Jumbol commited on
Commit
a8b0267
·
verified ·
1 Parent(s): b4fd0ff

Upload 2 files

Browse files
double_similar/foldseek_out_file_rm_konwn_acr.csv ADDED
@@ -0,0 +1,13 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ query,target,inhibition_type_probability,alntmscore,qtmscore,ttmscore,lddt,Acr_Type,seq
2
+ WP_057390551.1_NZ_LJNU01000002_Pseudomonas_aeruginosa_AcrsI-F_Region_81761_138319,anti_CRISPR0490_WP_038819808.1_AcrIF11_I-F_Pseudomonas_aeruginosa_Verified,1.0,1.001,0.9933,0.9933,0.982,AcrIF11,MSMELFHGSYEEISEIRDSGIFGGLFGAHEKETALSHGETLHRIISPLPLTDYALNYEIESAWEVALDVAGGDENVAEAIMAKACESDSNDGWELQRLRGVLAVRLGYTSVEMEDEHGTTWLCLPGCTVEKI
3
+ WP_411756513.1_NZ_MRZL01000003_Staphylococcus_simulans_AcrsII-A_Region_173499_222267,anti_CRISPR3629_AcrIIA14_AcrIIA14_II-A_nan_Verified,1.0,0.9659,0.96,0.96,0.909,AcrIIA14,MKKTIEKLLNSDLNSNYIAKKTGVEQSTIYRLRTGERQLGKLGLDSAERLYNYQKEIENMKSVKYISNMSKQEKGYRVYVNVVNEDTDKGFLFPSVPKEVIENDKIDELFNFEHHKPYVQKAKSRYDKNGIGYKIVQLDEGFQKFIELNKEKMKENLDY
4
+ ATM37883.1_CP023913_Klebsiella_pneumoniae_AcrsI-E_Region_2853403_2908376,anti_CRISPR3644_WP_038434996.1_AcrIE8.1_I-E_Klebsiella_pneumoniae_Verified,1.0,0.7248,0.7135,0.7135,0.9024,AcrIE8.1,MTTITINTYDPEARFNMDKDEAKSFFEFVEKKATDAGFNVQYDSCNYVDEESERFVEKCFEDY
5
+ WP_108234913.1_NZ_QASO01000129_Pseudomonas_indoloxydans_AcrsI-F_Region_13914_53817,anti_CRISPR3678_WP_101192668.1_AcrIE9_I-E_Pseudomonas_pharmafabricae_Verified,1.0,0.869,0.8588,0.8588,0.7522,AcrIE9,MELKINSRKLGRTITFSRPGSSYIFADLNGKSGTLGCQICSGGGTMGSTLSYDGDDQAQFEAICRRWYRAHVRGE
6
+ PBX41287.1_NRAK01000011_Pseudomonas_aeruginosa_AcrsI-E_Region_104651_146442,anti_CRISPR0409_YP_007392439.1_AcrIE2_I-E_Pseudomonas_phage_JBD88a_Verified,1.0,0.9345,0.7983,0.924,0.8619,AcrIE2,MPATTARRAQGNDQMNTYLIDPRKNNDNSGERFTVDAVDITAAAKSAAQQILGEEFEGLVYRETGESNGSGMFQAYHHLHGTNRTETTVGYPFHVMEL
7
+ PCZ07134.1_NXQL01000002_Listeria_monocytogenes_AcrsI-B_Region_65161_107328,anti_CRISPR3641_WP_003731276.1_AcrIIA12_II-A_Listeria_monocytogenes_Verified,1.0,0.9218,0.9113,0.9113,0.8868,AcrIIA12,MSKTMYKNDVIELIKNAKTNNEELLFTSVERNTREAATQYFRCPEKHVSDAGVYYGEDFEFDGFEIFEDDLIYTRSYDKEELN
8
