becoming increasingly limited by both the amount of available computational power and the ease of developing high-performance applications. Researchers often must have expert systems knowledge to make their algorithms run efficiently. Although available computing power increases rapidly each year, algorithm efficiency is not able to keep pace due to the use of general purpose compilers, which are not able to fully optimize specialized application domains. Within the domain of NNs, we have the added knowledge that network architecture remains constant during training, meaning the architecture's data structure can be statically optimized by a compiler. In this paper, we present SONNC, a compiler for NNs that utilizes static analysis to generate optimized parallel code. We show that SONNC's use of static optimizations make it able to outperform hand-optimized C++ code by up to 7.8X, and MATLAB code by up to 24X. Additionally, we show that use of SONNC significantly reduces code complexity when using structurally sparse networks.
1206.6467
Semi-Supervised Collective Classification via Hybrid Label Regularization
cs.LG stat.ML
Many classification problems involve data instances that are interlinked with each other, such as webpages connected by hyperlinks. Techniques for "collective classification" (CC) often increase accuracy for such data graphs, but usually require a fully-labeled training graph. In contrast, we examine how to improve the semi-supervised learning of CC models when given only a sparsely-labeled graph, a common situation. We first describe how to use novel combinations of classifiers to exploit the different characteristics of the relational features vs. the non-relational features. We also extend the ideas of "label regularization" to such hybrid classifiers, enabling them to leverage the unlabeled data to bias the learning process. We find that these techniques, which are efficient and easy to implement, significantly increase accuracy on three real datasets. In addition, our results explain conflicting findings from prior related studies.
1206.6468
Variational Inference in Non-negative Factorial Hidden Markov Models for Efficient Audio Source Separation
cs.LG cs.SD stat.ML
The past decade has seen substantial work on the use of non-negative matrix factorization and its probabilistic counterparts for audio source separation. Although able to capture audio spectral structure well, these models neglect the non-stationarity and temporal dynamics that are important properties of audio. The recently proposed non-negative factorial hidden Markov model (N-FHMM) introduces a temporal dimension and improves source separation performance. However, the factorial nature of this model makes the complexity of inference exponential in the number of sound sources. Here, we present a Bayesian variant of the N-FHMM suited to an efficient variational inference algorithm, whose complexity is linear in the number of sound sources. Our algorithm performs comparably to exact inference in the original N-FHMM but is significantly faster. In typical configurations of the N-FHMM, our method achieves around a 30x increase in speed.
1206.6469
Inferring Latent Structure From Mixed Real and Categorical Relational Data
cs.LG stat.ML
We consider analysis of relational data (a matrix), in which the rows correspond to subjects (e.g., people) and the columns correspond to attributes. The elements of the matrix may be a mix of real and categorical. Each subject and attribute is characterized by a latent binary feature vector, and an inferred matrix maps each row-column pair of binary feature vectors to an observed matrix element. The latent binary features of the rows are modeled via a multivariate Gaussian distribution with low-rank covariance matrix, and the Gaussian random variables are mapped to latent binary features via a probit link. The same type construction is applied jointly to the columns. The model infers latent, low-dimensional binary features associated with each row and each column, as well correlation structure between all rows and between all columns.
1206.6470
A Combinatorial Algebraic Approach for the Identifiability of Low-Rank Matrix Completion
cs.LG cs.DM cs.NA stat.ML
In this paper, we review the problem of matrix completion and expose its intimate relations with algebraic geometry, combinatorics and graph theory. We present the first necessary and sufficient combinatorial conditions for matrices of arbitrary rank to be identifiable from a set of matrix entries, yielding theoretical constraints and new algorithms for the problem of matrix completion. We conclude by algorithmically evaluating the tightness of the given conditions and algorithms for practically relevant matrix sizes, showing that the algebraic-combinatoric approach can lead to improvements over state-of-the-art matrix completion methods.
1206.6471
On Causal and Anticausal Learning
cs.LG stat.ML
We consider the problem of function estimation in the case where an underlying causal model can be inferred. This has implications for popular scenarios such as covariate shift, concept drift, transfer learning and semi-supervised learning. We argue that causal knowledge may facilitate some approaches for a given problem, and rule out others. In particular, we formulate a hypothesis for when semi-supervised learning can help, and corroborate it with empirical results.
1206.6472
An Efficient Approach to Sparse Linear Discriminant Analysis
cs.LG stat.ML
We present a novel approach to the formulation and the resolution of sparse Linear Discriminant Analysis (LDA). Our proposal, is based on penalized Optimal Scoring. It has an exact equivalence with penalized LDA, contrary to the multi-class approaches based on the regression of class indicator that have been proposed so far. Sparsity is obtained thanks to a group-Lasso penalty that selects the same features in all discriminant directions. Our experiments demonstrate that this approach generates extremely parsimonious models without compromising prediction performances. Besides prediction, the resulting sparse discriminant directions are also amenable to low-dimensional representations of data. Our algorithm is highly efficient for medium to large number of variables, and is thus particularly well suited to the analysis of gene expression data.
1206.6473
Compositional Planning Using Optimal Option Models
cs.AI cs.LG
In this paper we introduce a framework for option model composition. Option models are temporal abstractions that, like macro-operators in classical planning, jump directly from a start state to an end state. Prior work has focused on constructing option models from primitive actions, by intra-option model learning; or on using option models to construct a value function, by inter-option planning. We present a unified view of intra- and inter-option model learning, based on a major generalisation of the Bellman equation. Our fundamental operation is the recursive composition of option models into other option models. This key idea enables compositional planning over many levels of abstraction. We illustrate our framework using a dynamic programming algorithm that simultaneously constructs optimal option models for multiple subgoals, and also searches over those option models to provide rapid progress towards other subgoals.
1206.6474
Estimation of Simultaneously Sparse and Low Rank Matrices
cs.DS cs.LG cs.NA stat.ML
The paper introduces a penalized matrix estimation procedure aiming at solutions which are sparse and low-rank at the same time. Such structures arise in the context of social networks or protein interactions where underlying graphs have adjacency matrices which are block-diagonal in the appropriate basis. We introduce a convex mixed penalty which involves $\ell_1$-norm and trace norm simultaneously. We obtain an oracle inequality which indicates how the two effects interact according to the nature of the target matrix. We bound generalization error in the link prediction problem. We also develop proximal descent strategies to solve the optimization problem efficiently and evaluate performance on synthetic and real data sets.
1206.6475
A Split-Merge Framework for Comparing Clusterings
cs.LG stat.ML
Clustering evaluation measures are frequently used to evaluate the performance of algorithms. However, most measures are not properly normalized and ignore some information in the inherent structure of clusterings. We model the relation between two clusterings as a bipartite graph and propose a general component-based decomposition formula based on the components of the graph. Most existing measures are examples of this formula. In order to satisfy consistency in the component, we further propose a split-merge framework for comparing clusterings of different data sets. Our framework gives measures that are conditionally normalized, and it can make use of data point information, such as feature vectors and pairwise distances. We use an entropy-based instance of the framework and a coreference resolution data set to demonstrate empirically the utility of our framework over other measures.
1206.6476
Similarity Learning for Provably Accurate Sparse Linear Classification
cs.LG cs.AI stat.ML
In recent years, the crucial importance of metrics in machine learning algorithms has led to an increasing interest for optimizing distance and similarity functions. Most of the state of the art focus on learning Mahalanobis distances (requiring to fulfill a constraint of positive semi-definiteness) for use in a local k-NN algorithm. However, no theoretical link is established between the learned metrics and their performance in classification. In this paper, we make use of the formal framework of good similarities introduced by Balcan et al. to design an algorithm for learning a non PSD linear similarity optimized in a nonlinear feature space, which is then used to build a global linear classifier. We show that our approach has uniform stability and derive a generalization bound on the classification error. Experiments performed on various datasets confirm the effectiveness of our approach compared to state-of-the-art methods and provide evidence that (i) it is fast, (ii) robust to overfitting and (iii) produces very sparse classifiers.
1206.6477
Discovering Support and Affiliated Features from Very High Dimensions
cs.LG stat.ML
In this paper, a novel learning paradigm is presented to automatically identify groups of informative and correlated features from very high dimensions. Specifically, we explicitly incorporate correlation measures as constraints and then propose an efficient embedded feature selection method using recently developed cutting plane strategy. The benefits of the proposed algorithm are two-folds. First, it can identify the optimal discriminative and uncorrelated feature subset to the output labels, denoted here as Support Features, which brings about significant improvements in prediction performance over other state of the art feature selection methods considered in the paper. Second, during the learning process, the underlying group structures of correlated features associated with each support feature, denoted as Affiliated Features, can also be discovered without any additional cost. These affiliated features serve to improve the interpretations on the learning tasks. Extensive empirical studies on both synthetic and very high dimensional real-world datasets verify the validity and efficiency of the proposed method.
1206.6478
Maximum Margin Output Coding
cs.LG stat.ML
In this paper we study output coding for multi-label prediction. For a multi-label output coding to be discriminative, it is important that codewords for different label vectors are significantly different from each other. In the meantime, unlike in traditional coding theory, codewords in output coding are to be predicted from the input, so it is also critical to have a predictable label encoding. To find output codes that are both discriminative and predictable, we first propose a max-margin formulation that naturally captures these two properties. We then convert it to a metric learning formulation, but with an exponentially large number of constraints as commonly encountered in structured prediction problems. Without a label structure for tractable inference, we use overgenerating (i.e., relaxation) techniques combined with the cutting plane method for optimization. In our empirical study, the proposed output coding scheme outperforms a variety of existing multi-label prediction methods for image, text and music classification.
