JuIm/Biological_Process · Datasets at Hugging Face

text stringlengths 7 1.01k
molybdate ion transport response to chromate tungstate ion transport
glyoxylate catabolic process glyoxylate cycle tricarboxylic acid cycle
L-lysine catabolic process lysine catabolic process
cellular response to reactive oxygen species dipeptide transmembrane transport protein transport response to antibiotic sodium ion transport xenobiotic detoxification by transmembrane export across the plasma membrane xenobiotic transmembrane transport xenobiotic transport
negative regulation of DNA-templated transcription phosphorelay signal transduction system positive regulation of DNA-templated transcription regulation of cellular response to stress regulation of DNA-templated transcription
carbohydrate phosphorylation DNA damage response glycerol catabolic process phosphoenolpyruvate-dependent sugar phosphotransferase system pyruvate metabolic process
activation of protein kinase B activity cellular detoxification cellular response to cadmium ion cellular response to copper ion cellular response to reactive oxygen species cellular response to zinc ion detoxification of copper ion energy reserve metabolic process intracellular zinc ion homeostasis leptin-mediated signaling pathway negative regulation of axon extension negative regulation of cell growth negative regulation of neuron apoptotic process negative regulation of oxidoreductase activity positive regulation of DNA-templated transcription positive regulation of ERK1 and ERK2 cascade positive regulation of gene expression positive regulation of oxygen metabolic process positive regulation of protein phosphorylation positive regulation of vascular endothelial growth factor receptor signaling pathway protein stabilization regulation of response to food removal of superoxide radicals response to hypoxia sequestering of metal ion zinc ion transport
activation of protein kinase B activity cellular detoxification cellular response to cadmium ion cellular response to copper ion cellular response to reactive oxygen species cellular response to zinc ion detoxification of copper ion energy reserve metabolic process intracellular zinc ion homeostasis leptin-mediated signaling pathway negative regulation of axon extension negative regulation of cell growth negative regulation of neuron apoptotic process negative regulation of oxidoreductase activity positive regulation of DNA-templated transcription positive regulation of ERK1 and ERK2 cascade positive regulation of gene expression positive regulation of oxygen metabolic process positive regulation of protein phosphorylation positive regulation of vascular endothelial growth factor receptor signaling pathway protein stabilization regulation of response to food removal of superoxide radicals response to hypoxia sequestering of metal ion zinc ion transport
cellular response to nitrogen starvation nucleotide-excision repair positive regulation of Atg1/ULK1 kinase complex assembly positive regulation of autophagy regulation of transcription by RNA polymerase II transcription by RNA polymerase II transcription initiation at RNA polymerase II promoter
actin cortical patch localization bipolar cellular bud site selection endocytosis positive regulation of Arp2/3 complex-mediated actin nucleation regulation of cytokinesis
cellular response to camptothecin cellular response to hydroxyurea cellular response to ionizing radiation chromosome organization involved in meiotic cell cycle DNA damage response DNA recombinase assembly DNA repair DNA strand invasion DNA unwinding involved in DNA replication double-strand break repair involved in meiotic recombination double-strand break repair via homologous recombination interstrand cross-link repair meiotic cell cycle mitotic recombination mitotic recombination-dependent replication fork processing positive regulation of DNA ligation reciprocal meiotic recombination regulation of double-strand break repair via homologous recombination regulation of protein phosphorylation replication-born double-strand break repair via sister chromatid exchange telomere maintenance via recombination telomere maintenance via telomere lengthening
actin filament organization actomyosin structure organization epithelial cell differentiation
leucine biosynthetic process
propanediol catabolic process
propanediol catabolic process
cell cycle cell division protein catabolic process proteolysis sporulation
sporulation resulting in formation of a cellular spore
glutamine catabolic process pyridoxal phosphate biosynthetic process pyridoxine metabolic process
phosphorylation
phosphorylation
ribosome biogenesis rRNA processing
2-oxobutyrate biosynthetic process isoleucine biosynthetic process organonitrogen compound catabolic process response to toxic substance
coenzyme A biosynthetic process phosphorylation
phosphocreatine biosynthetic process phosphorylation
