Biological Process stringlengths 7 1.01k | Cellular Component stringlengths 6 867 | Molecular Function stringlengths 11 871 | Organism stringlengths 8 73 | Keywords stringlengths 1 810 | Sequence 10 stringlengths 5 10 | Sequence stringlengths 5 1.02k | Combined stringlengths 136 3.91k |
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ubiquitin-dependent protein catabolic process via the N-end rule pathway | cytoplasm | arginyl-tRNA--protein transferase activity leucyl-tRNA--protein transferase activity | Shewanella oneidensis | Acyltransferase Cytoplasm Reference proteome Transferase | MNSNANNTPI | MNSNANNTPIAIGISQVFPCSYLDGQQEQLLVIQEETLDPILFERLLAIGFRRSGSAIYKPRCPRCSACQPIRVPIQEFVPSKRQKRTLAHNRDLTWRITTEHTETQYALYEKYIRERHFDGPMYPPSKAQYEQFLFCHWLPPTFIEVYDDNRLVAVAVTDTLPNSFSAIYSYFDPDEERRSLGVLLILLQCRLAKLQGKAFLYLGYQIDANRKMSYKRLYRPYQILTHQGWEYSQVC | ubiquitin-dependent protein catabolic process via the N-end rule pathway cytoplasm arginyl-tRNA--protein transferase activity leucyl-tRNA--protein transferase activity Shewanella oneidensis Acyltransferase Cytoplasm Reference proteome Transferase MNSNANNTPI MNSNANNTPIAIGISQVFPCSYLDGQQEQLLVIQEETLDPILFERLLAIGFRRSGSAIYKPR... |
post-transcriptional regulation of gene expression | cytosol | RNA strand annealing activity RNA strand-exchange activity | Shewanella oneidensis | Chaperone Cytoplasm Reference proteome RNA-binding | MESTDKLTDT | MESTDKLTDTNAILAYLYETFPLCFIAEGETKPLKIGLFQDLAERLADDSKVSKTQLRVALRRYTSSWRYLKSVKAGAQRVDLDGQPCGELEQEHIDHAQAMLKESQEKAKAKRAAQTPKAAPAGKAPAKKAPKKVAVPARKTERPAKAAPKVEPVVNLVQAQLTDLAKKQRVNVKLGMTPVAGVITDINKEDIHVQLDSGLTIKVKAEHILL | post-transcriptional regulation of gene expression cytosol RNA strand annealing activity RNA strand-exchange activity Shewanella oneidensis Chaperone Cytoplasm Reference proteome RNA-binding MESTDKLTDT MESTDKLTDTNAILAYLYETFPLCFIAEGETKPLKIGLFQDLAERLADDSKVSKTQLRVALRRYTSSWRYLKSVKAGAQRVDLDGQPCGELEQEHIDHAQAMLKESQEKAKAKRAAQT... |
DNA recombination DNA repair | cytoplasm; Holliday junction helicase complex; Holliday junction resolvase complex | ATP binding four-way junction DNA binding four-way junction helicase activity | Shewanella oneidensis | Cytoplasm DNA damage DNA recombination DNA repair DNA-binding Reference proteome | MIGRLRGVLI | MIGRLRGVLIEKQAPEVLIDVNGVGYELQMPLTSFYELPELNQPTTVYTHFVVREDAQLLYGFITKQERSLFRLLIKANGVGPKLALTILSGMTASEFVGCVERDDIVTLVKLPGVGKKTAERLLVEMRDKLKSLMEASVGSEREFVLQSNYSPAPVVNSAEEDAISALISLGYKPPQASKAVSAAFKEGMDSETLIKAALKSML | DNA recombination DNA repair cytoplasm; Holliday junction helicase complex; Holliday junction resolvase complex ATP binding four-way junction DNA binding four-way junction helicase activity Shewanella oneidensis Cytoplasm DNA damage DNA recombination DNA repair DNA-binding Reference proteome MIGRLRGVLI MIGRLRGVLIEKQAPE... |
DNA recombination regulation of DNA-templated transcription regulation of translation | chromosome; cytosol | DNA binding structural constituent of chromatin | Shewanella oneidensis | DNA recombination DNA-binding Reference proteome Transcription Transcription regulation Translation regulation | MTKSELIEKL | MTKSELIEKLATRQSQLSAKEVEGAIKEMLEQMATTLESGDRIEIRGFGSFSLHYRAPRTGRNPKTGSSVELEGKYVPHFKPGKELRERVDAVNV | DNA recombination regulation of DNA-templated transcription regulation of translation chromosome; cytosol DNA binding structural constituent of chromatin Shewanella oneidensis DNA recombination DNA-binding Reference proteome Transcription Transcription regulation Translation regulation MTKSELIEKL MTKSELIEKLATRQSQLSAKEV... |
negative regulation of DNA-templated DNA replication initiation regulation of DNA-templated transcription | cytoplasm | DNA binding | Shewanella oneidensis | Cytoplasm DNA replication inhibitor DNA-binding Reference proteome | MKYIEVDEEL | MKYIEVDEELYRHIASKTERIGESASDILRRLLGLSVDTVEQAQPQAISQPSLEAATPEPQFVPQVETFVAAADFHQLVDEHKLEQQKGAVGRFLFLLESLYQLNKTQFAQILQIQGRDRLYFARSREELLKASATANPKEIGQTGFWVTTNNNTAKKRAILAEALVQFGCDAEIANGIAERV | negative regulation of DNA-templated DNA replication initiation regulation of DNA-templated transcription cytoplasm DNA binding Shewanella oneidensis Cytoplasm DNA replication inhibitor DNA-binding Reference proteome MKYIEVDEEL MKYIEVDEELYRHIASKTERIGESASDILRRLLGLSVDTVEQAQPQAISQPSLEAATPEPQFVPQVETFVAAADFHQLVDEHKLEQQKGAVG... |
translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MPRVKRGVTA | MPRVKRGVTARARHKKVLKLAKGYYGARSRTYRVAVQAVTKAGQYAYRDRRQKKRQFRQLWIARINAAARQNGLSYSRFINGLKKASIEIDRKILADIAVFDKVVFATLVEKAKEALN | translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MPRVKRGVTA MPRVKRGVTARARHKKVLKLAKGYYGARSRTYRVAVQAVTKAGQYAYRDRRQKKRQFRQLWIARINAAARQNGLSYSRFINGLKKASIEIDRKILADIAVFDKVVFATLVEKA... |
translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MPKMKTDRGV | MPKMKTDRGVAKRFKKTANGFKRKQAHLRHILTKKSTKRKRHLRNKCLVAKVDVPAIARQLPYA | translation cytosolic large ribosomal subunit structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MPKMKTDRGV MPKMKTDRGVAKRFKKTANGFKRKQAHLRHILTKKSTKRKRHLRNKCLVAKVDVPAIARQLPYA |
ribosome disassembly | cytosol | ribosome binding translation initiation factor activity | Shewanella oneidensis | Cytoplasm Initiation factor Protein biosynthesis Reference proteome | MKIKKTAGRQ | MKIKKTAGRQLAPNRINEEITGVPEVRLTGIDGEAIGVVSIRDAQNLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTDENDYQVKLRNLIRFLEDGDKAKITLRFRGREMAHQNLGMDLLNRIKTDLDEYAVVESFPKMEGRQAIMVLAPKKK | ribosome disassembly cytosol ribosome binding translation initiation factor activity Shewanella oneidensis Cytoplasm Initiation factor Protein biosynthesis Reference proteome MKIKKTAGRQ MKIKKTAGRQLAPNRINEEITGVPEVRLTGIDGEAIGVVSIRDAQNLADEAGVDLVEISPNAEPPVCRIMDYGKFLFDKAKSAKEQKKKQKQVQVKEIKFRPGTDENDYQVKLRNLIRFLEDGDKAKITLRFRG... |
monoatomic ion transport response to antibiotic | membrane; plasma membrane | antiporter activity xenobiotic transmembrane transporter activity | Shewanella oneidensis | Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport | MKHSGFQAKR | MKHSGFQAKRLIQLALPVLIAQVTQTMMGFIDTVMAGRVSAVDMAAVAVGTSLWLPAILFVQGLLMAFTPLFAHHNGANNQKAIQPLAFQGAYLALIGGLGVMVFLASAPLVLSHMNLEPQLYNLTIGYIDGILWGAPAFVLYQVLRGCSEGISYTLPTMVIGFVGLAVNIPANYIFIYGHFGIPAMGGAGCGIATALVFWAMLIAMAIYMQFHKKFAALAPFSQFHRPDFATMKKMTKLGLPIAMALFFEVSLFAIIALLLAPLGATVVASHQIALNFSAIVFMLPLSIGIAVSIRIGYYLGRDRADISAVVAKVGLLL... | monoatomic ion transport response to antibiotic membrane; plasma membrane antiporter activity xenobiotic transmembrane transporter activity Shewanella oneidensis Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport MKHSGFQAKR MKHSGFQAKRLIQLALPV... |
chaperone cofactor-dependent protein refolding iron-sulfur cluster assembly protein refolding | cytosol | ATP binding ATP hydrolysis activity ATP-dependent protein folding chaperone heat shock protein binding protein folding chaperone unfolded protein binding | Shewanella oneidensis | ATP-binding Chaperone Nucleotide-binding Reference proteome | MALLQIAEPG | MALLQIAEPGQSAAPHQHRLAVGIDLGTTNSLVAAVRSGVTATLPDENGQHSLPSIVRYTQEGIEVGYVAAMSSAQDPKNTIVSVKRFMGRSLTDIQSGEQSFPYQFEASENGLPLFVTPQGLVNPVQVSAEILRPLIERAEKTLGGELQGAVITVPAYFDDAQRQGTKDAASLLGVKVLRLLNEPTAAAIAYGLDSKQEGVIAIYDLGGGTFDISILRLNRGVFEVLATGGDSALGGDDFDHLLQAHMLQVWQLTDIDSQLSRQLLIEARRVKEALTYASDTEASLTLADGSVLKQVVTKAQFEGLIAALVKKTIASCR... | chaperone cofactor-dependent protein refolding iron-sulfur cluster assembly protein refolding cytosol ATP binding ATP hydrolysis activity ATP-dependent protein folding chaperone heat shock protein binding protein folding chaperone unfolded protein binding Shewanella oneidensis ATP-binding Chaperone Nucleotide-binding R... |
cluster assembly protein complex oligomerization protein folding protein maturation by iron-sulfur cluster transfer | iron-sulfur cluster transfer complex | ATPase activator activity protein-folding chaperone binding | Shewanella oneidensis | Chaperone Reference proteome | MNYFELFKFP | MNYFELFKFPPTFDIDTAVLADRYRELQRAVHPDKFANDTEQQRLLSVQRTAQVNDGYQTLKDPIRRAEHMLSLRGIDLSHETTTVKDTAFLMQQMEWREALEDIRESIDHQAIINELYDSFAAYRLKLTKLLAAQLSSGSDEDALLAADQVRKLKFMAKLQDELTRIEDALLD | cluster assembly protein complex oligomerization protein folding protein maturation by iron-sulfur cluster transfer iron-sulfur cluster transfer complex ATPase activator activity protein-folding chaperone binding Shewanella oneidensis Chaperone Reference proteome MNYFELFKFP MNYFELFKFPPTFDIDTAVLADRYRELQRAVHPDKFANDTEQQR... |
