Biological Process stringlengths 7 1.01k | Cellular Component stringlengths 6 867 | Molecular Function stringlengths 11 871 | Organism stringlengths 8 73 | Keywords stringlengths 1 810 | Sequence 10 stringlengths 5 10 | Sequence stringlengths 5 1.02k | Combined stringlengths 136 3.91k |
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translation | cytoplasm; ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MRELIRLVSS | MRELIRLVSSAGTGHFYTTDKNKRTTPDKIEIKKYDPVVRKHVVYKEAKIK | translation cytoplasm; ribonucleoprotein complex; ribosome structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MRELIRLVSS MRELIRLVSSAGTGHFYTTDKNKRTTPDKIEIKKYDPVVRKHVVYKEAKIK |
monoatomic ion transport | plasma membrane | antiporter activity xenobiotic transmembrane transporter activity | Pseudomonas putida | Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport | MHVAPTTELK | MHVAPTTELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAASYSFVSIFCLGVIAAVGTLVAIRKGANDIEGATRLAQNGLWLAWALALFAALVLWNLEPVLLLFGQKPENVASAAEFLTLLPLALPGYLTFMALRGFTSALGRSTPVMVISLFGTVLNYLFNVALIEGMFGLPKLGLMGIGLVTAVVSMGMATALALYIRWHPAYTAYPLRKGLSRPSLAALRELWRLGLPIGGTYMVEVGLFAFAALCMGVLGSTELAAHQIALQIVSTAFMVPTGLSYAVTMRVGLYYGAGNLLAARSAGRVGIG... | monoatomic ion transport plasma membrane antiporter activity xenobiotic transmembrane transporter activity Pseudomonas putida Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport MHVAPTTELK MHVAPTTELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLGAAS... |
cell division chromosome segregation DNA transposition | cytoplasm | DNA binding tyrosine-based site-specific recombinase activity | Pseudomonas putida | Cell cycle Cell division Chromosome partition Cytoplasm DNA integration DNA recombination DNA-binding Reference proteome | MKRQLEAYCA | MKRQLEAYCAHLRNERQVSEHTSQGYRRDLEKVIAYCEEHGIADWQALQIQQLRQLIARLHHHGQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLLDGGVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAREALQAWYRLRGIGNPRDRAVFITRQGNRISPRAVRLRVKVAGERELGQHLHPHMLRHSFASHVLESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPRAKRSKGTDS | cell division chromosome segregation DNA transposition cytoplasm DNA binding tyrosine-based site-specific recombinase activity Pseudomonas putida Cell cycle Cell division Chromosome partition Cytoplasm DNA integration DNA recombination DNA-binding Reference proteome MKRQLEAYCA MKRQLEAYCAHLRNERQVSEHTSQGYRRDLEKVIAYCEEHGI... |
iron-sulfur cluster assembly | cytoplasm | ferric iron binding | Pseudomonas putida | Iron Metal-binding Reference proteome | MSLSEARFHD | MSLSEARFHDLVDATQQALEDLFDESGLDLDMENSAGVLTVKFEGGAQLIFSRQEPLRQLWLADRSGGFHFDYDEDSGKWVCEKSEELLGEMLERIVWERAGEKLDFDEI | iron-sulfur cluster assembly cytoplasm ferric iron binding Pseudomonas putida Iron Metal-binding Reference proteome MSLSEARFHD MSLSEARFHDLVDATQQALEDLFDESGLDLDMENSAGVLTVKFEGGAQLIFSRQEPLRQLWLADRSGGFHFDYDEDSGKWVCEKSEELLGEMLERIVWERAGEKLDFDEI |
lipoprotein biosynthetic process | plasma membrane | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity | Pseudomonas putida | Cell inner membrane Cell membrane Membrane Reference proteome Transferase Transmembrane Transmembrane helix | MLPYPQIDPV | MLPYPQIDPVALAIGPLKIHWYGLMYLIGIGGAWLLASRRLNRFDPTWNREKLSDLVFWLSMGVIVGGRLGYVLFYDLHAYLANPTLIFEVWKGGMSFHGGFIGVMLAALWFGKRNNKSFFELMDFVAPLVPIGLGAGRIGNFINAELWGKPTDVPWAMIFPPFSDPAQLPRHPSQLYQFALEGVALFVILWLFSRKPRPTMAVSGMFSLCYGIFRFAVEFVRVPDAQLGYIAFGWLTQGQLLCIPMIVGGLVLIWWAYNRKPTAKPA | lipoprotein biosynthetic process plasma membrane phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity Pseudomonas putida Cell inner membrane Cell membrane Membrane Reference proteome Transferase Transmembrane Transmembrane helix MLPYPQIDPV MLPYPQIDPVALAIGPLKIHWYGLMYLIGIGGAWLLASRRLNRFDPTWNREKLSDLVFWLS... |
arginyl-tRNA aminoacylation | cytoplasm | arginine-tRNA ligase activity ATP binding | Pseudomonas putida | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MKDTIRQLIQ | MKDTIRQLIQQALTQLVTDGVLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNFFQNTDALANRLDAALADAHLGARKAGPAQKVVIDMSAPNLAKEMHVGHLRSTIIGDSVARVLEFLGDNVIRQNHVGDWGTQFGMLMAYLQENPITSDELSDLENFYRAAKKRFDESEEFATRARGLVVKLQAGDPECLALWTRFKDISLSHCQKTYELLNVKLTMADVMGESAYNDDLANVVADLKAKGLLVEDQGAQCVFLEEFKNSDGDPLPVIVQKADGGYLYATTDL... | arginyl-tRNA aminoacylation cytoplasm arginine-tRNA ligase activity ATP binding Pseudomonas putida Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MKDTIRQLIQ MKDTIRQLIQQALTQLVTDGVLPEGLSPAIQVENARDKTHGDFASNIAMMLAKPAGMKPRDLAEKLINALPASADISKVEIAGPGFLNFFQNTDAL... |
protein folding protein tetramerization protein transport | cytoplasm | unfolded protein binding | Pseudomonas putida | Chaperone Cytoplasm Protein transport Reference proteome Translocation Transport | MTDQQTNGAA | MTDQQTNGAAAEDNSPQFSLQRIYVRDLSFEAPKSPQIFRQTWEPSVALDLNTKQKSLEGDFHEVVLTLSVTVKNGDEVAFIAEVQQAGIFLIANLDAPSMSHTLGAFCPNILFPYAREALDSLVTRGSFPALMLSPVNFDALYAQEMQRMQEAGEAPTVQ | protein folding protein tetramerization protein transport cytoplasm unfolded protein binding Pseudomonas putida Chaperone Cytoplasm Protein transport Reference proteome Translocation Transport MTDQQTNGAA MTDQQTNGAAAEDNSPQFSLQRIYVRDLSFEAPKSPQIFRQTWEPSVALDLNTKQKSLEGDFHEVVLTLSVTVKNGDEVAFIAEVQQAGIFLIANLDAPSMSHTLGAFCPNILFPY... |
histidine catabolic process to glutamate and formamide histidine catabolic process to glutamate and formate | cytoplasm | histidine ammonia-lyase activity | Pseudomonas putida | Cytoplasm Histidine metabolism Lyase Reference proteome | MTELTLKPGT | MTELTLKPGTLTLAQLRAIHAAPVRLQLDASAAPAIDASVACVEQIIAEDRTAYGINTGFGLLASTRIASHDLENLQRSLVLSHAAGIGAPLDDDLVRLIMVLKINSLSRGFSGIRRKVIDALIALVNAEVYPHIPLKGSVGASGDLAPLAHMSLVLLGEGKARYKGQWLPATEALAIAGLEPLTLAAKEGLALLNGTQASTAYALRGLFQAEDLYAAAIACGGLSVEAALGSRSPFDARVHEVRGQRGQIDTAACFRDLLGDSSEVSLSHKNCDKVQDPYSLRCQPQVMGACLTQLRQAAEVLGIEANAVSDNPLVFAA... | histidine catabolic process to glutamate and formamide histidine catabolic process to glutamate and formate cytoplasm histidine ammonia-lyase activity Pseudomonas putida Cytoplasm Histidine metabolism Lyase Reference proteome MTELTLKPGT MTELTLKPGTLTLAQLRAIHAAPVRLQLDASAAPAIDASVACVEQIIAEDRTAYGINTGFGLLASTRIASHDLENLQRSLVLS... |
glucan biosynthetic process | periplasmic space | carbohydrate binding catalytic activity | Pseudomonas putida | Periplasm Reference proteome Signal | MASVALVGLM | MASVALVGLMSAGQLWAFNLDDVAAKAKDLAGQKYEAPKSNLPAVFRDMKFADYQKIRFLQEKAEWAKDKTPFKLSFYHQGMHFDTPVKINEVTATKVEEIKYDPDRFEFGDVPHDPETTKNLGYAGFRVLYPINKADKQDEIMTLLGASYFRVVGKGHVYGLSARGLAIDTALPSGEEFPRFTEFWVEKPKPADKHLVIYALLDSPRSTGAYKLTLRPGNDTVVDVQSRVFLRDHVSRLGIAPLTSMYLFGPNQPSKVLNYRPALHDSEGLSIHAGNGEWLWRPLNNPKHLAVSNFSVENPRGFGLMQRQRAFSDYEDL... | glucan biosynthetic process periplasmic space carbohydrate binding catalytic activity Pseudomonas putida Periplasm Reference proteome Signal MASVALVGLM MASVALVGLMSAGQLWAFNLDDVAAKAKDLAGQKYEAPKSNLPAVFRDMKFADYQKIRFLQEKAEWAKDKTPFKLSFYHQGMHFDTPVKINEVTATKVEEIKYDPDRFEFGDVPHDPETTKNLGYAGFRVLYPINKADKQDEIMTLLGASYFRVVGKGHVYGLSARGL... |
glucan biosynthetic process | plasma membrane | hexosyltransferase activity | Pseudomonas putida | Cell inner membrane Cell membrane Glycosyltransferase Membrane Reference proteome Transferase Transmembrane Transmembrane helix | MSNSSARPES | MSNSSARPESLGEYLAHLPLSDEQRAELASCTSFSELHQRLAANPAASSAEAVQASVGPRLTVGSAAELEEAEMLGVDGSGRLCLKIAPPIKRTKVVPEPWRTNVLIRMWRRMTGRPNAPQPPKRELPPARWRTVGSIRRYILLALMIGQTIVAGWYMKGILPYQGWSFVDFDEIVNQPLWDTVVQVWPYALQTSILILFGILFCWVSAGFWTALMGFLELLTGRDKYKISGSSAGNEPIAPEARTALVMPICNEDVPRVFAGLRATFESVAASGNLDRFDFFVLSDTNDTDIAVAEQQAWLDVCRETKGFGRIFYRRRR... | glucan biosynthetic process plasma membrane hexosyltransferase activity Pseudomonas putida Cell inner membrane Cell membrane Glycosyltransferase Membrane Reference proteome Transferase Transmembrane Transmembrane helix MSNSSARPES MSNSSARPESLGEYLAHLPLSDEQRAELASCTSFSELHQRLAANPAASSAEAVQASVGPRLTVGSAAELEEAEMLGVDGSGRLCLKIAPP... |
histidine biosynthetic process | cytoplasm | ATP binding phosphoribosyl-ATP diphosphatase activity | Pseudomonas putida | Amino-acid biosynthesis ATP-binding Cytoplasm Histidine biosynthesis Hydrolase Nucleotide-binding Reference proteome | MSDTLNRLAE | MSDTLNRLAEVLEERKQAAPDSSYVASLYHKGLNKILEKLGEESVETIIAAKDAQISKDYSDVIYETADLWFHSLVMLSALGQHPQAVLDELERRFGLSGHDEKAARQPSA | histidine biosynthetic process cytoplasm ATP binding phosphoribosyl-ATP diphosphatase activity Pseudomonas putida Amino-acid biosynthesis ATP-binding Cytoplasm Histidine biosynthesis Hydrolase Nucleotide-binding Reference proteome MSDTLNRLAE MSDTLNRLAEVLEERKQAAPDSSYVASLYHKGLNKILEKLGEESVETIIAAKDAQISKDYSDVIYETADLWFHSLVML... |
