Biological Process stringlengths 7 1.01k | Cellular Component stringlengths 6 867 | Molecular Function stringlengths 11 871 | Organism stringlengths 8 73 | Keywords stringlengths 1 810 | Sequence 10 stringlengths 5 10 | Sequence stringlengths 5 1.02k | Combined stringlengths 136 3.91k |
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proton transmembrane transport | membrane; plasma membrane | antiporter activity glutathione-regulated potassium exporter activity | Salmonella typhimurium | Antiport Cell inner membrane Cell membrane Ion transport Membrane Potassium Potassium transport Reference proteome Transmembrane Transmembrane helix Transport | MEGADLLTAG | MEGADLLTAGVLFLFAAVAAVPLAARLGIGAVLGYLLAGIAIGPWGLGFISDVDEILHFSELGVVFLMFIIGLELNPSRLWQLRRSIFGVGAAQVLLSAAVLAGLLMLADFLWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAVIPALALVPLLAGSADEHFDWFKVAMKVLAFAVMLIGGRYLLRPVFRFIAASGVREVFTAATLLLVLSAALFMDALGLSMALGTFIAGVLLAESEYRHELENAIDPFKGLLLGLFFISVGMSLNLGVLYTHLLWVAASVVILVVIKMLTLYLLARLYGIRS... | proton transmembrane transport membrane; plasma membrane antiporter activity glutathione-regulated potassium exporter activity Salmonella typhimurium Antiport Cell inner membrane Cell membrane Ion transport Membrane Potassium Potassium transport Reference proteome Transmembrane Transmembrane helix Transport MEGADLLTAG ... |
tRNA wobble position uridine thiolation | cytosol; sulfurtransferase complex | sulfur carrier activity sulfurtransferase activity | Salmonella typhimurium | Cytoplasm Reference proteome Transferase tRNA processing | MRYAIMVTGP | MRYAIMVTGPAYGTQQASSALQFAHALLNEGHELASVFFYREGVYNANLLTSPASDEYDLVRAWQKLNTQHGVALNICVAAALRRGIIDETEAGRLALPSANLQPGFTLSGLGALAEASLTCDRVVQF | tRNA wobble position uridine thiolation cytosol; sulfurtransferase complex sulfur carrier activity sulfurtransferase activity Salmonella typhimurium Cytoplasm Reference proteome Transferase tRNA processing MRYAIMVTGP MRYAIMVTGPAYGTQQASSALQFAHALLNEGHELASVFFYREGVYNANLLTSPASDEYDLVRAWQKLNTQHGVALNICVAAALRRGIIDETEAGRLALPSANL... |
translation | cytosol; small ribosomal subunit | rRNA binding structural constituent of ribosome tRNA binding | Salmonella typhimurium | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MARIAGINIP | MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRTKTNARTRKGPRKPIKK | translation cytosol; small ribosomal subunit rRNA binding structural constituent of ribosome tRNA binding Salmonella typhimurium Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MARIAGINIP MARIAGINIPDQKHAVIALTSIYGVGKTRSKAILAAAGIAENVKISELSEEQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYR... |
carboxylic acid transport | plasma membrane | transmembrane transporter activity | Salmonella typhimurium | Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport | MGIFSIANQH | MGIFSIANQHIRFAVKLACAIVLALFIGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGMLRIIGTFIGCIAALIIIISMIRAPLLMILVCCVWAGFCTWISSLVRIENSYAWGLSGYTALIIVITIQTEPLLTPQFALERCSEIVIGIGCAILADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKHGDSEEVDNAWGDLVRRTAALEGMRSNLNMESSRWVRANRRLKALNTLSLTLITQSCETYLIQNTRPELITDTFRELFETPVETVQDVHRQLKRMRRVIVWTGERETPVTLYSWVGAATRYLLL... | carboxylic acid transport plasma membrane transmembrane transporter activity Salmonella typhimurium Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport MGIFSIANQH MGIFSIANQHIRFAVKLACAIVLALFIGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGMLRIIGTFIGCIAALIIIISMIRAPLLMILVCCVWA... |
maturation of SSU-rRNA ribosome biogenesis | cytosol | ribosomal small subunit binding | Salmonella typhimurium | Cytoplasm Reference proteome Ribosome biogenesis | MAKEFGRPQR | MAKEFGRPQRVAQEMQKEIAIILQREIKDPRLGMMTTVSGVEMSRDLAYAKVFVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED | maturation of SSU-rRNA ribosome biogenesis cytosol ribosomal small subunit binding Salmonella typhimurium Cytoplasm Reference proteome Ribosome biogenesis MAKEFGRPQR MAKEFGRPQRVAQEMQKEIAIILQREIKDPRLGMMTTVSGVEMSRDLAYAKVFVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTNVVKHDEERRVNPDDSKED |
serine transport threonine transport | plasma membrane | neutral L-amino acid:sodium symporter activity | Salmonella typhimurium | Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Symport Transmembrane Transmembrane helix Transport | MATQRASGLL | MATQRASGLLQRLAQGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPVLVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAQDIVPPSGIVEVLRGLLMSMVSNPIDALLNANYIGILVWAVGLGFALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPVGIFGLVSSTLATTGFSTLWGYAHLLVVLIGCMLLVALVVNPLLVFWKIRRNPYPLVFACLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVHTLGV... | serine transport threonine transport plasma membrane neutral L-amino acid:sodium symporter activity Salmonella typhimurium Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Symport Transmembrane Transmembrane helix Transport MATQRASGLL MATQRASGLLQRLAQGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFV... |
cellular response to oxidative stress DNA damage response | cytoplasm | anti-sigma factor antagonist activity | Salmonella typhimurium | Cytoplasm Reference proteome Stress response | MMTPTIPVAL | MMTPTIPVALFDRLLVEGISPHELVRRKLMCLFNSCAVPGGETLPPLLTRGMPEWHEVNVGDKRVLNWFCRELRAAILRYEPSINMLKVSVKDAHHQTLALSLEAMLQDESEPLRLEIAYSNGRWR | cellular response to oxidative stress DNA damage response cytoplasm anti-sigma factor antagonist activity Salmonella typhimurium Cytoplasm Reference proteome Stress response MMTPTIPVAL MMTPTIPVALFDRLLVEGISPHELVRRKLMCLFNSCAVPGGETLPPLLTRGMPEWHEVNVGDKRVLNWFCRELRAAILRYEPSINMLKVSVKDAHHQTLALSLEAMLQDESEPLRLEIAYSNGRWR |
rRNA 5'-end processing | cytoplasm | nuclease activity | Salmonella typhimurium | Cytoplasm Hydrolase Nuclease Reference proteome Ribosome biogenesis | MSGTLLAFDF | MSGTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVTVTLHDERLSTVEARSGLFERGGYRALNKGKVDSASAVIILESYFEQGY | rRNA 5'-end processing cytoplasm nuclease activity Salmonella typhimurium Cytoplasm Hydrolase Nuclease Reference proteome Ribosome biogenesis MSGTLLAFDF MSGTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVTVTLHDERLSTVEARSGLFERGGYRALNKGKVDSASAVIILESYFEQGY |
amino acid transport | plasma membrane | amino acid transmembrane transporter activity L-arginine transmembrane transporter activity | Salmonella typhimurium | Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport | MISYYFQGFA | MISYYFQGFALGAAMILPLGPQNAFVMNQGIRRQYHLMIALLCALSDLVLISAGIFGGSALLMQSPWLLALVTWGGVAFLLWYGFGALKTAMSSNLELASAEVMKQGRWKIIATMLAVTWLNPHVYLDTFVVLGSLGGQLAMEPKRWFALGTISASFLWFFGLALLAAWLAPRLRTAKAQRIINILVGVVMWLIAFQLAREGVAHMHALFN | amino acid transport plasma membrane amino acid transmembrane transporter activity L-arginine transmembrane transporter activity Salmonella typhimurium Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport MISYYFQGFA MISYYFQGFALGAAMILPLGPQNAFVMNQG... |
iron-sulfur cluster assembly RNA modification tRNA processing | cytoplasm | folic acid binding | Salmonella typhimurium | Cytoplasm Folate-binding Reference proteome tRNA processing | MAFISFPPRH | MAFISFPPRHPSSSARLPLTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRERDGFAWIERRSVLEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSELPNSENQVVRDGASTLLWFEHPAERFLLVTDVATANMLTEKLHGEAELNNSQQWLALDIEAGIPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGKASRVPEAGEDLELQMGENWRRTGAILAATQLDDGQLLVQAVMNNDLEAESVFRVRDDANTLHIVPL... | iron-sulfur cluster assembly RNA modification tRNA processing cytoplasm folic acid binding Salmonella typhimurium Cytoplasm Folate-binding Reference proteome tRNA processing MAFISFPPRH MAFISFPPRHPSSSARLPLTLIALDDWALSTITGVDSEKYIQGQVTADVSQMTEQQHLLAAHCDAKGKMWSTLRLFRERDGFAWIERRSVLEAQLTELKKYAVFSKVVIAPDDERVLLGVAGFQARAALANVFSE... |
cobalt ion transport response to cobalt ion response to nickel cation | plasma membrane | monoatomic cation efflux transmembrane transporter activity nickel cation transmembrane transporter activity | Salmonella typhimurium | Cell inner membrane Cell membrane Cobalt Cobalt transport Ion transport Membrane Nickel Nickel transport Reference proteome Transmembrane Transmembrane helix Transport | MGEFSTLLQQ | MGEFSTLLQQGNGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLAATLSHTAIVWLIALGGMYLSRAFTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWLAGNHHHDHDHDHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDAHERAHAADIQRRFDGQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLALTLVTVGVGAAISVQQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGIMQ | cobalt ion transport response to cobalt ion response to nickel cation plasma membrane monoatomic cation efflux transmembrane transporter activity nickel cation transmembrane transporter activity Salmonella typhimurium Cell inner membrane Cell membrane Cobalt Cobalt transport Ion transport Membrane Nickel Nickel transpo... |
DNA modification mismatch repair | cytoplasm | DNA binding endonuclease activity | Salmonella typhimurium | Cytoplasm DNA damage DNA repair Endonuclease Hydrolase Nuclease Reference proteome | MSALCPLLTP | MSALCPLLTPPASEALLLAQARQLSGYTLGELAAMAGITTPKDLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWVPVEGDRSIPLAERRVGSPLLWSPSEEEDRQLRLDWEELMDMIVLGQVERITARHGEVLQLRPKAANARALTEAIGARGEPILTLPRGFYLKKNFTQALLARHFLLQNP | DNA modification mismatch repair cytoplasm DNA binding endonuclease activity Salmonella typhimurium Cytoplasm DNA damage DNA repair Endonuclease Hydrolase Nuclease Reference proteome MSALCPLLTP MSALCPLLTPPASEALLLAQARQLSGYTLGELAAMAGITTPKDLKRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTGNSGVTWETSHVRHKLKRVLWVPVE... |