1206.6479
The Landmark Selection Method for Multiple Output Prediction
cs.LG stat.ML
Conditional modeling x \to y is a central problem in machine learning. A substantial research effort is devoted to such modeling when x is high dimensional. We consider, instead, the case of a high dimensional y, where x is either low dimensional or high dimensional. Our approach is based on selecting a small subset y_L of the dimensions of y, and proceed by modeling (i) x \to y_L and (ii) y_L \to y. Composing these two models, we obtain a conditional model x \to y that possesses convenient statistical properties. Multi-label classification and multivariate regression experiments on several datasets show that this model outperforms the one vs. all approach as well as several sophisticated multiple output prediction methods.
1206.6480
A Dantzig Selector Approach to Temporal Difference Learning
cs.LG stat.ML
LSTD is a popular algorithm for value function approximation. Whenever the number of features is larger than the number of samples, it must be paired with some form of regularization. In particular, L1-regularization methods tend to perform feature selection by promoting sparsity, and thus, are well-suited for high-dimensional problems. However, since LSTD is not a simple regression algorithm, but it solves a fixed--point problem, its integration with L1-regularization is not straightforward and might come with some drawbacks (e.g., the P-matrix assumption for LASSO-TD). In this paper, we introduce a novel algorithm obtained by integrating LSTD with the Dantzig Selector. We investigate the performance of the proposed algorithm and its relationship with the existing regularized approaches, and show how it addresses some of their drawbacks.
1206.6481
Cross Language Text Classification via Subspace Co-Regularized Multi-View Learning
cs.CL cs.IR cs.LG
In many multilingual text classification problems, the documents in different languages often share the same set of categories. To reduce the labeling cost of training a classification model for each individual language, it is important to transfer the label knowledge gained from one language to another language by conducting cross language classification. In this paper we develop a novel subspace co-regularized multi-view learning method for cross language text classification. This method is built on parallel corpora produced by machine translation. It jointly minimizes the training error of each classifier in each language while penalizing the distance between the subspace representations of parallel documents. Our empirical study on a large set of cross language text classification tasks shows the proposed method consistently outperforms a number of inductive methods, domain adaptation methods, and multi-view learning methods.
1206.6482
Modeling Images using Transformed Indian Buffet Processes
cs.CV cs.LG stat.ML
Latent feature models are attractive for image modeling, since images generally contain multiple objects. However, many latent feature models ignore that objects can appear at different locations or require pre-segmentation of images. While the transformed Indian buffet process (tIBP) provides a method for modeling transformation-invariant features in unsegmented binary images, its current form is inappropriate for real images because of its computational cost and modeling assumptions. We combine the tIBP with likelihoods appropriate for real images and develop an efficient inference, using the cross-correlation between images and features, that is theoretically and empirically faster than existing inference techniques. Our method discovers reasonable components and achieve effective image reconstruction in natural images.
1206.6483
Subgraph Matching Kernels for Attributed Graphs
cs.LG stat.ML
We propose graph kernels based on subgraph matchings, i.e. structure-preserving bijections between subgraphs. While recently proposed kernels based on common subgraphs (Wale et al., 2008; Shervashidze et al., 2009) in general can not be applied to attributed graphs, our approach allows to rate mappings of subgraphs by a flexible scoring scheme comparing vertex and edge attributes by kernels. We show that subgraph matching kernels generalize several known kernels. To compute the kernel we propose a graph-theoretical algorithm inspired by a classical relation between common subgraphs of two graphs and cliques in their product graph observed by Levi (1973). Encouraging experimental results on a classification task of real-world graphs are presented.
1206.6484
Apprenticeship Learning for Model Parameters of Partially Observable Environments
cs.LG cs.AI stat.ML
We consider apprenticeship learning, i.e., having an agent learn a task by observing an expert demonstrating the task in a partially observable environment when the model of the environment is uncertain. This setting is useful in applications where the explicit modeling of the environment is difficult, such as a dialogue system. We show that we can extract information about the environment model by inferring action selection process behind the demonstration, under the assumption that the expert is choosing optimal actions based on knowledge of the true model of the target environment. Proposed algorithms can achieve more accurate estimates of POMDP parameters and better policies from a short demonstration, compared to methods that learns only from the reaction from the environment.
1206.6485
Greedy Algorithms for Sparse Reinforcement Learning
cs.LG stat.ML
Feature selection and regularization are becoming increasingly prominent tools in the efforts of the reinforcement learning (RL) community to expand the reach and applicability of RL. One approach to the problem of feature selection is to impose a sparsity-inducing form of regularization on the learning method. Recent work on $L_1$ regularization has adapted techniques from the supervised learning literature for use with RL. Another approach that has received renewed attention in the supervised learning community is that of using a simple algorithm that greedily adds new features. Such algorithms have many of the good properties of the $L_1$ regularization methods, while also being extremely efficient and, in some cases, allowing theoretical guarantees on recovery of the true form of a sparse target function from sampled data. This paper considers variants of orthogonal matching pursuit (OMP) applied to reinforcement learning. The resulting algorithms are analyzed and compared experimentally with existing $L_1$ regularized approaches. We demonstrate that perhaps the most natural scenario in which one might hope to achieve sparse recovery fails; however, one variant, OMP-BRM, provides promising theoretical guarantees under certain assumptions on the feature dictionary. Another variant, OMP-TD, empirically outperforms prior methods both in approximation accuracy and efficiency on several benchmark problems.
1206.6486
Flexible Modeling of Latent Task Structures in Multitask Learning
cs.LG stat.ML
Multitask learning algorithms are typically designed assuming some fixed, a priori known latent structure shared by all the tasks. However, it is usually unclear what type of latent task structure is the most appropriate for a given multitask learning problem. Ideally, the "right" latent task structure should be learned in a data-driven manner. We present a flexible, nonparametric Bayesian model that posits a mixture of factor analyzers structure on the tasks. The nonparametric aspect makes the model expressive enough to subsume many existing models of latent task structures (e.g, mean-regularized tasks, clustered tasks, low-rank or linear/non-linear subspace assumption on tasks, etc.). Moreover, it can also learn more general task structures, addressing the shortcomings of such models. We present a variational inference algorithm for our model. Experimental results on synthetic and real-world datasets, on both regression and classification problems, demonstrate the effectiveness of the proposed method.
1206.6487
An Adaptive Algorithm for Finite Stochastic Partial Monitoring
cs.LG cs.GT stat.ML
We present a new anytime algorithm that achieves near-optimal regret for any instance of finite stochastic partial monitoring. In particular, the new algorithm achieves the minimax regret, within logarithmic factors, for both "easy" and "hard" problems. For easy problems, it additionally achieves logarithmic individual regret. Most importantly, the algorithm is adaptive in the sense that if the opponent strategy is in an "easy region" of the strategy space then the regret grows as if the problem was easy. As an implication, we show that under some reasonable additional assumptions, the algorithm enjoys an O(\sqrt{T}) regret in Dynamic Pricing, proven to be hard by Bartok et al. (2011).
1206.6488
The Nonparanormal SKEPTIC
stat.ME cs.LG stat.ML
We propose a semiparametric approach, named nonparanormal skeptic, for estimating high dimensional undirected graphical models. In terms of modeling, we consider the nonparanormal family proposed by Liu et al (2009). In terms of estimation, we exploit nonparametric rank-based correlation coefficient estimators including the Spearman's rho and Kendall's tau. In high dimensional settings, we prove that the nonparanormal skeptic achieves the optimal parametric rate of convergence in both graph and parameter estimation. This result suggests that the nonparanormal graphical models are a safe replacement of the Gaussian graphical models, even when the data are Gaussian.
1206.6514
Investigation of Color Constancy for Ubiquitous Wireless LAN/Camera Positioning: An Initial Outcome
cs.CV cs.HC
This paper present our color constancy investigation in the hybridization of Wireless LAN and Camera positioning in the mobile phone. Five typical color constancy schemes are analyzed in different location environment. The results can be used to combine with RF signals from Wireless LAN positioning by using model fitting approach in order to establish absolute positioning output. There is no conventional searching algorithm required, thus it is expected to reduce the complexity of computation. Finally we present our preliminary results to illustrate the indoor positioning algorithm performance evaluation for an indoor environment set-up.
1206.6544
Minimum KL-divergence on complements of $L_1$ balls
cs.IT math.IT
Pinsker's widely used inequality upper-bounds the total variation distance $||P-Q||_1$ in terms of the Kullback-Leibler divergence $D(P||Q)$. Although in general a bound in the reverse direction is impossible, in many applications the quantity of interest is actually $D^*(P,\eps)$ --- defined, for an arbitrary fixed $P$, as the infimum of $D(P||Q)$ over all distributions $Q$ that are $\eps$-far away from $P$ in total variation. We show that $D^*(P,\eps)\le C\eps^2 + O(\eps^3)$, where $C=C(P)=1/2$ for "balanced" distributions, thereby providing a kind of reverse Pinsker inequality. An application to large deviations is given, and some of the structural results may be of independent interest. Keywords: Pinsker inequality, Sanov's theorem, large deviations
1206.6557
Mining Event Logs to Support Workflow Resource Allocation
cs.SE cs.DB
Workflow technology is widely used to facilitate the business process in enterprise information systems (EIS), and it has the potential to reduce design time, enhance product quality and decrease product cost. However, significant limitations still exist: as an important task in the context of workflow, many present resource allocation operations are still performed manually, which are time-consuming. This paper presents a data mining approach to address the resource allocation problem (RAP) and improve the productivity of workflow resource management. Specifically, an Apriori-like algorithm is used to find the frequent patterns from the event log, and association rules are generated according to predefined resource allocation constraints. Subsequently, a correlation measure named lift is utilized to annotate the negatively correlated resource allocation rules for resource reservation. Finally, the rules are ranked using the confidence measures as resource allocation rules. Comparative experiments are performed using C4.5, SVM, ID3, Na\"ive Bayes and the presented approach, and the results show that the presented approach is effective in both accuracy and candidate resource recommendations.
