idx int64 0 165k | question stringlengths 73 4.15k | target stringlengths 5 918 | len_question int64 21 890 | len_target int64 3 255 |
|---|---|---|---|---|
4,900 | private AdvancedModelWrapper updateEOByUpdatedModel ( EDBModelObject reference , AdvancedModelWrapper model , Map < Object , AdvancedModelWrapper > updated ) { ModelDescription source = model . getModelDescription ( ) ; ModelDescription description = reference . getModelDescription ( ) ; AdvancedModelWrapper wrapper = updated . get ( reference . getOID ( ) ) ; Object ref = null ; if ( wrapper == null ) { ref = reference . getCorrespondingModel ( ) ; } else { ref = wrapper . getUnderlyingModel ( ) ; } Object transformResult = transformationEngine . performTransformation ( source , description , model . getUnderlyingModel ( ) , ref ) ; return AdvancedModelWrapper . wrap ( transformResult ) ; } | Updates an Engineering Object given as EDBObject based on the update on the given model which is referenced by the given Engineering Object . | 157 | 27 |
4,901 | private void enhanceCommitInserts ( EKBCommit commit ) throws EKBException { for ( OpenEngSBModel model : commit . getInserts ( ) ) { AdvancedModelWrapper simple = AdvancedModelWrapper . wrap ( model ) ; if ( simple . isEngineeringObject ( ) ) { performInsertEOLogic ( simple . toEngineeringObject ( ) ) ; } } } | Enhances the EKBCommit for the insertion of EngineeringObjects . | 85 | 16 |
4,902 | private void performInsertEOLogic ( EngineeringObjectModelWrapper model ) { for ( Field field : model . getForeignKeyFields ( ) ) { mergeEngineeringObjectWithReferencedModel ( field , model ) ; } } | Performs the logic for the enhancement needed to be performed to insert an Engineering Object into the EDB . | 50 | 21 |
4,903 | private AdvancedModelWrapper performMerge ( AdvancedModelWrapper source , AdvancedModelWrapper target ) { if ( source == null || target == null ) { return null ; } ModelDescription sourceDesc = source . getModelDescription ( ) ; ModelDescription targetDesc = target . getModelDescription ( ) ; Object transformResult = transformationEngine . performTransformation ( sourceDesc , targetDesc , source . getUnderlyingModel ( ) , target . getUnderlyingModel ( ) ) ; AdvancedModelWrapper wrapper = AdvancedModelWrapper . wrap ( transformResult ) ; wrapper . removeOpenEngSBModelEntry ( EDBConstants . MODEL_VERSION ) ; return wrapper ; } | Performs the merge from the source model to the target model and returns the result . Returns null if either the source or the target is null . | 141 | 29 |
4,904 | private void mergeEngineeringObjectWithReferencedModel ( Field field , EngineeringObjectModelWrapper model ) { AdvancedModelWrapper result = performMerge ( loadReferencedModel ( model , field ) , model ) ; if ( result != null ) { model = result . toEngineeringObject ( ) ; } } | Merges the given EngineeringObject with the referenced model which is defined in the given field . | 67 | 18 |
4,905 | public static < T > T createModel ( Class < T > model , List < OpenEngSBModelEntry > entries ) { if ( ! ModelWrapper . isModel ( model ) ) { throw new IllegalArgumentException ( "The given class is no model" ) ; } try { T instance = model . newInstance ( ) ; for ( OpenEngSBModelEntry entry : entries ) { if ( tryToSetValueThroughField ( entry , instance ) ) { continue ; } if ( tryToSetValueThroughSetter ( entry , instance ) ) { continue ; } ( ( OpenEngSBModel ) instance ) . addOpenEngSBModelEntry ( entry ) ; } return instance ; } catch ( InstantiationException e ) { LOGGER . error ( "InstantiationException while creating a new model instance." , e ) ; } catch ( IllegalAccessException e ) { LOGGER . error ( "IllegalAccessException while creating a new model instance." , e ) ; } catch ( SecurityException e ) { LOGGER . error ( "SecurityException while creating a new model instance." , e ) ; } return null ; } | Creates a model of the given type and uses the list of OpenEngSBModelEntries as initialization data . | 234 | 23 |