+ WP_108234914.1_NZ_QASO01000129_Pseudomonas_indoloxydans_AcrsI-F_Region_13914_53817,anti_CRISPR3674_WP_080050315.1_AcrIC6_I-C_Pseudomonas_sp._S-6-2_Verified,1.0,0.8767,0.8712,0.8712,0.939,AcrIC6,MTDSLIHLRIPAATKGRWVRASRAAGQRLSDYITNAVEAYMQQQLTRLAIPDDLTFSDLRLARDADGAVSFDWAVIERICRANNLPVELLREGPEDNVAGLLIGWYSAHRNAGGAPDPVAEDLLAEVQAEDAAGQAFSYEPGRA
9
+ ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666,anti_CRISPR0003_YP_007392440.1_AcrIF3_I-F_Pseudomonas_phage_JBD88a_Verified,1.0,0.9715,0.9647,0.9647,0.9256,AcrIF3,MSSTISDRIISRSVIEAARFIQSWEDADPDNLTESQVLAASSFAARLHEGFQATVLQRLVDDSNHEEYREFKAWEEALLNADGRVASNPFADWGWWYRIANVMLATASQNIGVAWGSHVHGRLMAIFQDRFQQHYEDEEC
10
+ WP_016071148.1_NZ_AYPR01000009_Rhodobacter_capsulatus_DE442_AcrsI-C_Region_84146_145066,anti_CRISPR3679_ETD02882.1_AcrIC9_I-C_Rhodobacter_capsulatus_DE442_Verified,1.0,1.009,0.9955,0.9453,0.9944,AcrIC9,MTSFYKITAYNSQALYFWGTDADVDRYVDWLNRDREINVYAAEAIPEAEWAQYEGRDDVLSGEECGWDDFMSAEA
11
+ WP_103182539.1_NZ_MTAH01000019_Pectobacterium_odoriferum_AcrsI-F_Region_67_49224,anti_CRISPR0499_EGE18857.1_AcrIF11_I-F_Moraxella_catarrhalis_BC8_Verified,1.0,0.9064,0.8724,0.8512,0.7876,AcrIF11,MKLFHGSYSNVAPVIKVGAFAMSGDNVFDGIFASADFDAADSHGNFVHSYNVENIADSSDLNARIDEVISFLSSEIEADVDTIEEIANAITDDECDDSFAEFLSPRSATEDAGWEMQRLRGRVAAHLGFDAVEMDDEHGTSYLIVNPAIIAE
12
+ PBF40835.1_MOQV01000039_Clostridioides_difficile_AcrsI-B_Region_2280_37398,new_20_WP_009894340_AcrIB2_Clostridioides,1.0,0.8255,0.821,0.821,0.8124,AcrIB2,MNKQKARRFLRVIDMNMDKIEEEAIKAFKESCLIKEENDIKIFIDFQGKVEAIAIQAYTKLLDDNKEINIFTSRQIENNLDDMFGEICYVNDYEEFVNWCEDKCENLNWDSYKKFNKENFEEIAERNIDDSTPVFLEELREGIESCKQELQNIVEN
13
+ KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159,anti_CRISPR0004_YP_007392739.1_AcrIF3_I-F_Pseudomonas_phage_JBD5_Verified,1.0,0.9264,0.9201,0.9201,0.8796,AcrIF3,MSSTISDRIVAHSVIDAARFIQSWEDADPDNLTESQVLAAAGFAARLHEGFQATVLQRLVDESNHEEYREFKAWEEALLNADGRVASSPFADWGWWYRIANVMLATASQNVGVTWGSRVHGRLMAIFQDKFKQRYEEQA
double_similar/foldseek_out_file_rm_konwn_acr.fasta ADDED
@@ -0,0 +1,37 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ >WP_057390551.1_NZ_LJNU01000002_Pseudomonas_aeruginosa_AcrsI-F_Region_81761_138319
2
+ MSMELFHGSYEEISEIRDSGIFGGLFGAHEKETALSHGETLHRIISPLPLTDYALNYEIE