1206.6561
Regenerative and Adaptive schemes Based on Network Coding for Wireless Relay Network
cs.IT math.IT
Recent technological advances in wireless communications offer new opportunities and challenges for relay network.To enhance system performance, Demodulate-Network Coding (Dm-NC) scheme has been examined at relay node; it works directly to De-map the received signals and after that forward the mixture to the destination. Simulation analysis has been proven that the performance of Dm-NC has superiority over analog-NC. In addition, the Quantize-Decode-NC scheme (QDF-NC) has been introduced. The presented simulation results clearly provide that the QDF-NC perform better than analog-NC. The toggle between analogNC and QDF-NC is simulated in order to investigate delay and power consumption reduction at relay node.
1206.6570
Extension of Three-Variable Counterfactual Casual Graphic Model: from Two-Value to Three-Value Random Variable
stat.ME cs.AI
The extension of counterfactual causal graphic model with three variables of vertex set in directed acyclic graph (DAG) is discussed in this paper by extending two- value distribution to three-value distribution of the variables involved in DAG. Using the conditional independence as ancillary information, 6 kinds of extension counterfactual causal graphic models with some variables are extended from two-value distribution to three-value distribution and the sufficient conditions of identifiability are derived.
1206.6584
An Approximate Coding-Rate Versus Minimum Distance Formula for Binary Codes
cs.IT math.IT
We devise an analytically simple as well as invertible approximate expression, which describes the relation between the minimum distance of a binary code and the corresponding maximum attainable code-rate. For example, for a rate-(1/4), length-256 binary code the best known bounds limit the attainable minimum distance to 65<d(n=256,k=64)<90, while our solution yields d(n=256,k=64)=74.4. The proposed formula attains the approximation accuracy within the rounding error for ~97% of (n,k) scenarios, where the exact value of the minimum distance is known. The results provided may be utilized for the analysis and design of efficient communication systems.
1206.6588
How the online social networks are used: Dialogs-based structure of MySpace
physics.soc-ph cs.SI
Quantitative study of collective dynamics in online social networks is a new challenge based on the abundance of empirical data. Conclusions, however, may depend on factors as user's psychology profiles and their reasons to use the online contacts. In this paper we have compiled and analyzed two datasets from \texttt{MySpace}. The data contain networked dialogs occurring within a specified time depth, high temporal resolution, and texts of messages, in which the emotion valence is assessed by using SentiStrength classifier. Performing a comprehensive analysis we obtain three groups of results: Dynamic topology of the dialogs-based networks have characteristic structure with Zipf's distribution of communities, low link reciprocity, and disassortative correlations. Overlaps supporting "weak-ties" hypothesis are found to follow the laws recently conjectured for online games. Long-range temporal correlations and persistent fluctuations occur in the time series of messages carrying positive (negative) emotion. Patterns of user communications have dominant positive emotion (attractiveness) and strong impact of circadian cycles and nteractivity times longer than one day. Taken together, these results give a new insight into functioning of the online social networks and unveil importance of the amount of information and emotion that is communicated along the social links. (All data used in this study are fully anonymized.)
1206.6646
Aggregate Skyline Join Queries: Skylines with Aggregate Operations over Multiple Relations
cs.DB
The multi-criteria decision making, which is possible with the advent of skyline queries, has been applied in many areas. Though most of the existing research is concerned with only a single relation, several real world applications require finding the skyline set of records over multiple relations. Consequently, the join operation over skylines where the preferences are local to each relation, has been proposed. In many of those cases, however, the join often involves performing aggregate operations among some of the attributes from the different relations. In this paper, we introduce such queries as "aggregate skyline join queries". Since the naive algorithm is impractical, we propose three algorithms to efficiently process such queries. The algorithms utilize certain properties of skyline sets, and processes the skylines as much as possible locally before computing the join. Experiments with real and synthetic datasets exhibit the practicality and scalability of the algorithms with respect to the cardinality and dimensionality of the relations.
1206.6648
Asynchronous Decentralized Event-triggered Control
math.OC cs.SY
In this paper we propose an approach to the implementation of controllers with decentralized strategies triggering controller updates. We consider set-ups with a central node in charge of the computation of the control commands, and a set of not co-located sensors providing measurements to the controller node. The solution we propose does not require measurements from the sensors to be synchronized in time. The sensors in our proposal provide measurements in an aperiodic way triggered by local conditions. Furthermore, in the proposed implementation (most of) the communication between nodes requires only the exchange of one bit of information (per controller update), which could aid in reducing transmission delays and as a secondary effect result in fewer transmissions being triggered.
1206.6651
Geometric properties of graph layouts optimized for greedy navigation
physics.soc-ph cs.SI
The graph layouts used for complex network studies have been mainly been developed to improve visualization. If we interpret the layouts in metric spaces such as Euclidean ones, however, the embedded spatial information can be a valuable cue for various purposes. In this work, we focus on the navigational properties of spatial graphs. We use an recently user-centric navigation protocol to explore spatial layouts of complex networks that are optimal for navigation. These layouts are generated with a simple simulated annealing optimization technique. We compared these layouts to others targeted at better visualization. We discuss the spatial statistical properties of the optimized layouts for better navigability and its implication.
1206.6679
Fixed-Form Variational Posterior Approximation through Stochastic Linear Regression
stat.CO cs.CV stat.ML
We propose a general algorithm for approximating nonstandard Bayesian posterior distributions. The algorithm minimizes the Kullback-Leibler divergence of an approximating distribution to the intractable posterior distribution. Our method can be used to approximate any posterior distribution, provided that it is given in closed form up to the proportionality constant. The approximation can be any distribution in the exponential family or any mixture of such distributions, which means that it can be made arbitrarily precise. Several examples illustrate the speed and accuracy of our approximation method in practice.
1206.6682
Pricing-based Distributed Downlink Beamforming in Multi-Cell OFDMA Networks
cs.IT cs.NI math.IT
We address the problem of downlink beamforming for mitigating the co-channel interference in multi-cell OFDMA networks. Based on the network utility maximization framework, we formulate the problem as a non-convex optimization problem subject to the per-cell power constraints, in which a general utility function of SINR is used to characterize the network performance. Some classical utility functions, such as the proportional fairness utility, the weighted sum-rate utility and the {$\alpha$}-fairness utility, are subsumed as special cases of our formulation. To solve the problem in a distributed fashion, we devise an algorithm based on the non-cooperative game with pricing mechanism. We give a sufficient condition for the convergence of the algorithm to the Nash equilibrium (NE), and analyze the information exchange overhead among the base stations. Moreover, to speed up the optimization of the beam-vectors at each cell, we derive an efficient algorithm to solve for the KKT conditions at each cell. We provide extensive simulation results to demonstrate that the proposed distributed multi-cell beamforming algorithm converges to an NE point in just a few iterations with low information exchange overhead. Moreover, it provides significant performance gains, especially under the strong interference scenario, in comparison with several existing multi-cell interference mitigation schemes, such as the distributed interference alignment method.
1206.6722
Piecewise Linear Topology, Evolutionary Algorithms, and Optimization Problems
cs.NE math.GN math.OC
Schemata theory, Markov chains, and statistical mechanics have been used to explain how evolutionary algorithms (EAs) work. Incremental success has been achieved with all of these methods, but each has been stymied by limitations related to its less-than-global view. We show that moving the investigation into topological space improves our understanding of why EAs work.
1206.6728
Epidemic thresholds of the Susceptible-Infected-Susceptible model on networks: A comparison of numerical and theoretical results
cond-mat.stat-mech cs.SI physics.soc-ph
Recent work has shown that different theoretical approaches to the dynamics of the Susceptible-Infected-Susceptible (SIS) model for epidemics lead to qualitatively different estimates for the position of the epidemic threshold in networks. Here we present large-scale numerical simulations of the SIS dynamics on various types of networks, allowing the precise determination of the effective threshold for systems of finite size N. We compare quantitatively the numerical thresholds with theoretical predictions of the heterogeneous mean-field theory and of the quenched mean-field theory. We show that the latter is in general more accurate, scaling with N with the correct exponent, but often failing to capture the correct prefactor.
1206.6735
Elimination of Spurious Ambiguity in Transition-Based Dependency Parsing
cs.CL cs.AI
We present a novel technique to remove spurious ambiguity from transition systems for dependency parsing. Our technique chooses a canonical sequence of transition operations (computation) for a given dependency tree. Our technique can be applied to a large class of bottom-up transition systems, including for instance Nivre (2004) and Attardi (2006).
1206.6741
Categorization of interestingness measures for knowledge extraction
cs.IT math.IT
Finding interesting association rules is an important and active research field in data mining. The algorithms of the Apriori family are based on two rule extraction measures, support and confidence. Although these two measures have the virtue of being algorithmically fast, they generate a prohibitive number of rules most of which are redundant and irrelevant. It is therefore necessary to use further measures which filter uninteresting rules. Many synthesis studies were then realized on the interestingness measures according to several points of view. Different reported studies have been carried out to identify "good" properties of rule extraction measures and these properties have been assessed on 61 measures. The purpose of this paper is twofold. First to extend the number of the measures and properties to be studied, in addition to the formalization of the properties proposed in the literature. Second, in the light of this formal study, to categorize the studied measures. This paper leads then to identify categories of measures in order to help the users to efficiently select an appropriate measure by choosing one or more measure(s) during the knowledge extraction process. The properties evaluation on the 61 measures has enabled us to identify 7 classes of measures, classes that we obtained using two different clustering techniques.