protein unfolding | HslUV protease complex | ATP binding ATP hydrolysis activity peptidase activity proteasome-activating activity | Pseudomonas putida | ATP-binding Chaperone Cytoplasm Nucleotide-binding Reference proteome | MSMTPREIVH | MSMTPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELRAEVTPKNILMIGPTGVGKTEIARRLAKLANAPFLKVEATKFTEVGYVGRDVESIIRDLADAALKMLREQEIIRVRHRAEDAAEDRILDALLPQARVTSFSEEAAQTSSDSNTRQLFRKRLREGQLDDKEIEIEVADAVGVEIAAPPGMEEMTNQLQSLFANMGKGKRKARKLKVKEALKMVRDEEASRLVNEEELKAKALEAVEQHGIVFIDEIDKVAKRGNVGGADVSREGVQRDLLPLIEGCTVNTKLGMVKTDHILFIASGAFHLSKPSDLVP... | protein unfolding HslUV protease complex ATP binding ATP hydrolysis activity peptidase activity proteasome-activating activity Pseudomonas putida ATP-binding Chaperone Cytoplasm Nucleotide-binding Reference proteome MSMTPREIVH MSMTPREIVHELNRHIIGQDDAKRAVAIALRNRWRRMQLPAELRAEVTPKNILMIGPTGVGKTEIARRLAKLANAPFLKVEATKFTEVGYVGR... |
rRNA 5'-end processing | cytoplasm | nuclease activity | Pseudomonas putida | Cytoplasm Hydrolase Nuclease Reference proteome Ribosome biogenesis | MADLRLLLGF | MADLRLLLGFDYGSKQIGVAVGQVITGQARELCTLKAQNGVPDWAQVEKLIAEWKPDAIVVGLPLNMDGTPSEMSARAEKFARRLNGRFNLPVHTHDERLTTFEAKGERMARGGQRGSYRDNPVDAIAAALLLQGWLEANT | rRNA 5'-end processing cytoplasm nuclease activity Pseudomonas putida Cytoplasm Hydrolase Nuclease Reference proteome Ribosome biogenesis MADLRLLLGF MADLRLLLGFDYGSKQIGVAVGQVITGQARELCTLKAQNGVPDWAQVEKLIAEWKPDAIVVGLPLNMDGTPSEMSARAEKFARRLNGRFNLPVHTHDERLTTFEAKGERMARGGQRGSYRDNPVDAIAAALLLQGWLEANT |
glycolytic process phosphorylation | cytoplasm | ATP binding phosphoglycerate kinase activity | Pseudomonas putida | ATP-binding Cytoplasm Glycolysis Kinase Nucleotide-binding Reference proteome Transferase | MTVLKMTDLD | MTVLKMTDLDLQGKRVLIREDLNVPVKDGVVASDARILAALPTIKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVADYLSKALGRDVPLVADYLDGVAVQAGELVLFENVRFNKGEKKNADELAQKYAALCDVFVMDAFGTAHRAEGSTHGVAKFAKVAAAGPLLAAELDALGKALKAPAKPMAAIVAGSKVSTKLDVLNSLSSVCDQLIVGGGIANTFLAAAGHPVGKSLYEPDLVDTAKAIAAKVSVPLPVDVVVAKEFAESAEATVKAIADVAADDMILDIGPQTAANFAELLKSSKTILWNGPVGVFEFDQFGN... | glycolytic process phosphorylation cytoplasm ATP binding phosphoglycerate kinase activity Pseudomonas putida ATP-binding Cytoplasm Glycolysis Kinase Nucleotide-binding Reference proteome Transferase MTVLKMTDLD MTVLKMTDLDLQGKRVLIREDLNVPVKDGVVASDARILAALPTIKLALEKGAAVMVCSHLGRPTEGEFSAENSLKPVADYLSKALGRDVPLVADYLDGVAVQAGELVLFE... |
DNA metabolic process | cytoplasm | 3'-5'-RNA exonuclease activity nucleic acid binding | Pseudomonas putida | Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome | MQNPQNLIWI | MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEWNTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMRNLENYFHYRNLDVSTLKELAARWAPDVRDSFKKGNTHLALDDIRESIAELRHYREHFIKL | DNA metabolic process cytoplasm 3'-5'-RNA exonuclease activity nucleic acid binding Pseudomonas putida Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome MQNPQNLIWI MQNPQNLIWIDLEMTGLDPDSDVIIEMATIVTDSELNTLAEGPVIAIHHSDEVLARMDEWNTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMRNLENYFHYRNLDVSTLKELAARWAPD... |
mismatch repair | mismatch repair complex | ATP binding ATP hydrolysis activity ATP-dependent DNA damage sensor activity mismatched DNA binding | Pseudomonas putida | DNA damage DNA repair Reference proteome | MSGGSRIQLL | MSGGSRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGSGISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSVARLTLTSRTASASEAWQVETEGRDMTPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIRRLALARFDVGFHLRHNGKSILSLHEAHDEIARARRVGAICGPGFMEQALPIDVERNGLRLWGWVGLPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFLELEPNGVDVNVHPTKHEVRFREGRS... | mismatch repair mismatch repair complex ATP binding ATP hydrolysis activity ATP-dependent DNA damage sensor activity mismatched DNA binding Pseudomonas putida DNA damage DNA repair Reference proteome MSGGSRIQLL MSGGSRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDSGARRIDIEVEQGGVKLLKVRDDGSGISADDLPLALARHATSKIRELEDLEGVLSLGFRGEALASISSV... |
translation | cytoplasm; ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MRHYEIIFLV | MRHYEIIFLVHPDQSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVMLNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVTGQSEMLKAEENRSERRERRERPEHADSAEGDDSNDSDSSDNADE | translation cytoplasm; ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MRHYEIIFLV MRHYEIIFLVHPDQSEQVGGMVERYTKLIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYVMLNVECTGKALAELEDNFRYNDAVIRNLVIRRDEAVTGQSEML... |
translation | ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MARFFRRRKF | MARFFRRRKFCRFTAEDVKEIDFKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLPYTDSHGR | translation ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MARFFRRRKF MARFFRRRKFCRFTAEDVKEIDFKDLNTLKAYVSETGKIVPSRITGTKARYQRQLATAIKRARFLALLPYTDSHGR |
translation | ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MELILLEKVA | MELILLEKVANLGNLGDKVKVKAGYGRNFLLPFGKATVANAANLAAFEERRAELEKAAADKKASAESRAAQLAELEVTITATAGDEGKLFGSIGTHDIADALTASGVEVAKAEVRLPNGTIRQVGEYDVAVHLHSDVEATVRVVVVAA | translation ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MELILLEKVA MELILLEKVANLGNLGDKVKVKAGYGRNFLLPFGKATVANAANLAAFEERRAELEKAAADKKASAESRAAQLAELEVTITATAGDEGKLFGSIGTHDIADALTASGVEVAKAEV... |
protein folding | cytoplasm; nucleoid | bent DNA binding unfolded protein binding | Pseudomonas putida | Chaperone Cytoplasm DNA-binding Reference proteome | MDFKDYYKIL | MDFKDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSKERDAEEKFKEANEAYEVLGDAQKRAEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGARQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVPQTNAMGQRTGFTTKTLNVRIPAGVTDGERIRLKGQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAKVAVPTLDGKINLTIRPDSQSGQRLRVPGKGLANKQGERGNLYAQLKVVMPPASDESARELWTKLSEKAAFNPRTQWSK | protein folding cytoplasm; nucleoid bent DNA binding unfolded protein binding Pseudomonas putida Chaperone Cytoplasm DNA-binding Reference proteome MDFKDYYKIL MDFKDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSKERDAEEKFKEANEAYEVLGDAQKRAEFDEIRKYGGQHGRPFQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAGGNPFGGARQQQRSAGRRGQDVELELAVFLEETLSKESKQISFQVPQTN... |
methylation | cytoplasm | histone methyltransferase activity | Pseudomonas putida | Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase | MPWLQVRLAI | MPWLQVRLAISPEQAETYEDALLEVGAVSVTFMDAEDQPIFEPDLNTTPLWSHTHLLALFEANADPEQVFAHLRLLTGAELPEHQAEVIEDQDWERSWMDNFQPMRFGRRLWIVPSWHDAPEKDAVNLLLDPGLAFGTGTHPTTALCLEWLDGQQLEGTQVLDFGCGSGILAIAALLLGAREAVGTDIDVQAIEASRDNAQRNGIADEKLALYLPEHMPAMQADVLVANILAGPLVSLAPQLSGLVRPGGLLALSGILAEQGEDVAAAYAADFELDPIVVRDGWVRISGRRR | methylation cytoplasm histone methyltransferase activity Pseudomonas putida Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase MPWLQVRLAI MPWLQVRLAISPEQAETYEDALLEVGAVSVTFMDAEDQPIFEPDLNTTPLWSHTHLLALFEANADPEQVFAHLRLLTGAELPEHQAEVIEDQDWERSWMDNFQPMRFGRRLWIVPSWHDAPEKDAVNLLLDPGLAFGTGTHPTTALCLEW... |
L-proline biosynthetic process | cytoplasm | glutamate-5-semialdehyde dehydrogenase activity NADP binding | Pseudomonas putida | Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline biosynthesis Reference proteome | MTESVLDYMT | MTESVLDYMTRLGRAAREASRVIGRASTAQKNRALQAAADALDAARAELTAANELDLAAGRASGLEPALLDRLALTPARIDGMITGLRQVASLPDPVGAIRDMSYRPSGIQVGKMRTPLGVIGIIYESRPNVTIDAASLCLKSGNATILRGGSEAIHSNRAIATCIQRGLAEAGLPAAVVQVVETTDREAVGALISMPEFVDVIVPRGGRGLIERISRDARVPVIKHLDGICHIYVSQHADLDKAWNVAFNAKTYRYGICGAMETLLVDQQVAERFLPEMARRFVEKGVELRGCERTQAIISAKPATEADWHTEYLDAIL... | L-proline biosynthetic process cytoplasm glutamate-5-semialdehyde dehydrogenase activity NADP binding Pseudomonas putida Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline biosynthesis Reference proteome MTESVLDYMT MTESVLDYMTRLGRAAREASRVIGRASTAQKNRALQAAADALDAARAELTAANELDLAAGRASGLEPALLDRLALTPARIDGMITGLRQVASLP... |
leucyl-tRNA aminoacylation | cytoplasm | aminoacyl-tRNA editing activity ATP binding leucine-tRNA ligase activity | Pseudomonas putida | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MHEQYTPRDI | MHEQYTPRDIEAAAQKFWDEQQSFAVTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLGKNVLQPMGWDAFGMPAENAAMKNNVAPAKWTYENIDYMKTQLKSLGLAIDWAREVTTCKPDYYRWEQWLFTRLFEKGIIYRKNGTVNWDPADQTVLANEQVIDGRGWRSGALIEKREIPMYYFRITDYADELLESLDELPGWPEQVKTMQRNWIGKSRGMEVQFPYDKASIGHEGTLKVFTTRPDTLMGATYVAVAAEHPLATQAAQGNPALQAFIDECKSGSVAEADMATQEKKGMATSLLVEHPLTGE... | leucyl-tRNA aminoacylation cytoplasm aminoacyl-tRNA editing activity ATP binding leucine-tRNA ligase activity Pseudomonas putida Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MHEQYTPRDI MHEQYTPRDIEAAAQKFWDEQQSFAVTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQ... |
rRNA processing | cytoplasm | metalloendopeptidase activity RNA endonuclease activity zinc ion binding | Pseudomonas putida | Cytoplasm Endonuclease Hydrolase Metal-binding Nuclease Reference proteome Ribosome biogenesis rRNA processing Zinc | MLELDIQRAT | MLELDIQRATDAATPEDAALRRWCELALRQRSADSEMTIRLVDEAEGRELNHTYRHKDYATNVLSFPADVPDDLLDIPLLGDLVICVAVVEREAAEQGKSLEAHWAHLVIHGCLHLLGYDHIEDEEAEEMESLERELLAELGHPDPYADDETDTITH | rRNA processing cytoplasm metalloendopeptidase activity RNA endonuclease activity zinc ion binding Pseudomonas putida Cytoplasm Endonuclease Hydrolase Metal-binding Nuclease Reference proteome Ribosome biogenesis rRNA processing Zinc MLELDIQRAT MLELDIQRATDAATPEDAALRRWCELALRQRSADSEMTIRLVDEAEGRELNHTYRHKDYATNVLSFPADVPDDLL... |