DNA repair second-messenger-mediated signaling
protein autoprocessing
protein homotetramerization sulfur compound metabolic process taurine catabolic process
cadmium ion transmembrane transport detoxification of zinc ion intracellular zinc ion homeostasis lead ion transport metal ion transport response to cadmium ion response to lead ion response to zinc ion transmembrane transport zinc ion transmembrane transport zinc ion transport
positive regulation of translation
carbon utilization rRNA base methylation
D-galacturonate catabolic process D-glucuronate catabolic process DNA damage response
bacterial cellulose biosynthetic process UDP-glucose metabolic process
D-gluconate metabolic process ketogluconate catabolic process
glucose catabolic process glycolytic process response to oxidative stress
cell cycle peptidoglycan-based cell wall biogenesis response to radiation response to xenobiotic stimulus septum digestion after cytokinesis
abscisic acid-activated signaling pathway carbohydrate metabolic process defense response to insect glucosinolate catabolic process regulation of stomatal movement response to abscisic acid response to insect
blood vessel development intracellular protein transport protein geranylgeranylation protein targeting to membrane small GTPase mediated signal transduction vesicle-mediated transport
dTDP-rhamnose biosynthetic process extracellular polysaccharide biosynthetic process O antigen biosynthetic process protein homotetramerization
DNA damage response dTDP-rhamnose biosynthetic process extracellular polysaccharide biosynthetic process lipopolysaccharide biosynthetic process O antigen biosynthetic process response to antibiotic response to UV
lipopolysaccharide biosynthetic process
nitrate assimilation
cell cycle cell division cell wall organization peptidoglycan biosynthetic process peptidoglycan turnover regulation of cell shape
cysteine transmembrane transport L-cystine transport
chitin catabolic process diacetylchitobiose catabolic process polysaccharide catabolic process
actin filament organization epithelial cell differentiation
actin filament bundle assembly actin filament organization actomyosin structure organization myosin filament assembly negative regulation of muscle filament sliding
proton motive force-driven ATP synthesis
carbohydrate metabolic process fructose 6-phosphate metabolic process pentose-phosphate shunt, non-oxidative branch
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ribosomal large subunit biogenesis
glycolytic process sporulation resulting in formation of a cellular spore
diadenosine tetraphosphate biosynthetic process lysyl-tRNA aminoacylation
cysteine biosynthetic process from serine methionine catabolic process positive regulation of cell population proliferation positive regulation of core promoter binding
base-excision repair cell division DNA biosynthetic process DNA ligation DNA recombination DNA repair DNA replication double-strand break repair via nonhomologous end joining lagging strand elongation Okazaki fragment processing involved in mitotic DNA replication response to hydrogen peroxide
cellular response to heat protein quality control for misfolded or incompletely synthesized proteins
DNA repair sporulation resulting in formation of a cellular spore
lipid catabolic process
cell wall organization glycerol metabolic process lipid metabolic process
cilium assembly Golgi to plasma membrane transport intraciliary transport kidney development mitotic cytokinesis photoreceptor cell development post-Golgi vesicle-mediated transport protein localization to ciliary membrane protein localization to cilium protein transport small GTPase mediated signal transduction smoothened signaling pathway
cell-cell adhesion heterotypic cell-cell adhesion natural killer cell activation natural killer cell mediated cytotoxicity positive regulation of interleukin-8 production positive regulation of tumor necrosis factor production positive regulation of type II interferon production
de novo' IMP biosynthetic process purine nucleotide biosynthetic process
cytoplasmic translation G protein-coupled receptor signaling pathway mRNA destabilization negative regulation of gene expression negative regulation of glucose mediated signaling pathway negative regulation of translation negative regulation of translational frameshifting positive regulation of protein phosphorylation rescue of stalled ribosome ribosome-associated ubiquitin-dependent protein catabolic process
cell redox homeostasis cellular response to oxidative stress hydrogen peroxide catabolic process response to metal ion
de novo' NAD biosynthetic process from aspartate
cysteine biosynthetic process hydrogen sulfide biosynthetic process sulfate assimilation