1206.6808
A Multi-State Power Model for Adequacy Assessment of Distributed Generation via Universal Generating Function
cs.OH cs.PF cs.SY
The current and future developments of electric power systems are pushing the boundaries of reliability assessment to consider distribution networks with renewable generators. Given the stochastic features of these elements, most modeling approaches rely on Monte Carlo simulation. The computational costs associated to the simulation approach force to treating mostly small-sized systems, i.e. with a limited number of lumped components of a given renewable technology (e.g. wind or solar, etc.) whose behavior is described by a binary state, working or failed. In this paper, we propose an analytical multi-state modeling approach for the reliability assessment of distributed generation (DG). The approach allows looking to a number of diverse energy generation technologies distributed on the system. Multiple states are used to describe the randomness in the generation units, due to the stochastic nature of the generation sources and of the mechanical degradation/failure behavior of the generation systems. The universal generating function (UGF) technique is used for the individual component multi-state modeling. A multiplication-type composition operator is introduced to combine the UGFs for the mechanical degradation and renewable generation source states into the UGF of the renewable generator power output. The overall multi-state DG system UGF is then constructed and classical reliability indices (e.g. loss of load expectation (LOLE), expected energy not supplied (EENS)) are computed from the DG system generation and load UGFs. An application of the model is shown on a DG system adapted from the IEEE 34 nodes distribution test feeder.
1206.6811
An Information-Theoretic Perspective of the Poisson Approximation via the Chen-Stein Method
cs.IT math.IT math.PR
The first part of this work considers the entropy of the sum of (possibly dependent and non-identically distributed) Bernoulli random variables. Upper bounds on the error that follows from an approximation of this entropy by the entropy of a Poisson random variable with the same mean are derived via the Chen-Stein method. The second part of this work derives new lower bounds on the total variation (TV) distance and relative entropy between the distribution of the sum of independent Bernoulli random variables and the Poisson distribution. The starting point of the derivation of the new bounds in the second part of this work is an introduction of a new lower bound on the total variation distance, whose derivation generalizes and refines the analysis by Barbour and Hall (1984), based on the Chen-Stein method for the Poisson approximation. A new lower bound on the relative entropy between these two distributions is introduced, and this lower bound is compared to a previously reported upper bound on the relative entropy by Kontoyiannis et al. (2005). The derivation of the new lower bound on the relative entropy follows from the new lower bound on the total variation distance, combined with a distribution-dependent refinement of Pinsker's inequality by Ordentlich and Weinberger (2005). Upper and lower bounds on the Bhattacharyya parameter, Chernoff information and Hellinger distance between the distribution of the sum of independent Bernoulli random variables and the Poisson distribution with the same mean are derived as well via some relations between these quantities with the total variation distance and the relative entropy. The analysis in this work combines elements of information theory with the Chen-Stein method for the Poisson approximation. The resulting bounds are easy to compute, and their applicability is exemplified.
1206.6813
A concentration theorem for projections
cs.LG stat.ML
X in R^D has mean zero and finite second moments. We show that there is a precise sense in which almost all linear projections of X into R^d (for d < D) look like a scale-mixture of spherical Gaussians -- specifically, a mixture of distributions N(0, sigma^2 I_d) where the weight of the particular sigma component is P (| X |^2 = sigma^2 D). The extent of this effect depends upon the ratio of d to D, and upon a particular coefficient of eccentricity of X's distribution. We explore this result in a variety of experiments.
1206.6814
An Empirical Comparison of Algorithms for Aggregating Expert Predictions
cs.AI cs.LG
Predicting the outcomes of future events is a challenging problem for which a variety of solution methods have been explored and attempted. We present an empirical comparison of a variety of online and offline adaptive algorithms for aggregating experts' predictions of the outcomes of five years of US National Football League games (1319 games) using expert probability elicitations obtained from an Internet contest called ProbabilitySports. We find that it is difficult to improve over simple averaging of the predictions in terms of prediction accuracy, but that there is room for improvement in quadratic loss. Somewhat surprisingly, a Bayesian estimation algorithm which estimates the variance of each expert's prediction exhibits the most consistent superior performance over simple averaging among our collection of algorithms.
1206.6815
Discriminative Learning via Semidefinite Probabilistic Models
cs.LG stat.ML
Discriminative linear models are a popular tool in machine learning. These can be generally divided into two types: The first is linear classifiers, such as support vector machines, which are well studied and provide state-of-the-art results. One shortcoming of these models is that their output (known as the 'margin') is not calibrated, and cannot be translated naturally into a distribution over the labels. Thus, it is difficult to incorporate such models as components of larger systems, unlike probabilistic based approaches. The second type of approach constructs class conditional distributions using a nonlinearity (e.g. log-linear models), but is occasionally worse in terms of classification error. We propose a supervised learning method which combines the best of both approaches. Specifically, our method provides a distribution over the labels, which is a linear function of the model parameters. As a consequence, differences between probabilities are linear functions, a property which most probabilistic models (e.g. log-linear) do not have. Our model assumes that classes correspond to linear subspaces (rather than to half spaces). Using a relaxed projection operator, we construct a measure which evaluates the degree to which a given vector 'belongs' to a subspace, resulting in a distribution over labels. Interestingly, this view is closely related to similar concepts in quantum detection theory. The resulting models can be trained either to maximize the margin or to optimize average likelihood measures. The corresponding optimization problems are semidefinite programs which can be solved efficiently. We illustrate the performance of our algorithm on real world datasets, and show that it outperforms 2nd order kernel methods.
1206.6816
MAIES: A Tool for DNA Mixture Analysis
cs.AI cs.CE stat.AP
We describe an expert system, MAIES, developed for analysing forensic identification problems involving DNA mixture traces using quantitative peak area information. Peak area information is represented by conditional Gaussian distributions, and inference based on exact junction tree propagation ascertains whether individuals, whose profiles have been measured, have contributed to the mixture. The system can also be used to predict DNA profiles of unknown contributors by separating the mixture into its individual components. The use of the system is illustrated with an application to a real world example. The system implements a novel MAP (maximum a posteriori) search algorithm that is described in an appendix.
1206.6817
A Variational Approach for Approximating Bayesian Networks by Edge Deletion
cs.AI
We consider in this paper the formulation of approximate inference in Bayesian networks as a problem of exact inference on an approximate network that results from deleting edges (to reduce treewidth). We have shown in earlier work that deleting edges calls for introducing auxiliary network parameters to compensate for lost dependencies, and proposed intuitive conditions for determining these parameters. We have also shown that our method corresponds to IBP when enough edges are deleted to yield a polytree, and corresponds to some generalizations of IBP when fewer edges are deleted. In this paper, we propose a different criteria for determining auxiliary parameters based on optimizing the KL-divergence between the original and approximate networks. We discuss the relationship between the two methods for selecting parameters, shedding new light on IBP and its generalizations. We also discuss the application of our new method to approximating inference problems which are exponential in constrained treewidth, including MAP and nonmyopic value of information.
1206.6818
Sensitivity Analysis for Threshold Decision Making with Dynamic Networks
cs.AI cs.CE
The effect of inaccuracies in the parameters of a dynamic Bayesian network can be investigated by subjecting the network to a sensitivity analysis. Having detailed the resulting sensitivity functions in our previous work, we now study the effect of parameter inaccuracies on a recommended decision in view of a threshold decision-making model. We detail the effect of varying a single and multiple parameters from a conditional probability table and present a computational procedure for establishing bounds between which assessments for these parameters can be varied without inducing a change in the recommended decision. We illustrate the various concepts involved by means of a real-life dynamic network in the field of infectious disease.
1206.6819
On the Robustness of Most Probable Explanations
cs.AI
In Bayesian networks, a Most Probable Explanation (MPE) is a complete variable instantiation with a highest probability given the current evidence. In this paper, we discuss the problem of finding robustness conditions of the MPE under single parameter changes. Specifically, we ask the question: How much change in a single network parameter can we afford to apply while keeping the MPE unchanged? We will describe a procedure, which is the first of its kind, that computes this answer for each parameter in the Bayesian network variable in time O(n exp(w)), where n is the number of network variables and w is its treewidth.
1206.6820
Optimal Coordinated Planning Amongst Self-Interested Agents with Private State
cs.GT cs.AI
Consider a multi-agent system in a dynamic and uncertain environment. Each agent's local decision problem is modeled as a Markov decision process (MDP) and agents must coordinate on a joint action in each period, which provides a reward to each agent and causes local state transitions. A social planner knows the model of every agent's MDP and wants to implement the optimal joint policy, but agents are self-interested and have private local state. We provide an incentive-compatible mechanism for eliciting state information that achieves the optimal joint plan in a Markov perfect equilibrium of the induced stochastic game. In the special case in which local problems are Markov chains and agents compete to take a single action in each period, we leverage Gittins allocation indices to provide an efficient factored algorithm and distribute computation of the optimal policy among the agents. Distributed, optimal coordinated learning in a multi-agent variant of the multi-armed bandit problem is obtained as a special case.
1206.6821
Graphical Condition for Identification in recursive SEM
cs.AI stat.ME
The paper concerns the problem of predicting the effect of actions or interventions on a system from a combination of (i) statistical data on a set of observed variables, and (ii) qualitative causal knowledge encoded in the form of a directed acyclic graph (DAG). The DAG represents a set of linear equations called Structural Equations Model (SEM), whose coefficients are parameters representing direct causal effects. Reliable quantitative conclusions can only be obtained from the model if the causal effects are uniquely determined by the data. That is, if there exists a unique parametrization for the model that makes it compatible with the data. If this is the case, the model is called identified. The main result of the paper is a general sufficient condition for identification of recursive SEM models.
1206.6822
Cutset Sampling with Likelihood Weighting
cs.AI
The paper analyzes theoretically and empirically the performance of likelihood weighting (LW) on a subset of nodes in Bayesian networks. The proposed scheme requires fewer samples to converge due to reduction in sampling variance. The method exploits the structure of the network to bound the complexity of exact inference used to compute sampling distributions, similar to Gibbs cutset sampling. Yet, the extension of the previosly proposed cutset sampling principles to likelihood weighting is non-trivial due to differences in the sampling processes of Gibbs sampler and LW. We demonstrate empirically that likelihood weighting on a cutset (LWLC) is effective time-wise and has a lower rejection rate than LW when applied to networks with many deterministic probabilities. Finally, we show that the performance of likelihood weighting on a cutset can be improved further by caching computed sampling distributions and, consequently, learning 'zeros' of the target distribution.