4,906 | private static boolean tryToSetValueThroughField ( OpenEngSBModelEntry entry , Object instance ) throws IllegalAccessException { try { Field field = instance . getClass ( ) . getDeclaredField ( entry . getKey ( ) ) ; field . setAccessible ( true ) ; field . set ( instance , entry . getValue ( ) ) ; field . setAccessible ( false ) ; return true ; } catch ( NoSuchFieldException e ) { // if no field with this name exist, try to use the corresponding setter } catch ( SecurityException e ) { // if a security manager is installed which don't allow this change of a field value, try // to use the corresponding setter } return false ; } | Tries to set the value of an OpenEngSBModelEntry to its corresponding field of the model . Returns true if the field can be set returns false if not . | 150 | 34 |
4,907 | private static boolean tryToSetValueThroughSetter ( OpenEngSBModelEntry entry , Object instance ) throws IllegalAccessException { try { String setterName = getSetterName ( entry . getKey ( ) ) ; Method method = instance . getClass ( ) . getMethod ( setterName , entry . getType ( ) ) ; method . invoke ( instance , entry . getValue ( ) ) ; return true ; } catch ( NoSuchMethodException e ) { // if there exist no such method, then it is an entry meant for the model tail } catch ( IllegalArgumentException e ) { LOGGER . error ( "IllegalArgumentException while trying to set values for the new model." , e ) ; } catch ( InvocationTargetException e ) { LOGGER . error ( "InvocationTargetException while trying to set values for the new model." , e ) ; } return false ; } | Tries to set the value of an OpenEngSBModelEntry to its corresponding setter of the model . Returns true if the setter can be called returns false if not . | 190 | 36 |
4,908 | public static DestinationUrl createDestinationUrl ( String destination ) { String [ ] split = splitDestination ( destination ) ; String host = split [ 0 ] . trim ( ) ; String jmsDestination = split [ 1 ] . trim ( ) ; return new DestinationUrl ( host , jmsDestination ) ; } | Creates an instance of an connection URL based on an destination string . In case that the destination string does not match the form HOST?QUEUE||TOPIC an IllegalArgumentException is thrown . | 66 | 42 |
4,909 | public static < K , V > Map < K , List < V > > group ( Collection < V > collection , Function < V , K > keyFn ) { Map < K , List < V > > map = new HashMap <> ( ) ; for ( V value : collection ) { K key = keyFn . apply ( value ) ; if ( map . get ( key ) == null ) { map . put ( key , new ArrayList < V > ( ) ) ; } map . get ( key ) . add ( value ) ; } return map ; } | Does a group by or map aggregation on a collection based on keys that are emitted by the given function . For each key emitted by the function the map will contain a list at that key entry containing at least one element from the collection . | 120 | 47 |
4,910 | public < T > JdbcIndex < T > buildIndex ( Class < T > model ) { JdbcIndex < T > index = new JdbcIndex <> ( ) ; index . setModelClass ( model ) ; index . setName ( indexNameTranslator . translate ( model ) ) ; index . setFields ( buildFields ( index ) ) ; return index ; } | Builds a JdbcIndex instance for the given model Class . | 83 | 14 |
4,911 | public static String extractAttributeValueNoEmptyCheck ( Entry entry , String attributeType ) { Attribute attribute = entry . get ( attributeType ) ; if ( attribute == null ) { return null ; } try { return attribute . getString ( ) ; } catch ( LdapInvalidAttributeValueException e ) { throw new LdapRuntimeException ( e ) ; } } | Returns the value of the attribute of attributeType from entry . | 77 | 12 |
4,912 | public void removeSimilarClassesFromFile1 ( ) throws IOException { logging . info ( "Start reding cs File" ) ; List < String > linescs1 = getFileLinesAsList ( csFile1 ) ; logging . info ( "Start reding cs File" ) ; List < String > linescs2 = getFileLinesAsList ( csFile2 ) ; logging . info ( "Search classes" ) ; List < String > classNames1 = searchClasses ( linescs1 ) ; logging . info ( "Found " + classNames1 . size ( ) + " classes" ) ; logging . info ( "Search classes" ) ; List < String > classNames2 = searchClasses ( linescs2 ) ; logging . info ( "Found " + classNames2 . size ( ) + " classes" ) ; logging . info ( "Removing similarities