apical protein localization asymmetric neuroblast division cell adhesion involved in heart morphogenesis convergent extension involved in gastrulation dorsal closure embryonic heart tube development establishment or maintenance of cytoskeleton polarity involved in gastrulation G protein-coupled receptor signaling pathway heart process mesectoderm development proboscis extension reflex regulation of gastrulation regulation of myosin II filament organization
actin filament organization budding cell apical bud growth endosome organization receptor recycling retrograde transport, endosome to Golgi septum digestion after cytokinesis
cell wall organization peptidoglycan biosynthetic process proteolysis regulation of cell shape response to antibiotic
acyl-CoA metabolic process ketone body biosynthetic process leucine catabolic process lipid metabolic process mitochondrion organization
N-terminal protein amino acid modification peptidyl-methionine modification protein processing
5-phosphoribose 1-diphosphate biosynthetic process fungal-type cell wall organization phosphorylation purine nucleotide biosynthetic process ribonucleoside monophosphate biosynthetic process
mannan biosynthetic process protein glycosylation protein mannosylation
peptidyl-serine phosphorylation protein autophosphorylation
aerobic respiration fatty acid biosynthetic process fatty acid metabolic process
folic acid biosynthetic process mRNA export from nucleus negative regulation of termination of DNA-templated transcription peptidyl-arginine methylation positive regulation of transcription elongation by RNA polymerase II
pyridoxal 5'-phosphate salvage pyridoxine biosynthetic process
proton motive force-driven ATP synthesis
amino acid transmembrane transport amino acid transport leucine import across plasma membrane transmembrane transport
amino acid transmembrane transport amino acid transport transmembrane transport tryptophan transport tyrosine transport
DNA duplex unwinding DNA geometric change DNA recombination DNA repair double-strand break repair via homologous recombination heteroduplex formation meiotic sister chromatid segregation reciprocal meiotic recombination
diadenosine tetraphosphate biosynthetic process DNA-templated transcription termination glycyl-tRNA aminoacylation mitochondrial glycyl-tRNA aminoacylation
autolysis conidium formation nitrogen compound metabolic process positive regulation of conidium formation positive regulation of sterigmatocystin biosynthetic process regulation of secondary metabolite biosynthetic process regulation of sterigmatocystin biosynthetic process sporocarp development involved in asexual reproduction sporulation resulting in formation of a cellular spore sterigmatocystin biosynthetic process
macroautophagy phytochelatin biosynthetic process zymogen activation
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ribosomal large subunit biogenesis
carbohydrate metabolic process
cytoplasm to vacuole transport by the Cvt pathway endocytosis Golgi to plasma membrane protein transport intracellular protein transport macroautophagy protein localization to Golgi apparatus protein localization to phagophore assembly site protein targeting to vacuole protein-containing complex localization response to endoplasmic reticulum stress trans-Golgi network membrane organization vesicle-mediated transport
amino acid catabolic process fatty acid beta-oxidation using acyl-CoA dehydrogenase respiratory electron transport chain
DNA biosynthetic process DNA replication initiation telomere capping
regulation of meiotic DNA double-strand break formation subtelomeric heterochromatin formation telomere maintenance
positive regulation of transcription by RNA polymerase II
chromatin organization positive regulation of transcription by RNA polymerase II regulation of transcription by RNA polymerase II transcription by RNA polymerase II transcription initiation at RNA polymerase II promoter
cell wall mannoprotein biosynthetic process mannosylation N-glycan processing protein N-linked glycosylation protein O-linked glycosylation
DNA replication initiation DNA strand elongation involved in DNA replication DNA unwinding involved in DNA replication double-strand break repair via break-induced replication nuclear DNA replication pre-replicative complex assembly involved in nuclear cell cycle DNA replication premeiotic DNA replication silent mating-type cassette heterochromatin formation subtelomeric heterochromatin formation
fatty acid beta-oxidation
fatty acid metabolic process oxalate catabolic process
fungal-type cell wall beta-glucan biosynthetic process N-glycan processing polysaccharide biosynthetic process
acylglycerol catabolic process lipid homeostasis
cellular response to starvation gluconeogenesis negative regulation of transcription by RNA polymerase II negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source positive regulation of transcription by RNA polymerase II positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source
cellular response to oxidative stress
Golgi organization intracellular protein transport
glutathione catabolic process proteolysis