trans-translation | cytoplasm | RNA binding | Pseudomonas putida | Cytoplasm Reference proteome RNA-binding | MAKQKKHPTG | MAKQKKHPTGTIAQNKKARHDYFIEHKFEAGLVLSGWEVKSLRAGKAHLTDSYVLLKDGEAWLFGSHITPLTTASTHVIADPTRTRKLLLNKRELERVEAAVAQKGYTCVALALYWSKHLIKCEIALGKGKKEFDKRDTMRERDSNRELQRAVRNKGKEE | trans-translation cytoplasm RNA binding Pseudomonas putida Cytoplasm Reference proteome RNA-binding MAKQKKHPTG MAKQKKHPTGTIAQNKKARHDYFIEHKFEAGLVLSGWEVKSLRAGKAHLTDSYVLLKDGEAWLFGSHITPLTTASTHVIADPTRTRKLLLNKRELERVEAAVAQKGYTCVALALYWSKHLIKCEIALGKGKKEFDKRDTMRERDSNRELQRAVRNKGKEE |
protein folding | cytoplasm | adenyl-nucleotide exchange factor activity protein homodimerization activity protein-folding chaperone binding | Pseudomonas putida | Chaperone Cytoplasm Reference proteome Stress response | MADEQLNEKD | MADEQLNEKDLNVEETGAGNAADTRVLELEEQLAAAKDQALRAVADLQNVRRRAEQDVEKAHKFALEKFSSDLLPVIDSLELALAHSSADDEHVKQIREGVELTLKMFQDTLKRYNLEAVDPHGQPFNPEHHQAMAMQENAEVEPNSVLNVFQKGYLLNGRLLRPAMVVVSKAPSAAQPSINEKA | protein folding cytoplasm adenyl-nucleotide exchange factor activity protein homodimerization activity protein-folding chaperone binding Pseudomonas putida Chaperone Cytoplasm Reference proteome Stress response MADEQLNEKD MADEQLNEKDLNVEETGAGNAADTRVLELEEQLAAAKDQALRAVADLQNVRRRAEQDVEKAHKFALEKFSSDLLPVIDSLELALAHSSADDEHVKQIR... |
translation | cytoplasm; ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MALSVEEKAQ | MALSVEEKAQIVAEYQQAAGDTGSPEVQVALLTANINKLQGHFKANDKDHHSRRGLIRMVNQRRKLLDYLKGKDTTRYSALIGRLGLRR | translation cytoplasm; ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MALSVEEKAQ MALSVEEKAQIVAEYQQAAGDTGSPEVQVALLTANINKLQGHFKANDKDHHSRRGLIRMVNQRRKLLDYLKGKDTTRYSALIGRLGLRR |
protein repair | plasma membrane | electron transfer activity FMN binding heme binding metal ion binding | Pseudomonas putida | Cell inner membrane Cell membrane Electron transport Flavoprotein FMN Heme Iron Membrane Metal-binding Reference proteome Transmembrane Transmembrane helix Transport | MRYPWFRLAI | MRYPWFRLAIFIVGCLFPVWWLYEAAMNLLGPDPGKIMMDRLGLGALTFLLVTLSMTPLQKLTGWSGWIVVRRQLGLWVFAYIVLHILCYLFFILGLDWGQLAVELRKRPYIIVGALGFLGLLVLAVTSNRYSQRRLGARWKKLHRLVYAVLGLGLLHFLWIVRSDLREWAIYAFIGAVLMVLRIPAVARALPKVAR | protein repair plasma membrane electron transfer activity FMN binding heme binding metal ion binding Pseudomonas putida Cell inner membrane Cell membrane Electron transport Flavoprotein FMN Heme Iron Membrane Metal-binding Reference proteome Transmembrane Transmembrane helix Transport MRYPWFRLAI MRYPWFRLAIFIVGCLFPVWWLY... |
bacterial-type flagellum-dependent cell motility | bacterial-type flagellum basal body, distal rod, L ring; cell outer membrane | cytoskeletal motor activity | Pseudomonas putida | Bacterial flagellum Cell outer membrane Lipoprotein Membrane Palmitate Reference proteome Signal | MNRLLSVFAL | MNRLLSVFALGGAVLLAGCVAPTPKPNDPYYAPVLPRTPLPAAANNGSIYQAGFEQNLYSDRKAFRVGDIITITLNERTSASKNAGSQIAKTSKTDIGLTSLFGSTPNTNNPFGGGDLSLEAGYSGDRATKGDSKATQGNTLTGSITVTVAEVLPNGIIAVRGEKWLTLNTGEELVRIAGMVRADDIATDNTVPSTRVADARITYSGTGSFADASQPGWLDRFFISPLWPF | bacterial-type flagellum-dependent cell motility bacterial-type flagellum basal body, distal rod, L ring; cell outer membrane cytoskeletal motor activity Pseudomonas putida Bacterial flagellum Cell outer membrane Lipoprotein Membrane Palmitate Reference proteome Signal MNRLLSVFAL MNRLLSVFALGGAVLLAGCVAPTPKPNDPYYAPVLPRTP... |
bacterial-type flagellum-dependent cell motility | bacterial-type flagellum basal body, distal rod, P ring; outer membrane-bounded periplasmic space | structural molecule activity | Pseudomonas putida | Bacterial flagellum Periplasm Reference proteome Signal | MFNVRQLIAT | MFNVRQLIATTLLLSCAFAAQAERLKDIASISGVRSNQLIGYGLVVGLNGTGDQTTQTPFTLQTFNNMLSQFGIKVPAGSGNVQLKNVAAVSVHADLPPFAKPGQVVDITVSSIGNSKSLRGGSLLMTPLKGIDGNVYAIAQGNLVVGGFDAEGRDGSKITVNVPSAGRIPGGASVERAVPSGFNQGNTLTLNLNRPDFTTAKRIVDKVNDLLGPGVAQAVDGGSVRVSAPMDPSQRVDYLSILENLEIDPGQAVAKVIINSRTGTIVIGQNVKVSPAAVTHGSLTVTITEDPIVSQPGAFSNGQTAVVPRSRVNAEQEA... | bacterial-type flagellum-dependent cell motility bacterial-type flagellum basal body, distal rod, P ring; outer membrane-bounded periplasmic space structural molecule activity Pseudomonas putida Bacterial flagellum Periplasm Reference proteome Signal MFNVRQLIAT MFNVRQLIATTLLLSCAFAAQAERLKDIASISGVRSNQLIGYGLVVGLNGTGDQTTQT... |
bacterial-type flagellum-dependent cell motility | bacterial-type flagellum basal body | cytoskeletal motor activity structural molecule activity | Pseudomonas putida | Bacterial flagellum Reference proteome | MSQGVEFNRL | MSQGVEFNRLMLDMRAMQADAMSLPKVTAAPELAPGQSTFADMLGQAIGKVHETQQASTQLANAFEIGKSGVDLTDVMIASQKASVSMQAMTQVRNKLVQAYQDIMQMPV | bacterial-type flagellum-dependent cell motility bacterial-type flagellum basal body cytoskeletal motor activity structural molecule activity Pseudomonas putida Bacterial flagellum Reference proteome MSQGVEFNRL MSQGVEFNRLMLDMRAMQADAMSLPKVTAAPELAPGQSTFADMLGQAIGKVHETQQASTQLANAFEIGKSGVDLTDVMIASQKASVSMQAMTQVRNKLVQAYQDIMQMP... |
adenine salvage AMP salvage purine ribonucleoside salvage | cytoplasm | adenine phosphoribosyltransferase activity | Pseudomonas putida | Cytoplasm Glycosyltransferase Purine salvage Reference proteome Transferase | MHSDAFDLKA | MHSDAFDLKALIRPVVDFPKPGVIFRDITPLFQSPRGLRYVADQFIERYVEAEFSHIGAMDARGFLIGSIIAHQLNKPLILFRKQGKLPADVLSEGYQTEYGEAFLEVHADSLCEGDSVLIFDDLIATGGTLLAAANLVRRTGAQVFEAAAIIDLPELDGSRRLQAAGVPTFCLTEFSLSEY | adenine salvage AMP salvage purine ribonucleoside salvage cytoplasm adenine phosphoribosyltransferase activity Pseudomonas putida Cytoplasm Glycosyltransferase Purine salvage Reference proteome Transferase MHSDAFDLKA MHSDAFDLKALIRPVVDFPKPGVIFRDITPLFQSPRGLRYVADQFIERYVEAEFSHIGAMDARGFLIGSIIAHQLNKPLILFRKQGKLPADVLSEGYQTEYGE... |
nucleotide-excision repair SOS response | cytoplasm; excinuclease repair complex | DNA binding excinuclease ABC activity | Pseudomonas putida | Cytoplasm DNA damage DNA excision DNA repair Excision nuclease Reference proteome SOS response | MSQVFDASAF | MSQVFDASAFLATCSGRPGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALVARIAQVETTITANETEALLLEQNLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRLGIHRGAKKAKGRYFGPYPSAGAIRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCTDLVTAEEYAEDVRHSVMFLEGRSQQLGNELNAEMEKAAMALDFEKAAELRDQIALLRRVQDQQYIEGGSGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMAAFLSQYYLGNAERELPGELIVNVV... | nucleotide-excision repair SOS response cytoplasm; excinuclease repair complex DNA binding excinuclease ABC activity Pseudomonas putida Cytoplasm DNA damage DNA excision DNA repair Excision nuclease Reference proteome SOS response MSQVFDASAF MSQVFDASAFLATCSGRPGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALVARIAQVETTITANETEAL... |
ubiquitin-dependent protein catabolic process via the N-end rule pathway | cytoplasm | arginyl-tRNA--protein transferase activity leucyl-tRNA--protein transferase activity | Pseudomonas putida | Acyltransferase Cytoplasm Reference proteome Transferase | MTELARLKFY | MTELARLKFYATQPHSCSYLPEEQATTLFLDPSQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCNACVPARIPAARFIPNRQQRRILKRNADLTVTAARPAFKEEYFELYRRYIETRHADGDMYPPSRDQFSTFLVRDLPFCWFYEFRLEGRLMAVAVCDLLPNGLSAVYTFYEPDEERRSLGRFAILWQITEALRQNLEAVYLGYWIKNCKKMNYKTQYRPIELLINQRWVTLN | ubiquitin-dependent protein catabolic process via the N-end rule pathway cytoplasm arginyl-tRNA--protein transferase activity leucyl-tRNA--protein transferase activity Pseudomonas putida Acyltransferase Cytoplasm Reference proteome Transferase MTELARLKFY MTELARLKFYATQPHSCSYLPEEQATTLFLDPSQPMDVHVYADLSEMGFRRSGDHLYRPHCQNCN... |
cellular detoxification of fluoride | plasma membrane | fluoride channel activity metal ion binding | Pseudomonas putida | Cell inner membrane Cell membrane Ion channel Ion transport Membrane Metal-binding Reference proteome Sodium Transmembrane Transmembrane helix Transport | MIALIAAVSA | MIALIAAVSAGGIAGTLLRFATTNWVAAHWPRHFYAGTLAVNLVGCLLIGLLYGLFLHKPLAPVELRAGLIVGFLGGLTTFSSFSLDTVRLMESGQVPLALGYTSISVVGGLLATWAGLSLTRF | cellular detoxification of fluoride plasma membrane fluoride channel activity metal ion binding Pseudomonas putida Cell inner membrane Cell membrane Ion channel Ion transport Membrane Metal-binding Reference proteome Sodium Transmembrane Transmembrane helix Transport MIALIAAVSA MIALIAAVSAGGIAGTLLRFATTNWVAAHWPRHFYAGTLAV... |