from the file" ) ; for ( String name : findSimilarClassNames ( classNames1 , classNames2 ) ) { linescs1 = removeLinesContainingClassname ( linescs1 , name ) ; } logging . info ( "Remove Attributes, which stands alone" ) ; linescs1 = removeAttributesNotBoundToClass ( linescs1 ) ; if ( ! windows ) { logging . info ( "Replace abstract classes with interfaces" ) ; linescs1 = replaceAbstractClasses ( linescs1 ) ; linescs2 = replaceAbstractClasses ( linescs2 ) ; logging . info ( "Save files" ) ; } replaceFilesWithNewContent ( linescs1 , csFile1 ) ; replaceFilesWithNewContent ( linescs2 , csFile2 ) ; } | Removes similar classes in the first cs File | 351 | 9 |
4,913 | public List < String > replaceAbstractClasses ( List < String > lines ) { List < String > result = new LinkedList < String > ( ) ; for ( int i = 0 ; i < lines . size ( ) ; i ++ ) { result . add ( removeAbstract ( lines . get ( i ) ) ) ; } return result ; } | Searches for abstract classes and replace it by an interface . | 73 | 13 |
4,914 | private String getClassName ( String line ) { String result = line . substring ( line . indexOf ( CSHARP_CLASS_NAME ) + CSHARP_CLASS_NAME . length ( ) ) ; if ( result . contains ( "{" ) ) { result = result . substring ( 0 , result . indexOf ( "{" ) ) ; } if ( result . contains ( ":" ) ) { result = result . substring ( 0 , result . indexOf ( ":" ) ) ; } return result . replaceAll ( "\\s" , "" ) ; } | Returns the Class name of a line | 122 | 7 |
4,915 | public List < String > getFileLinesAsList ( File f ) throws IOException { BufferedReader br = new BufferedReader ( new InputStreamReader ( new DataInputStream ( new FileInputStream ( f ) ) ) ) ; List < String > result = new LinkedList < String > ( ) ; String strLine ; while ( ( strLine = br . readLine ( ) ) != null ) { result . add ( strLine ) ; } br . close ( ) ; return result ; } | Reads a file and returns the content as List | 106 | 10 |
4,916 | public static void removeSimilaritiesAndSaveFiles ( List < String > filepathes , Log logging , Boolean isWindows ) throws IOException { List < File > files = new LinkedList < File > ( ) ; for ( String path : filepathes ) { files . add ( new File ( path ) ) ; } FileComparer fcomparer ; for ( int i = 0 ; i < files . size ( ) ; i ++ ) { for ( int y = i + 1 ; y < files . size ( ) ; y ++ ) { fcomparer = new FileComparer ( files . get ( i ) , files . get ( y ) , logging , isWindows ) ; fcomparer . removeSimilarClassesFromFile1 ( ) ; } } } | Removes all the similar parts from all the files | 160 | 10 |
4,917 | public static Filter getFilterForLocation ( Class < ? > clazz , String location , String context ) throws IllegalArgumentException { String filter = makeLocationFilterString ( location , context ) ; return FilterUtils . makeFilter ( clazz , filter ) ; } | returns a filter that matches services with the given class and location in both the given context and the root - context | 55 | 23 |
4,918 | public static Filter getFilterForLocation ( Class < ? > clazz , String location ) throws IllegalArgumentException { return getFilterForLocation ( clazz , location , ContextHolder . get ( ) . getCurrentContextId ( ) ) ; } | returns a filter that matches services with the given class and location in both the current context and the root - context | 52 | 23 |
4,919 | public static Filter getFilterForLocation ( String location , String context ) throws IllegalArgumentException { String filter = makeLocationFilterString ( location , context ) ; try { return FrameworkUtil . createFilter ( filter ) ; } catch ( InvalidSyntaxException e ) { throw new IllegalArgumentException ( "location is invalid: " + location , e ) ; } } | returns a filter that matches services with the given location in both the given context and the root - context | 77 | 21 |
4,920 | protected void checkInputSize ( List < Object > input ) throws TransformationOperationException { int inputCount = getOperationInputCount ( ) ; int inputSize = input . size ( ) ; if ( inputCount == - 2 ) { return ; } else if ( inputCount == - 1 && input . size ( ) < 1 ) { throw new TransformationOperationException ( "There must be at least one input value." ) ; } else if ( inputCount != - 1 && inputSize != inputCount ) { throw new TransformationOperationException ( "The input values are not matching with the operation input count." ) ; } } | Checks if the input size is matching with the operation defined input count . If not a TransformationOperationException is thrown . | 126 | 24 |