molybdate ion transport response to chromate tungstate ion transport

glyoxylate catabolic process glyoxylate cycle tricarboxylic acid cycle

L-lysine catabolic process lysine catabolic process

cellular response to reactive oxygen species dipeptide transmembrane transport protein transport response to antibiotic sodium ion transport xenobiotic detoxification by transmembrane export across the plasma membrane xenobiotic transmembrane transport xenobiotic transport

negative regulation of DNA-templated transcription phosphorelay signal transduction system positive regulation of DNA-templated transcription regulation of cellular response to stress regulation of DNA-templated transcription

carbohydrate phosphorylation DNA damage response glycerol catabolic process phosphoenolpyruvate-dependent sugar phosphotransferase system pyruvate metabolic process

activation of protein kinase B activity cellular detoxification cellular response to cadmium ion cellular response to copper ion cellular response to reactive oxygen species cellular response to zinc ion detoxification of copper ion energy reserve metabolic process intracellular zinc ion homeostasis leptin-mediated signaling pathway negative regulation of axon extension negative regulation of cell growth negative regulation of neuron apoptotic process negative regulation of oxidoreductase activity positive regulation of DNA-templated transcription positive regulation of ERK1 and ERK2 cascade positive regulation of gene expression positive regulation of oxygen metabolic process positive regulation of protein phosphorylation positive regulation of vascular endothelial growth factor receptor signaling pathway protein stabilization regulation of response to food removal of superoxide radicals response to hypoxia sequestering of metal ion zinc ion transport

cellular response to nitrogen starvation nucleotide-excision repair positive regulation of Atg1/ULK1 kinase complex assembly positive regulation of autophagy regulation of transcription by RNA polymerase II transcription by RNA polymerase II transcription initiation at RNA polymerase II promoter

actin cortical patch localization bipolar cellular bud site selection endocytosis positive regulation of Arp2/3 complex-mediated actin nucleation regulation of cytokinesis

cellular response to camptothecin cellular response to hydroxyurea cellular response to ionizing radiation chromosome organization involved in meiotic cell cycle DNA damage response DNA recombinase assembly DNA repair DNA strand invasion DNA unwinding involved in DNA replication double-strand break repair involved in meiotic recombination double-strand break repair via homologous recombination interstrand cross-link repair meiotic cell cycle mitotic recombination mitotic recombination-dependent replication fork processing positive regulation of DNA ligation reciprocal meiotic recombination regulation of double-strand break repair via homologous recombination regulation of protein phosphorylation replication-born double-strand break repair via sister chromatid exchange telomere maintenance via recombination telomere maintenance via telomere lengthening

actin filament organization actomyosin structure organization epithelial cell differentiation

leucine biosynthetic process

propanediol catabolic process

cell cycle cell division protein catabolic process proteolysis sporulation

sporulation resulting in formation of a cellular spore

glutamine catabolic process pyridoxal phosphate biosynthetic process pyridoxine metabolic process

phosphorylation

ribosome biogenesis rRNA processing

2-oxobutyrate biosynthetic process isoleucine biosynthetic process organonitrogen compound catabolic process response to toxic substance

coenzyme A biosynthetic process phosphorylation

phosphocreatine biosynthetic process phosphorylation

DNA repair second-messenger-mediated signaling

protein autoprocessing

protein homotetramerization sulfur compound metabolic process taurine catabolic process

cadmium ion transmembrane transport detoxification of zinc ion intracellular zinc ion homeostasis lead ion transport metal ion transport response to cadmium ion response to lead ion response to zinc ion transmembrane transport zinc ion transmembrane transport zinc ion transport