arginine biosynthetic process | cytoplasm | acetyl-CoA:L-glutamate N-acetyltransferase activity methione N-acyltransferase activity | Salmonella typhimurium | Acyltransferase Amino-acid biosynthesis Arginine biosynthesis Cytoplasm Reference proteome Transferase | MIKERKTELV | MIKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHDNFSSIVSDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPIYHKNTRVTDAKALELVKQAAGLLQLDITARLSMSLNNTPLQGAHINVVSGNFTIAQPLGVDDGVDYCHSGRIRRIDEDAINRQLDNGAIVLMGPVAVSVTGESFNLTSEEIATQLAVKLKAEKMIGFCSSQGVTNSEGGIISELFPNEAQARVEELEAQGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGSLLQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQG... | arginine biosynthetic process cytoplasm acetyl-CoA:L-glutamate N-acetyltransferase activity methione N-acyltransferase activity Salmonella typhimurium Acyltransferase Amino-acid biosynthesis Arginine biosynthesis Cytoplasm Reference proteome Transferase MIKERKTELV MIKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHDNFSSIVSDIGLLHSL... |
amino acid transport response to stimulus | ATP-binding cassette (ABC) transporter complex; periplasmic space | transmembrane transporter activity | Salmonella typhimurium | Amino-acid transport Disulfide bond Periplasm Reference proteome Signal Transport | MRHTVIFASA | MRHTVIFASAFATLVTASAFAADLPGKGITVQPIQSTISEETFQTLLVSRALEKLGYTVNKPSEVDYNVGYTSIASGDATFTAVNWQPLHDDMYAAAGGDNKFYREGVFVSGAAQGYLIDKKTAEQYNITNIAQLKDPKIAKIFDTNGDGKADMMGCSPGWGCEAVINHQNKAFDLQKTVEVSHGNYAAMMADTITRFKEGKPVLYYTWTPYWVSDVMKPGKDVVWLQVPFSSLPGEQKNIDTKLPNGANYGFPVNTMHIVANKAWAEKNPAAAKLFAIMKLPLADINAQNAMMHAGKSSEADVQGHVDGWINAHQQQFD... | amino acid transport response to stimulus ATP-binding cassette (ABC) transporter complex; periplasmic space transmembrane transporter activity Salmonella typhimurium Amino-acid transport Disulfide bond Periplasm Reference proteome Signal Transport MRHTVIFASA MRHTVIFASAFATLVTASAFAADLPGKGITVQPIQSTISEETFQTLLVSRALEKLGYTVNK... |
amino acid export across plasma membrane | plasma membrane | L-amino acid efflux transmembrane transporter activity | Salmonella typhimurium | Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport | MFSPQSRLRH | MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSFEQSLSSRLVAIPVNILIAWPYGVYRDLIMRVARKASPAGWAKNLADVLAYVTFQSPVYIIILLTVGAGWHQIVAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSSYHQAKA | amino acid export across plasma membrane plasma membrane L-amino acid efflux transmembrane transporter activity Salmonella typhimurium Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport MFSPQSRLRH MFSPQSRLRHAVADTFAMVVYCSVVNMLIEIFLSGMSFEQSLSSRLV... |
cysteine export across plasma membrane | plasma membrane | amino acid transmembrane transporter activity | Salmonella typhimurium | Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport | MTPMLLSAFW | MTPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLAGMSLGFLVVMLLCAGIAFSLAVIDPAIIHLLSWVGAAYILWLAWKIATSPAADENARPKPVGFWVSFGLQFVNVKIILYGITALSTFVLPQTQALNWVIGVSILLALIGTFGNVCWALAGHLFQRAFRHYGRQLNIILALLLVYCAVRIFY | cysteine export across plasma membrane plasma membrane amino acid transmembrane transporter activity Salmonella typhimurium Amino-acid transport Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport MTPMLLSAFW MTPMLLSAFWTYTLITALTPGPNNILALSAATAHGFRQSIRVLAGMSLGFLVVMLLCA... |
methylation tRNA processing | cytoplasm | nucleic acid binding tRNA (adenine-N6)-methyltransferase activity | Salmonella typhimurium | Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase tRNA processing | MSQSGSVLRR | MSQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAMQAQENVAHSPWPHRITVHTDDIQRWAPRQTVRFDLIISNPPYYEPGVECATPQREQARYTATLDHQTLLAIAADCITEDGFFCVVLPEQIGNAFTQQALNMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGSDQHYSESYTALTQAFYLFM | methylation tRNA processing cytoplasm nucleic acid binding tRNA (adenine-N6)-methyltransferase activity Salmonella typhimurium Cytoplasm Methyltransferase Reference proteome S-adenosyl-L-methionine Transferase tRNA processing MSQSGSVLRR MSQSGSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVADVKRILDIGTGSGLLALMLAQRTDDNVPIDAVELDAGAAM... |
cluster assembly protein complex oligomerization protein folding protein maturation by iron-sulfur cluster transfer | iron-sulfur cluster transfer complex | ATPase activator activity protein-folding chaperone binding | Salmonella typhimurium | Chaperone Reference proteome | MDYFTLFGLP | MDYFTLFGLPARYQIDTQALSLRFQDLQRQYHPDKFANGTQAQQLAAVQQSATINQAWQTLRHPLTRAEYLLSLHGFDLASEQHTVRDTAFLMEQLTLREELDDIEQSKDDARLESFIKRVQKMFDARLQQMVEQLDNAAWDAAADTVRKLRFLDKLRSSAEQLEEKLLDF | cluster assembly protein complex oligomerization protein folding protein maturation by iron-sulfur cluster transfer iron-sulfur cluster transfer complex ATPase activator activity protein-folding chaperone binding Salmonella typhimurium Chaperone Reference proteome MDYFTLFGLP MDYFTLFGLPARYQIDTQALSLRFQDLQRQYHPDKFANGTQAQ... |
chaperone cofactor-dependent protein refolding iron-sulfur cluster assembly protein refolding | cytosol | ATP binding ATP hydrolysis activity ATP-dependent protein folding chaperone heat shock protein binding protein folding chaperone unfolded protein binding | Salmonella typhimurium | ATP-binding Chaperone Nucleotide-binding Reference proteome | MALLQISEPG | MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETLPDHEGRHLLPSVVHYQQQGHTVGYAARDNAAQDTANTISSVKRMMGRSLADIQTRYPHLPYRFKASVNGLPMIDTAAGLLNPVRVSADILKALAARASESLSGELDGVVITVPAYFDDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGKEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLLADYIREQAGIADRSDNRVQRELLDAAIAAKIALSDADTVRVNVAGWQGEITREQFNDLISALVKRTLLACRRALK... | chaperone cofactor-dependent protein refolding iron-sulfur cluster assembly protein refolding cytosol ATP binding ATP hydrolysis activity ATP-dependent protein folding chaperone heat shock protein binding protein folding chaperone unfolded protein binding Salmonella typhimurium ATP-binding Chaperone Nucleotide-binding ... |
DNA catabolic process | cytoplasm; exodeoxyribonuclease VII complex | exodeoxyribonuclease VII activity nucleic acid binding | Salmonella typhimurium | Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome | MLSSQTSSIF | MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANARGECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALE... | DNA catabolic process cytoplasm; exodeoxyribonuclease VII complex exodeoxyribonuclease VII activity nucleic acid binding Salmonella typhimurium Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome MLSSQTSSIF MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAESMQPA... |
proteolysis | plasma membrane | serine-type D-Ala-D-Ala carboxypeptidase activity | Salmonella typhimurium | Carboxypeptidase Cell inner membrane Cell membrane Hydrolase Membrane Protease Reference proteome Transmembrane Transmembrane helix | MKFTLVATVL | MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDGWIQNQIDAGYPSINLLVIKDNHIVLQKAWGYAKKYDGSTLLAHPIRATTNTMYDLASNTKMYATNFALQKLVYEGKIDVNDLVSKYIPGFKDMPGDKIKGKNKLRIIDILHHVAGFPADPQYPNKNVAGKLFSQSKSTTLEMIKKTPLEYQPGSKHIYSDVDYMILGFIIESITAMPLDRYVETTIYKPLGLKHTVFNPLMKGFTPPQIAATELHGNTRDGVIHFPNIRTNTLWGQVHDEKAWYSMGGVSGHAGLFSDTHDMAVLMQVMLNGGGY... | proteolysis plasma membrane serine-type D-Ala-D-Ala carboxypeptidase activity Salmonella typhimurium Carboxypeptidase Cell inner membrane Cell membrane Hydrolase Membrane Protease Reference proteome Transmembrane Transmembrane helix MKFTLVATVL MKFTLVATVLLTFSLSAFAVEYPVLTTASPDQVGFDSQKLHRLDGWIQNQIDAGYPSINLLVIKDNHIVLQKAWGY... |
regulation of DNA-templated transcription | cytosol; protein-DNA complex | phosphorelay response regulator activity transcription cis-regulatory region binding | Salmonella typhimurium | DNA-binding Phosphoprotein Reference proteome Transcription Transcription regulation Two-component regulatory system | MIKVLIVDDE | MIKVLIVDDEPLARENLRILLQGQDDIEIVGECANAVEAIGAVHKLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKPIEEKRLEKTLHRLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMDDVAFVSSRMSGVYVTSSEGKEGFTELTLRTLESRTPLLRCHRQFLVNMAHLQEIRLEDNGQAELILRNGLTVPVSRRYLKSLKEAIGL | regulation of DNA-templated transcription cytosol; protein-DNA complex phosphorelay response regulator activity transcription cis-regulatory region binding Salmonella typhimurium DNA-binding Phosphoprotein Reference proteome Transcription Transcription regulation Two-component regulatory system MIKVLIVDDE MIKVLIVDDEPLA... |
transmembrane transport | plasma membrane | transmembrane transporter activity | Salmonella typhimurium | Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport | MTELPDNTRW | MTELPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPASGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLVLARVLQGVGGAMMVPVGRLTVMKIVPRAQYMAAMTFVTLPGQIGPLLGPALGGVLVEYASWHWIFLINIPVGIVGAMATFMLMPNYIIETRRFDLPGFLLLAIGMAVLTLALDGSKSMGISPWTLAGLAAGGAAAILLYLFHAKKNSGALFSLRLFRTPTFSLGLLGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQI... | transmembrane transport plasma membrane transmembrane transporter activity Salmonella typhimurium Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport MTELPDNTRW MTELPDNTRWQLWIVAFGFFMQSLDTTIVNTALPSMAKSLGESPLHMHMVVVSYVLTVAVMLPASGWLADKIGVRNIFFAAIVLFTLGSLFCALSGTLNQLVLAR... |