1206.6823
An Efficient Triplet-based Algorithm for Evidential Reasoning
cs.AI
Linear-time computational techniques have been developed for combining evidence which is available on a number of contending hypotheses. They offer a means of making the computation-intensive calculations involved more efficient in certain circumstances. Unfortunately, they restrict the orthogonal sum of evidential functions to the dichotomous structure applies only to elements and their complements. In this paper, we present a novel evidence structure in terms of a triplet and a set of algorithms for evidential reasoning. The merit of this structure is that it divides a set of evidence into three subsets, distinguishing trivial evidential elements from important ones focusing some particular elements. It avoids the deficits of the dichotomous structure in representing the preference of evidence and estimating the basic probability assignment of evidence. We have established a formalism for this structure and the general formulae for combining pieces of evidence in the form of the triplet, which have been theoretically justified.
1206.6824
Gene Expression Time Course Clustering with Countably Infinite Hidden Markov Models
cs.LG cs.CE stat.ML
Most existing approaches to clustering gene expression time course data treat the different time points as independent dimensions and are invariant to permutations, such as reversal, of the experimental time course. Approaches utilizing HMMs have been shown to be helpful in this regard, but are hampered by having to choose model architectures with appropriate complexities. Here we propose for a clustering application an HMM with a countably infinite state space; inference in this model is possible by recasting it in the hierarchical Dirichlet process (HDP) framework (Teh et al. 2006), and hence we call it the HDP-HMM. We show that the infinite model outperforms model selection methods over finite models, and traditional time-independent methods, as measured by a variety of external and internal indices for clustering on two large publicly available data sets. Moreover, we show that the infinite models utilize more hidden states and employ richer architectures (e.g. state-to-state transitions) without the damaging effects of overfitting.
1206.6825
Non-Minimal Triangulations for Mixed Stochastic/Deterministic Graphical Models
cs.AI cs.DS
We observe that certain large-clique graph triangulations can be useful to reduce both computational and space requirements when making queries on mixed stochastic/deterministic graphical models. We demonstrate that many of these large-clique triangulations are non-minimal and are thus unattainable via the variable elimination algorithm. We introduce ancestral pairs as the basis for novel triangulation heuristics and prove that no more than the addition of edges between ancestral pairs need be considered when searching for state space optimal triangulations in such graphs. Empirical results on random and real world graphs show that the resulting triangulations that yield significant speedups are almost always non-minimal. We also give an algorithm and correctness proof for determining if a triangulation can be obtained via elimination, and we show that the decision problem associated with finding optimal state space triangulations in this mixed stochastic/deterministic setting is NP-complete.
1206.6827
Linear Algebra Approach to Separable Bayesian Networks
cs.AI
Separable Bayesian Networks, or the Influence Model, are dynamic Bayesian Networks in which the conditional probability distribution can be separated into a function of only the marginal distribution of a node's neighbors, instead of the joint distributions. In terms of modeling, separable networks has rendered possible siginificant reduction in complexity, as the state space is only linear in the number of variables on the network, in contrast to a typical state space which is exponential. In this work, We describe the connection between an arbitrary Conditional Probability Table (CPT) and separable systems using linear algebra. We give an alternate proof on the equivalence of sufficiency and separability. We present a computational method for testing whether a given CPT is separable.
1206.6828
Advances in exact Bayesian structure discovery in Bayesian networks
cs.LG cs.AI stat.ML
We consider a Bayesian method for learning the Bayesian network structure from complete data. Recently, Koivisto and Sood (2004) presented an algorithm that for any single edge computes its marginal posterior probability in O(n 2^n) time, where n is the number of attributes; the number of parents per attribute is bounded by a constant. In this paper we show that the posterior probabilities for all the n (n - 1) potential edges can be computed in O(n 2^n) total time. This result is achieved by a forward-backward technique and fast Moebius transform algorithms, which are of independent interest. The resulting speedup by a factor of about n^2 allows us to experimentally study the statistical power of learning moderate-size networks. We report results from a simulation study that covers data sets with 20 to 10,000 records over 5 to 25 discrete attributes
1206.6829
Inequality Constraints in Causal Models with Hidden Variables
cs.AI stat.ME
We present a class of inequality constraints on the set of distributions induced by local interventions on variables governed by a causal Bayesian network, in which some of the variables remain unmeasured. We derive bounds on causal effects that are not directly measured in randomized experiments. We derive instrumental inequality type of constraints on nonexperimental distributions. The results have applications in testing causal models with observational or experimental data.
1206.6830
The AI&M Procedure for Learning from Incomplete Data
stat.ME cs.AI cs.LG
We investigate methods for parameter learning from incomplete data that is not missing at random. Likelihood-based methods then require the optimization of a profile likelihood that takes all possible missingness mechanisms into account. Optimzing this profile likelihood poses two main difficulties: multiple (local) maxima, and its very high-dimensional parameter space. In this paper a new method is presented for optimizing the profile likelihood that addresses the second difficulty: in the proposed AI&M (adjusting imputation and mazimization) procedure the optimization is performed by operations in the space of data completions, rather than directly in the parameter space of the profile likelihood. We apply the AI&M method to learning parameters for Bayesian networks. The method is compared against conservative inference, which takes into account each possible data completion, and against EM. The results indicate that likelihood-based inference is still feasible in the case of unknown missingness mechanisms, and that conservative inference is unnecessarily weak. On the other hand, our results also provide evidence that the EM algorithm is still quite effective when the data is not missing at random.
1206.6831
Pearl's Calculus of Intervention Is Complete
cs.AI
This paper is concerned with graphical criteria that can be used to solve the problem of identifying casual effects from nonexperimental data in a causal Bayesian network structure, i.e., a directed acyclic graph that represents causal relationships. We first review Pearl's work on this topic [Pearl, 1995], in which several useful graphical criteria are presented. Then we present a complete algorithm [Huang and Valtorta, 2006b] for the identifiability problem. By exploiting the completeness of this algorithm, we prove that the three basic do-calculus rules that Pearl presents are complete, in the sense that, if a causal effect is identifiable, there exists a sequence of applications of the rules of the do-calculus that transforms the causal effect formula into a formula that only includes observational quantities.
1206.6832
Convex Structure Learning for Bayesian Networks: Polynomial Feature Selection and Approximate Ordering
cs.LG stat.ML
We present a new approach to learning the structure and parameters of a Bayesian network based on regularized estimation in an exponential family representation. Here we show that, given a fixed variable order, the optimal structure and parameters can be learned efficiently, even without restricting the size of the parent sets. We then consider the problem of optimizing the variable order for a given set of features. This is still a computationally hard problem, but we present a convex relaxation that yields an optimal 'soft' ordering in polynomial time. One novel aspect of the approach is that we do not perform a discrete search over DAG structures, nor over variable orders, but instead solve a continuous relaxation that can then be rounded to obtain a valid network structure. We conduct an experimental comparison against standard structure search procedures over standard objectives, which cope with local minima, and evaluate the advantages of using convex relaxations that reduce the effects of local minima.
1206.6833
Matrix Tile Analysis
cs.LG cs.CE cs.NA stat.ML
Many tasks require finding groups of elements in a matrix of numbers, symbols or class likelihoods. One approach is to use efficient bi- or tri-linear factorization techniques including PCA, ICA, sparse matrix factorization and plaid analysis. These techniques are not appropriate when addition and multiplication of matrix elements are not sensibly defined. More directly, methods like bi-clustering can be used to classify matrix elements, but these methods make the overly-restrictive assumption that the class of each element is a function of a row class and a column class. We introduce a general computational problem, `matrix tile analysis' (MTA), which consists of decomposing a matrix into a set of non-overlapping tiles, each of which is defined by a subset of usually nonadjacent rows and columns. MTA does not require an algebra for combining tiles, but must search over discrete combinations of tile assignments. Exact MTA is a computationally intractable integer programming problem, but we describe an approximate iterative technique and a computationally efficient sum-product relaxation of the integer program. We compare the effectiveness of these methods to PCA and plaid on hundreds of randomly generated tasks. Using double-gene-knockout data, we show that MTA finds groups of interacting yeast genes that have biologically-related functions.
1206.6834
A new axiomatization for likelihood gambles
cs.AI
This paper studies a new and more general axiomatization than one presented previously for preference on likelihood gambles. Likelihood gambles describe actions in a situation where a decision maker knows multiple probabilistic models and a random sample generated from one of those models but does not know prior probability of models. This new axiom system is inspired by Jensen's axiomatization of probabilistic gambles. Our approach provides a new perspective to the role of data in decision making under ambiguity. It avoids one of the most controversial issue of Bayesian methodology namely the assumption of prior probability.
1206.6835
Dimension Reduction in Singularly Perturbed Continuous-Time Bayesian Networks
cs.AI
Continuous-time Bayesian networks (CTBNs) are graphical representations of multi-component continuous-time Markov processes as directed graphs. The edges in the network represent direct influences among components. The joint rate matrix of the multi-component process is specified by means of conditional rate matrices for each component separately. This paper addresses the situation where some of the components evolve on a time scale that is much shorter compared to the time scale of the other components. In this paper, we prove that in the limit where the separation of scales is infinite, the Markov process converges (in distribution, or weakly) to a reduced, or effective Markov process that only involves the slow components. We also demonstrate that for reasonable separation of scale (an order of magnitude) the reduced process is a good approximation of the marginal process over the slow components. We provide a simple procedure for building a reduced CTBN for this effective process, with conditional rate matrices that can be directly calculated from the original CTBN, and discuss the implications for approximate reasoning in large systems.
1206.6836
Methods for computing state similarity in Markov Decision Processes
cs.AI
A popular approach to solving large probabilistic systems relies on aggregating states based on a measure of similarity. Many approaches in the literature are heuristic. A number of recent methods rely instead on metrics based on the notion of bisimulation, or behavioral equivalence between states (Givan et al, 2001, 2003; Ferns et al, 2004). An integral component of such metrics is the Kantorovich metric between probability distributions. However, while this metric enables many satisfying theoretical properties, it is costly to compute in practice. In this paper, we use techniques from network optimization and statistical sampling to overcome this problem. We obtain in this manner a variety of distance functions for MDP state aggregation, which differ in the tradeoff between time and space complexity, as well as the quality of the aggregation. We provide an empirical evaluation of these trade-offs.