regulation of pH | plasma membrane | antiporter activity sodium ion transmembrane transporter activity | Pseudomonas putida | Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Transmembrane Transmembrane helix Transport | MHKQELPRAQ | MHKQELPRAQKLAERAFANLERFLHIEAVSGIVLLIAAVAALIWANSPAADSYEALWHTPLTFGVGSHVYSQSLHFWINDGLMTIFFLVVGMEIRREIHEGALSSLRQATLPMAAAVGGVAVPALLYLSFGHAPADQQGWAVPTATDIAFAVGVLALLGKSIPSNVRVFLLALAIIDDIIAVLIIAFFYSGGLDYTGFGVAVIGLLMVIGLQKIGVGSAYAYVIPGAIVWLGILLTGAHPTLAGVVLGLMTPVTAMPMRERPLDAITRFTGELLGRAKAPEQDASDLMDPLKRLRLAQRELLPPVVRMQGTLHPWVAFGI... | regulation of pH plasma membrane antiporter activity sodium ion transmembrane transporter activity Pseudomonas putida Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Transmembrane Transmembrane helix Transport MHKQELPRAQ MHKQELPRAQKLAERAFANLERFLHIEAVSGIVLLIAA... |
aromatic compound catabolic process | membrane | transmembrane transporter activity | Pseudomonas putida | Aromatic hydrocarbons catabolism Membrane Reference proteome Transmembrane Transmembrane helix Transport | MPIANATTVH | MPIANATTVHSDIDHGTKALYSKITWRLIPFLCFCYLAAYLDRINVGFAKLQMLEDLQFSTAAYGLGAGLFFVGYIIFEVPSNLILQRVGAKLWIARIMITWGLLSACTMFVTSTTQFYILRFLLGAAEAGFLPGVLYYLTMWYPTYRRGRIIALFMIGLPLSSVIGGPISGWIMGHFDQVQGLHGWQWLFLLEAIPSVLLGILTFWALPNHFQQAKWLSADDKAQLAADLAADDAEGKDSKHSFRDGFFNLKVWMLGGIDFSILLSAYAMGFWMPTFIRDAGVSDTFHIGLLTAIPSLAALAGMLMIGASSDRHRERRW... | aromatic compound catabolic process membrane transmembrane transporter activity Pseudomonas putida Aromatic hydrocarbons catabolism Membrane Reference proteome Transmembrane Transmembrane helix Transport MPIANATTVH MPIANATTVHSDIDHGTKALYSKITWRLIPFLCFCYLAAYLDRINVGFAKLQMLEDLQFSTAAYGLGAGLFFVGYIIFEVPSNLILQRVGAKLWIARIMITWGLL... |
mRNA catabolic process negative regulation of translational initiation positive regulation of translational initiation regulation of carbohydrate metabolic process | cytoplasm | mRNA 5'-UTR binding | Pseudomonas putida | Activator Cytoplasm Reference proteome Repressor RNA-binding Translation regulation | MLILTRKVGE | MLILTRKVGESIVINDDIKVTILGVKGMQVRIGIDAPKDVQVHREEIFKRIQAGSPAPEKHEDTH | mRNA catabolic process negative regulation of translational initiation positive regulation of translational initiation regulation of carbohydrate metabolic process cytoplasm mRNA 5'-UTR binding Pseudomonas putida Activator Cytoplasm Reference proteome Repressor RNA-binding Translation regulation MLILTRKVGE MLILTRKVGESI... |
glutaminyl-tRNA aminoacylation glutamyl-tRNA aminoacylation | cytoplasm | ATP binding glutamine-tRNA ligase activity | Pseudomonas putida | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MSKPTADNAP | MSKPTADNAPNAAAKGAPAVPANFLRPIIQADLDSGKHSSIVTRFPPEPNGYLHIGHAKSICVNFGLAKEFGGVCHLRFDDTNPAKEDQEYIDAIQSDVKWLGFEWGGDVRYASDYFDQLHDWAVELIKRGKAYVCDLTPEQAKEYRGNLKEPGKNSPFRERSVEENLDLFARMKAGEFKDGERVLRAKIDMASPNMNLRDPILYRIRHAHHHQTGDKWCIYPNYDFTHGQSDAIEGITHSICTLEFEGHRPLYDWFLDNLPVPAHPRQYEFSRLNLNYTITSKRKLKQLVDEKHVDAWDDPRMSTLSGFRRRGYTPASI... | glutaminyl-tRNA aminoacylation glutamyl-tRNA aminoacylation cytoplasm ATP binding glutamine-tRNA ligase activity Pseudomonas putida Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MSKPTADNAP MSKPTADNAPNAAAKGAPAVPANFLRPIIQADLDSGKHSSIVTRFPPEPNGYLHIGHAKSICV... |
nitrogen compound metabolic process | cytoplasm | GTP binding GTPase activity nickel cation binding | Pseudomonas putida | Chaperone Cytoplasm GTP-binding Nickel insertion Nucleotide-binding Reference proteome | MQSYQQPLRV | MQSYQQPLRVGVGGPVGSGKTALLEALCKAMRDHYQIAVVTNDIYTKEDQRILTEAGALEPERIVGVETGGCPHTAIREDASMNLAAVEALARKFGNLEVIFVESGGDNLSATFSPELADLTIYVIDVAEGEKIPRKGGPGITKSDFLVINKTDLAPYVGASLEVMERDTQRMRPQRPWTFSNLKKGEGLQAVIDFIVERGMLGVRG | nitrogen compound metabolic process cytoplasm GTP binding GTPase activity nickel cation binding Pseudomonas putida Chaperone Cytoplasm GTP-binding Nickel insertion Nucleotide-binding Reference proteome MQSYQQPLRV MQSYQQPLRVGVGGPVGSGKTALLEALCKAMRDHYQIAVVTNDIYTKEDQRILTEAGALEPERIVGVETGGCPHTAIREDASMNLAAVEALARKFGNLEVIFVESGG... |
nitrogen compound metabolic process | cytoplasm | nickel cation binding | Pseudomonas putida | Chaperone Cytoplasm Nickel insertion Reference proteome | MNSDLALLRL | MNSDLALLRLLQLASPGLPVGGFTYSQGLEWAVEAGWVRGVDSFAGWQREQVHDTLACLDWPVLARLYHACQAKDAEAFGHWSRFLLANRETAELRLEEQQRGAALARLLDGWQLGQAPAWRASLELTQLGGMAWLAAHWAIPLRQLALGHGFAWLEGAVMAGVKLVPFGQQAAQTLLRDLGADLPAALDQALALGDDQLGGGLPLLAIASSRHETQYTRLFRS | nitrogen compound metabolic process cytoplasm nickel cation binding Pseudomonas putida Chaperone Cytoplasm Nickel insertion Reference proteome MNSDLALLRL MNSDLALLRLLQLASPGLPVGGFTYSQGLEWAVEAGWVRGVDSFAGWQREQVHDTLACLDWPVLARLYHACQAKDAEAFGHWSRFLLANRETAELRLEEQQRGAALARLLDGWQLGQAPAWRASLELTQLGGMAWLAAHWAIPLRQLALGHGFAWLEGAVMAGVKL... |
protein folding protein-containing complex assembly urea metabolic process | cytoplasm | nickel cation binding unfolded protein binding | Pseudomonas putida | Chaperone Cytoplasm Nickel Nickel insertion Reference proteome | MIVLSRRISE | MIVLSRRISEPGTRVVSGTVTLDVDSRIKSRLRVTLDDGREAGLMLERGHLLRGGELLADAEGTQLIRVLAAPEAVSTVRCADPHLLARAAYHLGNRHVPLQIEPGLLRFQHDHVLDDMLRGLGLTVEAEQAPFEPEAGAYQSAPHGHSHSHAHGHDHPFVRLPAHS | protein folding protein-containing complex assembly urea metabolic process cytoplasm nickel cation binding unfolded protein binding Pseudomonas putida Chaperone Cytoplasm Nickel Nickel insertion Reference proteome MIVLSRRISE MIVLSRRISEPGTRVVSGTVTLDVDSRIKSRLRVTLDDGREAGLMLERGHLLRGGELLADAEGTQLIRVLAAPEAVSTVRCADPHLLARAAYHLG... |
urea catabolic process | urease complex | urease activity | Pseudomonas putida | Cytoplasm Hydrolase Reference proteome | MIPGEIQVAA | MIPGEIQVAAGDIELNSGRETVSVSVANHGDRPVQVGSHYHFYEVNDALVFDRAPTLGFRLDIPAGTAVRFEPGQARTVQLVAYAGKREVYGFQGKVMGALEGRA | urea catabolic process urease complex urease activity Pseudomonas putida Cytoplasm Hydrolase Reference proteome MIPGEIQVAA MIPGEIQVAAGDIELNSGRETVSVSVANHGDRPVQVGSHYHFYEVNDALVFDRAPTLGFRLDIPAGTAVRFEPGQARTVQLVAYAGKREVYGFQGKVMGALEGRA |
urea catabolic process | cytoplasm | nickel cation binding urease activity | Pseudomonas putida | Cytoplasm Hydrolase Reference proteome | MELTPREKDK | MELTPREKDKLLLFTAALLAERRLARGLKLNYPEAVALISAAVLEGARDGRTVAELMSLGREVLTREQVMPGIAEMLHDVQVEATFPDGTKLVTVHDPIV | urea catabolic process cytoplasm nickel cation binding urease activity Pseudomonas putida Cytoplasm Hydrolase Reference proteome MELTPREKDK MELTPREKDKLLLFTAALLAERRLARGLKLNYPEAVALISAAVLEGARDGRTVAELMSLGREVLTREQVMPGIAEMLHDVQVEATFPDGTKLVTVHDPIV |
nitrogen compound metabolic process | cytoplasm | nickel cation binding | Pseudomonas putida | Chaperone Cytoplasm Nickel insertion Reference proteome | MSLAEQIEQQ | MSLAEQIEQQQDDAGWSAHLQLRFVQRDGVTRLGAWKHFGPLLVQRPFYPEGAPCHVYVLHPPGGIVAGDRLELDIHLEPGSHALLTMPGASKFYRSIGPTARLAQRFHLAAGSTLEWLPQDSIFFSGARASLASRFTLEPGARLLAWETLCLGRPVMHERFDHGALDSLLHIELPDEVGLHERLRLEGGHLGKLGGHPLLATFCAAPANQAVLEQVRPLLDELGNPAGATLLGSLLVIRVLDHDNQHLQRTLQRLWHVLRPAILGLPACPPRIWAT | nitrogen compound metabolic process cytoplasm nickel cation binding Pseudomonas putida Chaperone Cytoplasm Nickel insertion Reference proteome MSLAEQIEQQ MSLAEQIEQQQDDAGWSAHLQLRFVQRDGVTRLGAWKHFGPLLVQRPFYPEGAPCHVYVLHPPGGIVAGDRLELDIHLEPGSHALLTMPGASKFYRSIGPTARLAQRFHLAAGSTLEWLPQDSIFFSGARASLASRFTLEPGARLLAWETLCLGRPVMHERFDHGA... |
translation | ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MARVKRGVIA | MARVKRGVIARKRHKKILKLAKGYYGARSRVFRVAKQAVIKAGQYAYRDRRQKKRQFRALWIARINAGARTNGLSYSRLIAGLKKASIEIDRKVLADLAVNEKAAFAAIVEKAKAVLA | translation ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MARVKRGVIA MARVKRGVIARKRHKKILKLAKGYYGARSRVFRVAKQAVIKAGQYAYRDRRQKKRQFRALWIARINAGARTNGLSYSRLIAGLKKASIEIDRKVLADLAVNEKAAFAAIVEKAK... |
translation | ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MPKMKTKSGA | MPKMKTKSGAAKRFLKTASGFKHKHAFKSHILTKMSTKRKRQLRGASLLHPSDVAKVERMLRVR | translation ribonucleoprotein complex; ribosome structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MPKMKTKSGA MPKMKTKSGAAKRFLKTASGFKHKHAFKSHILTKMSTKRKRQLRGASLLHPSDVAKVERMLRVR |
serine transport threonine transport | plasma membrane | amino acid transmembrane transporter activity symporter activity | Pseudomonas putida | Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Symport Transmembrane Transmembrane helix Transport | MTPFLRILNR | MTPFLRILNRTSLVTQIVIGLLAGIALALLAPAIARDLAFLGKVFVSALKAVAPVLVFILVMASVANHRHGQETHIRPILWLYLLGTFAAAVVAVFASMLFPSHLALSTSEATLSAPGGIAEVLQNLLLNAVDNPVNALLNANFIGVLTWAIGLGVALRHAGETTRTVVEDLSNGVTLIVRVVIRFAPLGIFGLVSSTLAQSGLDALLGYLHLLAVLIGCMLFVALVMNPLIVFWKIRRNPYPLTLLCLRESGITAFFTRSSAANIPVNLALSERLGLHEDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGIQVDLP... | serine transport threonine transport plasma membrane amino acid transmembrane transporter activity symporter activity Pseudomonas putida Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Symport Transmembrane Transmembrane helix Transport MTPFLRILNR MTPFLRILNRTSLVTQIVIGLLAGIALALLAPAIARD... |
proteolysis | cytoplasm | ATP-dependent peptidase activity serine-type endopeptidase activity | Pseudomonas putida | Cytoplasm Hydrolase Protease Reference proteome Serine protease | MSRNSYIQQS | MSRNSYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAEYGLIDSVYDKRQLAS | proteolysis cytoplasm ATP-dependent peptidase activity serine-type endopeptidase activity Pseudomonas putida Cytoplasm Hydrolase Protease Reference proteome Serine protease MSRNSYIQQS MSRNSYIQQSSDIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRV... |