fatty acid metabolic process regulation of fatty acid metabolic process | cytoplasm | DNA binding DNA-binding transcription factor activity fatty-acyl-CoA binding | Salmonella typhimurium | Activator Cytoplasm DNA-binding Fatty acid metabolism Lipid metabolism Reference proteome Repressor Transcription Transcription regulation | MVIKAQSPAG | MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTALRQHPDKAQEVLATAHEVADHADAFADLDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSSLCEQGAHDQVYETVRRYGHDSGEIWHRMQKNLPGDLAIQGR | fatty acid metabolic process regulation of fatty acid metabolic process cytoplasm DNA binding DNA-binding transcription factor activity fatty-acyl-CoA binding Salmonella typhimurium Activator Cytoplasm DNA-binding Fatty acid metabolism Lipid metabolism Reference proteome Repressor Transcription Transcription regulation... |
D-alanine catabolic process | cytoplasm; plasma membrane | D-amino-acid dehydrogenase activity | Salmonella typhimurium | Cell inner membrane Cell membrane FAD Flavoprotein Membrane Oxidoreductase Reference proteome | MRVVILGSGV | MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTPFQLKWMWQMLRNCDTRHYMENKGRMVRLAEYSRDCLKTLRAATGIEYEGRQGGTLQLFRTAQQYENATRDIAVLEDAGVPYQLLESSRLAEVEPALAEVAHKLTGGLRLPNDETGDCQLFTQRLARMAEQAGVTFRFNTPVEKLLYENDQIYGVKCADEIIKADAYVMAFGSYSTAMLKGIVDIPVYPLKGYSLTIPIVEPDGAPVSTILDETYKIAITRFDKRIRVGGMAEIVGFN... | D-alanine catabolic process cytoplasm; plasma membrane D-amino-acid dehydrogenase activity Salmonella typhimurium Cell inner membrane Cell membrane FAD Flavoprotein Membrane Oxidoreductase Reference proteome MRVVILGSGV MRVVILGSGVVGVTSAWYLSQAGHDVTVIDRESGPAQETSAANAGQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTPFQLKWMWQMLRNCDTRHY... |
mRNA catabolic process | cytosol | exoribonuclease II activity RNA binding | Salmonella typhimurium | Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome RNA-binding | MFQDNPLLAQ | MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIVAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQHEFKEGDWAVAEMRRHPLKGDRSFYADLTQYITFADDHFVPWWVTLARHNLEKEAPNGVATEMLDEGLERQDLTALNFVTIDSASTEDMDDALYAEELADGRLQLTVAIADPTAWIAEGSKLDNTAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPALACRMIIAADGTIDDDIAFFAATIESKAKLAYDNVSDWL... | mRNA catabolic process cytosol exoribonuclease II activity RNA binding Salmonella typhimurium Cytoplasm Exonuclease Hydrolase Nuclease Reference proteome RNA-binding MFQDNPLLAQ MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRIVAVIHTEKERESAEPEELIEPFLTRFVGKVQGKNDRLSIVPDHPLLKDAIPCRAARGVQHEFKEGDWAVAEMRRHPLKGDRSF... |
beta-glucan biosynthetic process | outer membrane-bounded periplasmic space | carbohydrate binding catalytic activity | Salmonella typhimurium | Periplasm Reference proteome Signal | MNRRRFIKGS | MNRRRFIKGSMAMAAVCGSSGIASLFSQAAFAAESDIADGKIVRFDFAGLQSMAQALAKKPWGGAPGPLPDTLANLTPQAYNSIQYDAAHSLWNGVANRQLDIQFFHVGMGFRRRVRMFSVDTTTHLAREIHFRPELFKYNDAGVDTTQLEGQSDLGFAGFRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDGQEEFPDFTAFWFDTAKPGDTTFTVYALLDSASVTGAYKFVIHCEKSQVIMDVENHLYARKDIKQLGIAPMTSMFSCGNNERRVCDTIHPQIHDSDRLAMWRGNGEWICRPLNN... | beta-glucan biosynthetic process outer membrane-bounded periplasmic space carbohydrate binding catalytic activity Salmonella typhimurium Periplasm Reference proteome Signal MNRRRFIKGS MNRRRFIKGSMAMAAVCGSSGIASLFSQAAFAAESDIADGKIVRFDFAGLQSMAQALAKKPWGGAPGPLPDTLANLTPQAYNSIQYDAAHSLWNGVANRQLDIQFFHVGMGFRRRVRMFSVDTTTHLAREIHFRPE... |
response to acidic pH | chloride channel complex; plasma membrane | voltage-gated chloride channel activity | Salmonella typhimurium | Cell inner membrane Cell membrane Chloride Chloride channel Ion channel Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport Voltage-gated channel | MFRRLLIATL | MFRRLLIATLIGILAALAVAAFRHAMQLLEWIFLSNDTGSLVNAAEGLSPWRRLITPALGGLAAGLLLWGWQKMNQQRPHAPTDYMEALQTDGQFDVGASLVKSLASLLVVVSGSAIGREGAMILLAALAASSFARRFTPREEWKLWIASGAAAGMAGAYHAPLAGSLFIAEILFGTLMLASLGPVVVSAVVALLTTHVLNGSDSLLYTVHLTVDLHAREYVMIVSTGLVAGLCGPLLMWLMTASHNSFLRLKLSPPWQLALGGLIVGLLSLLTPTVWGNGYSVVQSFLLSPPLFSLIGGIFVCKILAVLASSGSGAPGG... | response to acidic pH chloride channel complex; plasma membrane voltage-gated chloride channel activity Salmonella typhimurium Cell inner membrane Cell membrane Chloride Chloride channel Ion channel Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport Voltage-gated channel MFRRLLIATL MF... |
cobalamin transport | plasma membrane | transmembrane transporter activity vitamin transmembrane transporter activity | Salmonella typhimurium | Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport | MLTFARQQQR | MLTFARQQQRRNVRWLLSLSLLVLLATLLSLCAGEQWIAPGDWLSARGELFVWQIRLPRTLAVLLVGAALALSGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLPGWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSFDLRQLMYWMMGGFGGVDWQQSWLMIALIPVLIWICCQSQPLNMLALGETSARQLGLPLWFWRNLLVVATGWMVGVSVAMAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGAIALLLADVVARLALASAELPIGVVTATLGAPVFIWL... | cobalamin transport plasma membrane transmembrane transporter activity vitamin transmembrane transporter activity Salmonella typhimurium Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport MLTFARQQQR MLTFARQQQRRNVRWLLSLSLLVLLATLLSLCAGEQWIAPGDWLSARGELFVWQIRLPRTLAVLLV... |
DNA damage response nucleotide-excision repair SOS response | excinuclease repair complex | nuclease activity | Salmonella typhimurium | DNA damage DNA excision DNA repair Excision nuclease Hydrolase Reference proteome SOS response | MVRRQSAPRL | MVRRQSAPRLEFEAAAIYEYPEHLRPFLSEAPALPGVYIFHSESDTLPLYIGKSVNIRSRVLSHLRTPDEATMLRQARRISWICTAGEMGALLLEARLIKEQQPLFNKRLRRNRQLCSLQLSEQKIEVVSARSVDFSHEPNLFGLFANRRAALQSLQNLADEQKLCYGLLGLEPVSRGRACFRFALKRCAGACCGQETPQAHFLRLQASLERLRVVCWPWKGAIALKESRPQMTQFHIINNWLWLGAVPSLDEAATLVRTPAGFDQDGYKILCKPLMSGQYEIIELHTDCRQS | DNA damage response nucleotide-excision repair SOS response excinuclease repair complex nuclease activity Salmonella typhimurium DNA damage DNA excision DNA repair Excision nuclease Hydrolase Reference proteome SOS response MVRRQSAPRL MVRRQSAPRLEFEAAAIYEYPEHLRPFLSEAPALPGVYIFHSESDTLPLYIGKSVNIRSRVLSHLRTPDEATMLRQARRISWICT... |
glucan biosynthetic process | plasma membrane | hexosyltransferase activity | Salmonella typhimurium | Cell inner membrane Cell membrane Glycosyltransferase Membrane Reference proteome Transferase Transmembrane Transmembrane helix | MNKTTEYIDA | MNKTTEYIDALLLSEREKAALPKTDIRAVHQALDAEHRTYSREDDSPQGSVKARLEHAWPDSLAKGQLIKDDEGRDQLQAMPKATRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYVSRLTKEEQASEQKWRTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDIWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVSRVFAGLRATWESVKATGNAAHFDVYILSDSYNPDICVAEQKAWMELIAEVQGEGQIFYRRRRRR... | glucan biosynthetic process plasma membrane hexosyltransferase activity Salmonella typhimurium Cell inner membrane Cell membrane Glycosyltransferase Membrane Reference proteome Transferase Transmembrane Transmembrane helix MNKTTEYIDA MNKTTEYIDALLLSEREKAALPKTDIRAVHQALDAEHRTYSREDDSPQGSVKARLEHAWPDSLAKGQLIKDDEGRDQLQAMPKATR... |
glucan biosynthetic process | plasma membrane | acyltransferase activity, transferring groups other than amino-acyl groups transferase activity, transferring one-carbon groups | Salmonella typhimurium | Acyltransferase Cell membrane Membrane Reference proteome Transferase Transmembrane Transmembrane helix | MSSVPAPREY | MSSVPAPREYFLDSIRAWLMLLGIPFHISLIYSTHSWHVNSAAPSWWLTLFNDFIHAFRMQVFFVISGYFSYMLFLRYPLKHWWKVRVERVGIPMLTAIPLLTLPQFILLQYVKEKTENWPTLSAYEKYNTLAWELISHLWFLLVLVILTTVSIGIFTWFQKRQETSKPRPAAISLAKLSLIFFLLGVAYAAIRRIIFIVYPAILSDGMFNFIVMQTLFYVPFFILGALAFIHPDLKARFTTPSRGCTLGAAVAFIAYLLNQRYGSGDAWMYETESVITMVMGLWMVNVVFSLGHRLLNFQSARVTYFVNASLFIYLVHH... | glucan biosynthetic process plasma membrane acyltransferase activity, transferring groups other than amino-acyl groups transferase activity, transferring one-carbon groups Salmonella typhimurium Acyltransferase Cell membrane Membrane Reference proteome Transferase Transmembrane Transmembrane helix MSSVPAPREY MSSVPAPREY... |
cell cycle cell division regulation of DNA-templated transcription | cytoplasm | sequence-specific DNA binding | Salmonella typhimurium | Cell cycle Cell division Cytoplasm DNA-binding Reference proteome | MKYQQLENLE | MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLLLALENEPVRVNVWIDRHMNPALLNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGKTLSETIVQLIEDAEHKEKYATQMTTLKQDLQALLGKK | cell cycle cell division regulation of DNA-templated transcription cytoplasm sequence-specific DNA binding Salmonella typhimurium Cell cycle Cell division Cytoplasm DNA-binding Reference proteome MKYQQLENLE MKYQQLENLESGWKWKYLVKKHREGELITRYVEASAAQEAVNLLLALENEPVRVNVWIDRHMNPALLNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFMVWQRLAGLAQRRGK... |
potassium ion transport | plasma membrane | monoatomic cation transmembrane transporter activity | Salmonella typhimurium | Cell membrane Membrane Reference proteome Repeat Transmembrane Transmembrane helix Transport | MNINVADLLN | MNINVADLLNGNYILLLFVVLALGLCLGKLRLGSVQLGNSIGVLVVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALLIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGIASTQLSSALDNLSLGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFRNGKEVFDRDLLDMRIVTEEIVVKNHNAVGRRLA... | potassium ion transport plasma membrane monoatomic cation transmembrane transporter activity Salmonella typhimurium Cell membrane Membrane Reference proteome Repeat Transmembrane Transmembrane helix Transport MNINVADLLN MNINVADLLNGNYILLLFVVLALGLCLGKLRLGSVQLGNSIGVLVVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMV... |