positive regulation of translation

carbon utilization rRNA base methylation

D-galacturonate catabolic process D-glucuronate catabolic process DNA damage response

bacterial cellulose biosynthetic process UDP-glucose metabolic process

D-gluconate metabolic process ketogluconate catabolic process

glucose catabolic process glycolytic process response to oxidative stress

cell cycle peptidoglycan-based cell wall biogenesis response to radiation response to xenobiotic stimulus septum digestion after cytokinesis

abscisic acid-activated signaling pathway carbohydrate metabolic process defense response to insect glucosinolate catabolic process regulation of stomatal movement response to abscisic acid response to insect

blood vessel development intracellular protein transport protein geranylgeranylation protein targeting to membrane small GTPase mediated signal transduction vesicle-mediated transport

dTDP-rhamnose biosynthetic process extracellular polysaccharide biosynthetic process O antigen biosynthetic process protein homotetramerization

DNA damage response dTDP-rhamnose biosynthetic process extracellular polysaccharide biosynthetic process lipopolysaccharide biosynthetic process O antigen biosynthetic process response to antibiotic response to UV

lipopolysaccharide biosynthetic process

nitrate assimilation

cell cycle cell division cell wall organization peptidoglycan biosynthetic process peptidoglycan turnover regulation of cell shape

cysteine transmembrane transport L-cystine transport

chitin catabolic process diacetylchitobiose catabolic process polysaccharide catabolic process

actin filament organization epithelial cell differentiation

actin filament bundle assembly actin filament organization actomyosin structure organization myosin filament assembly negative regulation of muscle filament sliding

proton motive force-driven ATP synthesis

carbohydrate metabolic process fructose 6-phosphate metabolic process pentose-phosphate shunt, non-oxidative branch

maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ribosomal large subunit biogenesis

glycolytic process sporulation resulting in formation of a cellular spore

diadenosine tetraphosphate biosynthetic process lysyl-tRNA aminoacylation

cysteine biosynthetic process from serine methionine catabolic process positive regulation of cell population proliferation positive regulation of core promoter binding

base-excision repair cell division DNA biosynthetic process DNA ligation DNA recombination DNA repair DNA replication double-strand break repair via nonhomologous end joining lagging strand elongation Okazaki fragment processing involved in mitotic DNA replication response to hydrogen peroxide

cellular response to heat protein quality control for misfolded or incompletely synthesized proteins

DNA repair sporulation resulting in formation of a cellular spore

lipid catabolic process

cell wall organization glycerol metabolic process lipid metabolic process

cilium assembly Golgi to plasma membrane transport intraciliary transport kidney development mitotic cytokinesis photoreceptor cell development post-Golgi vesicle-mediated transport protein localization to ciliary membrane protein localization to cilium protein transport small GTPase mediated signal transduction smoothened signaling pathway

cell-cell adhesion heterotypic cell-cell adhesion natural killer cell activation natural killer cell mediated cytotoxicity positive regulation of interleukin-8 production positive regulation of tumor necrosis factor production positive regulation of type II interferon production

de novo' IMP biosynthetic process purine nucleotide biosynthetic process

cytoplasmic translation G protein-coupled receptor signaling pathway mRNA destabilization negative regulation of gene expression negative regulation of glucose mediated signaling pathway negative regulation of translation negative regulation of translational frameshifting positive regulation of protein phosphorylation rescue of stalled ribosome ribosome-associated ubiquitin-dependent protein catabolic process

cell redox homeostasis cellular response to oxidative stress hydrogen peroxide catabolic process response to metal ion

de novo' NAD biosynthetic process from aspartate

cysteine biosynthetic process hydrogen sulfide biosynthetic process sulfate assimilation

apical protein localization asymmetric neuroblast division cell adhesion involved in heart morphogenesis convergent extension involved in gastrulation dorsal closure embryonic heart tube development establishment or maintenance of cytoskeleton polarity involved in gastrulation G protein-coupled receptor signaling pathway heart process mesectoderm development proboscis extension reflex regulation of gastrulation regulation of myosin II filament organization

actin filament organization budding cell apical bud growth endosome organization receptor recycling retrograde transport, endosome to Golgi septum digestion after cytokinesis

cell wall organization peptidoglycan biosynthetic process proteolysis regulation of cell shape response to antibiotic

acyl-CoA metabolic process ketone body biosynthetic process leucine catabolic process lipid metabolic process mitochondrion organization