4,921 | protected String getParameterOrDefault ( Map < String , String > parameters , String paramName , String defaultValue ) throws TransformationOperationException { return getParameter ( parameters , paramName , false , defaultValue ) ; } | Get the parameter with the given parameter name from the parameter map . If the parameters does not contain such a parameter take the default value instead . | 44 | 28 |
4,922 | protected String getParameterOrException ( Map < String , String > parameters , String paramName ) throws TransformationOperationException { return getParameter ( parameters , paramName , true , null ) ; } | Get the parameter with the given parameter name from the parameter map . If the parameters does not contain such a parameter the function throws a TransformationOperationException . | 39 | 30 |
4,923 | private String getParameter ( Map < String , String > parameters , String paramName , boolean abortOnError , String defaultValue ) throws TransformationOperationException { String value = parameters . get ( paramName ) ; if ( value != null ) { return value ; } if ( abortOnError ) { String error = String . format ( "There is no parameter with the name %s present. The step will be ignored." , paramName ) ; throw new TransformationOperationException ( error ) ; } logger . debug ( "There is no parameter with the name {} present. The value {} will be taken instead." , paramName , defaultValue ) ; return defaultValue ; } | Get a parameter from the parameter map . If abortOnError is true then a TransformationOperationException is thrown in case that the asked parameter does not exists . If this value is false the default value will be taken instead of throwing an exception . | 136 | 48 |
4,924 | protected Integer parseIntString ( String string , boolean abortOnError , int def ) throws TransformationOperationException { Integer integer = def ; if ( string == null ) { logger . debug ( "Given string is empty so the default value is taken." ) ; } try { integer = Integer . parseInt ( string ) ; } catch ( NumberFormatException e ) { StringBuilder builder = new StringBuilder ( ) ; builder . append ( "The string " ) . append ( string ) . append ( " is not a number. " ) ; if ( abortOnError ) { builder . append ( "The step will be skipped." ) ; } else { builder . append ( def ) . append ( " will be taken instead." ) ; } logger . warn ( builder . toString ( ) ) ; if ( abortOnError ) { throw new TransformationOperationException ( builder . toString ( ) ) ; } } return integer ; } | Parses a string to an integer object . AbortOnError defines if the function should throw an exception if an error occurs during the parsing . If it doesn t abort the given default value is given back as result on error . | 190 | 47 |
4,925 | protected Matcher generateMatcher ( String regex , String valueString ) throws TransformationOperationException { if ( regex == null ) { throw new TransformationOperationException ( "No regex defined. The step will be skipped." ) ; } try { Pattern pattern = Pattern . compile ( regex ) ; return pattern . matcher ( valueString ) ; } catch ( PatternSyntaxException e ) { String message = String . format ( "Given regex string %s can't be compiled. The step will be skipped." , regex ) ; logger . warn ( message ) ; throw new TransformationOperationException ( message ) ; } } | Generates a matcher for the given valueString with the given regular expression . | 124 | 16 |
4,926 | protected void configureJaxbMarshaller ( javax . xml . bind . Marshaller marshaller ) throws PropertyException { marshaller . setProperty ( javax . xml . bind . Marshaller . JAXB_FORMATTED_OUTPUT , m_formatOutput ) ; } | Configure a JAXB marshaller . | 65 | 10 |