dipeptide transport | ATP-binding cassette (ABC) transporter complex; outer membrane-bounded periplasmic space | peptide transmembrane transporter activity | Salmonella typhimurium | Periplasm Reference proteome Signal Transport | MTQFITHKWL | MTQFITHKWLAALGLASSIAAFPALAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKDMKVKNVLAEGYTVSDDGLTYTITLRQGVKFQDGADFNAAAVKANLDRASNPDNHLKRYNLYKNIAKTEVVDPATVKITLKQPFSAFINILAHPATAMISPQALEKYGKDIGFHPVGTGPYQLETWNQTDFVKVKKFAGYWQQGLPKLDSITWRPVTDNNTRAAMLQTGEAQFAFPIPYEQAALLAKNKNLELVASPSIMQRYISMNVTQKPFDNPKVREALNYAINRQALVKVAFAGYATPATGVVPPSIAY... | dipeptide transport ATP-binding cassette (ABC) transporter complex; outer membrane-bounded periplasmic space peptide transmembrane transporter activity Salmonella typhimurium Periplasm Reference proteome Signal Transport MTQFITHKWL MTQFITHKWLAALGLASSIAAFPALAAKDVVVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKDMKVKNVLAEGYTVSDDGLTY... |
rRNA base methylation | cytoplasm | 23S rRNA (adenine(1618)-N(6))-methyltransferase activity | Salmonella typhimurium | Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase | MSAQKPGLHP | MSAQKPGLHPRNRHQHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAHFYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGETTGSIPAQATILDVGVGANCIYPLIGVHEYGWRFTGSEVSDAAMSSAQAIIQANTGLSRAIRLRRQKDPAAIFTGIIHKNEFYDATLCNPPFHDSAAAARAGSERKRRNLGQNKDDALNFGGQQQELWCEGGEVAFIKKMIAESQSFRRQVLWFTTLVSRGENLPPLYRALTEAGAVKVVKKEMAQGQKQSRFIAWTFMDDDQRRRFITRKR | rRNA base methylation cytoplasm 23S rRNA (adenine(1618)-N(6))-methyltransferase activity Salmonella typhimurium Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase MSAQKPGLHP MSAQKPGLHPRNRHQHRYDLAALCQTTPELTSFLIRTPAGEQSVDFANPQAVKALNKALLAHFYAVTHWDIPPGFLCPPVPGRADYIHHLADLLGETT... |
glucose metabolic process pentose-phosphate shunt | cytosol | 6-phosphogluconolactonase activity | Salmonella typhimurium | Carbohydrate metabolism Glucose metabolism Hydrolase Reference proteome | MKQTVYTASP | MKQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHHGRFVFVGSYNAGNVSVTRLQDGLPVELVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGPRHMVFHPNRQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSVEGFQPTEAQPRGFNIDNSGKYLIAAGQKSHHIAVYEITGTQGLLTEKGRYAVG... | glucose metabolic process pentose-phosphate shunt cytosol 6-phosphogluconolactonase activity Salmonella typhimurium Carbohydrate metabolism Glucose metabolism Hydrolase Reference proteome MKQTVYTASP MKQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHHGRFVFVGSYNAGNVSVTRLQDGLPVELVD... |
zinc ion transmembrane transport | plasma membrane | zinc ion transmembrane transporter activity | Salmonella typhimurium | Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport Zinc Zinc transport | MAHSHSHADS | MAHSHSHADSHLPKDNNARRLLFAFIVTAGFMLLEVVGGILSGSLALLADAGHMLTDAAALLFALLAVQFSRRPPTVRHTFGWLRLTTLAAFVNAIALVVITLLIVWEAIERFYTPRPVAGNLMMVIAVAGLLANLFAFWILHRGSDEKNLNVRAAALHVMGDLLGSVGAIVAALIIIWTGWTPADPILSILVSVLVLRSAWRLLKDSVNELLEGAPVSLDINALQRHLSREIPEVRNVHHVHVWMVGEKPVMTLHAQVIPPHDHDALLERIQDFLMHEYHIAHATIQMEYQVCHGPDCHLNQTSSGHVHHH | zinc ion transmembrane transport plasma membrane zinc ion transmembrane transporter activity Salmonella typhimurium Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Transmembrane Transmembrane helix Transport Zinc Zinc transport MAHSHSHADS MAHSHSHADSHLPKDNNARRLLFAFIVTAGFMLLEVVGGILSGSLALLADAGH... |
potassium ion transmembrane transport | plasma membrane | P-type potassium transmembrane transporter activity potassium ion binding | Salmonella typhimurium | Cell inner membrane Cell membrane Ion transport Membrane Potassium Potassium transport Reference proteome Transmembrane Transmembrane helix Transport | MAAQGFLLIA | MAAQGFLLIASFLLILLVLAKPLGSGLARLIAAVPLPGVAGIERILWRTLGITDHEMNWRQYLLALLTLNLLGLGILFCLLFWQEWLPLNPQRLPGLSGDLALNTAVSFVTNTNWQAYSGESTLSYFSQMAGLTVQNFLSAATGIAVVFALIRAFTRQNVHTLGNAWQDLVRITLWILFPVALIIALFFIQQGVPQNLSAYQPITTLEGAKQLLPMGPVASQEAIKMLGTNGGGFFNANSSHPFENPTALTNLAQMLAIFLIPAALCFAFGEAAGDRCQGRALLWAMSFIFVVCVAVVMWAEVQGNPHLLAAGADSSVNM... | potassium ion transmembrane transport plasma membrane P-type potassium transmembrane transporter activity potassium ion binding Salmonella typhimurium Cell inner membrane Cell membrane Ion transport Membrane Potassium Potassium transport Reference proteome Transmembrane Transmembrane helix Transport MAAQGFLLIA MAAQGFLL... |
potassium ion transmembrane transport | plasma membrane | ATP binding P-type potassium transmembrane transporter activity | Salmonella typhimurium | ATP-binding Cell inner membrane Cell membrane Ion transport Membrane Nucleotide-binding Potassium Potassium transport Reference proteome Transmembrane Transmembrane helix Transport | MIGLRPAFST | MIGLRPAFSTMLFLLLLTGGVYPLLTTALGQWWFPWQANGSLIHKDNVIRGSALIGQSFTAAGYFHGRPSATADTPYNPLASGGSNLAASNPELDAQIQARVAALRAANPQASSAVPVELATASASGLDNNLTPGAAAWQIPRVAAARQLPVEQVAQLVAEYTHRPLARFLGQPVVNIVELNLALDALQGHRAK | potassium ion transmembrane transport plasma membrane ATP binding P-type potassium transmembrane transporter activity Salmonella typhimurium ATP-binding Cell inner membrane Cell membrane Ion transport Membrane Nucleotide-binding Potassium Potassium transport Reference proteome Transmembrane Transmembrane helix Transpor... |
nucleobase-containing small molecule interconversion purine nucleoside catabolic process pyrimidine nucleobase metabolic process | cytosol | purine nucleosidase activity uridine nucleosidase activity | Salmonella typhimurium | Glycosidase Hydrolase Reference proteome | MALPIIIDCD | MALPIIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNVLRMLTLLKRLDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPSFAPQSGTAVELMAKTLRESAQPVTIVSTGPQTNVALLLNSHPELHTKIARIVIMGGAMALGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHAADIERFRAIGNPISTIVAELLDFFMEYHKDEKWGFVGAPLHDPCTIAWLLKPEIFTTVERWVGVETQGKYTQGMTVVDYYFLTGNKPNATVMVDVDRQGFVDLLAERLQYYA | nucleobase-containing small molecule interconversion purine nucleoside catabolic process pyrimidine nucleobase metabolic process cytosol purine nucleosidase activity uridine nucleosidase activity Salmonella typhimurium Glycosidase Hydrolase Reference proteome MALPIIIDCD MALPIIIDCDPGHDDAIALVLALASPELEVKAITSSAGNQTPEKTLRNV... |
leucyl-tRNA aminoacylation | cytosol | aminoacyl-tRNA editing activity ATP binding leucine-tRNA ligase activity | Salmonella typhimurium | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MQEQYRPEEI | MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLGFGYDWSREIATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLRDLDKLDHWPDTVKTMQRNWIGRSEGVEITFDVKGYDNTLTVYTTRPDTFMGATYLAVAAGHPLAQKAAANNAELAAFIDECRNTKVAEAEMATMEKKGVDTGYKAIHPLTGEEIPV... | leucyl-tRNA aminoacylation cytosol aminoacyl-tRNA editing activity ATP binding leucine-tRNA ligase activity Salmonella typhimurium Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MQEQYRPEEI MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVAR... |
enterobactin biosynthetic process | cytosol | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity | Salmonella typhimurium | Cytoplasm Hydrolase Reference proteome | MIWKRHLTLD | MIWKRHLTLDELNATSQNTLVAHLGIVYTRLGDDVLEAEMPVDARTHQPFGLLHGGASAALAETLGSMAGYLMTRDGQCVVGTELNATHHRAISQGKVRGVCLPLHLGRQNQSWEITLFDEQGRRCCTCRLGTAVMG | enterobactin biosynthetic process cytosol 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity Salmonella typhimurium Cytoplasm Hydrolase Reference proteome MIWKRHLTLD MIWKRHLTLDELNATSQNTLVAHLGIVYTRLGDDVLEAEMPVDARTHQPFGLLHGGASAALAETLGSMAGYLMTRDGQCVVGTELNATHHRAISQGKVRGVCLPLHLGRQNQSWEITLFDEQGRRCCTCRLGTAVMG |
adenine salvage AMP salvage purine ribonucleoside salvage | cytosol | adenine phosphoribosyltransferase activity | Salmonella typhimurium | Cytoplasm Glycosyltransferase Purine salvage Reference proteome Transferase | MTATAQQLEF | MTATAQQLEFLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYELEYGTDQLEIHVDAIKPGDNVLVVDDLLATGGTIEATVKLIRRLGGKVTDAAFIINLFDLGGEQRLEKQGITCYSLVPFPGH | adenine salvage AMP salvage purine ribonucleoside salvage cytosol adenine phosphoribosyltransferase activity Salmonella typhimurium Cytoplasm Glycosyltransferase Purine salvage Reference proteome Transferase MTATAQQLEF MTATAQQLEFLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALSIELLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPRKLPRETIAETYE... |
DNA-templated transcription termination transcription antitermination | cytosol | RNA binding | Salmonella typhimurium | Reference proteome RNA-binding Transcription Transcription antitermination Transcription regulation | MKPAARRRAR | MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLSGVATNSAYLDGLMKPYLSRLLEELGQVEKAVLRIALFELSKRSDVPYKVAINEAIELAKTFGAEDSHKFVNGVLDKAAPVIRPNKK | DNA-templated transcription termination transcription antitermination cytosol RNA binding Salmonella typhimurium Reference proteome RNA-binding Transcription Transcription antitermination Transcription regulation MKPAARRRAR MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVDVLYFRELLSGVATNSAYLDGLMKPYLSRLLEELGQVEKAVLRIALFELSKRS... |
queuosine biosynthetic process tRNA wobble guanine modification | cytoplasm | S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity | Salmonella typhimurium | Cytoplasm Queuosine biosynthesis Reference proteome S-adenosyl-L-methionine Transferase | MRVTDFSFEL | MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGTELLLGDDESIHATMTARHGALFEVEFNDPRPVLDILNAIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLAALREKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQEVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKSDLIEPFFGDTQIFIYPGYQYKVIDALITNFHLPESTLIMLVSAFAGYQHT... | queuosine biosynthetic process tRNA wobble guanine modification cytoplasm S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity Salmonella typhimurium Cytoplasm Queuosine biosynthesis Reference proteome S-adenosyl-L-methionine Transferase MRVTDFSFEL MRVTDFSFELPESLIAHYPQPERSRCRLLSLEGPTGALTHGTFTDLLDKLNPGDLLVFNN... |