asparaginyl-tRNA aminoacylation | cytoplasm | asparagine-tRNA ligase activity ATP binding nucleic acid binding | Shewanella oneidensis | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MSIASVASVF | MSIASVASVFKGEHAVGSTVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVLKLTAGCSVIVTGDIVESPGAGQAYELQVTAVEVTGWVEDPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFATLNDIAGLAEGMLKYAFNAVLTERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEIL... | asparaginyl-tRNA aminoacylation cytoplasm asparagine-tRNA ligase activity ATP binding nucleic acid binding Shewanella oneidensis Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MSIASVASVF MSIASVASVFKGEHAVGSTVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVL... |
potassium ion transport | plasma membrane | monoatomic cation transmembrane transporter activity | Shewanella oneidensis | Cell membrane Membrane Reference proteome Repeat Transmembrane Transmembrane helix Transport | MNWLKTTLQI | MNWLKTTLQIYPEIAVFLSLAIGYWVGNKTFKGFSLGAVTATLLAAVVIGQFDITLSSNVKSIFFLMFLFAVGYGIGPQFVQGIAKDGLPQALFAVVACLFSLLFPILCAKIAGYDLGATAGFFAGTQTISASMGLATDAIVHLDLPAEESKKMFSVIPVAYAVTYIFGTVGSAIVLAQIIPKLLRIDLEAACKDYMAKNGGTTENARGEWHTYALRSYKLTEKNRAVGMTIHEFEAQFPHRKVFVEGLRHEGKVIDTDPNSKLSTGDIIAVGGEYDAFVEFFDHPDSFDETQDSELLNQPVLGVDVYVTSRGINGKTLA... | potassium ion transport plasma membrane monoatomic cation transmembrane transporter activity Shewanella oneidensis Cell membrane Membrane Reference proteome Repeat Transmembrane Transmembrane helix Transport MNWLKTTLQI MNWLKTTLQIYPEIAVFLSLAIGYWVGNKTFKGFSLGAVTATLLAAVVIGQFDITLSSNVKSIFFLMFLFAVGYGIGPQFVQGIAKDGLPQALFAVVACLF... |
translation | cytosolic large ribosomal subunit | 5S rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSYTITAQTR | MSYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINAQANDDFYTSVVTIVLDGKEVGVRAQAMQRHAFKPIIEHVDFVYA | translation cytosolic large ribosomal subunit 5S rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSYTITAQTR MSYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEPVSIVFDHKDIINAQANDDFYTSVVTIVLDGKEVGVRAQAMQRHAFKPIIEHVDFVYA |
glucan biosynthetic process | plasma membrane | hexosyltransferase activity | Shewanella oneidensis | Cell inner membrane Cell membrane Glycosyltransferase Membrane Reference proteome Transferase Transmembrane Transmembrane helix | MTVSESSVLD | MTVSESSVLDTEVLVGGSAMPNERPGPMEPQSLSQMPEGFPRRSTVANGVRSRASRRFFVVGGALLLSSFAIYEMGAVFSIGGITPLEYLMLALFAINFCWIALAFCSGIAGFLLLLKKPKPNELAQTELHTRTAILMPTYNESPDRVFSAVSVMAEALSQTGHGHAFDWFILSDTTDPEIALLEEQAFLVLRQETHKHSRVYYRRRRKNVARKAGNVADFCRRWGSRYDHLLVLDADSLMESSTITGLAQRMQADPDAGLIQTIPSLINGTTLMARLQQFAARIYGPVIGTGLGWWVQKEGNFWGHNAIIRTEAFMGAA... | glucan biosynthetic process plasma membrane hexosyltransferase activity Shewanella oneidensis Cell inner membrane Cell membrane Glycosyltransferase Membrane Reference proteome Transferase Transmembrane Transmembrane helix MTVSESSVLD MTVSESSVLDTEVLVGGSAMPNERPGPMEPQSLSQMPEGFPRRSTVANGVRSRASRRFFVVGGALLLSSFAIYEMGAVFSIGGITPL... |
beta-glucan biosynthetic process | outer membrane-bounded periplasmic space | carbohydrate binding catalytic activity | Shewanella oneidensis | Periplasm Reference proteome Signal | MVSLLRCQSF | MVSLLRCQSFKPSSIICSLALSAAFALSGTAFADESKPAENKPATPVVSPPKATAPSANKTQVRFTKTGTFDGDSVVKLARKLASKPYVVLKDPMPAGLAKLTYDEYRDIRFNPVSSIWRDQGLPFQMQMFHRGFYFQDLIEIAIVEANQATHLAYEPKYFTAGEVITQALPNDDIGYSGFRIHNQLNTNGVFDELMVFQGASYFRALGKGNAYGLSARGLALKTADPEGEEFPIFRAFWVERPSYDSNLIVVHALLDSPSVAGAYRFSVRPGDNTQIDVEATLFPRVELSKVGLAPSTSMFLHSLNGRHDTDDFRPEVH... | beta-glucan biosynthetic process outer membrane-bounded periplasmic space carbohydrate binding catalytic activity Shewanella oneidensis Periplasm Reference proteome Signal MVSLLRCQSF MVSLLRCQSFKPSSIICSLALSAAFALSGTAFADESKPAENKPATPVVSPPKATAPSANKTQVRFTKTGTFDGDSVVKLARKLASKPYVVLKDPMPAGLAKLTYDEYRDIRFNPVSSIWRDQGLPFQMQMFHRGFYF... |
DNA recombination regulation of DNA-templated transcription regulation of translation | cytosol | DNA binding structural constituent of chromatin | Shewanella oneidensis | DNA recombination DNA-binding Reference proteome Transcription Transcription regulation Translation regulation | MALTKAEMAE | MALTKAEMAEHLFETLGINKRVAKEMVESFFEEIRGALESGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPISARRVVTFRPGQKLKTRVEAANTGK | DNA recombination regulation of DNA-templated transcription regulation of translation cytosol DNA binding structural constituent of chromatin Shewanella oneidensis DNA recombination DNA-binding Reference proteome Transcription Transcription regulation Translation regulation MALTKAEMAE MALTKAEMAEHLFETLGINKRVAKEMVESFFEEI... |
histidine biosynthetic process tryptophan biosynthetic process | cytoplasm | 1-(5-phosphoribosyl)-5-imidazole-4-carboxamide isomerase activity | Shewanella oneidensis | Amino-acid biosynthesis Cytoplasm Histidine biosynthesis Isomerase Reference proteome | MIIPAIDLID | MIIPAIDLIDGKVVRLYQGDYGQQTTFDLSPLAQLQSYQAQDASWLHIVDLTGAKDPAKRQTALIAALTAGLSANIQVGGGIRTEEQVAELLSLGVKRVVIGSLAVKEPELVKGWFNKFGNEAICLALDINITPSGEKIVAVSGWQNGGGKNLESIVEDFSQVGLKHALVTDISRDGTLTGANTELYCELSSRYPNIAWQASGGIASLEDVAAVRDSGAAGIIIGKALLINQFNVAEAIQCWPNE | histidine biosynthetic process tryptophan biosynthetic process cytoplasm 1-(5-phosphoribosyl)-5-imidazole-4-carboxamide isomerase activity Shewanella oneidensis Amino-acid biosynthesis Cytoplasm Histidine biosynthesis Isomerase Reference proteome MIIPAIDLID MIIPAIDLIDGKVVRLYQGDYGQQTTFDLSPLAQLQSYQAQDASWLHIVDLTGAKDPAKRQT... |
DNA damage response nucleotide-excision repair SOS response | cytoplasm; excinuclease repair complex | DNA binding excinuclease ABC activity | Shewanella oneidensis | Cytoplasm DNA damage DNA excision DNA repair Excision nuclease Reference proteome SOS response | MSTGFNAQSF | MSTGFNAQSFLRTVTSSAGVYRMYDVKGDVIYVGKAKDLKKRLSSYFRKNLGNVKTQALVSHIHHIDVTLTHSETDALLLENDYIKQYMPKYNVLLRDDKSYPYILLSQHEHPRLAYHRGPQREKGHYFGPYPNGGAVRESLHLMQKLFPIRQCDDLYYKSRTRPCLQYQLSRCSAPCVGKVSNAEYDEQVKLASLFLKGKDKQVISELVAKMEEAAEQQAYEQAARFRDQIMALRRVAEQQEVSGNTGDMDVIGVHYASGIACFHLLFIREGKIFGSRSYYPTVPAQTDIEEVLRSFLLQFYLNADIQRTIPKEVVISH... | DNA damage response nucleotide-excision repair SOS response cytoplasm; excinuclease repair complex DNA binding excinuclease ABC activity Shewanella oneidensis Cytoplasm DNA damage DNA excision DNA repair Excision nuclease Reference proteome SOS response MSTGFNAQSF MSTGFNAQSFLRTVTSSAGVYRMYDVKGDVIYVGKAKDLKKRLSSYFRKNLGNVK... |
glutaminyl-tRNA aminoacylation glutamyl-tRNA aminoacylation | cytosol | ATP binding glutamine-tRNA ligase activity | Shewanella oneidensis | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MSHVDTEVRP | MSHVDTEVRPSNFIRNIIDEDLKSGKHTNVQTRFPPEPNGYLHIGHAKSICLNFGIARDYQGLCNLRFDDTNPEKEDIDYVNSIQADVRWLGFQWDGEVRYSSNYFDQLHQYAVELINKGLAYVCFLNADETREYRGTLKEPGKNSPYRDTPVEENLRLFGKMRLGEFKEGECALRAKIDMASPFMCMRDPVIYRIRFAHHHQTGDKWCIYPMYDFTHCISDALEHITHSLCTLEFQDNRRLYDWVLDNLDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVTRKLVTGWDDPRMPTIAGLRRRGYTPASIREFCQRIG... | glutaminyl-tRNA aminoacylation glutamyl-tRNA aminoacylation cytosol ATP binding glutamine-tRNA ligase activity Shewanella oneidensis Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MSHVDTEVRP MSHVDTEVRPSNFIRNIIDEDLKSGKHTNVQTRFPPEPNGYLHIGHAKSICLNFGIARDYQG... |
bacterial-type flagellum-dependent swarming motility | cytosol | phosphatase activity phosphoric ester hydrolase activity zinc ion binding | Shewanella oneidensis | Hydrolase Metal-binding Reference proteome Zinc | MQYPVDTHTH | MQYPVDTHTHTVASSHAYSTIHDYLAVAKQKGVRLFATTDHGPAMADAPHFWHFVNLRVLPRMVDGVGILRGIEANIKNRDGEIDYFGDYLSQLDIVLAGFHEPVFAPSDKVTHTEAMINTIRSGKVDIITHPGNPAYPIDIEAVVTAAAQYGVALEINNSSFEVSRKGSEANCTAIAKAAKALGATLVMGSDSHVAFSLGGFDRALSIIDAVDYPKDKLLNRSPMALLDFLTLRGHQTVADFIPHFRDEAI | bacterial-type flagellum-dependent swarming motility cytosol phosphatase activity phosphoric ester hydrolase activity zinc ion binding Shewanella oneidensis Hydrolase Metal-binding Reference proteome Zinc MQYPVDTHTH MQYPVDTHTHTVASSHAYSTIHDYLAVAKQKGVRLFATTDHGPAMADAPHFWHFVNLRVLPRMVDGVGILRGIEANIKNRDGEIDYFGDYLSQLDIVLAGFHEP... |
tRNA modification | cytoplasm | ATP binding ligase activity, forming carbon-nitrogen bonds | Shewanella oneidensis | ATP-binding Cytoplasm Ligase Nucleotide-binding Reference proteome tRNA processing | MTAQDLSVHI | MTAQDLSVHIARWLDSLPLQAGSKLVLAYSGGVDSEVLAYGLSEYAKQRPDLRYQLIYVHHGLSPNADNWAKHCQARAAIYGLPVTVERVQLILGPRVSVEAEARKARYQAILPHLNPQDILLTAHHEDDQLETILLALKRGQGPKGLAAMGQIQPLSLADKGSCLQVRPLLDISREMIETFAQTRQLVHIEDESNQDDKYDRNFLRLEIIPRLKARWPSIATTASRSAQLCAEQQAIVETEVSERLPKLLVKAPVTEQTVLKLSELAAQPIEWQGILLRGFIESQEFSLPSYVQLQQMLQQLIHAKEDAKVHIRINDCV... | tRNA modification cytoplasm ATP binding ligase activity, forming carbon-nitrogen bonds Shewanella oneidensis ATP-binding Cytoplasm Ligase Nucleotide-binding Reference proteome tRNA processing MTAQDLSVHI MTAQDLSVHIARWLDSLPLQAGSKLVLAYSGGVDSEVLAYGLSEYAKQRPDLRYQLIYVHHGLSPNADNWAKHCQARAAIYGLPVTVERVQLILGPRVSVEAEARKARYQAILPHLN... |