4,927 | public Object getEntryValue ( JPAEntry entry ) { try { Class < ? > typeClass = loadClass ( entry . getType ( ) ) ; if ( typeClass == null ) { return entry . getValue ( ) ; } if ( typeClass == Character . class ) { if ( entry . getValue ( ) . length ( ) > 1 ) { LOGGER . warn ( "Too many chars in the string for a character type: " + entry . getValue ( ) ) ; LOGGER . warn ( "The first char of the string will be used." ) ; return entry . getValue ( ) . charAt ( 0 ) ; } else if ( entry . getValue ( ) . length ( ) != 0 ) { return entry . getValue ( ) . charAt ( 0 ) ; } } Object result = invokeValueOf ( typeClass , entry . getValue ( ) ) ; if ( result != null ) { return result ; } Constructor < ? > constructor = ClassUtils . getConstructorIfAvailable ( typeClass , String . class ) ; if ( constructor != null ) { return constructor . newInstance ( entry . getValue ( ) ) ; } LOGGER . debug ( "DefaultConverterStep didn't find any possibility to convert entry {}. " + "The simple string value will be returned" , entry ) ; } catch ( IllegalAccessException e ) { LOGGER . error ( "IllegalAccessException when trying to create object of type {}" , entry . getType ( ) , e ) ; } catch ( InvocationTargetException e ) { LOGGER . error ( "InvocationTargetException when trying to create object of type {}" , entry . getType ( ) , e ) ; } catch ( IllegalArgumentException e ) { LOGGER . error ( "IllegalArgumentException when trying to create object of type {}" , entry . getType ( ) , e ) ; } catch ( InstantiationException e ) { LOGGER . error ( "InstantiationException when trying to create object of type {}" , entry . getType ( ) , e ) ; } return entry . getType ( ) ; } | Tries to get the object value for a given JPAEntry . To instantiate the type first the static method valueOf of the type will be tried . If that didn t work then the constructor of the object with a string parameter is used . If that didn t work either the simple string will be set in the entry . | 448 | 66 |
4,928 | private Class < ? > loadClass ( String className ) { try { return EDBUtils . class . getClassLoader ( ) . loadClass ( className ) ; } catch ( ClassNotFoundException e ) { LOGGER . debug ( "Class {} can not be found by the EDB. This object type is not supported by the EDB." + " Maybe the conversion need to be done at model level." , className ) ; } return null ; } | Tries to load the class with the given name . Returns the class object if the class can be loaded . Returns null if the class could not be loaded . | 97 | 32 |
4,929 | private Object invokeValueOf ( Class < ? > clazz , String value ) throws IllegalAccessException , InvocationTargetException { try { return MethodUtils . invokeExactStaticMethod ( clazz , "valueOf" , value ) ; } catch ( NoSuchMethodException e ) { return null ; } } | Tries to invoke the method valueOf of the given class object . If this method can be called the result will be given back based on the given value which is used as parameter for the method . If this method can t be called null will be given back . | 65 | 53 |
4,930 | protected synchronized Expression getParsedExpression ( ) { if ( parsedExpression == null ) { try { parsedExpression = EXPRESSION_PARSER . parseExpression ( getExpression ( ) ) ; } catch ( ParseException e ) { throw new IllegalArgumentException ( "[" + getExpression ( ) + "] is not a valid SpEL expression" , e ) ; } } return parsedExpression ; } | Return a parsed SpEL expression . | 92 | 7 |
4,931 | public static VaadinConfirmDialog show ( final UI ui , final String windowCaption , final String message , final String okCaption , final String cancelCaption , final Runnable r ) { VaadinConfirmDialog d = getFactory ( ) . create ( windowCaption , message , okCaption , cancelCaption , null ) ; d . show ( ui , new Listener ( ) { private static final long serialVersionUID = 1L ; public void onClose ( VaadinConfirmDialog dialog ) { if ( dialog . isConfirmed ( ) ) { r . run ( ) ; } } } , true ) ; return d ; } | Shows a modal VaadinConfirmDialog in given window and executes Runnable if OK is chosen . | 139 | 23 |
4,932 | public final void show ( final UI ui , final Listener listener , final boolean modal ) { confirmListener = listener ; center ( ) ; setModal ( modal ) ; ui . addWindow ( this ) ; } | Show confirm dialog . | 48 | 4 |