leucine biosynthetic process | 3-isopropylmalate dehydratase complex | 3-isopropylmalate dehydratase activity | Salmonella typhimurium | Amino-acid biosynthesis Branched-chain amino acid biosynthesis Leucine biosynthesis Lyase Reference proteome | MDTFKQISGR | MDTFKQISGRIAPMLEPNIDTDVIMPKQFLKGIDRQGLDKGVFFDRRFMAGGQPNPDFILNMPGWQSATFLLVGPNFGCGSSREHAVWGLKQLGVRGLIGSTFAGIFDDNCQRNGILTVSLDEPALARLAQLAASADTNSITVSLDRCEITTAEETISFVISELKRAMLAAGEDAIAWTLQYLPEIENFEVAHYSRRPWLKRPASPRG | leucine biosynthetic process 3-isopropylmalate dehydratase complex 3-isopropylmalate dehydratase activity Salmonella typhimurium Amino-acid biosynthesis Branched-chain amino acid biosynthesis Leucine biosynthesis Lyase Reference proteome MDTFKQISGR MDTFKQISGRIAPMLEPNIDTDVIMPKQFLKGIDRQGLDKGVFFDRRFMAGGQPNPDFILNMPGWQSATFL... |
tRNA modification | cytoplasm | ATP binding ligase activity, forming carbon-nitrogen bonds | Salmonella typhimurium | ATP-binding Cytoplasm Ligase Nucleotide-binding Reference proteome tRNA processing | MTTLTLNTSL | MTTLTLNTSLLSSRRILAAFSGGLDSTVLLHQLVLWRERHPDVTLRAIHIHHGLSPHADSWVRHCETVCERWQVPLVVERVTLADNGLGIEAHAREARYRAFAQTLLPGEVLATAQHLDDQCETFLLALKRGSGPAGLSAMGERSPFAGTLLLRPLLRETRKTLEQWAVRHGLCWIEDESNQDDAYDRNFLRLRALPLLQQRWPHFPAAVARSATLCAEQERLLDELLASDLTDCITAEGTLRLSPLMSMSDVRRAAILRRWLAMRNAPMPSRDALERIWQEVALARDDASPCLRFGDHEIRRYQSQLWWIKSVAGQHET... | tRNA modification cytoplasm ATP binding ligase activity, forming carbon-nitrogen bonds Salmonella typhimurium ATP-binding Cytoplasm Ligase Nucleotide-binding Reference proteome tRNA processing MTTLTLNTSL MTTLTLNTSLLSSRRILAAFSGGLDSTVLLHQLVLWRERHPDVTLRAIHIHHGLSPHADSWVRHCETVCERWQVPLVVERVTLADNGLGIEAHAREARYRAFAQTLLPGEVLATAQ... |
glutamyl-tRNA aminoacylation tRNA modification | cytosol | ATP binding glutamate-tRNA ligase activity zinc ion binding | Salmonella typhimurium | Aminoacyl-tRNA synthetase ATP-binding Ligase Metal-binding Nucleotide-binding Reference proteome Zinc | MTDSHYIGRF | MTDSHYIGRFAPSPSGELHFGSLIAALGSYLQARAQRGIWRVRIEDIDPPREVPGAAATILRQLEHYGLHWDGEVLWQSQRHEAYREALAWLHEQGLSYYCTCPRSRIQRLGGIYDGHCRTLCHGPENAAVRIKQQHPVMHFHDALRGDIQADPQLASEDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQLSLYKQFGWRAPGYVHLPLALNEQGAKLSKQNHAPALATGDPRPVLVQALRFLGQRDVVAWQEMSVEELLRFAVAHWRLTAVPTSANVNPAFSNASR | glutamyl-tRNA aminoacylation tRNA modification cytosol ATP binding glutamate-tRNA ligase activity zinc ion binding Salmonella typhimurium Aminoacyl-tRNA synthetase ATP-binding Ligase Metal-binding Nucleotide-binding Reference proteome Zinc MTDSHYIGRF MTDSHYIGRFAPSPSGELHFGSLIAALGSYLQARAQRGIWRVRIEDIDPPREVPGAAATILRQLEHYGL... |
rRNA base methylation | cytoplasm | rRNA (cytosine-N4-)-methyltransferase activity | Salmonella typhimurium | Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase | MMENFKHTTV | MMENFKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQTINDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTFGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLSVLAPGGRLSIISFHSLEDRIVKRFMREQSRGPQVPAGLPMTEAQLKKLGGRELRALGKLMPGEKEVAENPRARSSVLRIAERTNA | rRNA base methylation cytoplasm rRNA (cytosine-N4-)-methyltransferase activity Salmonella typhimurium Cytoplasm Methyltransferase Reference proteome rRNA processing S-adenosyl-L-methionine Transferase MMENFKHTTV MMENFKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAQTINDPRFSIIHGPFSALADYVAERELTGKIDGILLDLGVSSPQ... |
negative regulation of DNA-templated transcription initiation | cytoplasm; nucleoid | DNA-binding transcription factor activity transcription cis-regulatory region binding | Salmonella typhimurium | Cytoplasm DNA-binding Reference proteome Repeat Repressor Transcription Transcription regulation | MFRGATLVNL | MFRGATLVNLDSKGRLTVPTRYREQLIESATGQMVCTIDIHHPCLLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHAGLTKEVMLVGQFNKFELWDETTWYQQVKEDIDAEQSATETLSERLQDLSL | negative regulation of DNA-templated transcription initiation cytoplasm; nucleoid DNA-binding transcription factor activity transcription cis-regulatory region binding Salmonella typhimurium Cytoplasm DNA-binding Reference proteome Repeat Repressor Transcription Transcription regulation MFRGATLVNL MFRGATLVNLDSKGRLTVPTR... |
negative regulation of DNA-templated transcription peptide transport positive regulation of DNA-templated transcription | outer membrane-bounded periplasmic space | DNA binding peptide transmembrane transporter activity | Salmonella typhimurium | Activator DNA-binding Reference proteome Repressor Transcription Transcription regulation | MPSGRLQQQF | MPSGRLQQQFIRLWQCCDGKTQDTTLNELADLLNCSRRHMRTLLNTMQARGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKSAVRQMLISHLGRSFRQGRHILRVLYYRPMHNLLPGTALRRSETHIARQIFSSLTRVNEENGELEADIAHHWQQISPLLWRFYLRPGIHFHHGRELEMEDVISSLTRINTLPLYSHITKIDSPTAWTLDIHLSQPDRWLPWLLGQVPAMILPRKWETLANFASHPIGTGPYAVRRNTPNQLKILAFDDYFGYRALIDEVNVWVLPDISEEPACGLMLEGP... | negative regulation of DNA-templated transcription peptide transport positive regulation of DNA-templated transcription outer membrane-bounded periplasmic space DNA binding peptide transmembrane transporter activity Salmonella typhimurium Activator DNA-binding Reference proteome Repressor Transcription Transcription re... |
4-(trimethylammonio)butanoate transport carnitine metabolic process | plasma membrane | (R)-carnitine:4-(trimethylammonio)butanoate antiporter activity transmembrane transporter activity | Salmonella typhimurium | Antiport Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport | MKNEKKKSGI | MKNEKKKSGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGDEKPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKEIGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMDVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMHLPRMLFYTDAIGKGGFPQGWTVFY... | 4-(trimethylammonio)butanoate transport carnitine metabolic process plasma membrane (R)-carnitine:4-(trimethylammonio)butanoate antiporter activity transmembrane transporter activity Salmonella typhimurium Antiport Cell inner membrane Cell membrane Membrane Reference proteome Transmembrane Transmembrane helix Transport... |
sodium ion transport | plasma membrane | decarboxylation-driven active transmembrane transporter activity lyase activity | Salmonella typhimurium | 3D-structure Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Translocase Transmembrane Transmembrane helix Transport | MESLNALLQG | MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGMALTALESLLAHHDAGQLAVIAAKLNCAPDVHAIKEALALALPSVQGQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTLNYFGLISFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPIMKALTSETERKIRMVQLRTVSKREKILFPVVLLMLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIF... | sodium ion transport plasma membrane decarboxylation-driven active transmembrane transporter activity lyase activity Salmonella typhimurium 3D-structure Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Translocase Transmembrane Transmembrane helix Transport MESLNALLQG MESLNALLQGMGLMHLGAGQ... |
purine nucleobase metabolic process purine nucleoside catabolic process pyrimidine nucleobase metabolic process | cytosol | purine nucleosidase activity | Salmonella typhimurium | Glycosidase Hydrolase Reference proteome | MTASLHIILD | MTASLHIILDTDPGIDDAAAIAAALFAPQLDLQLITTVAGNVSVEKTTRNALQLLHFWNSDIPLAQGAATPLLRPLRDAAYVHGESGMEGYDFVDHQRQPLAKPAFIAIRDVLMNAPEPMTLVAIGPLTNIALLLMHYPECACNIRRLVLMGGSAGRGNFTPNAEFNIAVDPEAAALVFRSGLEIVMCGLDVTNQAMLSPDFLNKLPALNRTGKMLHSLFNHYRSGSMRTGVRMHDLCAIAWLVRPELFTLQSCFVAVETQGQYTAGTTVVDIEGRLGQPANAQVALALDVDGFRQWVAEVFAYAP | purine nucleobase metabolic process purine nucleoside catabolic process pyrimidine nucleobase metabolic process cytosol purine nucleosidase activity Salmonella typhimurium Glycosidase Hydrolase Reference proteome MTASLHIILD MTASLHIILDTDPGIDDAAAIAAALFAPQLDLQLITTVAGNVSVEKTTRNALQLLHFWNSDIPLAQGAATPLLRPLRDAAYVHGESGMEGYDFVDH... |
regulation of pH | plasma membrane | sodium:proton antiporter activity | Salmonella typhimurium | 3D-structure Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Transmembrane Transmembrane helix Transport | MKHLHRFFSS | MKHLHRFFSSDASGGIILIIAAALAMLMANMGATSGWYHDFLETPVQLRVGALEINKNMLLWINDALMAVFFLLIGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNYSDPVTREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIVIIALFYTSDLSIVSLGVAAFAIAVLALLNLCGVRRTGVYILVGAVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSLQGVTIDGLTSMLPLGIIAGLLIGKPLGISLFCWLALRFKLAHLP... | regulation of pH plasma membrane sodium:proton antiporter activity Salmonella typhimurium 3D-structure Antiport Cell inner membrane Cell membrane Ion transport Membrane Reference proteome Sodium Sodium transport Transmembrane Transmembrane helix Transport MKHLHRFFSS MKHLHRFFSSDASGGIILIIAAALAMLMANMGATSGWYHDFLETPVQLRVGAL... |