cytoplasmic translational termination translation | cytoplasm; cytosol | ribosomal large subunit binding | Shewanella oneidensis | Cytoplasm Protein biosynthesis Reference proteome | MIADIKKDAQ | MIADIKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDARTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRVAIRNVRRDAISDVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEILAAKEIELMEV | cytoplasmic translational termination translation cytoplasm; cytosol ribosomal large subunit binding Shewanella oneidensis Cytoplasm Protein biosynthesis Reference proteome MIADIKKDAQ MIADIKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVEDARTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAEAEGGRVAIRNVRRDAI... |
translational elongation | cytoplasm | translation elongation factor activity | Shewanella oneidensis | Cytoplasm Elongation factor Protein biosynthesis Reference proteome | MAISAAQVKE | MAISAAQVKELRERTGAGMMDCKKALEETNGDMELAIDNMRKSGAAKAAKKAGNIAADGTILIKNGEGFAVLLEVNCQTDFVAKDANFLGFANAVLDVAAASKVTLEDLKAQFEEARVALVAKIGENINVRRVEYIDGAKLASYRHGERIGVVVTGDADEETLKHLAMHVAASKPEYVNPEDVPADVVAREQALQIEISMNEGKPADIAEKMVVGRMKKFTGEISLTGQAYIMEPKKTVGEFLKEKGAKVTNFIRLEVGEGIEKKEEDFAAEVAAQIAASKKA | translational elongation cytoplasm translation elongation factor activity Shewanella oneidensis Cytoplasm Elongation factor Protein biosynthesis Reference proteome MAISAAQVKE MAISAAQVKELRERTGAGMMDCKKALEETNGDMELAIDNMRKSGAAKAAKKAGNIAADGTILIKNGEGFAVLLEVNCQTDFVAKDANFLGFANAVLDVAAASKVTLEDLKAQFEEARVALVAKIGENINVRRVEYIDGAKLASYR... |
translation | cytosolic small ribosomal subunit | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MTTVSMRDML | MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAANAGRGQDLAVQAEQDGFVEAE | translation cytosolic small ribosomal subunit structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MTTVSMRDML MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDKLTKKEALMRTRELEKLEKSLGGI... |
DNA recombination regulation of DNA recombination | bacterial nucleoid; cytoplasm | double-stranded DNA binding | Shewanella oneidensis | Cytoplasm DNA recombination Reference proteome | MWFKNLTLYR | MWFKNLTLYRFNKPFSIETEALETALADFTFSPCGSQDVSKFGFSNALGKKGSTLVHSANNRHLICVTKEEKILPAQVIKESLEEKVAQIEDEENRKLAKKEKDALKDEIITSLLPRAFSRRSQTRALILPELEMILVDSSSATKAEELLALLRKALGSLPVIPLSFKAPIESQLTEWLKNGSAPLPFEMQDEAELKSAADEGGIVRFKQQDLKEDEVLAHLETGKEVHKLALHFGQSIALLLQSDASVKRLKFSEEFRAGNDELGNEDPMARLDADFALMGSELVALMHALVSALGGIEETQA | DNA recombination regulation of DNA recombination bacterial nucleoid; cytoplasm double-stranded DNA binding Shewanella oneidensis Cytoplasm DNA recombination Reference proteome MWFKNLTLYR MWFKNLTLYRFNKPFSIETEALETALADFTFSPCGSQDVSKFGFSNALGKKGSTLVHSANNRHLICVTKEEKILPAQVIKESLEEKVAQIEDEENRKLAKKEKDALKDEIITSLLPRAFSRRSQTRALILPE... |
protein folding | cytosol | adenyl-nucleotide exchange factor activity protein homodimerization activity protein-folding chaperone binding unfolded protein binding | Shewanella oneidensis | Chaperone Cytoplasm Reference proteome Stress response | MSNESIKAEQ | MSNESIKAEQDLIHEGVESEVSTEEASLIDELTQANFRIEELEQLLADALAKVDEQKDSVIRAAAEVDNIRRRAAMDVEKANKFALEKFANELLPVLDNMERALQGTNPQDETTKAIYEGVELTQKSLLTAVAKFGVKQIDPQGQAFNPDQHQAIGMQPSAEFPTNTVMLVMQKGYELNSRLLRPAMVMVSQGGPSQESASIDIEA | protein folding cytosol adenyl-nucleotide exchange factor activity protein homodimerization activity protein-folding chaperone binding unfolded protein binding Shewanella oneidensis Chaperone Cytoplasm Reference proteome Stress response MSNESIKAEQ MSNESIKAEQDLIHEGVESEVSTEEASLIDELTQANFRIEELEQLLADALAKVDEQKDSVIRAAAEVDNIRR... |
trans-translation | cytosol | RNA binding | Shewanella oneidensis | Cytoplasm Reference proteome RNA-binding | MVKKNSKKAA | MVKKNSKKAAPATIARNKRATFEYRFEEKMEAGLSLMGWEVKSIRMGKVNLSDCYVFLKNGEAFMHGCTIIPLNTASTHVVCDPIRLKKLLLSRKELDKLAGLVERQGYSIIPISMYWRKGAWVKVEIGLGKGKKDHDKREDTKAREWEVEKARVMKKEKTRG | trans-translation cytosol RNA binding Shewanella oneidensis Cytoplasm Reference proteome RNA-binding MVKKNSKKAA MVKKNSKKAAPATIARNKRATFEYRFEEKMEAGLSLMGWEVKSIRMGKVNLSDCYVFLKNGEAFMHGCTIIPLNTASTHVVCDPIRLKKLLLSRKELDKLAGLVERQGYSIIPISMYWRKGAWVKVEIGLGKGKKDHDKREDTKAREWEVEKARVMKKEKTRG |
translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MNNIIKMLND | MNNIIKMLNDEQMKQDVPAFGAGDTVVVQVRVKEGDKERLQAFEGVVIAKRNRGLHSAFTVRKISNGEGVERAFQTHSPLIASIEVKRRGRVRRAKLYYLRDRSGKSARIREKLATK | translation cytosolic large ribosomal subunit structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MNNIIKMLND MNNIIKMLNDEQMKQDVPAFGAGDTVVVQVRVKEGDKERLQAFEGVVIAKRNRGLHSAFTVRKISNGEGVERAFQTHSPLIASIEVKRRGRVRRAKLYYLRDRSGKSARIREKLATK |
ribosomal small subunit biogenesis rRNA processing | cytoplasm; ribosome | ribosome binding | Shewanella oneidensis | Chaperone Cytoplasm Reference proteome Ribosome biogenesis rRNA processing | MSSNQQPVVL | MSSNQQPVVLGKLGSCHGIKGWLKITAYTDSVEGIFDYSPWLIKENGEWREVKVIQWRYQGKAVVAELEGVTTRERAQMLTNCEIGILPQQMNALPEDEFYWRDLIGCEVINTTGYNMGIVDQIVETGSNDVLLVKANAKDSFGKVERMVPFVPGQFILKVDVQGKQILVDWDPDF | ribosomal small subunit biogenesis rRNA processing cytoplasm; ribosome ribosome binding Shewanella oneidensis Chaperone Cytoplasm Reference proteome Ribosome biogenesis rRNA processing MSSNQQPVVL MSSNQQPVVLGKLGSCHGIKGWLKITAYTDSVEGIFDYSPWLIKENGEWREVKVIQWRYQGKAVVAELEGVTTRERAQMLTNCEIGILPQQMNALPEDEFYWRDLIGCEVINTTGYNMGIVDQI... |
translation | cytoplasm; small ribosomal subunit | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MVTIRLARGG | MVTIRLARGGAKKRPFYNIVVADSRNARDGRFIERVGFFNPLARGQEETLRLDLARVEHWVANGAATTDRVAKLIKDAKAAA | translation cytoplasm; small ribosomal subunit structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MVTIRLARGG MVTIRLARGGAKKRPFYNIVVADSRNARDGRFIERVGFFNPLARGQEETLRLDLARVEHWVANGAATTDRVAKLIKDAKAAA |
fatty acid biosynthetic process | cytoplasm | holo- synthase activity magnesium ion binding | Shewanella oneidensis | Cytoplasm Fatty acid biosynthesis Fatty acid metabolism Lipid biosynthesis Lipid metabolism Magnesium Metal-binding Reference proteome Transferase | MAIVGLGTDI | MAIVGLGTDIVEIERISAHVARSGDKLAKRVLTEAEFEIYQQHSQPSRYLAKRFAAKEAAAKALGTGIGRGVSFQHIHIGNTPDGAPTIDFTEGAQQRLTLLNGVVGHISIADEKSYAIATVILESR | fatty acid biosynthetic process cytoplasm holo- synthase activity magnesium ion binding Shewanella oneidensis Cytoplasm Fatty acid biosynthesis Fatty acid metabolism Lipid biosynthesis Lipid metabolism Magnesium Metal-binding Reference proteome Transferase MAIVGLGTDI MAIVGLGTDIVEIERISAHVARSGDKLAKRVLTEAEFEIYQQHSQPSRYLAK... |
regulation of pH | plasma membrane | sodium:proton antiporter activity | Shewanella oneidensis | Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Transmembrane Transmembrane helix Transport | MEKAIRNFLS | MEKAIRNFLSQESAGGILLLIAVAFAMLMANSPLAGFYQGFLGTEVQVRVGALDLHKPLLLWINDGLMALFFLLIGLEVKRELLEGALSSVAQASLPTFAAIGGMLVPAGIYLLFNYGDPITQAGWAIPAATDIAFALGIMALLGSRVPVALKVFLLALAIIDDLGVIVIIALFYSSDLSTVSLIIASIAIVGLVALNRKGVTSLAPYGVLGLILWVAVLKSGVHATLAGVIIAFCIPLRAKDGSSPSEHLEHSLHPWSTFLILPVFAFANAGVALGNMSLDTLMSPVPVGIALGLMLGKPIGVMLFSFVAVKLKLAQLP... | regulation of pH plasma membrane sodium:proton antiporter activity Shewanella oneidensis Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Transmembrane Transmembrane helix Transport MEKAIRNFLS MEKAIRNFLSQESAGGILLLIAVAFAMLMANSPLAGFYQGFLGTEVQVRVGALDLHKPLLLWINDGL... |
lipoprotein biosynthetic process | plasma membrane | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity | Shewanella oneidensis | Cell inner membrane Cell membrane Membrane Reference proteome Transferase Transmembrane Transmembrane helix | MALNFPNIDP | MALNFPNIDPVIVKFGPFDIFGQTFEPALRWYGFTYLVGFVAAMWLLNRQADRSNGLWSREQVSDLLFYGFLGVILGGRIGYVLFYHFDYFLASPMYLFKISEGGMSFHGGLIGVITAMIYITWKQKRTFFAVADMVAPVVPIGLGAGRIGNFINGELWGRVTDVPWAMVFPSGGPEPRHPSQLYQFALEGVALFLLLYWFSKRTKKVGAVSGMFLLGYGIFRVIVETVRQPDAQLGLYWGLMTMGQILSVPMILFGLYLILRPEGKQ | lipoprotein biosynthetic process plasma membrane phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity Shewanella oneidensis Cell inner membrane Cell membrane Membrane Reference proteome Transferase Transmembrane Transmembrane helix MALNFPNIDP MALNFPNIDPVIVKFGPFDIFGQTFEPALRWYGFTYLVGFVAAMWLLNRQADRSNGLW... |
mRNA catabolic process | cytoplasm | mRNA 5'-diphosphatase activity | Shewanella oneidensis | Hydrolase Reference proteome | MIDSDGFRAN | MIDSDGFRANVGIIICNRYGQVMWARRFGQHSWQFPQGGVDDGESAEEAMYRELYEEVGLRPEHVTVLTSTRSWLRYRLPKRLVRQDSKPVCIGQKQKWFLLQLKSQDSAINLSSSGHPEFDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAVTALSFQTQEIPKKRVRQKTTG | mRNA catabolic process cytoplasm mRNA 5'-diphosphatase activity Shewanella oneidensis Hydrolase Reference proteome MIDSDGFRAN MIDSDGFRANVGIIICNRYGQVMWARRFGQHSWQFPQGGVDDGESAEEAMYRELYEEVGLRPEHVTVLTSTRSWLRYRLPKRLVRQDSKPVCIGQKQKWFLLQLKSQDSAINLSSSGHPEFDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAVTALSFQTQEIPKKRVRQKTTG |