1206.6837
Residual Belief Propagation: Informed Scheduling for Asynchronous Message Passing
cs.AI
Inference for probabilistic graphical models is still very much a practical challenge in large domains. The commonly used and effective belief propagation (BP) algorithm and its generalizations often do not converge when applied to hard, real-life inference tasks. While it is widely recognized that the scheduling of messages in these algorithms may have significant consequences, this issue remains largely unexplored. In this work, we address the question of how to schedule messages for asynchronous propagation so that a fixed point is reached faster and more often. We first show that any reasonable asynchronous BP converges to a unique fixed point under conditions similar to those that guarantee convergence of synchronous BP. In addition, we show that the convergence rate of a simple round-robin schedule is at least as good as that of synchronous propagation. We then propose residual belief propagation (RBP), a novel, easy-to-implement, asynchronous propagation algorithm that schedules messages in an informed way, that pushes down a bound on the distance from the fixed point. Finally, we demonstrate the superiority of RBP over state-of-the-art methods for a variety of challenging synthetic and real-life problems: RBP converges significantly more often than other methods; and it significantly reduces running time until convergence, even when other methods converge.
1206.6838
Continuous Time Markov Networks
cs.AI cs.LG
A central task in many applications is reasoning about processes that change in a continuous time. The mathematical framework of Continuous Time Markov Processes provides the basic foundations for modeling such systems. Recently, Nodelman et al introduced continuous time Bayesian networks (CTBNs), which allow a compact representation of continuous-time processes over a factored state space. In this paper, we introduce continuous time Markov networks (CTMNs), an alternative representation language that represents a different type of continuous-time dynamics. In many real life processes, such as biological and chemical systems, the dynamics of the process can be naturally described as an interplay between two forces - the tendency of each entity to change its state, and the overall fitness or energy function of the entire system. In our model, the first force is described by a continuous-time proposal process that suggests possible local changes to the state of the system at different rates. The second force is represented by a Markov network that encodes the fitness, or desirability, of different states; a proposed local change is then accepted with a probability that is a function of the change in the fitness distribution. We show that the fitness distribution is also the stationary distribution of the Markov process, so that this representation provides a characterization of a temporal process whose stationary distribution has a compact graphical representation. This allows us to naturally capture a different type of structure in complex dynamical processes, such as evolving biological sequences. We describe the semantics of the representation, its basic properties, and how it compares to CTBNs. We also provide algorithms for learning such models from data, and discuss its applicability to biological sequence evolution.
1206.6841
Asymmetric separation for local independence graphs
cs.AI
Directed possibly cyclic graphs have been proposed by Didelez (2000) and Nodelmann et al. (2002) in order to represent the dynamic dependencies among stochastic processes. These dependencies are based on a generalization of Granger-causality to continuous time, first developed by Schweder (1970) for Markov processes, who called them local dependencies. They deserve special attention as they are asymmetric unlike stochastic (in)dependence. In this paper we focus on their graphical representation and develop a suitable, i.e. asymmetric notion of separation, called delta-separation. The properties of this graph separation as well as of local independence are investigated in detail within a framework of asymmetric (semi)graphoids allowing a deeper insight into what information can be read off these graphs.
1206.6842
Chi-square Tests Driven Method for Learning the Structure of Factored MDPs
cs.LG cs.AI stat.ML
SDYNA is a general framework designed to address large stochastic reinforcement learning problems. Unlike previous model based methods in FMDPs, it incrementally learns the structure and the parameters of a RL problem using supervised learning techniques. Then, it integrates decision-theoric planning algorithms based on FMDPs to compute its policy. SPITI is an instanciation of SDYNA that exploits ITI, an incremental decision tree algorithm, to learn the reward function and the Dynamic Bayesian Networks with local structures representing the transition function of the problem. These representations are used by an incremental version of the Structured Value Iteration algorithm. In order to learn the structure, SPITI uses Chi-Square tests to detect the independence between two probability distributions. Thus, we study the relation between the threshold used in the Chi-Square test, the size of the model built and the relative error of the value function of the induced policy with respect to the optimal value. We show that, on stochastic problems, one can tune the threshold so as to generate both a compact model and an efficient policy. Then, we show that SPITI, while keeping its model compact, uses the generalization property of its learning method to perform better than a stochastic classical tabular algorithm in large RL problem with an unknown structure. We also introduce a new measure based on Chi-Square to qualify the accuracy of the model learned by SPITI. We qualitatively show that the generalization property in SPITI within the FMDP framework may prevent an exponential growth of the time required to learn the structure of large stochastic RL problems.
1206.6843
Adjacency-Faithfulness and Conservative Causal Inference
cs.AI stat.ME
Most causal inference algorithms in the literature (e.g., Pearl (2000), Spirtes et al. (2000), Heckerman et al. (1999)) exploit an assumption usually referred to as the causal Faithfulness or Stability condition. In this paper, we highlight two components of the condition used in constraint-based algorithms, which we call "Adjacency-Faithfulness" and "Orientation-Faithfulness". We point out that assuming Adjacency-Faithfulness is true, it is in principle possible to test the validity of Orientation-Faithfulness. Based on this observation, we explore the consequence of making only the Adjacency-Faithfulness assumption. We show that the familiar PC algorithm has to be modified to be (asymptotically) correct under the weaker, Adjacency-Faithfulness assumption. Roughly the modified algorithm, called Conservative PC (CPC), checks whether Orientation-Faithfulness holds in the orientation phase, and if not, avoids drawing certain causal conclusions the PC algorithm would draw. However, if the stronger, standard causal Faithfulness condition actually obtains, the CPC algorithm is shown to output the same pattern as the PC algorithm does in the large sample limit. We also present a simulation study showing that the CPC algorithm runs almost as fast as the PC algorithm, and outputs significantly fewer false causal arrowheads than the PC algorithm does on realistic sample sizes. We end our paper by discussing how score-based algorithms such as GES perform when the Adjacency-Faithfulness but not the standard causal Faithfulness condition holds, and how to extend our work to the FCI algorithm, which allows for the possibility of latent variables.
1206.6844
From influence diagrams to multi-operator cluster DAGs
cs.AI
There exist several architectures to solve influence diagrams using local computations, such as the Shenoy-Shafer, the HUGIN, or the Lazy Propagation architectures. They all extend usual variable elimination algorithms thanks to the use of so-called 'potentials'. In this paper, we introduce a new architecture, called the Multi-operator Cluster DAG architecture, which can produce decompositions with an improved constrained induced-width, and therefore induce potentially exponential gains. Its principle is to benefit from the composite nature of influence diagrams, instead of using uniform potentials, in order to better analyze the problem structure.
1206.6845
Gibbs Sampling for (Coupled) Infinite Mixture Models in the Stick Breaking Representation
stat.ME cs.LG stat.ML
Nonparametric Bayesian approaches to clustering, information retrieval, language modeling and object recognition have recently shown great promise as a new paradigm for unsupervised data analysis. Most contributions have focused on the Dirichlet process mixture models or extensions thereof for which efficient Gibbs samplers exist. In this paper we explore Gibbs samplers for infinite complexity mixture models in the stick breaking representation. The advantage of this representation is improved modeling flexibility. For instance, one can design the prior distribution over cluster sizes or couple multiple infinite mixture models (e.g. over time) at the level of their parameters (i.e. the dependent Dirichlet process model). However, Gibbs samplers for infinite mixture models (as recently introduced in the statistics literature) seem to mix poorly over cluster labels. Among others issues, this can have the adverse effect that labels for the same cluster in coupled mixture models are mixed up. We introduce additional moves in these samplers to improve mixing over cluster labels and to bring clusters into correspondence. An application to modeling of storm trajectories is used to illustrate these ideas.
1206.6846
Approximate Separability for Weak Interaction in Dynamic Systems
cs.LG cs.AI stat.ML
One approach to monitoring a dynamic system relies on decomposition of the system into weakly interacting subsystems. An earlier paper introduced a notion of weak interaction called separability, and showed that it leads to exact propagation of marginals for prediction. This paper addresses two questions left open by the earlier paper: can we define a notion of approximate separability that occurs naturally in practice, and do separability and approximate separability lead to accurate monitoring? The answer to both questions is afirmative. The paper also analyzes the structure of approximately separable decompositions, and provides some explanation as to why these models perform well.
1206.6847
Identifying the Relevant Nodes Without Learning the Model
cs.LG cs.AI stat.ML
We propose a method to identify all the nodes that are relevant to compute all the conditional probability distributions for a given set of nodes. Our method is simple, effcient, consistent, and does not require learning a Bayesian network first. Therefore, our method can be applied to high-dimensional databases, e.g. gene expression databases.
1206.6849
General-Purpose MCMC Inference over Relational Structures
cs.AI
Tasks such as record linkage and multi-target tracking, which involve reconstructing the set of objects that underlie some observed data, are particularly challenging for probabilistic inference. Recent work has achieved efficient and accurate inference on such problems using Markov chain Monte Carlo (MCMC) techniques with customized proposal distributions. Currently, implementing such a system requires coding MCMC state representations and acceptance probability calculations that are specific to a particular application. An alternative approach, which we pursue in this paper, is to use a general-purpose probabilistic modeling language (such as BLOG) and a generic Metropolis-Hastings MCMC algorithm that supports user-supplied proposal distributions. Our algorithm gains flexibility by using MCMC states that are only partial descriptions of possible worlds; we provide conditions under which MCMC over partial worlds yields correct answers to queries. We also show how to use a context-specific Bayes net to identify the factors in the acceptance probability that need to be computed for a given proposed move. Experimental results on a citation matching task show that our general-purpose MCMC engine compares favorably with an application-specific system.