4,933 | public EKBCommit addInsert ( Object insert ) { if ( insert != null ) { checkIfModel ( insert ) ; inserts . add ( ( OpenEngSBModel ) insert ) ; } return this ; } | Adds a model to the list of models which shall be inserted into the EDB . If the given object is not a model an IllegalArgumentException is thrown . | 45 | 33 |
4,934 | public EKBCommit addInserts ( Collection < ? > inserts ) { if ( inserts != null ) { for ( Object insert : inserts ) { checkIfModel ( insert ) ; this . inserts . add ( ( OpenEngSBModel ) insert ) ; } } return this ; } | Adds a collection of models which shall be inserted into the EDB . If one of the given objects is not a model an IllegalArgumentException is thrown . | 60 | 32 |
4,935 | public EKBCommit addUpdate ( Object update ) { if ( update != null ) { checkIfModel ( update ) ; updates . add ( ( OpenEngSBModel ) update ) ; } return this ; } | Adds a model to the list of models which shall be updated in the EDB . If the given object is not a model an IllegalArgumentException is thrown . | 45 | 33 |
4,936 | public EKBCommit addUpdates ( Collection < ? > updates ) { if ( updates != null ) { for ( Object update : updates ) { checkIfModel ( update ) ; this . updates . add ( ( OpenEngSBModel ) update ) ; } } return this ; } | Adds a collection of models which shall be updated in the EDB . If one of the given objects is not a model an IllegalArgumentException is thrown . | 60 | 32 |
4,937 | public EKBCommit addDelete ( Object delete ) { if ( delete != null ) { checkIfModel ( delete ) ; deletes . add ( ( OpenEngSBModel ) delete ) ; } return this ; } | Adds an model to the list of models which shall be deleted from the EDB . If the given object is not a model an IllegalArgumentException is thrown . | 46 | 33 |
4,938 | public EKBCommit addDeletes ( Collection < ? > deletes ) { if ( deletes != null ) { for ( Object delete : deletes ) { checkIfModel ( delete ) ; this . deletes . add ( ( OpenEngSBModel ) delete ) ; } } return this ; } | Adds a collection of models which shall be deleted from the EDB . If one of the given objects is not a model an IllegalArgumentException is thrown . | 64 | 32 |
4,939 | public Set < OWLClassExpression > getNestedClassExpressions ( ) { Set < OWLClassExpression > subConcepts = new HashSet < OWLClassExpression > ( ) ; for ( OWLAxiom ax : justification ) { subConcepts . addAll ( ax . getNestedClassExpressions ( ) ) ; } return subConcepts ; } | Gets the sub - concepts that appear in the axioms in this explanation | 83 | 16 |
4,940 | public static void store ( Explanation < OWLAxiom > explanation , OutputStream os ) throws IOException { try { OWLOntologyManager manager = OWLManager . createOWLOntologyManager ( ) ; OWLOntology ontology = manager . createOntology ( explanation . getAxioms ( ) ) ; OWLDataFactory df = manager . getOWLDataFactory ( ) ; OWLAnnotationProperty entailmentMarkerAnnotationProperty = df . getOWLAnnotationProperty ( ENTAILMENT_MARKER_IRI ) ; OWLAnnotation entailmentAnnotation = df . getOWLAnnotation ( entailmentMarkerAnnotationProperty , df . getOWLLiteral ( true ) ) ; OWLAxiom annotatedEntailment = explanation . getEntailment ( ) . getAnnotatedAxiom ( Collections . singleton ( entailmentAnnotation ) ) ; manager . addAxiom ( ontology , annotatedEntailment ) ; BufferedOutputStream bufferedOutputStream = new BufferedOutputStream ( os ) ; OWLXMLDocumentFormat justificationOntologyFormat = new OWLXMLDocumentFormat ( ) ; manager . saveOntology ( ontology , justificationOntologyFormat , bufferedOutputStream ) ; } catch ( OWLOntologyStorageException | OWLOntologyCreationException e ) { throw new RuntimeException ( e ) ; } } | Stores the specified explanation to the specified output stream | 299 | 10 |