DNA modification mismatch repair | cytoplasm | DNA binding endonuclease activity | Shewanella oneidensis | Cytoplasm DNA damage DNA repair Endonuclease Hydrolase Nuclease Reference proteome | MKSIIPPQNL | MKSIIPPQNLSELLKRANMMAGISLAQIATHRGINVPNNLKRDKGWVGQLIEMELGATAGSKPEQDFLHLGVELKTIPIDNHGKPLETTYVCVAPLTNIEGLTWQNSLVCHKLQRVLWVPVEGERHIPVGERRIGTPTLWEPDPQEQALLQQDWEEIMELIALGKVEKLTARHGEVLQLRPKAANSKAMTHSISEDGSLKMTNPRGFYLKTAFTAMILNKVFG | DNA modification mismatch repair cytoplasm DNA binding endonuclease activity Shewanella oneidensis Cytoplasm DNA damage DNA repair Endonuclease Hydrolase Nuclease Reference proteome MKSIIPPQNL MKSIIPPQNLSELLKRANMMAGISLAQIATHRGINVPNNLKRDKGWVGQLIEMELGATAGSKPEQDFLHLGVELKTIPIDNHGKPLETTYVCVAPLTNIEGLTWQNSLVCHKLQRVLWVPVEGERHI... |
water transport | plasma membrane | water channel activity | Shewanella oneidensis | Cell inner membrane Cell membrane Membrane Reference proteome Repeat Transmembrane Transmembrane helix Transport | MNMSQKMAAE | MNMSQKMAAEFLGTLWLVLGGCGSAVLAAAFPEVGIGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLYLIASGQEGFSLAAGFASNGFGEHSPGGYSMISVMICEIVMTLFFLLVILGSTDERAPKGFAPIAIGLCLTLIHLISIPISNTSVNPARSTGPALFVGDWAVSQLWLFWAAPIIGAILAGVIYRYFNAAK | water transport plasma membrane water channel activity Shewanella oneidensis Cell inner membrane Cell membrane Membrane Reference proteome Repeat Transmembrane Transmembrane helix Transport MNMSQKMAAE MNMSQKMAAEFLGTLWLVLGGCGSAVLAAAFPEVGIGLLGVSLAFGLTVLTMAFAIGHISGCHLNPAVSFGLWAGGRFPTSELLPYIIAQVAGGIAGAGVLYLIASGQEGFSLAAGFAS... |
iron-sulfur cluster assembly protein maturation by cluster transfer | cytosol | 2 iron, 2 sulfur cluster binding 4 iron, 4 sulfur cluster binding iron ion binding | Shewanella oneidensis | Iron Iron-sulfur Metal-binding Reference proteome | MTDQADATMP | MTDQADATMPIKFTDAAAAKVKGLLEEEQNPALKLRVYVTGGGCSGFQYGFTFDEKVNEGDFTVEKQGVQLVVDPMSLQYLVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV | iron-sulfur cluster assembly protein maturation by cluster transfer cytosol 2 iron, 2 sulfur cluster binding 4 iron, 4 sulfur cluster binding iron ion binding Shewanella oneidensis Iron Iron-sulfur Metal-binding Reference proteome MTDQADATMP MTDQADATMPIKFTDAAAAKVKGLLEEEQNPALKLRVYVTGGGCSGFQYGFTFDEKVNEGDFTVEKQGVQLVVDPMS... |
translation | ribonucleoprotein complex; ribosome | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MPIIKVRENE | MPIIKVRENEPFDVALRRFKRSCEKAGILADVRAREFYEKPTTARKRAKAAAVKRLAKKLSRENARRVRLY | translation ribonucleoprotein complex; ribosome structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MPIIKVRENE MPIIKVRENEPFDVALRRFKRSCEKAGILADVRAREFYEKPTTARKRAKAAAVKRLAKKLSRENARRVRLY |
translation | cytosolic small ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSLSTEAKAK | MSLSTEAKAKILAEFGRGANDTGSTEVQVALLTAQINHLQDHFKEHIHDHHSRRGLLRMVSARRKLLAYLKRTEAVRYNELIQKLGLRR | translation cytosolic small ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSLSTEAKAK MSLSTEAKAKILAEFGRGANDTGSTEVQVALLTAQINHLQDHFKEHIHDHHSRRGLLRMVSARRKLLAYLKRTEAVRYNELIQKLGLRR |
maturation of SSU-rRNA ribosome biogenesis | cytosol | ribosomal small subunit binding | Shewanella oneidensis | Cytoplasm Reference proteome Ribosome biogenesis | MAKEFSRTRR | MAKEFSRTRRIGQQLQQELAVVLQRDMKDPRIGFVTVNDVDVSRDLSYAKVFVTFFEEDKDVVQEKLNALIAAAPYIRTLVAGRMKLRVMPEIRFVYDSSLVEGMRMSNLVSQVINSDKAKQQQFGSVDDDVIENDIEESDDTEGKV | maturation of SSU-rRNA ribosome biogenesis cytosol ribosomal small subunit binding Shewanella oneidensis Cytoplasm Reference proteome Ribosome biogenesis MAKEFSRTRR MAKEFSRTRRIGQQLQQELAVVLQRDMKDPRIGFVTVNDVDVSRDLSYAKVFVTFFEEDKDVVQEKLNALIAAAPYIRTLVAGRMKLRVMPEIRFVYDSSLVEGMRMSNLVSQVINSDKAKQQQFGSVDDDVIENDIEESDDTEGKV |
translation | cytoplasm | aminoacyl-tRNA hydrolase activity | Shewanella oneidensis | Cytoplasm Hydrolase Reference proteome | MSEIKLIVGL | MSEIKLIVGLANPGAEYVQTRHNAGAWYVEELARICGVSLVADSKYFGLTARAVLHGKDVRLLIPTTYMNLSGKAVGALANFFRITPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAKLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEILFKEDMVKAMTRLHSFKAE | translation cytoplasm aminoacyl-tRNA hydrolase activity Shewanella oneidensis Cytoplasm Hydrolase Reference proteome MSEIKLIVGL MSEIKLIVGLANPGAEYVQTRHNAGAWYVEELARICGVSLVADSKYFGLTARAVLHGKDVRLLIPTTYMNLSGKAVGALANFFRITPEEILVAHDELDMPPGVAKFKLGGGHGGHNGLKDIIAKLANDKNFYRLRIGIGHPGDKNKVSGYVLGKAPAKEQELINAAVDEAVRSTEILFKEDMVKAMTRLHSF... |
rRNA processing | cytoplasm | metalloendopeptidase activity RNA endonuclease activity zinc ion binding | Shewanella oneidensis | Cytoplasm Endonuclease Hydrolase Metal-binding Nuclease Reference proteome Ribosome biogenesis rRNA processing Zinc | MSLDLALDVQ | MSLDLALDVQYATTSDYLPSEEQLALWVKTAIGNSMKQAELTIRIVDARESQMLNGTYRGKDKPTNVLSFPFEAPPEIELPLLGDLVICASVVENEAREQDKTLEAHWAHMVVHGCLHLLGYDHIEDEEAEEMESLETQLIESLGFTDPYKEQ | rRNA processing cytoplasm metalloendopeptidase activity RNA endonuclease activity zinc ion binding Shewanella oneidensis Cytoplasm Endonuclease Hydrolase Metal-binding Nuclease Reference proteome Ribosome biogenesis rRNA processing Zinc MSLDLALDVQ MSLDLALDVQYATTSDYLPSEEQLALWVKTAIGNSMKQAELTIRIVDARESQMLNGTYRGKDKPTNVLSFPF... |
leucyl-tRNA aminoacylation | cytosol | aminoacyl-tRNA editing activity ATP binding leucine-tRNA ligase activity | Shewanella oneidensis | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MQEQYNPSEI | MQEQYNPSEIEALVQKHWHDTKTFEVTEDQNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWDSFGLPAENAAINNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYKKTASVNWCPNDETVLANEQVQDGCCWRCDTPVEQKEIPQWFIKITAYAEELLNDIDTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGSDKSFDIYTTRPDTLMGVTYVAIAAGHPLAEIAAQTNPELAAFIDECKNSTTSEAELATMEKRGVATGLYAIHPITGKQVPI... | leucyl-tRNA aminoacylation cytosol aminoacyl-tRNA editing activity ATP binding leucine-tRNA ligase activity Shewanella oneidensis Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MQEQYNPSEI MQEQYNPSEIEALVQKHWHDTKTFEVTEDQNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARF... |
L-proline biosynthetic process | cytoplasm | glutamate-5-semialdehyde dehydrogenase activity NADP binding | Shewanella oneidensis | Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline biosynthesis Reference proteome | MSQINQAQYL | MSQINQAQYLQQLGHNAKQASYALANLTASQKADLLDAIADALTENTLAILAANAKDVAAAKAEGLNDAMIDRLLLNESRLAGIIGDISDVVRLADPVGEEFGSRVLDNGLRLTRRRVPLGVIGVIYEARPNVTVDIAVLALKTGNAVILRGGKETLESNKLISEVIRGAIASQGLPVDAVQLIDSSDRALVTGLLKLDQYVDMIVPRGGQALQRLCAEQATIPVILGGIGICHLYVDKAANLERALEVIANAKVQRPTVCNALDTLLVDKTIAANFVPQIVEYLHCLGVRFSVCEQSHALLDGLGFDIELATEQSFATE... | L-proline biosynthetic process cytoplasm glutamate-5-semialdehyde dehydrogenase activity NADP binding Shewanella oneidensis Amino-acid biosynthesis Cytoplasm NADP Oxidoreductase Proline biosynthesis Reference proteome MSQINQAQYL MSQINQAQYLQQLGHNAKQASYALANLTASQKADLLDAIADALTENTLAILAANAKDVAAAKAEGLNDAMIDRLLLNESRLAGIIGDISDV... |
beta-glucan biosynthetic process | outer membrane-bounded periplasmic space | carbohydrate binding catalytic activity | Shewanella oneidensis | Periplasm Reference proteome Signal | MPSLEAPSTR | MPSLEAPSTRSRLQRMVGSVLLTCSVLLSLSACAAGKASAPQEEEFSYAWLKGYAHTLATESYVSHKGELPKSLQGMSWDDYQQFHFKKKAALWREDDSEFRAELFHLGLYFDTPVHIYQLENGKAKRIEYSPSMFDYGKSKVKGSQLPKDLGFAGFRMQFNTDWQRDVVAFLGASYFRAVGQEMQYGLSARGLAVDTALPKPEEFPMFTRFWLEKPQPGSNIATVYALLDSPSVTGAYRFDIEPGERLKMKVDAAIYPRKAIERLGVAPLTSMFMVGENDRRTGYDWRQEIHDSDGLAMHTGNGEWIWRPLGNPSNLRF... | beta-glucan biosynthetic process outer membrane-bounded periplasmic space carbohydrate binding catalytic activity Shewanella oneidensis Periplasm Reference proteome Signal MPSLEAPSTR MPSLEAPSTRSRLQRMVGSVLLTCSVLLSLSACAAGKASAPQEEEFSYAWLKGYAHTLATESYVSHKGELPKSLQGMSWDDYQQFHFKKKAALWREDDSEFRAELFHLGLYFDTPVHIYQLENGKAKRIEYSPSMFD... |
methylation tRNA processing | cytoplasm | nucleic acid binding tRNA (adenine-N6)-methyltransferase activity | Shewanella oneidensis | Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase tRNA processing | MAFTFKQFHI | MAFTFKQFHIDDLNCGMPVSTDGVILGAWSPLSQAQQILDIGAGSGLLSLMAAQRSLGRITAVELEEKAAAACLYNMVQSPWADRLSVIHCDIQDFCQQTQYHGFFDHIICNPPYFEHGPQANDSHRAMARHTNTLGFAPLLDAIIQCLTPQGYASLILPSQSMPRFKACLTSSKLHLTEEVLVKSVENKAANRVLLLLSKNRQSDYRQSELTIRGIDGLYTKHMIELTRDFYLKL | methylation tRNA processing cytoplasm nucleic acid binding tRNA (adenine-N6)-methyltransferase activity Shewanella oneidensis Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase tRNA processing MAFTFKQFHI MAFTFKQFHIDDLNCGMPVSTDGVILGAWSPLSQAQQILDIGAGSGLLSLMAAQRSLGRITAVELEEKAAAACLYNMVQSPWAD... |