N-terminal protein amino acid modification peptidyl-methionine modification protein processing

5-phosphoribose 1-diphosphate biosynthetic process fungal-type cell wall organization phosphorylation purine nucleotide biosynthetic process ribonucleoside monophosphate biosynthetic process

mannan biosynthetic process protein glycosylation protein mannosylation

peptidyl-serine phosphorylation protein autophosphorylation

aerobic respiration fatty acid biosynthetic process fatty acid metabolic process

folic acid biosynthetic process mRNA export from nucleus negative regulation of termination of DNA-templated transcription peptidyl-arginine methylation positive regulation of transcription elongation by RNA polymerase II

pyridoxal 5'-phosphate salvage pyridoxine biosynthetic process

proton motive force-driven ATP synthesis

amino acid transmembrane transport amino acid transport leucine import across plasma membrane transmembrane transport

amino acid transmembrane transport amino acid transport transmembrane transport tryptophan transport tyrosine transport

DNA duplex unwinding DNA geometric change DNA recombination DNA repair double-strand break repair via homologous recombination heteroduplex formation meiotic sister chromatid segregation reciprocal meiotic recombination

diadenosine tetraphosphate biosynthetic process DNA-templated transcription termination glycyl-tRNA aminoacylation mitochondrial glycyl-tRNA aminoacylation

autolysis conidium formation nitrogen compound metabolic process positive regulation of conidium formation positive regulation of sterigmatocystin biosynthetic process regulation of secondary metabolite biosynthetic process regulation of sterigmatocystin biosynthetic process sporocarp development involved in asexual reproduction sporulation resulting in formation of a cellular spore sterigmatocystin biosynthetic process

macroautophagy phytochelatin biosynthetic process zymogen activation

maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) ribosomal large subunit biogenesis

carbohydrate metabolic process

cytoplasm to vacuole transport by the Cvt pathway endocytosis Golgi to plasma membrane protein transport intracellular protein transport macroautophagy protein localization to Golgi apparatus protein localization to phagophore assembly site protein targeting to vacuole protein-containing complex localization response to endoplasmic reticulum stress trans-Golgi network membrane organization vesicle-mediated transport

amino acid catabolic process fatty acid beta-oxidation using acyl-CoA dehydrogenase respiratory electron transport chain

DNA biosynthetic process DNA replication initiation telomere capping

regulation of meiotic DNA double-strand break formation subtelomeric heterochromatin formation telomere maintenance

positive regulation of transcription by RNA polymerase II

chromatin organization positive regulation of transcription by RNA polymerase II regulation of transcription by RNA polymerase II transcription by RNA polymerase II transcription initiation at RNA polymerase II promoter

cell wall mannoprotein biosynthetic process mannosylation N-glycan processing protein N-linked glycosylation protein O-linked glycosylation

DNA replication initiation DNA strand elongation involved in DNA replication DNA unwinding involved in DNA replication double-strand break repair via break-induced replication nuclear DNA replication pre-replicative complex assembly involved in nuclear cell cycle DNA replication premeiotic DNA replication silent mating-type cassette heterochromatin formation subtelomeric heterochromatin formation

fatty acid beta-oxidation

fatty acid metabolic process oxalate catabolic process

fungal-type cell wall beta-glucan biosynthetic process N-glycan processing polysaccharide biosynthetic process

acylglycerol catabolic process lipid homeostasis

cellular response to starvation gluconeogenesis negative regulation of transcription by RNA polymerase II negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source positive regulation of transcription by RNA polymerase II positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon source

cellular response to oxidative stress

Golgi organization intracellular protein transport

glutathione catabolic process proteolysis