RNA processing | cytoplasm | ATP binding RNA-3'-phosphate cyclase activity | Pyrobaculum aerophilum | ATP-binding Cytoplasm Ligase Nucleotide-binding Reference proteome | MAVRIDGSYG | MAVRIDGSYGEGGGQILRTSIALSALLGRPVEIVNIRAKRANPGLQPQHLTGVKVAALLTDAEVKGAEKGSTRLYFEPKTLKCGNFSIDIGTAGSISLIVQTLAPILLYAPCPTQITVTGGTDVAWAPPIDYMRFVFTKVLERFGAKLSIELIRRGHYPRGGGRAVVRAEPVKRLKAVESEEFGNVVKISGISHAVNLPPHVAERQAKAAREELSKMGLDADIAIEVRNDGLGPGSGVVIWAVSDAGNVIGGDSLGERGKPAETVGKEAAQKLIAVLKTRASVDPHMADMAVLYMALAEGRSRISTSEETMHLKTNMYII... | RNA processing cytoplasm ATP binding RNA-3'-phosphate cyclase activity Pyrobaculum aerophilum ATP-binding Cytoplasm Ligase Nucleotide-binding Reference proteome MAVRIDGSYG MAVRIDGSYGEGGGQILRTSIALSALLGRPVEIVNIRAKRANPGLQPQHLTGVKVAALLTDAEVKGAEKGSTRLYFEPKTLKCGNFSIDIGTAGSISLIVQTLAPILLYAPCPTQITVTGGTDVAWAPPIDYMRFVFTKVLERFGAKL... |
translation | cytosolic large ribosomal subunit | RNA binding rRNA binding structural constituent of ribosome tRNA binding | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding | MPSWKELVLV | MPSWKELVLVKGHPMQRIYIEKVVVNIGVGASGEKLEKAAGLLKELTGAEPSRRRAKKSIKDFGIRKGEPIGVAVTLRRDQAVNFLMRALQAVNNRVKKTSFDDRGNVCFGIKEHILLPGVKYDPAVGIWGMDVCVKLAKPGLRVQLRRRRRSKVGKRQLVTKEEAIEFFQKVLGVQVD | translation cytosolic large ribosomal subunit RNA binding rRNA binding structural constituent of ribosome tRNA binding Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding tRNA-binding MPSWKELVLV MPSWKELVLVKGHPMQRIYIEKVVVNIGVGASGEKLEKAAGLLKELTGAEPSRRRAKKSIKDFGIRKGEPIGVA... |
translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MPVRPARCYK | MPVRPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARTAFTMTAKLVVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIKEALRRAASKLPLPTRIVIEPKGNGGNKTVT | translation cytosolic large ribosomal subunit structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MPVRPARCYK MPVRPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARTAFTMTAKLVVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIK... |
carbohydrate metabolic process dephosphorylation | cytosol | magnesium ion binding phosphatase activity phosphoglycolate phosphatase activity | Pyrobaculum aerophilum | Carbohydrate metabolism Hydrolase Magnesium Metal-binding Reference proteome | MACKVLVVDL | MACKVLVVDLDGTLTLGRNTYELSAEALLALRRARDAGIRVVLATANGLDFALTVARYLGIRDVIAENGCLVHLDGVTYELCSGDMAEVDRLVLSTGVVKPSHQNKCRKYDLAYIPLREDAVERLRDVLGPGYVVESSGYAIHVRPAGVDKGTAVKWLCQRLGVPCFQVASVGDSDVDVGMLSVSWGFAVGNATPAAKKAAKVVVDGPSGIGFKEAVEIILSGGACAP | carbohydrate metabolic process dephosphorylation cytosol magnesium ion binding phosphatase activity phosphoglycolate phosphatase activity Pyrobaculum aerophilum Carbohydrate metabolism Hydrolase Magnesium Metal-binding Reference proteome MACKVLVVDL MACKVLVVDLDGTLTLGRNTYELSAEALLALRRARDAGIRVVLATANGLDFALTVARYLGIRDVIAENGCL... |
translation | cytosolic small ribosomal subunit | small ribosomal subunit rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MPHRSRDKKG | MPHRSRDKKGRSRSVRPAHPTVPTWIQYTPEEVEQLVVELARRGFQPSQIGLILRDQYGIPLVRPITGKKLTKILEEHGIKYELPEDLLNLIRRALRIRKHLEEHPKDMASRRGLQLVESKIHRLVKYYKRVGKLPPDFVYNPQALSHLAT | translation cytosolic small ribosomal subunit small ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MPHRSRDKKG MPHRSRDKKGRSRSVRPAHPTVPTWIQYTPEEVEQLVVELARRGFQPSQIGLILRDQYGIPLVRPITGKKLTKILEEHGIKYELPEDLLNLIRRALRIRKHLEEHPKDMASRR... |
translation | cytosol; ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MAEKQKAVAK | MAEKQKAVAKQEKVAISKRDPWALKKWFSVYAPSYLGGVFLAEVPANEAQKLLMRTLEVSLYDITKDISHLPIKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIGTAQKSAMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYPPEEEQIVVKEAVAEVTSA | translation cytosol; ribonucleoprotein complex; ribosome structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MAEKQKAVAK MAEKQKAVAKQEKVAISKRDPWALKKWFSVYAPSYLGGVFLAEVPANEAQKLLMRTLEVSLYDITKDISHLPIKLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHRIG... |
proteolysis | plasma membrane | metalloendopeptidase activity zinc ion binding | Pyrobaculum aerophilum | Cell membrane Hydrolase Membrane Metal-binding Metalloprotease Protease Reference proteome Transmembrane Transmembrane helix Zinc | MFPIFDPVAL | MFPIFDPVALGLYIVGYIFMLIIAATIAPKVAKSISGRFTLYGAMALTAVLVVLTTAFIIYLFVTVALPHMGAYGLSFLLGLIFFVVLMNIITYFASPYLINLSYGARPDPRLQQIVDEVAARLGAPFKLKAVVVDGPPNAFAYGNFLTGRYVAVTSSMLALTDRRELEAVIGHEIGHHLHRDNAIMLLFGILPSIVYYLGVTAVHMAMASSGNRGGNPAILAAVGIAAVIVSFLIQLLVLAFSRLREYYADTAGAKAAGKEAMQFALAKIHKFYFANPEAHEVVRDSKFRALFIYALVNAVANPFVSVTRSDLEEIKRS... | proteolysis plasma membrane metalloendopeptidase activity zinc ion binding Pyrobaculum aerophilum Cell membrane Hydrolase Membrane Metal-binding Metalloprotease Protease Reference proteome Transmembrane Transmembrane helix Zinc MFPIFDPVAL MFPIFDPVALGLYIVGYIFMLIIAATIAPKVAKSISGRFTLYGAMALTAVLVVLTTAFIIYLFVTVALPHMGAYGLSFLLG... |
translation | cytosolic large ribosomal subunit | rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MVRRFKRGTK | MVRRFKRGTKYRRGSRTHGWGRVGQHRKSGGSGGKGMVGFHKHKWSLVMKYGESGTGWPFYGKHGFKQPPPISIEWRPINVGTLAELVKELKAEGKVREEGGKYVINLLELGFNKLLGGGTIDLPVIVYTPIASRTAVEKIEKAGGEVRIIHVIHR | translation cytosolic large ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MVRRFKRGTK MVRRFKRGTKYRRGSRTHGWGRVGQHRKSGGSGGKGMVGFHKHKWSLVMKYGESGTGWPFYGKHGFKQPPPISIEWRPINVGTLAELVKELKAEGKVREEGGKYVINLLELG... |
maturation of SSU-rRNA ribosomal small subunit assembly translation | cytosolic small ribosomal subunit | structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MAEEVKFSPY | MAEEVKFSPYEDAVAGLVVQILGRTGIAGEVTQVKIKILEGRDKGRVLTRNVKGPVRLGDIVMLRETEREARRITAR | maturation of SSU-rRNA ribosomal small subunit assembly translation cytosolic small ribosomal subunit structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MAEEVKFSPY MAEEVKFSPYEDAVAGLVVQILGRTGIAGEVTQVKIKILEGRDKGRVLTRNVKGPVRLGDIVMLRETEREARRITAR |
arginyl-tRNA aminoacylation | cytoplasm | arginine-tRNA ligase activity ATP binding | Pyrobaculum aerophilum | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MDPLRQPREE | MDPLRQPREEFVKVLGEVSRELGLPEVPEVERTRRYGFFSARFHKYKVDHSRLAEVVNLIKNKRFEFLSSLSVDGLYLNADLNVSKVAELVFEAVVKMGRKYGFTEECVTGSYLVEHTSANPVHPLHIGHGRNAILGDSLARLLKFCGNKVETHFYVDDCGVQVMYAAMGYNAVKDEVKKRIEKSKPDVVIGHVYSATNAVAEIGRLKKELEKAQDDERKREILREIDEWVAVLKRLMDSEGDIISKIAEELGRRDLLNEAVELNRRYESGDPEAKGVVREVVDLVLKGQRETLARLGVEIDKWDYESELTVWSSEAMRI... | arginyl-tRNA aminoacylation cytoplasm arginine-tRNA ligase activity ATP binding Pyrobaculum aerophilum Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MDPLRQPREE MDPLRQPREEFVKVLGEVSRELGLPEVPEVERTRRYGFFSARFHKYKVDHSRLAEVVNLIKNKRFEFLSSLSVDGLYLNADLNVSKVAELVF... |
translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MVKRTHGYRY | MVKRTHGYRYKTRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTVVGIRGRAYVIETFLGDKKKIIITTPEHLKPYQGGS | translation cytosolic large ribosomal subunit structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MVKRTHGYRY MVKRTHGYRYKTRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTVVGIRGRAYVIETFLGDKKKIIITTPEHLKPYQGGS |
SRP-dependent cotranslational protein targeting to membrane | signal recognition particle | 7S RNA binding | Pyrobaculum aerophilum | Cytoplasm Reference proteome Ribonucleoprotein RNA-binding Signal recognition particle | MKKKGGRILW | MKKKGGRILWLVYIDASVPRSRGRVLPRGLAVEKPSLKEVVQALEELGYKFQVFPDKKYPPLWFEEKWGYVVVETNEKIREIASKVAGKIREMRR | SRP-dependent cotranslational protein targeting to membrane signal recognition particle 7S RNA binding Pyrobaculum aerophilum Cytoplasm Reference proteome Ribonucleoprotein RNA-binding Signal recognition particle MKKKGGRILW MKKKGGRILWLVYIDASVPRSRGRVLPRGLAVEKPSLKEVVQALEELGYKFQVFPDKKYPPLWFEEKWGYVVVETNEKIREIASKVAGKIREMRR |
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) translation | cytosolic small ribosomal subunit | structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MKLGAYYKGG | MKLGAYYKGGDLKKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIPKERKSVKAKIISIISTPANPDFARRNFIVKGSVIQTEVGKALVTSRPGQDGVINAVLIE | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) translation cytosolic small ribosomal subunit structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MKLGAYYKGG MKLGAYYKGGDLKKPSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRL... |
translation | cytosolic small ribosomal subunit | RNA binding rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MVHLRRTLAP | MVHLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRVEGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLGVNAVVIHGSNVGFSGTLYEIVWTLKRKQSVVALKKGDEVRRTILNYVMAVGSEGPVIKISP | translation cytosolic small ribosomal subunit RNA binding rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MVHLRRTLAP MVHLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIISRGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPD... |
cytoplasmic translation ribosomal large subunit biogenesis | cytosolic large ribosomal subunit | RNA binding rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSFTTSAQPR | MSFTTSAQPRKQRRSLYKAPLHLRRKLFNAKLSPELAKKLGVKRLPVRRGDTVLILRGDFKGVTGKVVKVDLKRVRIYVEGATRTNSRGQTVYYPIHPSKVMIVDVDLSDKARQKIIERRKKK | cytoplasmic translation ribosomal large subunit biogenesis cytosolic large ribosomal subunit RNA binding rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSFTTSAQPR MSFTTSAQPRKQRRSLYKAPLHLRRKLFNAKLSPELAKKLGVKRLPVRRGDTV... |
riboflavin biosynthetic process | riboflavin synthase complex | 6,7-dimethyl-8-ribityllumazine synthase activity | Pyrobaculum aerophilum | Reference proteome Riboflavin biosynthesis Transferase | MVRLAIVVAE | MVRLAIVVAEFNYDITQLMLQKAVEHAKFLGAEITYIVKTPGVYDIPMILKELVAKEEVDAVATLGAVIQGATKHDELVATQAARKILDIAVESGKPITLGIIGHGANRIQALERVEEYARRAVEAAVKMARRKKALREAKYNGSTVYID | riboflavin biosynthetic process riboflavin synthase complex 6,7-dimethyl-8-ribityllumazine synthase activity Pyrobaculum aerophilum Reference proteome Riboflavin biosynthesis Transferase MVRLAIVVAE MVRLAIVVAEFNYDITQLMLQKAVEHAKFLGAEITYIVKTPGVYDIPMILKELVAKEEVDAVATLGAVIQGATKHDELVATQAARKILDIAVESGKPITLGIIGHGANRIQALERVEEYARR... |