glutamyl-tRNA aminoacylation tRNA modification | cytosol | ATP binding glutamate-tRNA ligase activity zinc ion binding | Shewanella oneidensis | Aminoacyl-tRNA synthetase ATP-binding Ligase Metal-binding Nucleotide-binding Reference proteome Zinc | MMATLTTAIS | MMATLTTAISPQGPYVGRFAPSPSGALHFGSLVAALGSYLRARSLGGKWLIRIEDIDPPREVKGAADDILRTLEAYGFEWDDTVLYQSARTDAYQAKLDQLLAQDDAYFCQCSRKQIQAMGGIYDGRCHQLATPHQSGAIRLVNRAQVAEFTDNLMGKVVVDHDFATEDFIIKRSDGLYAYQLAVVLDDAHQGISEVVRGCDLIEASCRQLSLYQSLGLTAPQWLHLPLACLTPGFKLSKQNHAQAIDKQHPQASLNAALTFLGQSTVEPTSAAQMLAQAVAQFELTAVPKQREIILTA | glutamyl-tRNA aminoacylation tRNA modification cytosol ATP binding glutamate-tRNA ligase activity zinc ion binding Shewanella oneidensis Aminoacyl-tRNA synthetase ATP-binding Ligase Metal-binding Nucleotide-binding Reference proteome Zinc MMATLTTAIS MMATLTTAISPQGPYVGRFAPSPSGALHFGSLVAALGSYLRARSLGGKWLIRIEDIDPPREVKGAADDIL... |
ribosome disassembly | cytoplasm | GTP binding GTPase activity guanosine tetraphosphate binding translation elongation factor activity | Shewanella oneidensis | Cytoplasm Elongation factor GTP-binding Nucleotide-binding Protein biosynthesis Reference proteome | MTELSKYRNI | MTELSKYRNIGIFAHVDAGKTTTTERILKLTGKIHKIGEVHDGESTTDFMVQEAERGITIQSAAVSCFWKDHRFNVIDTPGHVDFTVEVYRSLKVLDGGIAVFCGSGGVEPQSETNWRYANESEVARIIFVNKLDRMGADFLRVVKQTKDVLAANPLVMVLPIGIEDEFCGVVDLLTRKAYVWDDSGIPENFEVKDVPANMVDLVEEYREMLIETAVEQDDDLLEAYMEGEEPSIEDLKRCIRKGTRTMAFFPTFCGSAFKNKGMQLVLDAVVDYLPAPDEVDPQPLTDEEGNETGEYAIVSADESLKALAFKIMDDRFG... | ribosome disassembly cytoplasm GTP binding GTPase activity guanosine tetraphosphate binding translation elongation factor activity Shewanella oneidensis Cytoplasm Elongation factor GTP-binding Nucleotide-binding Protein biosynthesis Reference proteome MTELSKYRNI MTELSKYRNIGIFAHVDAGKTTTTERILKLTGKIHKIGEVHDGESTTDFMVQEAERG... |
cellular response to stimulus response to stress | cytoplasm | zinc ion binding | Shewanella oneidensis | Cytoplasm Metal-binding Reference proteome Zinc | MQQQILERIE | MQQQILERIEDCYQQAEAYFKRAFPRPTTQFTLRGRSAGTAHLQQNRLRFNPVLLRENSEAFLAEVVPHEISHLLCFQIFGKTKPHGREWQSIMLKLFKISPNTTHNFDTQSVKGKDVEYRCACGPIRLGIRRHNKVLRGETRYLCKRCHTHLTLA | cellular response to stimulus response to stress cytoplasm zinc ion binding Shewanella oneidensis Cytoplasm Metal-binding Reference proteome Zinc MQQQILERIE MQQQILERIEDCYQQAEAYFKRAFPRPTTQFTLRGRSAGTAHLQQNRLRFNPVLLRENSEAFLAEVVPHEISHLLCFQIFGKTKPHGREWQSIMLKLFKISPNTTHNFDTQSVKGKDVEYRCACGPIRLGIRRHNKVLRGETRYLCKRCHTHLTLA |
nucleobase-containing small molecule interconversion purine nucleoside catabolic process pyrimidine nucleobase metabolic process | cytosol | purine nucleosidase activity uridine nucleosidase activity | Shewanella oneidensis | Glycosidase Hydrolase Reference proteome | MTCPIILDCD | MTCPIILDCDPGHDDAIALILALAHPDLVPLAVTTSAGNQTPDKTLNNALRILTLLNRSDIPVAGGAAKPLARDLIIADNVHGETGLDGPALPNPSFSPQAITAVELMAQQIRKSHQPVTLIPTGPLTNIALLLASHSELHDKIERIVLMGGAAGVGNWTPAAEFNIFVDPEAADIVFKSGIPITMCGLDVTHQAQIMDEDIERIRAIPNPVAKCVAELLDFFMIYHRDPKWGFVGAPLHDPCTIAWLLKPELFDAQDCWVGIETQSELTLGMTVVDRYQLTGKPANATVLFGLNRQGFVDLLVHSLAAYTPTYLNRR | nucleobase-containing small molecule interconversion purine nucleoside catabolic process pyrimidine nucleobase metabolic process cytosol purine nucleosidase activity uridine nucleosidase activity Shewanella oneidensis Glycosidase Hydrolase Reference proteome MTCPIILDCD MTCPIILDCDPGHDDAIALILALAHPDLVPLAVTTSAGNQTPDKTLNNAL... |
glycine decarboxylation via glycine cleavage system | cytosol | aminomethyltransferase activity transaminase activity | Shewanella oneidensis | Aminotransferase Reference proteome Transferase | MANKTVLFNK | MANKTVLFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHAVRQDAGMFDVSHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDLAWIAKQSQGFDVTVTERPELAMIAVQGPNAKAKAAAVFSSEQNAAIEGMKPFFGKQAGSLFIATTGYTGEAGYEIIVPETEAEALWQALLDQGVKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIAWEPTDRDFIGRKALEALRDAGTDKLVGLVMEEKGVLRHDMPVFFTDAAGVEQQGVITSGTFSPT... | glycine decarboxylation via glycine cleavage system cytosol aminomethyltransferase activity transaminase activity Shewanella oneidensis Aminotransferase Reference proteome Transferase MANKTVLFNK MANKTVLFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHAVRQDAGMFDVSHMTVVDVTGTDACAFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDLAWI... |
arginine biosynthetic process protein complex oligomerization | cytoplasm | arginine binding DNA binding DNA-binding transcription factor activity | Shewanella oneidensis | Amino-acid biosynthesis Arginine biosynthesis Cytoplasm DNA-binding Reference proteome Repressor Transcription Transcription regulation | MQTTKNQDDL | MQTTKNQDDLVRIFKAILKEERFGSQSEIVTALQAEGFTNINQSKVSRMLSKFGAVRTRNAKQEMVYCLPAELGVPTAGSPLKNLVLDVDHNQAMIVVRTSPGAAQLIARLLDSIGKPEGILGTIAGDDTIFICPSSIQDIADTLETIKSLFNYAE | arginine biosynthetic process protein complex oligomerization cytoplasm arginine binding DNA binding DNA-binding transcription factor activity Shewanella oneidensis Amino-acid biosynthesis Arginine biosynthesis Cytoplasm DNA-binding Reference proteome Repressor Transcription Transcription regulation MQTTKNQDDL MQTTKNQD... |
regulation of DNA-templated transcription regulation of RNA stability regulation of translation, ncRNA-mediated | cytosol | RNA binding | Shewanella oneidensis | Reference proteome RNA-binding Stress response | MAKGQSLQDP | MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAISTVVPARPFNVAGHQNAQGGYGAQDDMPSGE | regulation of DNA-templated transcription regulation of RNA stability regulation of translation, ncRNA-mediated cytosol RNA binding Shewanella oneidensis Reference proteome RNA-binding Stress response MAKGQSLQDP MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAISTVVPARPFNVAGHQNAQGGYGAQDDMPSGE |
mismatch repair | mismatch repair complex | ATP binding ATP hydrolysis activity ATP-dependent DNA damage sensor activity mismatched DNA binding | Shewanella oneidensis | DNA damage DNA repair Reference proteome | MGIQILPPQL | MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNGSGIPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVSRLTLTSRTAEQSEAWQAYAEGVEMAVKVMPAAHPVGSTIEVVDLFFNTPARRRFLKSDKTEFTHIDEWLKRIALVRGDIHFTLTHNGKTVRNYRPAMNEPQYLQRLTQVAGRPFADEALRVECQHDDLRLSGYLQSPWSTVLTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEVEQPGYVLMLDIDPHQVDVNVHPAKHEVRFHQSRYVHDYIL... | mismatch repair mismatch repair complex ATP binding ATP hydrolysis activity ATP-dependent DNA damage sensor activity mismatched DNA binding Shewanella oneidensis DNA damage DNA repair Reference proteome MGIQILPPQL MGIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNGSGIPKEELALALSRHATSKLHSLDDLEAILSFGFRGEALASISSVS... |
DNA metabolic process | cytoplasm | 3'-5'-RNA exonuclease activity nucleic acid binding | Shewanella oneidensis | Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome | MAADANNLIW | MAADANNLIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDDWNQKHHGESGLIERVRASQVNEAEAVAQTIAFLAQYVPKGVSPMCGNSVGQDRRFLNRYMRELEDYFHYRNLDVSTVKELVKRWSPETMAGFKKQNTHQALQDIQESIAELQYYRSKVFKI | DNA metabolic process cytoplasm 3'-5'-RNA exonuclease activity nucleic acid binding Shewanella oneidensis Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome MAADANNLIW MAADANNLIWIDLEMTGLEPDVDRVIEIATLVTDQELNIIGQGPVIAIHQSDEVLAAMDDWNQKHHGESGLIERVRASQVNEAEAVAQTIAFLAQYVPKGVSPMCGNSVGQDRRFLNRYMRELEDYFHYRNLDVSTVKELVKR... |
methylation response to metal ion | cytoplasm | thiopurine S-methyltransferase activity | Shewanella oneidensis | Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase | MEPGFWHEKW | MEPGFWHEKWQQQQIGFHQQDVNPFLVTYWHQLALPADAKIFVPLCGKSLDMCFLAEQGHQVIGCELNELAVQQFFSDNQLPMQQSAEGEHQHYQTEQISLYQGDIFTLPQSITAEVSGFYDRAALIAWPESMRAQYAKQLAYLLPQGSVGLLVTLDYPQEVLSGPPFAVSPTWVETHLSEDFEIQPLACQDVLADNPRFVKKAVPWLNEAVYLLKRR | methylation response to metal ion cytoplasm thiopurine S-methyltransferase activity Shewanella oneidensis Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase MEPGFWHEKW MEPGFWHEKWQQQQIGFHQQDVNPFLVTYWHQLALPADAKIFVPLCGKSLDMCFLAEQGHQVIGCELNELAVQQFFSDNQLPMQQSAEGEHQHYQTEQISLYQGDIFTLPQSITAEVSGF... |