1206.6850
Visualization of Collaborative Data
cs.GR cs.AI cs.HC
Collaborative data consist of ratings relating two distinct sets of objects: users and items. Much of the work with such data focuses on filtering: predicting unknown ratings for pairs of users and items. In this paper we focus on the problem of visualizing the information. Given all of the ratings, our task is to embed all of the users and items as points in the same Euclidean space. We would like to place users near items that they have rated (or would rate) high, and far away from those they would give a low rating. We pose this problem as a real-valued non-linear Bayesian network and employ Markov chain Monte Carlo and expectation maximization to find an embedding. We present a metric by which to judge the quality of a visualization and compare our results to local linear embedding and Eigentaste on three real-world datasets.
1206.6851
A compact, hierarchical Q-function decomposition
cs.LG cs.AI stat.ML
Previous work in hierarchical reinforcement learning has faced a dilemma: either ignore the values of different possible exit states from a subroutine, thereby risking suboptimal behavior, or represent those values explicitly thereby incurring a possibly large representation cost because exit values refer to nonlocal aspects of the world (i.e., all subsequent rewards). This paper shows that, in many cases, one can avoid both of these problems. The solution is based on recursively decomposing the exit value function in terms of Q-functions at higher levels of the hierarchy. This leads to an intuitively appealing runtime architecture in which a parent subroutine passes to its child a value function on the exit states and the child reasons about how its choices affect the exit value. We also identify structural conditions on the value function and transition distributions that allow much more concise representations of exit state distributions, leading to further state abstraction. In essence, the only variables whose exit values need be considered are those that the parent cares about and the child affects. We demonstrate the utility of our algorithms on a series of increasingly complex environments.
1206.6852
Structured Priors for Structure Learning
cs.LG cs.AI stat.ML
Traditional approaches to Bayes net structure learning typically assume little regularity in graph structure other than sparseness. However, in many cases, we expect more systematicity: variables in real-world systems often group into classes that predict the kinds of probabilistic dependencies they participate in. Here we capture this form of prior knowledge in a hierarchical Bayesian framework, and exploit it to enable structure learning and type discovery from small datasets. Specifically, we present a nonparametric generative model for directed acyclic graphs as a prior for Bayes net structure learning. Our model assumes that variables come in one or more classes and that the prior probability of an edge existing between two variables is a function only of their classes. We derive an MCMC algorithm for simultaneous inference of the number of classes, the class assignments of variables, and the Bayes net structure over variables. For several realistic, sparse datasets, we show that the bias towards systematicity of connections provided by our model yields more accurate learned networks than a traditional, uniform prior approach, and that the classes found by our model are appropriate.
1206.6853
A theoretical study of Y structures for causal discovery
cs.AI stat.ME
There are several existing algorithms that under appropriate assumptions can reliably identify a subset of the underlying causal relationships from observational data. This paper introduces the first computationally feasible score-based algorithm that can reliably identify causal relationships in the large sample limit for discrete models, while allowing for the possibility that there are unobserved common causes. In doing so, the algorithm does not ever need to assign scores to causal structures with unobserved common causes. The algorithm is based on the identification of so called Y substructures within Bayesian network structures that can be learned from observational data. An example of a Y substructure is A -> C, B -> C, C -> D. After providing background on causal discovery, the paper proves the conditions under which the algorithm is reliable in the large sample limit.
1206.6854
Belief Update in CLG Bayesian Networks With Lazy Propagation
cs.AI
In recent years Bayesian networks (BNs) with a mixture of continuous and discrete variables have received an increasing level of attention. We present an architecture for exact belief update in Conditional Linear Gaussian BNs (CLG BNs). The architecture is an extension of lazy propagation using operations of Lauritzen & Jensen [6] and Cowell [2]. By decomposing clique and separator potentials into sets of factors, the proposed architecture takes advantage of independence and irrelevance properties induced by the structure of the graph and the evidence. The resulting benefits are illustrated by examples. Results of a preliminary empirical performance evaluation indicate a significant potential of the proposed architecture.
1206.6856
Reasoning about Uncertainty in Metric Spaces
cs.AI
We set up a model for reasoning about metric spaces with belief theoretic measures. The uncertainty in these spaces stems from both probability and metric. To represent both aspect of uncertainty, we choose an expected distance function as a measure of uncertainty. A formal logical system is constructed for the reasoning about expected distance. Soundness and completeness are shown for this logic. For reasoning on product metric space with uncertainty, a new metric is defined and shown to have good properties.
1206.6857
Faster Gaussian Summation: Theory and Experiment
cs.LG cs.NA stat.ML
We provide faster algorithms for the problem of Gaussian summation, which occurs in many machine learning methods. We develop two new extensions - an O(Dp) Taylor expansion for the Gaussian kernel with rigorous error bounds and a new error control scheme integrating any arbitrary approximation method - within the best discretealgorithmic framework using adaptive hierarchical data structures. We rigorously evaluate these techniques empirically in the context of optimal bandwidth selection in kernel density estimation, revealing the strengths and weaknesses of current state-of-the-art approaches for the first time. Our results demonstrate that the new error control scheme yields improved performance, whereas the series expansion approach is only effective in low dimensions (five or less).
1206.6858
Sequential Document Representations and Simplicial Curves
cs.IR cs.LG
The popular bag of words assumption represents a document as a histogram of word occurrences. While computationally efficient, such a representation is unable to maintain any sequential information. We present a continuous and differentiable sequential document representation that goes beyond the bag of words assumption, and yet is efficient and effective. This representation employs smooth curves in the multinomial simplex to account for sequential information. We discuss the representation and its geometric properties and demonstrate its applicability for the task of text classification.
1206.6859
Propagation of Delays in the National Airspace System
cs.AI
The National Airspace System (NAS) is a large and complex system with thousands of interrelated components: administration, control centers, airports, airlines, aircraft, passengers, etc. The complexity of the NAS creates many difficulties in management and control. One of the most pressing problems is flight delay. Delay creates high cost to airlines, complaints from passengers, and difficulties for airport operations. As demand on the system increases, the delay problem becomes more and more prominent. For this reason, it is essential for the Federal Aviation Administration to understand the causes of delay and to find ways to reduce delay. Major contributing factors to delay are congestion at the origin airport, weather, increasing demand, and air traffic management (ATM) decisions such as the Ground Delay Programs (GDP). Delay is an inherently stochastic phenomenon. Even if all known causal factors could be accounted for, macro-level national airspace system (NAS) delays could not be predicted with certainty from micro-level aircraft information. This paper presents a stochastic model that uses Bayesian Networks (BNs) to model the relationships among different components of aircraft delay and the causal factors that affect delays. A case study on delays of departure flights from Chicago O'Hare international airport (ORD) to Hartsfield-Jackson Atlanta International Airport (ATL) reveals how local and system level environmental and human-caused factors combine to affect components of delay, and how these components contribute to the final arrival delay at the destination airport.
1206.6860
Predicting Conditional Quantiles via Reduction to Classification
cs.LG stat.ML
We show how to reduce the process of predicting general order statistics (and the median in particular) to solving classification. The accompanying theoretical statement shows that the regret of the classifier bounds the regret of the quantile regression under a quantile loss. We also test this reduction empirically against existing quantile regression methods on large real-world datasets and discover that it provides state-of-the-art performance.
1206.6861
Stratified Analysis of `Probabilities of Causation'
stat.ME cs.AI
This paper proposes new formulas for the probabilities of causation difined by Pearl (2000). Tian and Pearl (2000a, 2000b) showed how to bound the quantities of the probabilities of causation from experimental and observational data, under the minimal assumptions about the data-generating process. We derive narrower bounds than Tian-Pearl bounds by making use of the covariate information measured in experimental and observational studies. In addition, we provide identifiable case under no-prevention assumption and discuss the covariate selection problem from the viewpoint of estimation accuracy. These results are helpful in providing more evidence for public policy assessment and dicision making problems.
1206.6862
On the Number of Samples Needed to Learn the Correct Structure of a Bayesian Network
cs.LG cs.AI stat.ML
Bayesian Networks (BNs) are useful tools giving a natural and compact representation of joint probability distributions. In many applications one needs to learn a Bayesian Network (BN) from data. In this context, it is important to understand the number of samples needed in order to guarantee a successful learning. Previous work have studied BNs sample complexity, yet it mainly focused on the requirement that the learned distribution will be close to the original distribution which generated the data. In this work, we study a different aspect of the learning, namely the number of samples needed in order to learn the correct structure of the network. We give both asymptotic results, valid in the large sample limit, and experimental results, demonstrating the learning behavior for feasible sample sizes. We show that structure learning is a more difficult task, compared to approximating the correct distribution, in the sense that it requires a much larger number of samples, regardless of the computational power available for the learner.
1206.6863
Bayesian Multicategory Support Vector Machines
cs.LG stat.ML
We show that the multi-class support vector machine (MSVM) proposed by Lee et. al. (2004), can be viewed as a MAP estimation procedure under an appropriate probabilistic interpretation of the classifier. We also show that this interpretation can be extended to a hierarchical Bayesian architecture and to a fully-Bayesian inference procedure for multi-class classification based on data augmentation. We present empirical results that show that the advantages of the Bayesian formalism are obtained without a loss in classification accuracy.
1206.6864
Infinite Hidden Relational Models
cs.AI cs.DB cs.LG
In many cases it makes sense to model a relationship symmetrically, not implying any particular directionality. Consider the classical example of a recommendation system where the rating of an item by a user should symmetrically be dependent on the attributes of both the user and the item. The attributes of the (known) relationships are also relevant for predicting attributes of entities and for predicting attributes of new relations. In recommendation systems, the exploitation of relational attributes is often referred to as collaborative filtering. Again, in many applications one might prefer to model the collaborative effect in a symmetrical way. In this paper we present a relational model, which is completely symmetrical. The key innovation is that we introduce for each entity (or object) an infinite-dimensional latent variable as part of a Dirichlet process (DP) model. We discuss inference in the model, which is based on a DP Gibbs sampler, i.e., the Chinese restaurant process. We extend the Chinese restaurant process to be applicable to relational modeling. Our approach is evaluated in three applications. One is a recommendation system based on the MovieLens data set. The second application concerns the prediction of the function of yeast genes/proteins on the data set of KDD Cup 2001 using a multi-relational model. The third application involves a relational medical domain. The experimental results show that our model gives significantly improved estimates of attributes describing relationships or entities in complex relational models.