de novo' pyrimidine nucleobase biosynthetic process pyrimidine nucleotide biosynthetic process | aspartate carbamoyltransferase complex | metal ion binding | Pyrobaculum aerophilum | Metal-binding Pyrimidine biosynthesis Reference proteome Zinc | MSEELLVSKI | MSEELLVSKIENGTVIDHIPAGRALTVLRILGISGKEGLRVALVMNVESKKLGKKDIVKIEGRELTPEEVNIISAVAPTATINIIRNFAVVKKFKVTPPDVIRGRFKCKNPTCVTNAPREPVEPTFYLVRREPPLFICAYCGRYHELGDLL | de novo' pyrimidine nucleobase biosynthetic process pyrimidine nucleotide biosynthetic process aspartate carbamoyltransferase complex metal ion binding Pyrobaculum aerophilum Metal-binding Pyrimidine biosynthesis Reference proteome Zinc MSEELLVSKI MSEELLVSKIENGTVIDHIPAGRALTVLRILGISGKEGLRVALVMNVESKKLGKKDIVKIEGRELTPEEVNI... |
translation | ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MPITLDPEKL | MPITLDPEKLAIVMKHRFQYKICRECGAKNPPDAVKCRRCRSRNLRPKRFRKK | translation ribonucleoprotein complex; ribosome structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MPITLDPEKL MPITLDPEKLAIVMKHRFQYKICRECGAKNPPDAVKCRRCRSRNLRPKRFRKK |
box C/D RNA 3'-end processing rRNA methylation tRNA processing | box C/D RNP complex | histone H2AQ104 methyltransferase activity RNA binding rRNA methyltransferase activity | Pyrobaculum aerophilum | Methyltransferase Reference proteome RNA-binding rRNA processing Transferase tRNA processing | MSIEVVEVKP | MSIEVVEVKPHERHYGVYVVKFEDGTERIATKNLTPGRRVYGERLIKWGGDEYREWNPYRSKLAAAILNGLKLVPIKEGTHILYLGAASGTTPSHISDIVGENGLIYSVEFSPRVFREFMEKLVDQGRRNVVPILGDARFPYQYAHYVKGVDVVYIDVAQPAQAKILADNADYFLKPGGHVMLVIKAMSIDVTAPATETFKQEINTLKERGFDILETVHLEPYDTAHAMVIAKKR | box C/D RNA 3'-end processing rRNA methylation tRNA processing box C/D RNP complex histone H2AQ104 methyltransferase activity RNA binding rRNA methyltransferase activity Pyrobaculum aerophilum Methyltransferase Reference proteome RNA-binding rRNA processing Transferase tRNA processing MSIEVVEVKP MSIEVVEVKPHERHYGVYVVKFE... |
phosphorylation pyrimidine nucleotide metabolic process | cytoplasm | ATP binding CMP kinase activity dCMP kinase activity | Pyrobaculum aerophilum | ATP-binding Cytoplasm Kinase Nucleotide-binding Reference proteome Transferase | MVVIAVSGQP | MVVIAVSGQPGSGKTTIAREIARVLGLPLVSSGLLFREMAARMGMDFIEFHKYAETNPDIDKKVDSLAIERAKAGDVVLEGHLTAWIVRPYADVCIYLKASLETRARRVALRDGKSLQDALREVAEREELNRRRYLSIYGIDINDLSIFDLVLDTSHLSVNDAVRISLDYTCTSLSFKYSRKIC | phosphorylation pyrimidine nucleotide metabolic process cytoplasm ATP binding CMP kinase activity dCMP kinase activity Pyrobaculum aerophilum ATP-binding Cytoplasm Kinase Nucleotide-binding Reference proteome Transferase MVVIAVSGQP MVVIAVSGQPGSGKTTIAREIARVLGLPLVSSGLLFREMAARMGMDFIEFHKYAETNPDIDKKVDSLAIERAKAGDVVLEGHLTAWIV... |
translation | ribonucleoprotein complex; ribosome | structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MPRPAYRSRS | MPRPAYRSRSVRRIKVKTPGGRTVIHYEKRAKGVPKCPITGLPIGGMNKKVYRFGIKIRAPSRPYGGVYSHKVLARALRLAVRK | translation ribonucleoprotein complex; ribosome structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MPRPAYRSRS MPRPAYRSRSVRRIKVKTPGGRTVIHYEKRAKGVPKCPITGLPIGGMNKKVYRFGIKIRAPSRPYGGVYSHKVLARALRLAVRK |
glutaminyl-tRNAGln biosynthesis via transamidation translation | cytoplasm | aminoacyl-tRNA ligase activity ATP binding glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | Pyrobaculum aerophilum | ATP-binding Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MDYKALGLKT | MDYKALGLKTGLEIHIQLNTQRKLFCHCPPVLRDDEPHFRVERRLHISVSELGAVDPAVVWEVRKRRKYIYEGYRDTTCLVELDEEPPHLPDEEALVTAVAVAKMFNAKLFDEIYVMRKTVVDGSNVSGFQRTMLIAYGGRAKILGYDIGVETIALEEDAARKISEEGKAMVYRLDRLGIPLIEIATEPMAYTPQEVEEVAWIIGYSVKITGRAKRGVGTVRQDVNVSIAGGAKTEIKGVPDLSLIPKVIEYEAVRQVNLLKIAEELKRRGVGRVELSVADVTAAFANTKSRLVRKVLDSGGRVLALKTPGFQKLLGFEI... | glutaminyl-tRNAGln biosynthesis via transamidation translation cytoplasm aminoacyl-tRNA ligase activity ATP binding glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity Pyrobaculum aerophilum ATP-binding Ligase Nucleotide-binding Protein biosynthesis Reference proteome MDYKALGLKT MDYKALGLKTGLEIHIQLNTQRKLFCHCPPVLRD... |
rRNA methylation | cytoplasm | RNA binding rRNA (adenine-N6,N6-)-dimethyltransferase activity | Pyrobaculum aerophilum | Cytoplasm Methyltransferase Reference proteome RNA-binding rRNA processing S-adenosyl-L-methionine Transferase | MKRRRLAQHF | MKRRRLAQHFLRDPSVAEYIAGLVPSGLDVIEVGPGAGALTIPLAKRSKTVYAIEIDKALAERLRGIAPPNVVIIVGDALEVEWPRADFFVSNVPYSITSPLLFKLIRHRLPAVLTIQREVAERLVARPGSEDYGRLTVAVQCFYDVEILRVLPPYVFDPPPKVYSAVVRLMPKAPCVDNFDEFEKFSAWLFSARRKTLRRLKLADSTKRVYQLTLEELVELFKRHKA | rRNA methylation cytoplasm RNA binding rRNA (adenine-N6,N6-)-dimethyltransferase activity Pyrobaculum aerophilum Cytoplasm Methyltransferase Reference proteome RNA-binding rRNA processing S-adenosyl-L-methionine Transferase MKRRRLAQHF MKRRRLAQHFLRDPSVAEYIAGLVPSGLDVIEVGPGAGALTIPLAKRSKTVYAIEIDKALAERLRGIAPPNVVIIVGDALEVEWP... |
translation | cytosolic small ribosomal subunit | rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSSEQQKLRW | MSSEQQKLRWGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHDIIRPPSGRKGRRV | translation cytosolic small ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSSEQQKLRW MSSEQQKLRWGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIE... |
translation | cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MAKRGGKRTV | MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQRRPYRRPDGTWVAFEDNAVVIVTPEGDPKGSEIHGPVAMEATLRWPTIANLASIVV | translation cytosolic large ribosomal subunit large ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MAKRGGKRTV MAKRGGKRTVGVPYRFHVTPGIFMNSLVPVADNSGAKLVRVIGVVGHYSKTVHRRIPGAGVGDMVVVVVREGKPELRKQIFRAIVVRQ... |
de novo' NAD biosynthetic process from aspartate | cytoplasm | 4 iron, 4 sulfur cluster binding metal ion binding quinolinate synthetase A activity | Pyrobaculum aerophilum | 4Fe-4S Cytoplasm Iron Iron-sulfur Metal-binding Pyridine nucleotide biosynthesis Reference proteome Transferase | MLKEEVLRLK | MLKEEVLRLKREKNAVILAHNYQLPEVKDVADFIGDSLNLSMEAARTKADIIVFAGVYFMAETAAILNPDKKVLIPDPGAGCSLASSVSAADVLEWRRRHPNGVVVAYINTYAEVKAVSDYVCTSANCLKIIEAIPSDRPVLFLPDKYLGLYIKAKTGREIDIWDGECHVHAKITSPKITAKIKLYRDAEVLIHPECGCGTACLLELPKMGLSPKFLSTEGMVKYVKQSPARRFIIATEVGIIDRLEREAPGKEYIPAAEDAICEYMKLITLDKVHRSLKEEIYRVVVPEDIAKKARLAIERMFEFA | de novo' NAD biosynthetic process from aspartate cytoplasm 4 iron, 4 sulfur cluster binding metal ion binding quinolinate synthetase A activity Pyrobaculum aerophilum 4Fe-4S Cytoplasm Iron Iron-sulfur Metal-binding Pyridine nucleotide biosynthesis Reference proteome Transferase MLKEEVLRLK MLKEEVLRLKREKNAVILAHNYQLPEVKDV... |
cytoplasmic translation | cytosolic large ribosomal subunit | large ribosomal subunit rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MMLAIGKRRY | MMLAIGKRRYVRTRQYPARKVKIVSEATELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFTKVYGGIPAEIAEKVRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEPIFEQLRLLGVIWRGQRFVDISELIIDVNKYKELFETASVYARNLALNIVYPTREVLQAVIPAAHMRAVALAAKLGVVTRETLPALLSRAVAEANALAAVVAAKAPDLGISVSLPQTAAPQQTPQPTEAP... | cytoplasmic translation cytosolic large ribosomal subunit large ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MMLAIGKRRY MMLAIGKRRYVRTRQYPARKVKIVSEATELLQKYPYVFLFDLHGLSSRILHEYRYRLRRYGVIKIIKPTLFKIAFT... |
regulation of translation translation | large ribosomal subunit | rRNA binding structural constituent of ribosome tRNA binding | Pyrobaculum aerophilum | Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation tRNA-binding | MSAVINKETL | MSAVINKETLQAKIAEALKAGKPRRFKQSVELIVVLKGVDLSKPENRINLLVELPHPPKPNKIAAFAHGAFEVSAKNAGVDSIITRDQVEGLSGNKRAIRKLAKQYDFFIAPPDLMPLLGRVVGPIFGPRGKMPEVVPPNVDVKSVVERLRKAVRVRFRNEPVVKVRIGSEGQSPKEILENALVVLEEVNRKFPLRQYLKDLYFKKTMGPPVKVRAVEALVK | regulation of translation translation large ribosomal subunit rRNA binding structural constituent of ribosome tRNA binding Pyrobaculum aerophilum Reference proteome Repressor Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding Translation regulation tRNA-binding MSAVINKETL MSAVINKETLQAKIAEALKAGKPRRFKQSVELIVVLK... |
translation | large ribosomal subunit | large ribosomal subunit rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSKRVVTVPL | MSKRVVTVPLQGGKVAVNPQFQDALKQIGLDPNAVVQRVQEELKKVGKYPVQKVEVEVVSPSKYEVKIYLPPIGDLLLKLFGKDTGAHDARNEVIGNLSFAQLVEIALLKKDELKSKTLKSAVKQLLSTCKAMGVTVDGRKAEEVLRDVDGGKYDEIINKFEKQWQQ | translation large ribosomal subunit large ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSKRVVTVPL MSKRVVTVPLQGGKVAVNPQFQDALKQIGLDPNAVVQRVQEELKKVGKYPVQKVEVEVVSPSKYEVKIYLPPIGDLLLKLFGKDTGAHDARNEVIGNL... |
protein folding | cytoplasm; prefoldin complex | unfolded protein binding | Pyrobaculum aerophilum | Chaperone Cytoplasm Reference proteome | MSRQDVQRLL | MSRQDVQRLLEEYQLIGELLSSLQAQHATVAELLEELTTALDGVRLLKGEGGERLVHIGAGLFVKGVFEAKEVLAPLGAGYHAFLDLNNAERILQERIEEYSKLKTSLEENIEKLAERAAQIRQALERLGIR | protein folding cytoplasm; prefoldin complex unfolded protein binding Pyrobaculum aerophilum Chaperone Cytoplasm Reference proteome MSRQDVQRLL MSRQDVQRLLEEYQLIGELLSSLQAQHATVAELLEELTTALDGVRLLKGEGGERLVHIGAGLFVKGVFEAKEVLAPLGAGYHAFLDLNNAERILQERIEEYSKLKTSLEENIEKLAERAAQIRQALERLGIR |
translation | ribonucleoprotein complex; ribosome | large ribosomal subunit rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MPRIYKVIGE | MPRIYKVIGETTTGMKFKLEVLGEKPYDAIEKAYSLIGSRHKLSRTQIRIKDVVVISPEDASSEEVKLLMSIDKVIKY | translation ribonucleoprotein complex; ribosome large ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MPRIYKVIGE MPRIYKVIGETTTGMKFKLEVLGEKPYDAIEKAYSLIGSRHKLSRTQIRIKDVVVISPEDASSEEVKLLMSIDKVIKY |