tRNA wobble position uridine thiolation | cytoplasm | sulfur carrier activity | Pseudomonas putida | Cytoplasm Reference proteome | MTDFTPDAIL | MTDFTPDAILDATGLNCPEPVMMLHQHVRNLAAGGLLKVIATDPSTRRDIPKFCNFLGHELLQQQEDAGTFLYWIRKKAD | tRNA wobble position uridine thiolation cytoplasm sulfur carrier activity Pseudomonas putida Cytoplasm Reference proteome MTDFTPDAIL MTDFTPDAILDATGLNCPEPVMMLHQHVRNLAAGGLLKVIATDPSTRRDIPKFCNFLGHELLQQQEDAGTFLYWIRKKAD |
leucine biosynthetic process | 3-isopropylmalate dehydratase complex | 3-isopropylmalate dehydratase activity | Pseudomonas putida | Amino-acid biosynthesis Branched-chain amino acid biosynthesis Leucine biosynthesis Lyase Reference proteome | MKAFTQHTGI | MKAFTQHTGIVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDVGQPYQDNSKRPLNEEFVLNHARYQGASVLLARENFGCGSSREHAPWALDEYGFRSIIAPSFADIFFNNSFKNGLLPIILSDEEVDELFKQVEANPGYQLTIDLQAQAVTRPDGKVLHFEIDAFRKHCLLNGLDDIGLTLQDSDAIKAFEAKHRASQPWLFRDA | leucine biosynthetic process 3-isopropylmalate dehydratase complex 3-isopropylmalate dehydratase activity Pseudomonas putida Amino-acid biosynthesis Branched-chain amino acid biosynthesis Leucine biosynthesis Lyase Reference proteome MKAFTQHTGI MKAFTQHTGIVAPLDRANVDTDQIIPKQFLKSIKRTGFGPNLFDEWRYLDVGQPYQDNSKRPLNEEFVLNHARYQ... |
translation | large ribosomal subunit | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MAVQQNKKSR | MAVQQNKKSRSARDMRRSHDALSENALSVEKTTGEVHLRHHVSPEGVYRGRKVVDKGADE | translation large ribosomal subunit structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MAVQQNKKSR MAVQQNKKSRSARDMRRSHDALSENALSVEKTTGEVHLRHHVSPEGVYRGRKVVDKGADE |
nucleotide metabolic process | cytoplasm | nucleoside triphosphate diphosphatase activity | Pseudomonas putida | Cytoplasm Hydrolase Nucleotide metabolism Reference proteome | MLPLLLASSS | MLPLLLASSSAYRRELLARLHLPFTWASPDIDEQRLDGEPPVELVRRLARQKAEALAGSHPRHLIIGSDQVAVLGEQVLGKPHTFERACEQLLECSGQQVSFLTGLALLNSATGQCQVDCVPFTVTLRELSREQVERYVAAEQPLDCAGSFKAEGLGVSLFQSTHGCDATSLIGLPLIRLVDMLTKEGVMVP | nucleotide metabolic process cytoplasm nucleoside triphosphate diphosphatase activity Pseudomonas putida Cytoplasm Hydrolase Nucleotide metabolism Reference proteome MLPLLLASSS MLPLLLASSSAYRRELLARLHLPFTWASPDIDEQRLDGEPPVELVRRLARQKAEALAGSHPRHLIIGSDQVAVLGEQVLGKPHTFERACEQLLECSGQQVSFLTGLALLNSATGQCQVDCVPFTVTLRELSREQVERYVAAEQ... |
CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process lipopolysaccharide biosynthetic process | cytoplasm | 3-deoxy-manno-octulosonate cytidylyltransferase activity | Pseudomonas putida | Cytoplasm Lipopolysaccharide biosynthesis Nucleotidyltransferase Reference proteome Transferase | MSLEFTVVIP | MSLEFTVVIPARLRSTRLPGKPLLLIAGKPMVQHVWEQARKSGASRVVIATDDTSILEACQAFGAEVMMTRADHESGTDRLAEVAAYLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSRAPLPWARDTFAKARDVLPEGVPYRRHIGMYAYRVGFLHDFVSWGPCWLEQAEALEQLRALWHGVRIHIEDAIEAPAVGVDTPEDLERVRRLLEA | CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process lipopolysaccharide biosynthetic process cytoplasm 3-deoxy-manno-octulosonate cytidylyltransferase activity Pseudomonas putida Cytoplasm Lipopolysaccharide biosynthesis Nucleotidyltransferase Reference proteome Transferase MSLEFTVVIP MSLEFTVVIPARLRSTRLPGKPLL... |
proteolysis | plasma membrane | metalloendopeptidase activity zinc ion binding | Pseudomonas putida | Cell inner membrane Cell membrane Hydrolase Membrane Metal-binding Metalloprotease Protease Reference proteome Transmembrane Transmembrane helix Zinc | MMRILLFVAT | MMRILLFVATNLAVVLVASITLSLFGFNGFMAANGVDLNLSSLLVFCAVFGFAGSLVSLFISKWMAKMTTGTQIISQPRTRHEQWLLQTVEELSREAGIKMPEVGIFPAYEANAFATGWNRNDALVAVSQGLLERFSPDEVRAVLAHEIGHVANGDMVTLALVQGVVNTFVMFFARIIGNFVDKVIFKNEEGQGIAYYVATIVAELILGILASMIVMWFSRRREFRADEAGAQLAGTAAMIGALQRLRVEQGLPVHMPDTMKAFGINGGLKHGLAGLLMSHPPLEDRIEALRQRG | proteolysis plasma membrane metalloendopeptidase activity zinc ion binding Pseudomonas putida Cell inner membrane Cell membrane Hydrolase Membrane Metal-binding Metalloprotease Protease Reference proteome Transmembrane Transmembrane helix Zinc MMRILLFVAT MMRILLFVATNLAVVLVASITLSLFGFNGFMAANGVDLNLSSLLVFCAVFGFAGSLVSLFISKWM... |
methylation response to metal ion | cytoplasm | thiopurine S-methyltransferase activity | Pseudomonas putida | Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase | MEPAFWQQRW | MEPAFWQQRWADNQIGFHQAQVNPYLQTYWPQLQLAPGSRVLVPLCGKSLDLAWLAGQGHRVLGVELSRRAVEDFFREHGLEAEVRQQGAFEVWRSGDVQLWCGDFFALRAEDVADCVGLYDRAAVIALPVQMRARYMQLLSGLLPANCRGLVVTLEYDQSLLAGPPFSVRDEELRQGFAGWQVEQLEAVDVIEDSPKFVQAGASSLLERVYQVSR | methylation response to metal ion cytoplasm thiopurine S-methyltransferase activity Pseudomonas putida Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase MEPAFWQQRW MEPAFWQQRWADNQIGFHQAQVNPYLQTYWPQLQLAPGSRVLVPLCGKSLDLAWLAGQGHRVLGVELSRRAVEDFFREHGLEAEVRQQGAFEVWRSGDVQLWCGDFFALRAEDVADCVGLYDR... |
de novo' IMP biosynthetic process | cytoplasm | ATP binding phosphoribosylformylglycinamidine cyclo-ligase activity | Pseudomonas putida | ATP-binding Cytoplasm Ligase Nucleotide-binding Purine biosynthesis Reference proteome | MSKQPSLSYK | MSKQPSLSYKDAGVDIDAGEALVERIKGVAKRTARPEVMGGLGGFGALCEIPAGYKQPVLVSGTDGVGTKLRLALNLNKHDSIGQDLVAMCVNDLVVCGAEPLFFLDYYATGKLNVDVAATVVTGIGAGCELAGCSLVGGETAEMPGMYEGEDYDLAGFCVGVVEKAEIIDGSKVATGDALIALPSSGPHSNGYSLIRKILEVSATDIENTQLDGKPLTDLLMAPTRIYVKPLLQLIKNTGAVKAMAHITGGGLLDNIPRVLPKNAQAVVDVASWQRPAVFDFLQEKGNVDEHEMHRVLNCGVGMVICVAQDQVEAALNE... | de novo' IMP biosynthetic process cytoplasm ATP binding phosphoribosylformylglycinamidine cyclo-ligase activity Pseudomonas putida ATP-binding Cytoplasm Ligase Nucleotide-binding Purine biosynthesis Reference proteome MSKQPSLSYK MSKQPSLSYKDAGVDIDAGEALVERIKGVAKRTARPEVMGGLGGFGALCEIPAGYKQPVLVSGTDGVGTKLRLALNLNKHDSIGQDLVAMC... |
cellular response to stimulus response to stress | cytoplasm | zinc ion binding | Pseudomonas putida | Cytoplasm Metal-binding Reference proteome Zinc | MPEQLKQRVE | MPEQLKQRVETCYQQAEAFFKRRFPRPEVSFKLRGQKAGVAHLHENLLRFNLQLYRENQEDFLRQTVAHEVAHLVAHQLFGDRIQAHGEEWQLIMRGVYELPPNRCHNYDVQRRAVTRYIYRCPCPQSDFPFTAQRHKLVHQGRRYLCKRCREVLVYSGETRVE | cellular response to stimulus response to stress cytoplasm zinc ion binding Pseudomonas putida Cytoplasm Metal-binding Reference proteome Zinc MPEQLKQRVE MPEQLKQRVETCYQQAEAFFKRRFPRPEVSFKLRGQKAGVAHLHENLLRFNLQLYRENQEDFLRQTVAHEVAHLVAHQLFGDRIQAHGEEWQLIMRGVYELPPNRCHNYDVQRRAVTRYIYRCPCPQSDFPFTAQRHKLVHQGRRYLCKRCREVLVYSGETRVE |
tRNA modification | cytoplasm | ATP binding ligase activity, forming carbon-nitrogen bonds | Pseudomonas putida | ATP-binding Cytoplasm Ligase Nucleotide-binding Reference proteome tRNA processing | MINLTPWLNA | MINLTPWLNAPTWYVAFSGGLDSTVLLHLLAEYARNHASPPLRAIHIHHGLQAAADAWPAHCQAICDNFDVELQVIHVQVSPGASLEQAARDARYAAFRQVLGPGDILFTGQHRDDQAETLLFRLLRGAGLRGLAAMPGQRALGQGSLVRPLLACSRQHLQEYAQAQGLTWIEDPSNVDTQFARNYLRGEVMPHLQQRWPQASQNFARAAEHLGEALGLLDELAQEDLALAGKGAPLAWPGLDSLDLAALLALSPARQRNALQYWLSQRTRLPDTRHWAGWADLRDAGADARPVWRLADGRLVRSHGRIWWLSGDWLQQP... | tRNA modification cytoplasm ATP binding ligase activity, forming carbon-nitrogen bonds Pseudomonas putida ATP-binding Cytoplasm Ligase Nucleotide-binding Reference proteome tRNA processing MINLTPWLNA MINLTPWLNAPTWYVAFSGGLDSTVLLHLLAEYARNHASPPLRAIHIHHGLQAAADAWPAHCQAICDNFDVELQVIHVQVSPGASLEQAARDARYAAFRQVLGPGDILFTGQHRDDQAET... |
lipid A biosynthetic process | cytoplasm | acyl--UDP-N-acetylglucosamine O-acyltransferase activity | Pseudomonas putida | Acyltransferase Cytoplasm Lipid A biosynthesis Lipid biosynthesis Lipid metabolism Reference proteome Repeat Transferase | MNSIDPRAII | MNSIDPRAIIDPSAKLADGVEVGPWSIVGPDVEIGEGTVIGPHVVLKGPTRIGKHNRIFQFSSIGEDTPDLKYKGEPTRLVIGDHNVIREGVTIHRGTVQDRAETTVGDHNLIMAYAHIGHDSVIGNHCILVNNTALAGHVHVGDWAILSGYTLVHQYCHIGAHAFSGMGTAIGKDVPAFVTVFGSPAEARSMNFEGMRRRGFSDEVIHVLRRCYKIVYRQGLTVEDALKELAEPATQHPEVELFRQSILSSARGITR | lipid A biosynthetic process cytoplasm acyl--UDP-N-acetylglucosamine O-acyltransferase activity Pseudomonas putida Acyltransferase Cytoplasm Lipid A biosynthesis Lipid biosynthesis Lipid metabolism Reference proteome Repeat Transferase MNSIDPRAII MNSIDPRAIIDPSAKLADGVEVGPWSIVGPDVEIGEGTVIGPHVVLKGPTRIGKHNRIFQFSSIGEDTPDLKY... |
translation | small ribosomal subunit | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MSQVNMRDML | MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIVNLEKTLPMFNDALSFVERLAQGKNKILFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVIDVDHERIAITEANKLGIPVIGVVDTNSSPEGVDYIIPGNDDAIRAIELYMTSMADAVIRGRNNVAGGTEVYAEEAAAPAAE | translation small ribosomal subunit structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MSQVNMRDML MSQVNMRDMLKAGVHFGHQTRYWNPKMGKYIFGARNKIHIVNLEKTLPMFNDALSFVERLAQGKNKILFVGTKRSAGKIVAEQAARCGSPYVDHRWLGGMLTNYKTIRASIKRLRDLETQAEDGTFAKLTKKEALMRSRDLEKLDRSLGGIKDMGGLPDALFVI... |