1206.6865
A Non-Parametric Bayesian Method for Inferring Hidden Causes
cs.LG cs.AI stat.ML
We present a non-parametric Bayesian approach to structure learning with hidden causes. Previous Bayesian treatments of this problem define a prior over the number of hidden causes and use algorithms such as reversible jump Markov chain Monte Carlo to move between solutions. In contrast, we assume that the number of hidden causes is unbounded, but only a finite number influence observable variables. This makes it possible to use a Gibbs sampler to approximate the distribution over causal structures. We evaluate the performance of both approaches in discovering hidden causes in simulated data, and use our non-parametric approach to discover hidden causes in a real medical dataset.
1206.6866
Stochastic Optimal Control in Continuous Space-Time Multi-Agent Systems
cs.MA cs.SY math.OC
Recently, a theory for stochastic optimal control in non-linear dynamical systems in continuous space-time has been developed (Kappen, 2005). We apply this theory to collaborative multi-agent systems. The agents evolve according to a given non-linear dynamics with additive Wiener noise. Each agent can control its own dynamics. The goal is to minimize the accumulated joint cost, which consists of a state dependent term and a term that is quadratic in the control. We focus on systems of non-interacting agents that have to distribute themselves optimally over a number of targets, given a set of end-costs for the different possible agent-target combinations. We show that optimal control is the combinatorial sum of independent single-agent single-target optimal controls weighted by a factor proportional to the end-costs of the different combinations. Thus, multi-agent control is related to a standard graphical model inference problem. The additional computational cost compared to single-agent control is exponential in the tree-width of the graph specifying the combinatorial sum times the number of targets. We illustrate the result by simulations of systems with up to 42 agents.
1206.6867
Axiomatic Foundations for a Class of Generalized Expected Utility: Algebraic Expected Utility
cs.AI cs.GT
Expected Utility: Algebraic Expected Utility In this paper, we provide two axiomatizations of algebraic expected utility, which is a particular generalized expected utility, in a von Neumann-Morgenstern setting, i.e. uncertainty representation is supposed to be given and here to be described by a plausibility measure valued on a semiring, which could be partially ordered. We show that axioms identical to those for expected utility entail that preferences are represented by an algebraic expected utility. This algebraic approach allows many previous propositions (expected utility, binary possibilistic utility,...) to be unified in a same general framework and proves that the obtained utility enjoys the same nice features as expected utility: linearity, dynamic consistency, autoduality of the underlying uncertainty measure, autoduality of the decision criterion and possibility of modeling decision maker's attitude toward uncertainty.
1206.6868
Bayesian Random Fields: The Bethe-Laplace Approximation
cs.LG stat.ML
While learning the maximum likelihood value of parameters of an undirected graphical model is hard, modelling the posterior distribution over parameters given data is harder. Yet, undirected models are ubiquitous in computer vision and text modelling (e.g. conditional random fields). But where Bayesian approaches for directed models have been very successful, a proper Bayesian treatment of undirected models in still in its infant stages. We propose a new method for approximating the posterior of the parameters given data based on the Laplace approximation. This approximation requires the computation of the covariance matrix over features which we compute using the linear response approximation based in turn on loopy belief propagation. We develop the theory for conditional and 'unconditional' random fields with or without hidden variables. In the conditional setting we introduce a new variant of bagging suitable for structured domains. Here we run the loopy max-product algorithm on a 'super-graph' composed of graphs for individual models sampled from the posterior and connected by constraints. Experiments on real world data validate the proposed methods.
1206.6869
Recognizing Activities and Spatial Context Using Wearable Sensors
cs.AI
We introduce a new dynamic model with the capability of recognizing both activities that an individual is performing as well as where that ndividual is located. Our model is novel in that it utilizes a dynamic graphical model to jointly estimate both activity and spatial context over time based on the simultaneous use of asynchronous observations consisting of GPS measurements, and measurements from a small mountable sensor board. Joint inference is quite desirable as it has the ability to improve accuracy of the model. A key goal, however, in designing our overall system is to be able to perform accurate inference decisions while minimizing the amount of hardware an individual must wear. This minimization leads to greater comfort and flexibility, decreased power requirements and therefore increased battery life, and reduced cost. We show results indicating that our joint measurement model outperforms measurements from either the sensor board or GPS alone, using two types of probabilistic inference procedures, namely particle filtering and pruned exact inference.
1206.6870
Incremental Model-based Learners With Formal Learning-Time Guarantees
cs.LG cs.AI stat.ML
Model-based learning algorithms have been shown to use experience efficiently when learning to solve Markov Decision Processes (MDPs) with finite state and action spaces. However, their high computational cost due to repeatedly solving an internal model inhibits their use in large-scale problems. We propose a method based on real-time dynamic programming (RTDP) to speed up two model-based algorithms, RMAX and MBIE (model-based interval estimation), resulting in computationally much faster algorithms with little loss compared to existing bounds. Specifically, our two new learning algorithms, RTDP-RMAX and RTDP-IE, have considerably smaller computational demands than RMAX and MBIE. We develop a general theoretical framework that allows us to prove that both are efficient learners in a PAC (probably approximately correct) sense. We also present an experimental evaluation of these new algorithms that helps quantify the tradeoff between computational and experience demands.
1206.6871
Ranking by Dependence - A Fair Criteria
cs.LG stat.ML
Estimating the dependences between random variables, and ranking them accordingly, is a prevalent problem in machine learning. Pursuing frequentist and information-theoretic approaches, we first show that the p-value and the mutual information can fail even in simplistic situations. We then propose two conditions for regularizing an estimator of dependence, which leads to a simple yet effective new measure. We discuss its advantages and compare it to well-established model-selection criteria. Apart from that, we derive a simple constraint for regularizing parameter estimates in a graphical model. This results in an analytical approximation for the optimal value of the equivalent sample size, which agrees very well with the more involved Bayesian approach in our experiments.
1206.6872
A Self-Supervised Terrain Roughness Estimator for Off-Road Autonomous Driving
cs.CV cs.LG cs.RO
We present a machine learning approach for estimating the second derivative of a drivable surface, its roughness. Robot perception generally focuses on the first derivative, obstacle detection. However, the second derivative is also important due to its direct relation (with speed) to the shock the vehicle experiences. Knowing the second derivative allows a vehicle to slow down in advance of rough terrain. Estimating the second derivative is challenging due to uncertainty. For example, at range, laser readings may be so sparse that significant information about the surface is missing. Also, a high degree of precision is required in projecting laser readings. This precision may be unavailable due to latency or error in the pose estimation. We model these sources of error as a multivariate polynomial. Its coefficients are learned using the shock data as ground truth -- the accelerometers are used to train the lasers. The resulting classifier operates on individual laser readings from a road surface described by a 3D point cloud. The classifier identifies sections of road where the second derivative is likely to be large. Thus, the vehicle can slow down in advance, reducing the shock it experiences. The algorithm is an evolution of one we used in the 2005 DARPA Grand Challenge. We analyze it using data from that route.
1206.6873
Variable noise and dimensionality reduction for sparse Gaussian processes
cs.LG stat.ML
The sparse pseudo-input Gaussian process (SPGP) is a new approximation method for speeding up GP regression in the case of a large number of data points N. The approximation is controlled by the gradient optimization of a small set of M `pseudo-inputs', thereby reducing complexity from N^3 to NM^2. One limitation of the SPGP is that this optimization space becomes impractically big for high dimensional data sets. This paper addresses this limitation by performing automatic dimensionality reduction. A projection of the input space to a low dimensional space is learned in a supervised manner, alongside the pseudo-inputs, which now live in this reduced space. The paper also investigates the suitability of the SPGP for modeling data with input-dependent noise. A further extension of the model is made to make it even more powerful in this regard - we learn an uncertainty parameter for each pseudo-input. The combination of sparsity, reduced dimension, and input-dependent noise makes it possible to apply GPs to much larger and more complex data sets than was previously practical. We demonstrate the benefits of these methods on several synthetic and real world problems.
1206.6874
Bayesian Inference for Gaussian Mixed Graph Models
stat.ME cs.AI
We introduce priors and algorithms to perform Bayesian inference in Gaussian models defined by acyclic directed mixed graphs. Such a class of graphs, composed of directed and bi-directed edges, is a representation of conditional independencies that is closed under marginalization and arises naturally from causal models which allow for unmeasured confounding. Monte Carlo methods and a variational approximation for such models are presented. Our algorithms for Bayesian inference allow the evaluation of posterior distributions for several quantities of interest, including causal effects that are not identifiable from data alone but could otherwise be inferred where informative prior knowledge about confounding is available.
1206.6875
A simple approach for finding the globally optimal Bayesian network structure
cs.AI
We study the problem of learning the best Bayesian network structure with respect to a decomposable score such as BDe, BIC or AIC. This problem is known to be NP-hard, which means that solving it becomes quickly infeasible as the number of variables increases. Nevertheless, in this paper we show that it is possible to learn the best Bayesian network structure with over 30 variables, which covers many practically interesting cases. Our algorithm is less complicated and more efficient than the techniques presented earlier. It can be easily parallelized, and offers a possibility for efficient exploration of the best networks consistent with different variable orderings. In the experimental part of the paper we compare the performance of the algorithm to the previous state-of-the-art algorithm. Free source-code and an online-demo can be found at http://b-course.hiit.fi/bene.