assembly of large subunit precursor of preribosome cytosolic ribosome assembly maturation of 5.8S rRNA maturation of LSU-rRNA | cytosol; preribosome, large subunit precursor | ribosomal large subunit binding translation initiation factor activity | Pyrobaculum aerophilum | Initiation factor Protein biosynthesis Reference proteome | MFDITPIRVF | MFDITPIRVFGTSSIGVFIATNNTVTFIPPDVPEKIDDAVRNTLRTSVARFTVARSPLLGIFTVVNDNGVLLPPLVLEEEVRLFKALGLNVDIINTKYTAISNLILAGNKVALVSPLLEPSARKVVADVLGVEVIVDTIAGNPLVGALAVLNSRGLLVAPEATDDDLKKLSEYFKVRVDVGTVNRGKSFLRGGIVVNDNGALVGDETAGPELMRMQQVLG | assembly of large subunit precursor of preribosome cytosolic ribosome assembly maturation of 5.8S rRNA maturation of LSU-rRNA cytosol; preribosome, large subunit precursor ribosomal large subunit binding translation initiation factor activity Pyrobaculum aerophilum Initiation factor Protein biosynthesis Reference prote... |
cytoplasmic translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MSEEKKVVLS | MSEEKKVVLSREYVINLRRAYEVSRTKRAKYAVGLIRRFVARHLKVEPKAVKIGQLLNTALWARSIEKPPRKVRVAVEKYSDGTVKVELKE | cytoplasmic translation cytosolic large ribosomal subunit structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MSEEKKVVLS MSEEKKVVLSREYVINLRRAYEVSRTKRAKYAVGLIRRFVARHLKVEPKAVKIGQLLNTALWARSIEKPPRKVRVAVEKYSDGTVKVELKE |
tryptophanyl-tRNA aminoacylation | cytoplasm | ATP binding tryptophan-tRNA ligase activity | Pyrobaculum aerophilum | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MEEEFVVTPW | MEEEFVVTPWEVRGRVDYEKLLKHFGAKPLTKDEVALLEKYAGEVHPLIRRGFFYAHRDFDFIMKWHGEGRPWALYTGRGPSGPVHIGHMVPWILLKWFSDKFGLEVYFQITDDEKFYDDPEMKLEEATNWAYENALDVIALGFSPERLHLIIDTKDIKPLYPIAVRVAKKLTWNTVKATFGFTDSTNIGLIFYPSLQIAVAFLPTELRREATPVLIPCAIDQDPYFRLARDIADALGYPKPSTLYSKFIMALTGESKMSASNPDSAIYTLDDEKTVRRKVMNAFTGGRPTAEEQRKYGGNPEVCPVFHYHMLFDPDDAS... | tryptophanyl-tRNA aminoacylation cytoplasm ATP binding tryptophan-tRNA ligase activity Pyrobaculum aerophilum Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MEEEFVVTPW MEEEFVVTPWEVRGRVDYEKLLKHFGAKPLTKDEVALLEKYAGEVHPLIRRGFFYAHRDFDFIMKWHGEGRPWALYTGRGPSGPV... |
translation | cytosol; small ribosomal subunit | rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MSQEIRAIVR | MSQEIRAIVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAVRNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVRGQRTVTTGRFGATAGVTKKKAAAGK | translation cytosol; small ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MSQEIRAIVR MSQEIRAIVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAVRNLHELAPAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLK... |
ribosomal small subunit biogenesis translation | small ribosomal subunit | rRNA binding structural constituent of ribosome | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding | MGGLKKPKKK | MGGLKKPKKKYLAGKPKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEMPFKEKLYKMGFIEDPNVQLDRILSLDVRAILERRLQTIVYRMGLAKSIHHARQLIVHGHVAVAGRRVTSPGFLVPRELEDKISLIQ | ribosomal small subunit biogenesis translation small ribosomal subunit rRNA binding structural constituent of ribosome Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein RNA-binding rRNA-binding MGGLKKPKKK MGGLKKPKKKYLAGKPKKIWNKQLLLEELQLMGEYGLRNKKELWLARARLKWITRRARSLLSMTAEERAPLEMPFKEKLYKMGFIED... |
translation | cytosolic large ribosomal subunit | structural constituent of ribosome | Pyrobaculum aerophilum | 3D-structure Reference proteome Ribonucleoprotein Ribosomal protein | MARNKPLGKK | MARNKPLGKKLRLAAAFKXNRNPPVWVVVKTKRRVTRSPARRHWRRVKLKA | translation cytosolic large ribosomal subunit structural constituent of ribosome Pyrobaculum aerophilum 3D-structure Reference proteome Ribonucleoprotein Ribosomal protein MARNKPLGKK MARNKPLGKKLRLAAAFKXNRNPPVWVVVKTKRRVTRSPARRHWRRVKLKA |
DNA replication, synthesis of RNA primer | DNA-directed RNA polymerase complex; primosome complex | DNA primase activity metal ion binding | Pyrobaculum aerophilum | DNA replication DNA-directed RNA polymerase Magnesium Manganese Metal-binding Nucleotidyltransferase Primosome Reference proteome Transcription Transferase | MIVEVFFRNF | MIVEVFFRNFYRNFAKFEIDAVDKREFAFQPFSGGMVRHKSFKSLEDLRKFVVEKTPRHIYHSAAYYERPGEEDMERKGWIGADLIFDIDGDHLDTEACRESKIVSLRCLEDAREEANKLIDVLIQELDLKPTRIVFSGNRGFHIHVSSEEVMKLGSRERRELVNYLKAVGFDPSRFIAKLGRRKVVLYEEEAVGNLLRIKQGVEDARAMKVEIDEVVTQDIHRLIRAPGSLNGKTGLVALPISLKELDKGVEYIVDKAIAFRKGHLKFKFEKPVEGPVLFEKVGGREGDVKVLPAYVAIYLELQEFGKIYD | DNA replication, synthesis of RNA primer DNA-directed RNA polymerase complex; primosome complex DNA primase activity metal ion binding Pyrobaculum aerophilum DNA replication DNA-directed RNA polymerase Magnesium Manganese Metal-binding Nucleotidyltransferase Primosome Reference proteome Transcription Transferase MIVEVF... |
ribosomal small subunit assembly translation | cytosolic small ribosomal subunit | RNA binding structural constituent of ribosome zinc ion binding | Pyrobaculum aerophilum | Metal-binding Reference proteome Ribonucleoprotein Ribosomal protein Zinc Zinc-finger | MPVRFSKVLI | MPVRFSKVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKLAGHVVKVLE | ribosomal small subunit assembly translation cytosolic small ribosomal subunit RNA binding structural constituent of ribosome zinc ion binding Pyrobaculum aerophilum Metal-binding Reference proteome Ribonucleoprotein Ribosomal protein Zinc Zinc-finger MPVRFSKVLI MPVRFSKVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAK... |
pseudouridine synthesis rRNA processing | ribonucleoprotein complex | snoRNA binding | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosome biogenesis rRNA processing | MKSLLRRCVN | MKSLLRRCVNCGEYTLSKDKCPRCGGAVRVPHPPKFSPEDKYQKYRILQKLLMGKLPIRDETKERLLRDLTS | pseudouridine synthesis rRNA processing ribonucleoprotein complex snoRNA binding Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosome biogenesis rRNA processing MKSLLRRCVN MKSLLRRCVNCGEYTLSKDKCPRCGGAVRVPHPPKFSPEDKYQKYRILQKLLMGKLPIRDETKERLLRDLTS |
amide biosynthetic process glutamyl-tRNA aminoacylation | cytosol | ATP binding glutamate-tRNA ligase activity | Pyrobaculum aerophilum | Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome | MNVEEIAFKY | MNVEEIAFKYALANAVKYGGKADVKAVMAKLMAEVPELRARAREVKQIVDAVVARVNSMPLEEQRRILRERWPELLEERRAEQRRPGLEGLPELPNVRGGVVVRFAPNPDFVLHLGSARPAILNYAYRIKYGGKFILRFEDTDPRIKSPLVTEEVNAYESIREDLRWLGVRWDEEYIQSQRMEIYYEHAKKLLEMGAAYVDLCKPEEWRRLRNEKKACPHREQPPEVNLELWDKMLEGRFKEGEAVLRIKTDLTHPDPSVRDWVAFRIIDTSKTPHPLTGDKYIVWPTYNFAVSIDDHLMGVTHVLRAQEHSVNTIKQSY... | amide biosynthetic process glutamyl-tRNA aminoacylation cytosol ATP binding glutamate-tRNA ligase activity Pyrobaculum aerophilum Aminoacyl-tRNA synthetase ATP-binding Cytoplasm Ligase Nucleotide-binding Protein biosynthesis Reference proteome MNVEEIAFKY MNVEEIAFKYALANAVKYGGKADVKAVMAKLMAEVPELRARAREVKQIVDAVVARVNSMPLEEQR... |
translation | cytosolic small ribosomal subunit | structural constituent of ribosome tRNA binding | Pyrobaculum aerophilum | Reference proteome Ribonucleoprotein Ribosomal protein | MSLASRRKVR | MSLASRRKVRIRLYGTNPADVEQVAREIVDLAKKMGVQVRGPIPLPTRRLIVTVRRAPSGQGYHTFDHWEMRISKRLIDIEASERVLRRLMTIRVPDTVKIELQLI | translation cytosolic small ribosomal subunit structural constituent of ribosome tRNA binding Pyrobaculum aerophilum Reference proteome Ribonucleoprotein Ribosomal protein MSLASRRKVR MSLASRRKVRIRLYGTNPADVEQVAREIVDLAKKMGVQVRGPIPLPTRRLIVTVRRAPSGQGYHTFDHWEMRISKRLIDIEASERVLRRLMTIRVPDTVKIELQLI |
arginine biosynthetic process via ornithine | cytosol | argininosuccinate lyase activity | Pyrobaculum aerophilum | Amino-acid biosynthesis Arginine biosynthesis Cytoplasm Lyase Reference proteome | MSFYRSWIGG | MSFYRSWIGGTGDLVKKYTSSIKDDVELAEEVVRVMKGHVAHLVEIGSIPKEAGERIIKALEEVDASELLKEEFEDVHEALEKWLIDKLGEEIGGWVGLGRSRNDHVAAAIRLAALRKTERLKEEACRLRCALAKRALEYADCPMPSFTHFQPAQVITFGHYLLAIDELLAEFLHILRGVEDLLNRSPLGAGPAGGVRTPLDRRRLAELVGFKEVVENALYASGSRFFALALASAVVSFLAELSRAVDDFIRWNSPVVGYVNSPDSHVSTSSIMPHKRNLVTLEVLRARIAEALGHFAAMSALVMKVGMGYSLDLQEATR... | arginine biosynthetic process via ornithine cytosol argininosuccinate lyase activity Pyrobaculum aerophilum Amino-acid biosynthesis Arginine biosynthesis Cytoplasm Lyase Reference proteome MSFYRSWIGG MSFYRSWIGGTGDLVKKYTSSIKDDVELAEEVVRVMKGHVAHLVEIGSIPKEAGERIIKALEEVDASELLKEEFEDVHEALEKWLIDKLGEEIGGWVGLGRSRNDHVAAAIRLAALRKTE... |
tryptophan biosynthetic process | cytosol | anthranilate phosphoribosyltransferase activity magnesium ion binding | Pyrobaculum aerophilum | Amino-acid biosynthesis Aromatic amino acid biosynthesis Glycosyltransferase Magnesium Metal-binding Reference proteome Transferase Tryptophan biosynthesis | MDLRALLRKL | MDLRALLRKLGHGQSLNADEAYILGKGILTGTLSEVEIAASLTAMKVRGETAEEVAGFVKMAREFAVRVPLTVEAIDTAGTGGDGAGTINLSTAAAIVAAAAGAKVLKHGNRSASGMFGSADFMEAVGYNLEIGPERAARLVEEVGFAFVFAPKYHPAFARVAPVRRQLPFRTVFNIVGPLANPGLVKRQLIGVAETRLLDVISEAAARLGFEHAVVVHGSGVDEVTTEGETVVYEVRKGAAERYTISPGDLGAPRVPLPRASSKEEAVAKALAGLRGELLEASIAIAVNAAFALYVAGVVKDVKDGYELAINTIREGAA... | tryptophan biosynthetic process cytosol anthranilate phosphoribosyltransferase activity magnesium ion binding Pyrobaculum aerophilum Amino-acid biosynthesis Aromatic amino acid biosynthesis Glycosyltransferase Magnesium Metal-binding Reference proteome Transferase Tryptophan biosynthesis MDLRALLRKL MDLRALLRKLGHGQSLNADE... |
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