CDP-diacylglycerol biosynthetic process | plasma membrane | glycerol-3-phosphate O-acyltransferase activity sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity | Pseudomonas putida | Acyltransferase Cell inner membrane Cell membrane Lipid biosynthesis Lipid metabolism Membrane Phospholipid biosynthesis Phospholipid metabolism Reference proteome Transferase | MTRSPLHRLI | MTRSPLHRLIFGGLRRLLYLWVRSETINQSSMTLNLDRSRPVFYALPSPALTDLAVLDHECTKAGLPRPVLPVAVGPLQEPAAFFYLTPDPDWLGRQDKSGAPPTLERLVAAVSQHAEEDAQIIPVSVFWGQTPASESSPWKLLFADSWAVTGRLRRLLTVLILGRKTRVQFSAPIHLRELVQHNKGHERTVRMAQRLMRVHFRNLKTAVIGPDISHRRTLVKGLVHAPQVRQAIADEAQRENLPLAKAEAQALRYGNEIASDYTYTAIRFLEVVLSWFWNKIYDGIKVNHIEQVQGIAPGHEVIYVPCHRSHIDYLLLS... | CDP-diacylglycerol biosynthetic process plasma membrane glycerol-3-phosphate O-acyltransferase activity sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity Pseudomonas putida Acyltransferase Cell inner membrane Cell membrane Lipid biosynthesis Lipid metabolism Membrane Phospholipid biosynthesis Phospholip... |
cell division chromosome segregation DNA transposition | cytoplasm | DNA binding tyrosine-based site-specific recombinase activity | Pseudomonas putida | Cell cycle Cell division Chromosome partition Cytoplasm DNA integration DNA recombination DNA-binding Reference proteome | MPALDHPLID | MPALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQEHSVSLPDAGRDLILDHLAWRLDQGYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVDMPQLGKPLPKSLSEADVEALLQAPDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLVPMGEEAVVWLERYQRDGRAELLNGRPSDVLFPSQRGEQMTRQTFWHRIKHHARVAGIDKPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAKARLQQLHAQHHPRG | cell division chromosome segregation DNA transposition cytoplasm DNA binding tyrosine-based site-specific recombinase activity Pseudomonas putida Cell cycle Cell division Chromosome partition Cytoplasm DNA integration DNA recombination DNA-binding Reference proteome MPALDHPLID MPALDHPLIDQFLDALWLEKGLSDNTRVSYRSDLALFNGWLQ... |
translation | ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MTNKIIQQLE | MTNKIIQQLEAEQMSKEIPTFAPGDTVVVQVKVKEGERSRLQAFEGVVIAKRNRGLNSAFTVRKISSGVGVERTFQTYSPQIDSLAVKRRGDVRKAKLYYLRDLSGKAARIKEKLS | translation ribonucleoprotein complex; ribosome structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MTNKIIQQLE MTNKIIQQLEAEQMSKEIPTFAPGDTVVVQVKVKEGERSRLQAFEGVVIAKRNRGLNSAFTVRKISSGVGVERTFQTYSPQIDSLAVKRRGDVRKAKLYYLRDLSGKAARIKEKLS |
ribosomal small subunit biogenesis rRNA processing | cytoplasm; ribosome | ribosome binding | Pseudomonas putida | Chaperone Cytoplasm Reference proteome Ribosome biogenesis rRNA processing | MNATPEKADD | MNATPEKADDLIVVGKIFSVHGVRGEVKVYSFTDPIENLLDYPRWTLRHEGKVKQVELVSGRGSQKGLVVKLKGLDDRDEARLLSGYEICIPRSLLPNLAADEYYWYQLVGLKVINQDEQLFGKVDHLLETGANDVMVVKPCAGSLDDRERLLPYTEQCVLAIDLEAGVMRVEWDADF | ribosomal small subunit biogenesis rRNA processing cytoplasm; ribosome ribosome binding Pseudomonas putida Chaperone Cytoplasm Reference proteome Ribosome biogenesis rRNA processing MNATPEKADD MNATPEKADDLIVVGKIFSVHGVRGEVKVYSFTDPIENLLDYPRWTLRHEGKVKQVELVSGRGSQKGLVVKLKGLDDRDEARLLSGYEICIPRSLLPNLAADEYYWYQLVGLKVINQDEQLFGKVDH... |
translation | cytoplasm; ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MVTIRLARGG | MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERVGFFNPIAAGAEVKLSVNQERVTYWLSQGAQPSERVAQLLKEAAKAAA | translation cytoplasm; ribonucleoprotein complex; ribosome structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MVTIRLARGG MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERVGFFNPIAAGAEVKLSVNQERVTYWLSQGAQPSERVAQLLKEAAKAAA |
base-excision repair | cytoplasm | uracil DNA N-glycosylase activity | Pseudomonas putida | Cytoplasm DNA damage DNA repair Hydrolase Reference proteome | MTDDDRIKLE | MTDDDRIKLEPSWKAALRGEFDQPYMHQLREFLRGEYAAGKEIYPPGPLIFNALNSTPLDQVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQGVLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNVVFLLWGAHAQSKQKLIDGTKHLVLKSVHPSPLSAYRGFIGCGHFSRANSFLEQRGLGPIDWALPPL | base-excision repair cytoplasm uracil DNA N-glycosylase activity Pseudomonas putida Cytoplasm DNA damage DNA repair Hydrolase Reference proteome MTDDDRIKLE MTDDDRIKLEPSWKAALRGEFDQPYMHQLREFLRGEYAAGKEIYPPGPLIFNALNSTPLDQVKVVILGQDPYHGPGQAHGLCFSVQPGVATPPSLVNIYKELQRDLNIPIPSHGYLQSWAEQGVLLLNTTMTVERANAASHAKKGWELFTDRIIQVVSEQCPNV... |
rRNA base methylation | cytoplasm | rRNA (cytosine-N4-)-methyltransferase activity | Pseudomonas putida | Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase | MTIDSGFNHI | MTIDSGFNHITVLLDEAVEALALRADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQALAAEDGRFVIVQRSFAELGAEVAARGLHGKVSGVLLDLGVSSPQLDDPERGFSFLNDGPLDMRMNPDQGVSAAEFIATAPVEEIARVFKEYGEERFAGRMARAVVERREKQPFTRTADLAEVLKVANPAWEKGKNPATRAFQGLRIHVNNELGDLEAGLEAALDALEVGGRLAVISFHSLEDRIVKLFMRKLVKGEADNLPRNLPVQHKVFEPKIKLIGKAQFASEAELKANPRSRSAVMRVAEKLR | rRNA base methylation cytoplasm rRNA (cytosine-N4-)-methyltransferase activity Pseudomonas putida Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase MTIDSGFNHI MTIDSGFNHITVLLDEAVEALALRADGCYLDGTFGRGGHSRLILSKLGPQGRLLGFDKDPQAIATGQALAAEDGRFVIVQRSFAELGAEVAARGLHGKVSGVLLDLGVSSPQ... |
translation | cytoplasm; ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MSATQNYGTG | MSATQNYGTGRRKTATARVFLRPGTGNISINNRSLDVFFGRETARMVVRQPLELTESVEKFDIYVTVSGGGVSGQAGAIRHGITRALMEYDETLRGALRRAGYVTRDAREVERKKVGLRKARKRPQYSKR | translation cytoplasm; ribonucleoprotein complex; ribosome structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MSATQNYGTG MSATQNYGTGRRKTATARVFLRPGTGNISINNRSLDVFFGRETARMVVRQPLELTESVEKFDIYVTVSGGGVSGQAGAIRHGITRALMEYDETLRGALRRAGYVTRDAREVERKKVGLRKARKRPQYSKR |
translation | ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MKTFTAKPET | MKTFTAKPETVKREWFVVDAAGQTLGRLATEIATRLRGKHKPEYTPHVDTGDYIVVINAEQVRVTGAKSSDKMYYSHSGFPGGIKEINFEKLIAKAPERVIETAVKGMLPKNPLGRDMYRKLKVYAGAAHPHTAQQPQELKI | translation ribonucleoprotein complex; ribosome structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MKTFTAKPET MKTFTAKPETVKREWFVVDAAGQTLGRLATEIATRLRGKHKPEYTPHVDTGDYIVVINAEQVRVTGAKSSDKMYYSHSGFPGGIKEINFEKLIAKAPERVIETAVKGMLPKNPLGRDMYRKLKVYAGAAHPHTAQQPQELKI |
alginic acid biosynthetic process | plasma membrane | glycosyltransferase activity | Pseudomonas putida | Alginate biosynthesis Cell membrane Glycosyltransferase Membrane Reference proteome Transferase Transmembrane Transmembrane helix | MLNMQRLQTV | MLNMQRLQTVLLQCAGWLLYMSLLMLIALALPADIFDSQSKHFIFLVGAVGIWRYSMGATHFIRGMIFLYGVYPYLRRKVQKMGNATDPSHVYLMVTSFRIEALTTAQVYSSVIREAINCGFPTTVVCSLVEMSDELLVKSLWAKYNPPAHVKLDIVRIAGTGKRDGLAYGFRAISRMLPDENAVVAVIDGDTVLADGVVRKTVPWFKLFPNVGGLTTNEFCEVRGGYIMSEWHKLRFAQRHINMCSMALSKRVLTMTGRMSMFRASVVTNPEFIADVESDSLMHWRLGRFKFLTGDDKSSWFSLMRLGYDTFYVPDAAI... | alginic acid biosynthetic process plasma membrane glycosyltransferase activity Pseudomonas putida Alginate biosynthesis Cell membrane Glycosyltransferase Membrane Reference proteome Transferase Transmembrane Transmembrane helix MLNMQRLQTV MLNMQRLQTVLLQCAGWLLYMSLLMLIALALPADIFDSQSKHFIFLVGAVGIWRYSMGATHFIRGMIFLYGVYPYLRRKVQ... |
alginic acid biosynthetic process | periplasmic space | cyclic-di-GMP binding | Pseudomonas putida | Alginate biosynthesis Periplasm Reference proteome | MNTAVNVNVV | MNTAVNVNVVHESEAQRQHARVRIPAKLRFLDAQRQVHEVKVEDLSAGGLSFHTKQPQSVGDVLRGRLQFVVDNLGLSIDIEFQVRSYNPDNGRIGAQFQNLEPRDIATLRHIITSHLSGELISIGDVLSTLQRDNFTKARKQKDGGSGLSAFGRFKAVTVTLGVFVVGVAAFGFVAKSLYGMYFVSHAEAGVVAVPTTNVTMPRDGTVSSLVESGGQIAKGAPLASFTTSMLDMLKGNLEDAQLEPAKIEELFGKQLSGTLTSPCDCVVARQLVDDGQYAAKGQPIFQLIPRTTTPMVEARFSYRQFDEVKPGTRVNFQ... | alginic acid biosynthetic process periplasmic space cyclic-di-GMP binding Pseudomonas putida Alginate biosynthesis Periplasm Reference proteome MNTAVNVNVV MNTAVNVNVVHESEAQRQHARVRIPAKLRFLDAQRQVHEVKVEDLSAGGLSFHTKQPQSVGDVLRGRLQFVVDNLGLSIDIEFQVRSYNPDNGRIGAQFQNLEPRDIATLRHIITSHLSGELISIGDVLSTLQRDNFTKARKQKDGGSGLSAFGRFKAVTVTLGV... |
alginic acid catabolic process | periplasmic space | poly(beta-D-mannuronate) lyase activity | Pseudomonas putida | Lyase Periplasm Reference proteome Signal | MRRPMTLFKR | MRRPMTLFKRISSPALLALALFGGAAHAALVPPQGYYQGIEKLKTGDGNFRCEAAPQPYTGPLQFRSKYEGSDKARATLNAASEKAFRKSTEDITTLEKGVSKMVGQYMRDGRPAQLDCTLTWLGTWARAGALLSTDYNHTGKSMRKWALGSMSGSWLRLKFSNSQPLAAHQAEADLIEKWLTRLAEQTVRDWSDLPLEKINNHSYWAAWSVMATAVATDRRDLFDWAVKEYKVGANQVDDQGFLPNEIKRQQRALAYHNYALPPLAMIASFAQANGVDLRAENNFALQRLGEGVLAGARDPSHFKARAGKKQDMTDLKV... | alginic acid catabolic process periplasmic space poly(beta-D-mannuronate) lyase activity Pseudomonas putida Lyase Periplasm Reference proteome Signal MRRPMTLFKR MRRPMTLFKRISSPALLALALFGGAAHAALVPPQGYYQGIEKLKTGDGNFRCEAAPQPYTGPLQFRSKYEGSDKARATLNAASEKAFRKSTEDITTLEKGVSKMVGQYMRDGRPAQLDCTLTWLGTWARAGALLSTDYNHTGKSMRKWALGSMSGSWLR... |