3
+ SAWEVALDVAGGDENVAEAIMAKACESDSNDGWELQRLRGVLAVRLGYTSVEMEDEHGTT
4
+ WLCLPGCTVEKI
5
+ >WP_411756513.1_NZ_MRZL01000003_Staphylococcus_simulans_AcrsII-A_Region_173499_222267
6
+ MKKTIEKLLNSDLNSNYIAKKTGVEQSTIYRLRTGERQLGKLGLDSAERLYNYQKEIENM
7
+ KSVKYISNMSKQEKGYRVYVNVVNEDTDKGFLFPSVPKEVIENDKIDELFNFEHHKPYVQ
8
+ KAKSRYDKNGIGYKIVQLDEGFQKFIELNKEKMKENLDY
9
+ >ATM37883.1_CP023913_Klebsiella_pneumoniae_AcrsI-E_Region_2853403_2908376
10
+ MTTITINTYDPEARFNMDKDEAKSFFEFVEKKATDAGFNVQYDSCNYVDEESERFVEKCF
11
+ EDY
12
+ >WP_108234913.1_NZ_QASO01000129_Pseudomonas_indoloxydans_AcrsI-F_Region_13914_53817
13
+ MELKINSRKLGRTITFSRPGSSYIFADLNGKSGTLGCQICSGGGTMGSTLSYDGDDQAQF
14
+ EAICRRWYRAHVRGE
15
+ >PBX41287.1_NRAK01000011_Pseudomonas_aeruginosa_AcrsI-E_Region_104651_146442
16
+ MPATTARRAQGNDQMNTYLIDPRKNNDNSGERFTVDAVDITAAAKSAAQQILGEEFEGLV
17
+ YRETGESNGSGMFQAYHHLHGTNRTETTVGYPFHVMEL
18
+ >WP_108234914.1_NZ_QASO01000129_Pseudomonas_indoloxydans_AcrsI-F_Region_13914_53817
19
+ MTDSLIHLRIPAATKGRWVRASRAAGQRLSDYITNAVEAYMQQQLTRLAIPDDLTFSDLR
20
+ LARDADGAVSFDWAVIERICRANNLPVELLREGPEDNVAGLLIGWYSAHRNAGGAPDPVA
21
+ EDLLAEVQAEDAAGQAFSYEPGRA
22
+ >ESR95706.1_AYNE01000071_Pseudomonas_aeruginosa_DHS01_AcrsI-E_Region_50017_79666
23
+ MSSTISDRIISRSVIEAARFIQSWEDADPDNLTESQVLAASSFAARLHEGFQATVLQRLV
24
+ DDSNHEEYREFKAWEEALLNADGRVASNPFADWGWWYRIANVMLATASQNIGVAWGSHVH
25
+ GRLMAIFQDRFQQHYEDEEC
26
+ >WP_103182539.1_NZ_MTAH01000019_Pectobacterium_odoriferum_AcrsI-F_Region_67_49224
27
+ MKLFHGSYSNVAPVIKVGAFAMSGDNVFDGIFASADFDAADSHGNFVHSYNVENIADSSD
28
+ LNARIDEVISFLSSEIEADVDTIEEIANAITDDECDDSFAEFLSPRSATEDAGWEMQRLR
29
+ GRVAAHLGFDAVEMDDEHGTSYLIVNPAIIAE
30
+ >PBF40835.1_MOQV01000039_Clostridioides_difficile_AcrsI-B_Region_2280_37398
31
+ MNKQKARRFLRVIDMNMDKIEEEAIKAFKESCLIKEENDIKIFIDFQGKVEAIAIQAYTK
32
+ LLDDNKEINIFTSRQIENNLDDMFGEICYVNDYEEFVNWCEDKCENLNWDSYKKFNKENF
33
+ EEIAERNIDDSTPVFLEELREGIESCKQELQNIVEN
34
+ >KTK51907.1_LORM01000001_Pseudomonas_aeruginosa_AcrsI-F_Region_817837_857159
35
+ MSSTISDRIVAHSVIDAARFIQSWEDADPDNLTESQVLAAAGFAARLHEGFQATVLQRLV
36
+ DESNHEEYREFKAWEEALLNADGRVASSPFADWGWWYRIANVMLATASQNVGVTWGSRVH
37
+ GRLMAIFQDKFKQRYEEQA