monoatomic ion transport | plasma membrane | mechanosensitive monoatomic ion channel activity | Shewanella oneidensis | Cell inner membrane Cell membrane Ion channel Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport | MSLIQEFKAF | MSLIQEFKAFASRGNVIDMAVGIIIGAAFGKIVSSFVADIIMPPIGIILGGVNFSDLSVVLLAAQGDAPAVVIAYGKFIQTVIDFTIIAFAIFMGLKAINSLKRKQEEAPPASPAPTKDQELLSEIRDLLKAQQEK | monoatomic ion transport plasma membrane mechanosensitive monoatomic ion channel activity Shewanella oneidensis Cell inner membrane Cell membrane Ion channel Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport MSLIQEFKAF MSLIQEFKAFASRGNVIDMAVGIIIGAAFGKIVSSFVADIIMPPIGIILGGVNFSDLSVVLLAAQ... |
methylation | cytosol | histone methyltransferase activity protein-lysine N-methyltransferase activity | Shewanella oneidensis | Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase | MPWIQLRINT | MPWIQLRINTNSDDAETISDLLMEEGAVSITFEDGKDTPIFEPKLGETPLWRDTVVVALFEADTDLTPTIEMLKTLPFLGEHFSHKIEQIEDKDWVREWMDNYHPIQFGKRLWICPSWREVPDPTAVNVILDPGLAFGTGTHPTTALCLEWLDSLDLSNEEVIDFGCGSGILAVAALKLGAKKVTGIDIDYQAIDASKANAERNDVADQLELYLPEDQPADLKADVLVANILAGPLRELAPLIAERVKTGGKLALSGLLKEQAQEISDFYSQWFDMDEAAHKEDWSRLTGTRK | methylation cytosol histone methyltransferase activity protein-lysine N-methyltransferase activity Shewanella oneidensis Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase MPWIQLRINT MPWIQLRINTNSDDAETISDLLMEEGAVSITFEDGKDTPIFEPKLGETPLWRDTVVVALFEADTDLTPTIEMLKTLPFLGEHFSHKIEQIEDKDWVREWMDNYHP... |
phosphorylation | cytosol | ATP binding guanylate kinase activity | Shewanella oneidensis | ATP-binding Cytoplasm Kinase Nucleotide-binding Reference proteome Transferase | MTARGNLFIV | MTARGNLFIVSAPSGAGKSSLISALLKDKPADMQVSVSHTTRAPRPGEINGQHYHFVNVEEFKALIAQNAFFEWAEVFGNYYGTSRHVIEHTLTQGIDVFLDIDWQGAQQVKAVMPEAIGVFILPPSRDELERRLTGRGQDSKDVIDSRMAQAVSEMSHYKEYDFIIVNDDFDTALADLRAIIRSQRLTGASQIHAQNDMLNDLLAG | phosphorylation cytosol ATP binding guanylate kinase activity Shewanella oneidensis ATP-binding Cytoplasm Kinase Nucleotide-binding Reference proteome Transferase MTARGNLFIV MTARGNLFIVSAPSGAGKSSLISALLKDKPADMQVSVSHTTRAPRPGEINGQHYHFVNVEEFKALIAQNAFFEWAEVFGNYYGTSRHVIEHTLTQGIDVFLDIDWQGAQQVKAVMPEAIGVFILPPSRDELERRLTGRGQDSKDVI... |
DNA-templated transcription | DNA-directed RNA polymerase complex | DNA binding DNA-directed 5'-3' RNA polymerase activity | Shewanella oneidensis | DNA-directed RNA polymerase Nucleotidyltransferase Reference proteome Transcription Transferase | MARVTVEDAV | MARVTVEDAVEQIGNRFDMILVAARRARQIAVQGKDPMVEEMNDKPTVIALREIELGLVNAHTLDADERQTVREREAAEIAAVAAIAEGRSL | DNA-templated transcription DNA-directed RNA polymerase complex DNA binding DNA-directed 5'-3' RNA polymerase activity Shewanella oneidensis DNA-directed RNA polymerase Nucleotidyltransferase Reference proteome Transcription Transferase MARVTVEDAV MARVTVEDAVEQIGNRFDMILVAARRARQIAVQGKDPMVEEMNDKPTVIALREIELGLVNAHTLDADERQTV... |
arginine biosynthetic process via ornithine | cytosol | argininosuccinate lyase activity | Shewanella oneidensis | Amino-acid biosynthesis Arginine biosynthesis Cytoplasm Lyase Reference proteome | MALWGGRFQG | MALWGGRFQGETSALFKLFNDSLPVDYRLFEQDVVGSIAWADAIASVGIITATECSDLKKALNELLVEVKGDPAIILASGAEDIHSFVESALIAKVGDLGKKLHTGRSRNDQVATDLKLWCQSEGAALVARLQTLRSELIALAEREFDAVMPGYTHLQRAQPVTFGHWCLAYVEMIERDFSRLTDALKRANTCPLGSGALAGTAYQMDRHALALALNFASPTLNSLDSVSDRDHVVELCSTASISMMHLSRMAEDLIFFNTGEAGFISLSDEVTSGSSLMPQKKNPDALELIRGKTGRVYGSLVGILTTMKALPLAYNKD... | arginine biosynthetic process via ornithine cytosol argininosuccinate lyase activity Shewanella oneidensis Amino-acid biosynthesis Arginine biosynthesis Cytoplasm Lyase Reference proteome MALWGGRFQG MALWGGRFQGETSALFKLFNDSLPVDYRLFEQDVVGSIAWADAIASVGIITATECSDLKKALNELLVEVKGDPAIILASGAEDIHSFVESALIAKVGDLGKKLHTGRSRNDQVATDLKLWC... |
translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MRHRKSGRQL | MRHRKSGRQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGRPEAAQAVDVEAAE | translation cytosolic large ribosomal subunit structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MRHRKSGRQL MRHRKSGRQLNRNSSHRQAMFRNMASSLVRHEIIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTELGPRYQERPGGYTRILKCGLRAGDKAPMAYIELVGRPEAAQAVDVEAAE |
translation | cytosol; small ribosomal subunit | rRNA binding structural constituent of ribosome tRNA binding | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MARIAGINIP | MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATSIAETAKIKELSEAQIDTLREEVAKYLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPIKK | translation cytosol; small ribosomal subunit rRNA binding structural constituent of ribosome tRNA binding Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MARIAGINIP MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATSIAETAKIKELSEAQIDTLREEVAKYLVEGDLRREISMNIKRLMDLGCYRG... |
translation | cytoplasm; ribonucleoprotein complex; ribosome | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MKVRASVKKI | MKVRASVKKICRNCKIVKRSGVVRVICVEPKHKQRQG | translation cytoplasm; ribonucleoprotein complex; ribosome structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MKVRASVKKI MKVRASVKKICRNCKIVKRSGVVRVICVEPKHKQRQG |
translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MRLNTLSPAA | MRLNTLSPAAGAKHAPKRVGRGMGSGLGKTAGRGHKGQKSRSGGGVRPGFEGGQMPLKIRLPKFGFTSRRAMVTAEVRVLELAKVNGDVIDLNALKDANVITRNIQFAKIVLSGTIERPVTVKGLKVTKGARAAIEAAGGKIEE | translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MRLNTLSPAA MRLNTLSPAAGAKHAPKRVGRGMGSGLGKTAGRGHKGQKSRSGGGVRPGFEGGQMPLKIRLPKFGFTSRRAMVTAEVRVLELAKVNGDVIDLNALKDANVITRNIQFAKIVLS... |
translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MATKTVKVTQ | MATKTVKVTQTKSGIGRLPKHRATLTGLGLRRIGHTVELEDTPSVRGMINKVYYMVKVED | translation cytosolic large ribosomal subunit structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MATKTVKVTQ MATKTVKVTQTKSGIGRLPKHRATLTGLGLRRIGHTVELEDTPSVRGMINKVYYMVKVED |
translation | cytosolic large ribosomal subunit | 5S rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MDKKTSRLRR | MDKKTSRLRRAIRARKKIQELGVNRLVVHRTPRHIYAQVINPEAQVVAAASTVEKAVKEQLKSTGNVDAAKAVGKFVAERAIEKGVTNVAFDRSGFKYHGRVAALADAAREAGLQF | translation cytosolic large ribosomal subunit 5S rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MDKKTSRLRR MDKKTSRLRRAIRARKKIQELGVNRLVVHRTPRHIYAQVINPEAQVVAAASTVEKAVKEQLKSTGNVDAAKAVGKFVAERAIEKGVTNVAFDRSGFKYHGRVAALADAAR... |
cytoplasmic translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSRVAKAPVS | MSRVAKAPVSIPAGVEVTLNEQTLTVKGAKGSLTRVINNAVNVVIENGVIKFLPVEGAVGAWAQAGTTRALVNNMVVGVSQGFERKLKLVGVGYRAKLVGADIDLTLGFSHPLVHKLPAGVTAECPSQTDIVLRGVDKQLIGQVAAEIRGYRPPEPYKGKGVRYDDEEVRRKEAKKK | cytoplasmic translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSRVAKAPVS MSRVAKAPVSIPAGVEVTLNEQTLTVKGAKGSLTRVINNAVNVVIENGVIKFLPVEGAVGAWAQAGTTRALVNNMVVGVSQGFERKLKLVGVGYRAKLVGA... |
translation | cytosolic small ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSMQDPIADM | MSMQDPIADMLTRIRNGQAANKVSVKMPSAKLKVAIAKLLKEEGYIADYAVADEAKPELEITLKYFQGQPVVETIQRVSRPGLRIYKGKNELPKVMGGLGVAIVSTSKGLMTDRAARLAGMGGEVICYVA | translation cytosolic small ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSMQDPIADM MSMQDPIADMLTRIRNGQAANKVSVKMPSAKLKVAIAKLLKEEGYIADYAVADEAKPELEITLKYFQGQPVVETIQRVSRPGLRIYKGKNELPKVMGGLGVAIVSTSKGLMTD... |
translation | cytoplasm; small ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAKTSMKARE | MAKTSMKAREAKRAQLVAKFAEKRAALKVIIASPASSDEDRWDAVLKLQALPRDSSASRQRNRCNQTGRPHGFLRKFGLSRIKLREATMRGEVPGLRKASW | translation cytoplasm; small ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAKTSMKARE MAKTSMKAREAKRAQLVAKFAEKRAALKVIIASPASSDEDRWDAVLKLQALPRDSSASRQRNRCNQTGRPHGFLRKFGLSRIKLREATMRGEVPGLRKASW |
translation | cytosolic large ribosomal subunit | RNA binding rRNA binding structural constituent of ribosome tRNA binding | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MAKLHDKYQE | MAKLHDKYQETVVAELTQKFGYTSVMQVPRIEKITLNMGVGEAVADKKVMEHAVRDMTAIAGQKPVVTVARKSVAGFKIREGYPIGCKVTLRGERMWEFLERLVDIAIPRIRDFRGLSAKAFDGRGNYAMGVREQIIFPEIDYDKIDKIRGMDIVITTSAKTDEEGRALLDAFNFPFKK | translation cytosolic large ribosomal subunit RNA binding rRNA binding structural constituent of ribosome tRNA binding Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MAKLHDKYQE MAKLHDKYQETVVAELTQKFGYTSVMQVPRIEKITLNMGVGEAVADKKVMEHAVRDMTAIAGQKPVVTVARKSVA... |
translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAAKIRRQDE | MAAKIRRQDEVIVLAGKDKGKRAKVAQVLPTGKLIVEGINLVKKHQKPNPQLGVAGGIVEKEAPIQASNVAIFNPVTGKADRVGFRFEDGKKVRFFKSNSELVK | translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAAKIRRQDE MAAKIRRQDEVIVLAGKDKGKRAKVAQVLPTGKLIVEGINLVKKHQKPNPQLGVAGGIVEKEAPIQASNVAIFNPVTGKADRVGFRFEDGKKVRFFKSNSELVK |