alginic acid biosynthetic process | plasma membrane | acyltransferase activity | Pseudomonas putida | Acyltransferase Alginate biosynthesis Cell inner membrane Cell membrane Membrane Reference proteome Transferase Transmembrane Transmembrane helix | MVFSSNVFLF | MVFSSNVFLFLFLPIFLGLYYLSGQRYRNLLLLVASYIFYAWWRVDFLALFAGVTLWNYWIGLKVGAAGVRTKPAQRWLLLGVGVDLAILGYFKYANFGVDSLNAIMTSFGLEPFILTHVLLPIGISFYIFESISYIIDVYRGDTPATRNLIDFAAFVAIFPHLIAGPVLRFKDLVDQFNNRTHTLDKFSEGCTRFMQGFIKKVFIADTLAVVADHCFALQNPTTGDAWLGALAYTAQLYFDFSGYSDMAIGLGLMMGFRFMENFKQPYISQSITEFWRRWHISLSTWLRDYLYITLGGNRKGTFNTYRNLFLTMLLGGL... | alginic acid biosynthetic process plasma membrane acyltransferase activity Pseudomonas putida Acyltransferase Alginate biosynthesis Cell inner membrane Cell membrane Membrane Reference proteome Transferase Transmembrane Transmembrane helix MVFSSNVFLF MVFSSNVFLFLFLPIFLGLYYLSGQRYRNLLLLVASYIFYAWWRVDFLALFAGVTLWNYWIGLKVGAAG... |
DNA recombination DNA repair | cytoplasm; Holliday junction helicase complex; Holliday junction resolvase complex | ATP binding four-way junction DNA binding four-way junction helicase activity | Pseudomonas putida | Cytoplasm DNA damage DNA recombination DNA repair DNA-binding Reference proteome | MIGRLRGTLA | MIGRLRGTLAEKQPPHLIIDVNGVGYELEVPMTTLYRLPKVGETVTVHTHLVVREDAHLLYGFAEKRERELFRELIRLNGVGPKLALALMSGLEVDELVRCVQAQDTSALVRVPGVGKKTAERLLVELKDRFKAWETSPAMFTLVSDGPLPVASESSAEADAVSALVSLGYKPQEASKAIAAIKDKAGLSSEELIRRSLKGMISK | DNA recombination DNA repair cytoplasm; Holliday junction helicase complex; Holliday junction resolvase complex ATP binding four-way junction DNA binding four-way junction helicase activity Pseudomonas putida Cytoplasm DNA damage DNA recombination DNA repair DNA-binding Reference proteome MIGRLRGTLA MIGRLRGTLAEKQPPHLII... |
regulation of DNA-templated transcription | cytoplasm | DNA binding | Pseudomonas putida | Cytoplasm DNA-binding Reference proteome Transcription Transcription regulation | MAGHSKWANI | MAGHSKWANIKHRKERQDAKRGKVFTKWIRELTVAAKQGGPDPASNPRLRLALDKALGANMSRDIIDRAVARGAGTNESDNVEELSYEGYGPGGVAIMVEAMTDNRNRTAAAVRHAFTKCGGNLGTDGSVAYLFERKGQISFAPGVEEDALMEAAMEADADDVVANDDGSFDVFTSFNSFYAVRNALEEAGFKAADAEIVMQPTTSAELDQDGAEKVLKLIDMLEDLDDVQNVYSNAQISDEIMENLG | regulation of DNA-templated transcription cytoplasm DNA binding Pseudomonas putida Cytoplasm DNA-binding Reference proteome Transcription Transcription regulation MAGHSKWANI MAGHSKWANIKHRKERQDAKRGKVFTKWIRELTVAAKQGGPDPASNPRLRLALDKALGANMSRDIIDRAVARGAGTNESDNVEELSYEGYGPGGVAIMVEAMTDNRNRTAAAVRHAFTKCGGNLGTDGSVAYLFERKGQISFAPGV... |
prolyl-tRNA aminoacylation | cytoplasm | aminoacyl-tRNA editing activity ATP binding proline-tRNA ligase activity | Pseudomonas putida | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MRTSQYLLAT | MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGALEVLMPSIQPAELWQESGRWEQYGPELLRLKDRHQRDFCVGPTHEEVITDLARNELSSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADQASLQETYDRMHQAYSNVFTRLGLDFRPVQADTGSIGGSYSHEFHVLAESGEDDVIFSDSSDYAANIEKAEAIPRETVRPAPTEELRLVDTPNAKTIAQLVENHGLPIEKTVKTLIVRGAEEGKLIALIVRGDHELNEIKATKLEQVADPLVMA... | prolyl-tRNA aminoacylation cytoplasm aminoacyl-tRNA editing activity ATP binding proline-tRNA ligase activity Pseudomonas putida Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MRTSQYLLAT MRTSQYLLATQKETPADAVVISHQLMLRAGMIRKLASGLYTWLPMGLRVMRKVEAVVREEMNAAGA... |
dicarboxylic acid transport | plasma membrane | symporter activity | Pseudomonas putida | Cell inner membrane Cell membrane Membrane Reference proteome Symport Transmembrane Transmembrane helix Transport | MTTRQPLYKS | MTTRQPLYKSLYVQVLVAITIGILLGHYYPETGVALKPLGDGFVKLIKMVIAPIIFCTVVSGIAGMQSMKSVGKTGGYALLYFEIVSTIALIIGLVVVNVVKPGAGMHIDVSTLNASSVAAYAAAGAQQTTVGFLLNVIPNTVVGAFANGDILQVLMFSVLFGFALHRLGSYGKPVLDMIDRFAHVMFNIINMIMKLAPIGAFGAMAFTIGQYGVGSLVQLGYLMACFYITCLLFVLVVLGGICRAHGFSVIKLIRYIREELLIVLGTSSSESALPRMLAKMERLGAKKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQ... | dicarboxylic acid transport plasma membrane symporter activity Pseudomonas putida Cell inner membrane Cell membrane Membrane Reference proteome Symport Transmembrane Transmembrane helix Transport MTTRQPLYKS MTTRQPLYKSLYVQVLVAITIGILLGHYYPETGVALKPLGDGFVKLIKMVIAPIIFCTVVSGIAGMQSMKSVGKTGGYALLYFEIVSTIALIIGLVVVNVVKPGAGMHIDVST... |
regulation of pH | plasma membrane | antiporter activity sodium ion transmembrane transporter activity | Pseudomonas putida | Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Transmembrane Transmembrane helix Transport | MEGLQPVRSL | MEGLQPVRSLFTRFFQLEAASGLLLIAAAVLALIINNSPLSYLYGGLLEVPVAVQVGALNIAKPLLLWINDGLMALFFLLIGLEVKREVVDGHLSKPSQVILPATAAVGGMVVPALIYWFINRDNPAAVAGWAIPTATDIAFALGVLALLGKRVPVSLKLFLMTLAIIDDLGAIIVIALFYSGTLSSVSLLLAAACLLVLVAMNRLGVIKLGPYMIVGLILWVCVLKSGVHATLAGVALAFCIPLRTRNAESSPLLALEHALHPWVAYAILPIFAFANAGVSLAGMTVDSFTHPVPMGITIGLLLGKTVGVFGLTWVAVK... | regulation of pH plasma membrane antiporter activity sodium ion transmembrane transporter activity Pseudomonas putida Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Transmembrane Transmembrane helix Transport MEGLQPVRSL MEGLQPVRSLFTRFFQLEAASGLLLIAAAVLALIINNS... |
DNA catabolic process | cytoplasm; exodeoxyribonuclease VII complex | exodeoxyribonuclease VII activity nucleic acid binding | Pseudomonas putida | Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome | MIKDPFERLG | MIKDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHMYFTLKDSGAQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFEALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTAVQGREAIAQIVRAIRLADSLGFDALILARGGGSLEDLWCFNEEAVARAVAACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLRQRLDGLQRRLLLRMQNRLTHDRLRLESLTRRLRHPGERLRQRAQ... | DNA catabolic process cytoplasm; exodeoxyribonuclease VII complex exodeoxyribonuclease VII activity nucleic acid binding Pseudomonas putida Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome MIKDPFERLG MIKDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHMYFTLKDSGAQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVE... |
arginine catabolic process to ornithine | cytoplasm | arginine deiminase activity | Pseudomonas putida | Arginine metabolism Cytoplasm Hydrolase Reference proteome | MSAEKQKYGV | MSAEKQKYGVHSEAGKLRKVMVCAPGLAHKRLTPSNCDELLFDDVIWVDQAKRDHFDFVTKMRERGVDVLEMHNLLTDIVQNKEALKWILDRKITPDTVGVGLTNEVRSWLEGLEPRHLAEFLIGGVAGQDLPQSEGADVVKMYNDYLGHSSFILPPLPNTQFTRDTTCWIYGGVTLNPMYWPARRQETLLTTAIYKFHKEFTEADFQVWYGDPDKDHGNATLEGGDVMPIGNGIVLIGMGERTSRQAIGQLAQNLFAKGAVKEVIVAGLPKSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFIIRPDESKPYGMDVRR... | arginine catabolic process to ornithine cytoplasm arginine deiminase activity Pseudomonas putida Arginine metabolism Cytoplasm Hydrolase Reference proteome MSAEKQKYGV MSAEKQKYGVHSEAGKLRKVMVCAPGLAHKRLTPSNCDELLFDDVIWVDQAKRDHFDFVTKMRERGVDVLEMHNLLTDIVQNKEALKWILDRKITPDTVGVGLTNEVRSWLEGLEPRHLAEFLIGGVAGQDLPQSEGADVVKMYNDYLGHSSF... |
histidine biosynthetic process | cytoplasm | ATP binding ATP phosphoribosyltransferase activity | Pseudomonas putida | Amino-acid biosynthesis ATP-binding Cytoplasm Glycosyltransferase Histidine biosynthesis Nucleotide-binding Reference proteome Transferase | MLTIALSKGR | MLTIALSKGRILDDTLPLLAEAGIVPTENPDKSRKLIIPTTQDDVRLLIVRATDVPTYVEHGAADLGVAGKDVLMEYGGQGLYEPLDLQIAQCKLMTAGVVGAAEPKGRLRVATKFVNVAKRYYAEQGRQVDIIKLYGSMELAPLINLADKIIDVVDTGNTLRANGLEPQELIATISSRLVVNKASMKMQHARIQSLIDTLRAAVESRHRG | histidine biosynthetic process cytoplasm ATP binding ATP phosphoribosyltransferase activity Pseudomonas putida Amino-acid biosynthesis ATP-binding Cytoplasm Glycosyltransferase Histidine biosynthesis Nucleotide-binding Reference proteome Transferase MLTIALSKGR MLTIALSKGRILDDTLPLLAEAGIVPTENPDKSRKLIIPTTQDDVRLLIVRATDVPTYV... |
translation | glutamyl-tRNA(Gln) amidotransferase complex | ATP binding glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | Pseudomonas putida | ATP-binding Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MHQLTLAEIA | MHQLTLAEIARGLADKSFSSEELTGALLARIKQLDPQINSFISVTEDLALGQARAADARRAAGETSALLGAPIAHKDLFCTNGVRTSCGSKMLDNFKAPYDATVVAKLAEAGMVTLGKTNMDEFAMGSANESSHYGAVKNPWNLEHVPGGSSGGSAAAVAARLLPATTGTDTGGSIRQPAALTNLTGLKPTYGRVSRWGMIAYASSLDQGGPLARTAEDCALLLQGMAGFDAKDSTSIEEPVPDYSASLNASLQGLRIGLPKEYFGAGLDPRIADLVQASVKELEKLGAVVKEISLPNMQHAIPAYYVIAPAEASSNLSR... | translation glutamyl-tRNA(Gln) amidotransferase complex ATP binding glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity Pseudomonas putida ATP-binding Ligase Nucleotide-binding Protein biosynthesis Reference proteome MHQLTLAEIA MHQLTLAEIARGLADKSFSSEELTGALLARIKQLDPQINSFISVTEDLALGQARAADARRAAGETSALLGAPIAHKDLFCTNGVRT... |
regulation of translational termination | cytoplasm | GTP binding GTPase activity guanosine tetraphosphate binding translation release factor activity, codon specific | Pseudomonas putida | Cytoplasm GTP-binding Nucleotide-binding Protein biosynthesis Reference proteome | MTNQAAEVAK | MTNQAAEVAKRRTFAIISHPDAGKTTITEKLLLMGKAIAVAGTVKSRKSDRHATSDWMEMEKQRGISITTSVMQFPYREHMINLLDTPGHEDFSEDTYRTLTAVDSALMVLDGGKGVEPRTIALMDVCRLRDTPIVSFINKLDRDIRDPIELLDEIEAVLKIKAAPITWPIGCYRDFKGVYHLTGDYIVVYTPGHGHERTEAKIIQKLDSDEARAHLGDQYDSFVEQLELVQGACHEFNQEEFINGQLTPVFFGTALGNFGVDHVLDAVVDWAPRPLGRVAHERTVEPVEEKFTGFVFKIQANMDPKHRDRIAFMRICSG... | regulation of translational termination cytoplasm GTP binding GTPase activity guanosine tetraphosphate binding translation release factor activity, codon specific Pseudomonas putida Cytoplasm GTP-binding Nucleotide-binding Protein biosynthesis Reference proteome MTNQAAEVAK MTNQAAEVAKRRTFAIISHPDAGKTTITEKLLLMGKAIAVAGTVKS... |
histidyl-tRNA aminoacylation | cytoplasm | ATP binding histidine-tRNA ligase activity | Pseudomonas putida | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MSKSLQAIRG | MSKSLQAIRGMNDILPEQSPLWRYFEGTVAGLLDTYGYSQIRTPIVEFTELFKRSIGEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLEHGITGNGQVQKLWYIGQMFRHERPQKGRYRQFHQIGVEVFNLDGPDIDAELIMLTWRLWGLLGIQDAVKLELNSLGTSEARARYRDALVEFLSARLEQLDEDSQRRLKSNPLRILDSKDQNTQAVLVGAPKLEDYLDEESRVHFEGLKARLDAAGIPFVINTKLVRGLDYYSKTVFEWVTDKLGAQGTVCAGGRYDGLVEQMGGKPTTGVGFAMGIERLILLLETL... | histidyl-tRNA aminoacylation cytoplasm ATP binding histidine-tRNA ligase activity Pseudomonas putida Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MSKSLQAIRG MSKSLQAIRGMNDILPEQSPLWRYFEGTVAGLLDTYGYSQIRTPIVEFTELFKRSIGEVTDIVEKEMYTFEDRNGDSLTLRPEGTAACVRAVLE... |
queuosine biosynthetic process | cytoplasm | S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity | Pseudomonas putida | Cytoplasm Queuosine biosynthesis Reference proteome S-adenosyl-L-methionine Transferase | MRVADFSFEL | MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPTGALAHRQFPDLLDYLRPGDLMVFNNTRVIPARLFGQKASGGKLEVLVERVLDSHRVLAHVRASKAPKVGAVILIDGGGEAEMVARHDTLFELRFTEEVLPLLDRVGHMPLPPYIDRPDEGADRERYQTVYAQRAGAVAAPTAGLHFDEALLEKIADKGVERAFVTLHVGAGTFQPVRVDKIEDHHMHKEWLEVGQDVVDAIEACRARGGRVIAVGTTSVRSLESAARDGVLKAFSGDTDIFIYPGRPFHVVDCLVTNFHLPESTLLMLVSAFAGYPETMAAYAAA... | queuosine biosynthetic process cytoplasm S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity Pseudomonas putida Cytoplasm Queuosine biosynthesis Reference proteome S-adenosyl-L-methionine Transferase MRVADFSFEL MRVADFSFELPDSLIARHPLAERHGSRLLVLDGPTGALAHRQFPDLLDYLRPGDLMVFNNTRVIPARLFGQKASGGKLEVLVERVLDSHRVLAHVRA... |
translation | ribonucleoprotein complex; ribosome | 5S rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MTEFTLNAQA | MTEFTLNAQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFSHVLELNVDGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFINEEAPVKKGGEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDLKAPKGVEFVALAHGDDKAVANVHAPRVAPEAEGAAE | translation ribonucleoprotein complex; ribosome 5S rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MTEFTLNAQA MTEFTLNAQARTDLGKGASRRLRHSANIPAVVYGGNQDAQSLTILAKEITKLFENEAAFSHVLELNVDGAKQNVVVKALQRHPAKGFIMHADFVRVVAGQKLTAKVPVHFI... |
translation | cytoplasm | aminoacyl-tRNA hydrolase activity | Pseudomonas putida | Cytoplasm Hydrolase Reference proteome | MTAIQLIVGL | MTAIQLIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIPTTYMNRSGQSVAALANFFRIKPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQLGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAKAMRELHSQKA | translation cytoplasm aminoacyl-tRNA hydrolase activity Pseudomonas putida Cytoplasm Hydrolase Reference proteome MTAIQLIVGL MTAIQLIVGLGNPGPEYEQTRHNAGALFVERLASAQRVSLTADKKYFGLTAKFSHQGNDVRLLIPTTYMNRSGQSVAALANFFRIKPEAILVAHDELDLPPGVAKLKRGGGHGGHNGLRDIIAQLGNQNDFHRLRLGIGHPGDAKLVSNFVLGRAPRAEQEKLDASIDFALGVLPDVLAGDFAKAMRELHSQKA |
translation | ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MAHKKAGGST | MAHKKAGGSTRNGRDSESKRLGVKMYGGQVIKPGNIIVRQRGTEFHAGYGVGMGKDHTLFAKIEGVIKFEKKGEFMRRYVSIVAA | translation ribonucleoprotein complex; ribosome structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MAHKKAGGST MAHKKAGGSTRNGRDSESKRLGVKMYGGQVIKPGNIIVRQRGTEFHAGYGVGMGKDHTLFAKIEGVIKFEKKGEFMRRYVSIVAA |
translation | cytoplasm; ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSYAVIVTGG | MSYAVIVTGGKQYKVAEGEFLKIEKLEVATGESVTFDRVLLVANGEEVTIGAPVVAGAKVVAEVVSQGRHDKVRIIKFRRRKHHMKRMGHRQWFTEIKITGIQA | translation cytoplasm; ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSYAVIVTGG MSYAVIVTGGKQYKVAEGEFLKIEKLEVATGESVTFDRVLLVANGEEVTIGAPVVAGAKVVAEVVSQGRHDKVRIIKFRRRKHHMKRMGHRQWFTEIKITGIQ... |
translation | ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MANTPSAKKR | MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDAEKAQAAYVLAVPVIDRMADKGIIHKNKAARHKGRLNGHIKALKEAAAA | translation ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MANTPSAKKR MANTPSAKKRAKQAEKRRSHNASLRSMVRTYIKNVVKAIDAKDAEKAQAAYVLAVPVIDRMADKGIIHKNKAARHKGRLNGHIKALKEAAAA |
DNA catabolic process | cytoplasm; exodeoxyribonuclease VII complex | exodeoxyribonuclease VII activity | Pseudomonas putida | Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome | MARKKASLDF | MARKKASLDFEQSLADLQALVERLENGELSLEESLAAFEQGIALTRDCQGALAQAEQKVQILLERDGELAAQPFDAEPEA | DNA catabolic process cytoplasm; exodeoxyribonuclease VII complex exodeoxyribonuclease VII activity Pseudomonas putida Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome MARKKASLDF MARKKASLDFEQSLADLQALVERLENGELSLEESLAAFEQGIALTRDCQGALAQAEQKVQILLERDGELAAQPFDAEPEA |
translation | ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MRHRKSGRHL | MRHRKSGRHLSRTSSHRKAMFQNMAVSLIEHELIKTTLPKAKELRRVAEPLITLAKEDSVANRRLAFDRTRSKSAVGKLFNDLGKRYATRQGGYLRILKCGFRAGDNAPMAYVELVDRPVGGAVEAAE | translation ribonucleoprotein complex; ribosome structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MRHRKSGRHL MRHRKSGRHLSRTSSHRKAMFQNMAVSLIEHELIKTTLPKAKELRRVAEPLITLAKEDSVANRRLAFDRTRSKSAVGKLFNDLGKRYATRQGGYLRILKCGFRAGDNAPMAYVELVDRPVGGAVEAAE |
translation | small ribosomal subunit | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MARYIGPKCK | MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQRRGRQSDYGTQLREKQKVRRIYGVLERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLVSHKAISVNGKTVNIPSYQVRPGDVVAVREKSLGQLRIVQALELCAQRGRVEWVDVDAAKKSGVFKNVPARSDLSADINENLIVELYSK | translation small ribosomal subunit rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MARYIGPKCK MARYIGPKCKLSRREGTDLFLKSGVRALESKCNIEAAPGIHGQRRGRQSDYGTQLREKQKVRRIYGVLERQFRGYYQAAASKKGATGENLLQLLECRLDNVVYRMGFGSTRSESRQLVSHKAISVN... |
translation | ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome tRNA binding | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MARIAGVNIP | MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEVAKFTTEGDLRRDINMKIKRLMDLGCYRGLRHRKGLPVRGQRTKTNARTRKGPRKPIRK | translation ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome tRNA binding Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MARIAGVNIP MARIAGVNIPDNKHTVISLTYIYGVGRTTAQKICADAGVNPAAKIKDLSDEQIETLRGEVAKFTTEGDLRRDINMKIKRLMDLGCYRG... |
translation | large ribosomal subunit | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MKLNDLSPAP | MKLNDLSPAPGSRREKHRPGRGIGSGLGKTGGRGHKGQTSRSGGSIAPGFEGGQQPLHRRLPKFGFVSLKAMDRAEVRLSELAKVEGDVISVQSLKDANVINQHIQRVKIMLSGEVTRAVTIKGIAATKGARAAIEAAGGKFEE | translation large ribosomal subunit rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MKLNDLSPAP MKLNDLSPAPGSRREKHRPGRGIGSGLGKTGGRGHKGQTSRSGGSIAPGFEGGQQPLHRRLPKFGFVSLKAMDRAEVRLSELAKVEGDVISVQSLKDANVINQHIQRVKIMLSGEVTRAVTIKGIA... |
translation | large ribosomal subunit | structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein | MATVKVTLIK | MATVKVTLIKSVSGRLPNHKLCVKGLGLRRIGHTVEVQDTPENRGMINKAYYMLKVEG | translation large ribosomal subunit structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein MATVKVTLIK MATVKVTLIKSVSGRLPNHKLCVKGLGLRRIGHTVEVQDTPENRGMINKAYYMLKVEG |
translation | cytoplasm; small ribosomal subunit | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MANNDQKRDE | MANNDQKRDEGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAARRNMIQVDLKGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRGKSVEEIF | translation cytoplasm; small ribosomal subunit rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MANNDQKRDE MANNDQKRDEGYIEKLVQVNRVAKTVKGGRIFTFTALTVVGDGKGRVGFGRGKSREVPAAIQKAMEAARRNMIQVDLKGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAV... |
translation | cytoplasm; ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MTDKKVIRLR | MTDKKVIRLRRARKARLKMHELEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKDLRDGATGNIDAATKVGKLVAERAKAAGVSQVAFDRSGFKYHGRVKALADAAREGGLEF | translation cytoplasm; ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MTDKKVIRLR MTDKKVIRLRRARKARLKMHELEVVRLCVFRSSQHIYAQVISADGSKVLASASTLDKDLRDGATGNIDAATKVGKLVAERAKAAGVSQVAFDRSGFKYHGRVK... |
translation | ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Pseudomonas putida | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSRVAKNPVK | MSRVAKNPVKLPSGVEVKFAGQQLSVKGAKGTLELNVHSSVEVTEESGELRFVARNGDQQARAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLALGFSHPVDYELPAGITAETPSQTDILIKGIDKQLVGQVAAEIRDFRPPEPYKGKGVRYADEVVRRKEAKKK | translation ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Pseudomonas putida Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSRVAKNPVK MSRVAKNPVKLPSGVEVKFAGQQLSVKGAKGTLELNVHSSVEVTEESGELRFVARNGDQQARAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLALGFSHPVD... |
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