translation | cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MIQMQSTLDV | MIQMQSTLDVACNSGARRVQCIKVLGGSHRRYAGIGDIIKVSVKEAIPRAKAKKGDVYNAVVVRTKKGVRRPDGSVIRFDRNAAVLLNNNLQPIGTRIFGPVTRELRNEQFMKIVSLAPEVL | translation cytosolic large ribosomal subunit large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MIQMQSTLDV MIQMQSTLDVACNSGARRVQCIKVLGGSHRRYAGIGDIIKVSVKEAIPRAKAKKGDVYNAVVVRTKKGVRRPDGSVIRFDRNAAVLLNN... |
translation | cytosolic small ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSDKIRTLQG | MSDKIRTLQGRVTSNKMDKTITVAIERQVKHPIYGKYIKRTTKIHAHDEANQCNEGDVVAIRECRPLSKTKSWTLVEVVSKA | translation cytosolic small ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSDKIRTLQG MSDKIRTLQGRVTSNKMDKTITVAIERQVKHPIYGKYIKRTTKIHAHDEANQCNEGDVVAIRECRPLSKTKSWTLVEVVSKA |
translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MKASELREKS | MKASELREKSVEELNAELLGLLREQFNLRMQHATGQLTQTHQLKLVRRNIARVKTIITSKAGA | translation cytosolic large ribosomal subunit structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MKASELREKS MKASELREKSVEELNAELLGLLREQFNLRMQHATGQLTQTHQLKLVRRNIARVKTIITSKAGA |
translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome tRNA binding | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MLQPKRMKFR | MLQPKRMKFRKMFKGRNRGLANGTEVSFGTFGLKAVGRGRLTARQIESARRAMTRHIKRQGQIWIRVFPDKPITSKPLEVRMGKGKGNVEYWVCQIQPGKVLYEMNGVSEVIAREAFALAAAKLPIKTTFVTKTVM | translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome tRNA binding Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MLQPKRMKFR MLQPKRMKFRKMFKGRNRGLANGTEVSFGTFGLKAVGRGRLTARQIESARRAMTRHIKRQGQIWIRVFPDKPITSKPLEVRMGKGKG... |
translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MEVLAKHRFA | MEVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSDR | translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MEVLAKHRFA MEVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHNEGADIDELKVGAVFVDEGPTMKRIMPRAKGRADRIMKRTSHITVVVSDR |
ribosomal small subunit assembly translation | cytosolic small ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MPRSLKKGPF | MPRSLKKGPFIDLHLLKKVEKAMEAGDKKPIKTWSRRSMIIPNMIGLTIAVHNGRQHVPVFVTDEMIGHKLGEFSPTRTYRGHAADKKAKKR | ribosomal small subunit assembly translation cytosolic small ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MPRSLKKGPF MPRSLKKGPFIDLHLLKKVEKAMEAGDKKPIKTWSRRSMIIPNMIGLTIAVHNGRQHVPVFVTDEMIGHKLGEFSPTRTY... |
cytoplasmic translation | cytosolic large ribosomal subunit | RNA binding rRNA binding structural constituent of ribosome transferase activity | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAVIKCKPTS | MAVIKCKPTSPGRRHVVKVVNSDLHKGKPFAGLLAKKSKSGGRNNTGRITVRHVGGGHKQHYRLIDFKRDKDGIPAKIERLEYDPNRTAHIALVLYADGERRYILAAKGMQAGDKIQSGVEAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVARDGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVTPWGVPTKGYKTRSNKRTDKYIVRRRNK | cytoplasmic translation cytosolic large ribosomal subunit RNA binding rRNA binding structural constituent of ribosome transferase activity Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAVIKCKPTS MAVIKCKPTSPGRRHVVKVVNSDLHKGKPFAGLLAKKSKSGGRNNTGRITVRHVGGGHKQHYRLIDFK... |
translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MIREERLLKV | MIREERLLKVILAPHISEKSTVNAEKHNTVVFRVAIDATKAEIKAAVAKLFEVEVESVRTLVSKGKTKRTGGRTGRRSDWKKAYVTLAAGADIDFVGGAE | translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MIREERLLKV MIREERLLKVILAPHISEKSTVNAEKHNTVVFRVAIDATKAEIKAAVAKLFEVEVESVRTLVSKGKTKRTGGRTGRRSDWKKAYVTLAAGADIDFVGGAE |
translation | ribonucleoprotein complex; ribosome | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MELVLKDAQS | MELVLKDAQSALEVSETTFGRDFNEALVHQVVVAYAANARQGTRAQKTRAEVTGSGKKPWRQKGTGRARAGGVKGPIWRGGGVTFAAKTQDHSQKVNKKMYRGALKSILSELVRQDRLVVVESFSVEAPKTKELKAKLKAMNLEDVLIVTSEVDENLFLAARNLYKVDVRDVAGLDPVSLIAFNTVLVTADAVKQIEEMLA | translation ribonucleoprotein complex; ribosome rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MELVLKDAQS MELVLKDAQSALEVSETTFGRDFNEALVHQVVVAYAANARQGTRAQKTRAEVTGSGKKPWRQKGTGRARAGGVKGPIWRGGGVTFAAKTQDHSQKVNKKMYRGALKSILSE... |
translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Shewanella oneidensis | Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAIGLIGRKV | MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANRITKPEAGHFAKSGVEAGRGLWELRLADGEGEGIEVGAELNVGIFADVAKVDVTGQSKGKGFQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDVVRVDVERNLLLVKGAVPGATNGDLIIKPAVKA | translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAIGLIGRKV MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANRITKPEAGHFAKSGVEAGRGLWELRLADGEGEGIEVGAELNV... |
translation | small ribosomal subunit | structural constituent of ribosome tRNA binding | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MQNQRIRIRL | MQNQRIRIRLKGFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKERYTVLISPHVNKDARDQYELRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG | translation small ribosomal subunit structural constituent of ribosome tRNA binding Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MQNQRIRIRL MQNQRIRIRLKGFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKERYTVLISPHVNKDARDQYELRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG |
ribosome disassembly | cytosol | GTP binding GTPase activity guanosine tetraphosphate binding translation elongation factor activity | Shewanella oneidensis | Cytoplasm Elongation factor GTP-binding Nucleotide-binding Protein biosynthesis Reference proteome | MARTTPIERY | MARTTPIERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQERGITITSAAVTTFWRGMDAQFTEHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCGASGVEPQSETVWRQADKYRVPRIVFVNKMDRAGADFERVVKQIRTRLGATCVPIQLNIGAEENFTGVIDLIKMKAINWNEADQGMTFSYEAIPAHLTAKAEEMHEFLVEAAAEASDELMDKYLEEGTLSEEEIKKALRQRTINNEIVLATCGSAFKNKGVQAVLDAVVEFLPAPVDVPPIKGIDDNEQEVERPSDDNAPFAALAF... | ribosome disassembly cytosol GTP binding GTPase activity guanosine tetraphosphate binding translation elongation factor activity Shewanella oneidensis Cytoplasm Elongation factor GTP-binding Nucleotide-binding Protein biosynthesis Reference proteome MARTTPIERY MARTTPIERYRNIGICAHVDAGKTTTTERVLFYTGLSHKIGEVHDGAATTDWMVQEQER... |
ribosomal small subunit assembly translation | cytosolic small ribosomal subunit; ribosome | mRNA binding rRNA binding structural constituent of ribosome tRNA binding | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MPRRRVVGQR | MPRRRVVGQRKILPDPKFHSELLAKFINVIMQDGKKSTAEKIIYKALDVIAEKKGANHLDILEAALDNVRPSVEVKSRRVGGSTYQVPCEVRPVRRNALAMRWLVEAARKRGEKSMALRLAGEMLDASENKGTAVKKREDVHRMAEANKAFAHYRW | ribosomal small subunit assembly translation cytosolic small ribosomal subunit; ribosome mRNA binding rRNA binding structural constituent of ribosome tRNA binding Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MPRRRVVGQR MPRRRVVGQRKILPDPKFHSELLAKFINVIM... |
translation | cytosolic large ribosomal subunit | mRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein | MSITKDQILE | MSITKDQILEAFAAMSVMEVVELIEAMEEKFGVSAAAAVVSGGGEAAAAVEEQTEFNVILTAHGDNKVAVIKAIRGATGLGLKEAKAMSEAAPVAVKEGVSKEEAEALKKELVEAGASVEIK | translation cytosolic large ribosomal subunit mRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein MSITKDQILE MSITKDQILEAFAAMSVMEVVELIEAMEEKFGVSAAAAVVSGGGEAAAAVEEQTEFNVILTAHGDNKVAVIKAIRGATGLGLKEAKAMSEAAPVAVKEGVSKEEAEALKKELVEAGASVEIK |
translation | cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding structural constituent of ribosome | Shewanella oneidensis | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MALRLEDKKA | MALRLEDKKAIVAEVNEAAKGALSAVAADSRGVTVGAMTGLRKKAREAGVYVRVVRNTLARRAVEGTAFECLAETFTGPTLIAFSNEHPGAAARLLKDFAKEQANFEVKGAAFEGNFIPAADIDRLAKLPTYEEALAQLMMTMKEASAGKFVRTLAALRDQKQEAA | translation cytosolic large ribosomal subunit large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MALRLEDKKA MALRLEDKKAIVAEVNEAAKGALSAVAADSRGVTVGAMTGLRKKAREAGVYVRVVRNTLARRAVEGTAFECLAETFTGPTLIAFSNEHP... |
regulation of translation translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome tRNA binding | Shewanella oneidensis | Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation tRNA-binding | MAKLTKRMRV | MAKLTKRMRVIREKVDGTKLYEINDAVALLKELATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRDVRVAVFTQGANAEAAKAAGAELVGMDDLAEKIKAGEMNFDVVIASPDAMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFTPVQLKENLEALISALKKAKPAVAKGVYVKKVSISTTMGAGVAVDQASLETAN | regulation of translation translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome tRNA binding Shewanella oneidensis Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation tRNA-binding MAKLTKRMRV MAKLTKRMRVIREKVDGTKLYEINDAVA... |
translation | cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding structural constituent of ribosome | Shewanella oneidensis | Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAKKIDAYIK | MAKKIDAYIKLQVKSGSANPSPPVGPALGQKGVNIMEFCKAFNARTEKMEKGMPIPVVITVYSDRSFTFETKTPPASYLLKTAAGLKSGSPRPNTQKVGTIARAKIQEIAEMKAADMTGADVEAMTRSIEGTARSMGLVVEG | translation cytosolic large ribosomal subunit large ribosomal subunit rRNA binding structural constituent of ribosome Shewanella oneidensis Methylation Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAKKIDAYIK MAKKIDAYIKLQVKSGSANPSPPVGPALGQKGVNIMEFCKAFNARTEKMEKGMPIPVVITVYSDRSFTFETKTPPAS... |
protein refolding | cytoplasm | protein folding chaperone unfolded protein binding | Shewanella oneidensis | Chaperone Cytoplasm Disulfide bond Redox-active center Reference proteome Zinc | MTQDILHRYL | MTQDILHRYLFDNADVRGELVQLQNSYQQVIGSHAYPPVLQTLLGELLAATSLLTATLKFSGDISVQLQGNGPVSLAVINGNNLQQLRGIARWDGELADDASLADLFGQGYMVITLTPDEGERYQGVVALDKPTLAACVEDYFNQSEQLPTALWLFADGKQAAGMFLQILPSQEDHNADFEHLCQLTATIKAEELFTLEAQEVLHRLYHQEEVRLFDPIEVSFKCTCSRERSAAAIKTIDQAEVEAILAEDGNVEMGCEYCNAKYLFDAIDIASIYANGTASNTQQ | protein refolding cytoplasm protein folding chaperone unfolded protein binding Shewanella oneidensis Chaperone Cytoplasm Disulfide bond Redox-active center Reference proteome Zinc MTQDILHRYL MTQDILHRYLFDNADVRGELVQLQNSYQQVIGSHAYPPVLQTLLGELLAATSLLTATLKFSGDISVQLQGNGPVSLAVINGNNLQQLRGIARWDGELADDASLADLFGQGYMVITLTPDEGERYQGVVA... |
rRNA base methylation | cytoplasm | 23S rRNA (adenine(1618)-N(6))-methyltransferase activity | Shewanella oneidensis | Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase | MPKPAIKTAA | MPKPAIKTAAKPATSPAGKRAKPNTPQSVAKLKASTAKAASKPKAKLGEKKTLHPRNVHLHGYDFVALMASFPKLKAFVRPTAYGALSIDFADPLAVKNLNAALLKQHYQIDFWDIPKGALCPPIPGRVDYVHYLADLLFEGATAPRVEQVCALDIGTGANGIYAILGQQVYGWQFVASDINPQSLANVQRIIDNNSCLQGHVTLRRQRDENAIFKGIIEAADRFELTLCNPPFHASLREASEGSQRKVRNLQLSRGEKPKATGASLNFGGQAAELWCQGGEKQFLATMIRESHMFAEQCLWFTSLVSKQENLKPCYQAL... | rRNA base methylation cytoplasm 23S rRNA (adenine(1618)-N(6))-methyltransferase activity Shewanella oneidensis Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase MPKPAIKTAA MPKPAIKTAAKPATSPAGKRAKPNTPQSVAKLKASTAKAASKPKAKLGEKKTLHPRNVHLHGYDFVALMASFPKLKAFVRPTAYGALSIDFADPLAVKN... |
Mo-molybdopterin cofactor biosynthetic process | cytoplasm | sulfur carrier activity sulfurtransferase activity | Shewanella oneidensis | Cytoplasm Molybdenum cofactor biosynthesis Reference proteome | MEYHSHTVVT | MEYHSHTVVTERKVTLLEQGQASDLTDYVANEVRVALVYNGISHTVMLASPENLEEFAIGFTLSERIVSHVNEIKGVDLEFTPEGVLIQVEITQRCFMALKQLRRNMAGRTGCGLCGVAQLEEAVKPVIRVDSDARFNIDHLQFALEQVKDNQHHFKLTGATHAAMGLDLEGQIIAAYEDIGRHIALDKLIGGCSMRHAKRPVAVLLTSRASFEMVQKAASANIQILFAMSAVTSLALELAEKSNITLIGFCRNGRATLYTHGYRLLGLNRASLAKAI | Mo-molybdopterin cofactor biosynthetic process cytoplasm sulfur carrier activity sulfurtransferase activity Shewanella oneidensis Cytoplasm Molybdenum cofactor biosynthesis Reference proteome MEYHSHTVVT MEYHSHTVVTERKVTLLEQGQASDLTDYVANEVRVALVYNGISHTVMLASPENLEEFAIGFTLSERIVSHVNEIKGVDLEFTPEGVLIQVEITQRCFMALKQLRRNMAGRTGCGLCG... |
protein folding protein tetramerization protein transport | cytoplasm | unfolded protein binding | Shewanella oneidensis | Chaperone Cytoplasm Protein transport Reference proteome Translocation Transport | MAEVANNEQQ | MAEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVLSLTVTAQNGGETAFLCEVQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSLVGRGTFPQLNLAPVNFDALFAQYVQQRQAAAAEEANA | protein folding protein tetramerization protein transport cytoplasm unfolded protein binding Shewanella oneidensis Chaperone Cytoplasm Protein transport Reference proteome Translocation Transport MAEVANNEQQ MAEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVLSLTVTAQNGGETAFLCEVQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYA... |
conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | cytosol | methionyl-tRNA formyltransferase activity | Shewanella oneidensis | Protein biosynthesis Reference proteome Transferase | MKPLNIIFAG | MKPLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVYQPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSASLYEKLALQGPDALLQALEGLANGTLAAEKQDETLANYAEKLSKEEARLDWTKSATQLWQEVRAFNPWPVSYFEHQGNTIKVWQTQVSTTSSTAAPGTIINASKKGIDVSTGDGVLTLLSMQLPGKKPLSVADILNARGEWFTPNTRLNNEAQ | conversion of methionyl-tRNA to N-formyl-methionyl-tRNA cytosol methionyl-tRNA formyltransferase activity Shewanella oneidensis Protein biosynthesis Reference proteome Transferase MKPLNIIFAG MKPLNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELALSHSIPVYQPGSLRKEPAQQELASLNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAPIQRALWA... |
tRNA wobble position uridine thiolation | cytoplasm | sulfur carrier activity | Shewanella oneidensis | Cytoplasm Reference proteome | MNDVFSTAQH | MNDVFSTAQHKLDALGLRCPEPVMMVRKTVRQMAQGETLLIIADDPATTRDIPSFCEFMDHTLIASETMQTPYQYLIKKGL | tRNA wobble position uridine thiolation cytoplasm sulfur carrier activity Shewanella oneidensis Cytoplasm Reference proteome MNDVFSTAQH MNDVFSTAQHKLDALGLRCPEPVMMVRKTVRQMAQGETLLIIADDPATTRDIPSFCEFMDHTLIASETMQTPYQYLIKKGL |
glycyl-tRNA aminoacylation | cytoplasm | ATP binding glycine-tRNA ligase activity | Shewanella oneidensis | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MTTKHDVKTF | MTTKHDVKTFQGFILTLQEYWAQQGCAIVQPLDMEVGAGTFHPQTFLRSLGPEPMSSAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPSPDNIQELYLGSLQALGIDTQIHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECSPVTGEITYGLERLAMYIQGVDSVYDLVWTDGPMGRITYGDVFHQNEVEQSTYNFEHADVDFMFALFDQCEKMCQHLLSLEKPLPLPAYEQVMKASHAFNLLDARHAISVTERQRYILRVRTMAKAVAESYYQAREALGFPMCK | glycyl-tRNA aminoacylation cytoplasm ATP binding glycine-tRNA ligase activity Shewanella oneidensis Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MTTKHDVKTF MTTKHDVKTFQGFILTLQEYWAQQGCAIVQPLDMEVGAGTFHPQTFLRSLGPEPMSSAYVQPSRRPTDGRYGENPNRLQHYYQFQVVLKPSPDNI... |
arginyl-tRNA aminoacylation glycyl-tRNA aminoacylation | cytosol | arginine-tRNA ligase activity ATP binding glycine-tRNA ligase activity | Shewanella oneidensis | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MNFENLLIEL | MNFENLLIELGTEELPPKALRKLAESFLANFTEELTKADLAFKSAVWYAAPRRLALNITELAIAQADKIVEKRGPAVSSAFDAGGKPTKAAEGWARGNGITVDQAERLVTDKGEWLVYNAKVEGVETKSLVAAMAQRALDKLPIPKPMRWGSSKTQFIRPVHTATMLLGSELIEGELLGIKSARNIRGHRFMGTGFELDHADNYLTLLKEKGKVIADYESRKALIKADAEKAAAKIGGTADIEDALLEEVTSLVEWPVVLTASFEEKFLSVPSEALVYTMKGDQKYFPVFDDAGKLLPNFIFVANIESKDPAQIISGNEK... | arginyl-tRNA aminoacylation glycyl-tRNA aminoacylation cytosol arginine-tRNA ligase activity ATP binding glycine-tRNA ligase activity Shewanella oneidensis Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MNFENLLIEL MNFENLLIELGTEELPPKALRKLAESFLANFTEELTKAD... |
DNA replication DNA synthesis involved in DNA repair double-strand break repair SOS response | cytoplasm | ATP binding single-stranded DNA binding | Shewanella oneidensis | ATP-binding Cytoplasm DNA damage DNA repair DNA replication DNA-binding Nucleotide-binding Reference proteome SOS response | MSLIRLNIDS | MSLIRLNIDSFRNIQLAQLSPSEGINLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRVINNDQDKLTLFATLNLPRGDSKIGLRRFRSGETEVKIDGEKVKRLSTLAETLPIQVITPESFSLLFEGPKSRRQFIDWGAFHTDPQFYAAWMNVRRVLKQRNQMLRNGSPYDQIQYWDREFIRYTEQVTEIRNRYVDSLNELLKGIIGEFLPQVDVKVSFTRGWDSKTDFAQLLESQYPRDLATGHTVSGPHKADLRLRVGTLPAQDALSRGQLKLLVCALRIAQGKLLKQQIDKHSIYLVDDLPSELDAQHRQLLLKQL... | DNA replication DNA synthesis involved in DNA repair double-strand break repair SOS response cytoplasm ATP binding single-stranded DNA binding Shewanella oneidensis ATP-binding Cytoplasm DNA damage DNA repair DNA replication DNA-binding Nucleotide-binding Reference proteome SOS response MSLIRLNIDS MSLIRLNIDSFRNIQLAQLSP... |
DNA replication DNA replication initiation regulation of DNA replication | cytoplasm; plasma membrane | ATP binding ATP hydrolysis activity DNA replication origin binding | Shewanella oneidensis | ATP-binding Cytoplasm DNA replication DNA-binding Nucleotide-binding Reference proteome | MAVSLWQQCI | MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGDTLVLYAPNRFVLDWVRDKYINIINQFFTEQMGNDAPKLRFDIGSRPSAKKPEPAPVAAVRVPSPQTKASVGTAFNTTEPVANTNHRSNINPTYQFDNFVEGKSNQLGKAAALQVAENPGGAYNPLFLYGGTGLGKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQIILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILMRKAQESGINLPDEVAFFIAK... | DNA replication DNA replication initiation regulation of DNA replication cytoplasm; plasma membrane ATP binding ATP hydrolysis activity DNA replication origin binding Shewanella oneidensis ATP-binding Cytoplasm DNA replication DNA-binding Nucleotide-binding Reference proteome MAVSLWQQCI MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAE... |
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