4,941 | public static Explanation < OWLAxiom > load ( InputStream is ) throws IOException { try { OWLOntologyManager manager = OWLManager . createOWLOntologyManager ( ) ; OWLOntology ontology = manager . loadOntologyFromOntologyDocument ( new BufferedInputStream ( is ) ) ; OWLDataFactory df = manager . getOWLDataFactory ( ) ; OWLAnnotationProperty entailmentMarkerAnnotationProperty = df . getOWLAnnotationProperty ( ENTAILMENT_MARKER_IRI ) ; Set < OWLAxiom > justificationAxioms = new HashSet < OWLAxiom > ( ) ; OWLAxiom entailment = null ; for ( OWLAxiom ax : ontology . getAxioms ( ) ) { boolean isEntailmentAxiom = ! ax . getAnnotations ( entailmentMarkerAnnotationProperty ) . isEmpty ( ) ; if ( ! isEntailmentAxiom ) { justificationAxioms . add ( ax ) ; } else { entailment = ax . getAxiomWithoutAnnotations ( ) ; } } if ( entailment == null ) { throw new IllegalStateException ( "Not a serialisation of an Explanation" ) ; } return new Explanation < OWLAxiom > ( entailment , justificationAxioms ) ; } catch ( OWLOntologyCreationException e ) { throw new RuntimeException ( e ) ; } } | Loads a previously stored explanation from the specified input stream | 311 | 11 |
4,942 | public static boolean hasAnnotation ( CtClass clazz , String annotationName ) { ClassFile cf = clazz . getClassFile2 ( ) ; AnnotationsAttribute ainfo = ( AnnotationsAttribute ) cf . getAttribute ( AnnotationsAttribute . invisibleTag ) ; AnnotationsAttribute ainfo2 = ( AnnotationsAttribute ) cf . getAttribute ( AnnotationsAttribute . visibleTag ) ; return checkAnnotation ( ainfo , ainfo2 , annotationName ) ; } | Returns true if the given class has an annotation set with the given name returns false otherwise . | 91 | 18 |
4,943 | public static boolean hasAnnotation ( CtField field , String annotationName ) { FieldInfo info = field . getFieldInfo ( ) ; AnnotationsAttribute ainfo = ( AnnotationsAttribute ) info . getAttribute ( AnnotationsAttribute . invisibleTag ) ; AnnotationsAttribute ainfo2 = ( AnnotationsAttribute ) info . getAttribute ( AnnotationsAttribute . visibleTag ) ; return checkAnnotation ( ainfo , ainfo2 , annotationName ) ; } | Returns true if the given field has an annotation set with the given name returns false otherwise . | 88 | 18 |
4,944 | private static boolean checkAnnotation ( AnnotationsAttribute invisible , AnnotationsAttribute visible , String annotationName ) { boolean exist1 = false ; boolean exist2 = false ; if ( invisible != null ) { exist1 = invisible . getAnnotation ( annotationName ) != null ; } if ( visible != null ) { exist2 = visible . getAnnotation ( annotationName ) != null ; } return exist1 || exist2 ; } | Checks if an annotation with the given name is either in the invisible or in the visible annotation attributes . | 86 | 21 |
4,945 | private void checkBounds ( String source , Integer from , Integer to ) throws TransformationOperationException { Integer length = source . length ( ) ; if ( from > to ) { throw new TransformationOperationException ( "The from parameter is bigger than the to parameter" ) ; } if ( from < 0 || from > length ) { throw new TransformationOperationException ( "The from parameter is not fitting to the size of the source" ) ; } if ( to < 0 || to > length ) { throw new TransformationOperationException ( "The to parameter is not fitting to the size of the source" ) ; } } | Checks if the from and the to parameters are valid for the given source | 125 | 15 |
4,946 | private Integer getFromParameter ( Map < String , String > parameters ) throws TransformationOperationException { return getSubStringParameter ( parameters , fromParam , 0 ) ; } | Get the from parameter from the parameters . If the parameter is not set 0 is taken instead . | 34 | 19 |
4,947 | private Integer getToParameter ( Map < String , String > parameters , Integer defaultValue ) throws TransformationOperationException { return getSubStringParameter ( parameters , toParam , defaultValue ) ; } | Get the to parameter from the parameters . If the parameter is not set the defaultValue is taken instead . | 39 | 21 |
4,948 | private Integer getSubStringParameter ( Map < String , String > parameters , String parameterName , Integer defaultValue ) throws TransformationOperationException { String parameter = parameters . get ( parameterName ) ; if ( parameter == null ) { getLogger ( ) . debug ( "The {} parameter is not set, so the default value {} is taken." , parameterName , defaultValue ) ; return defaultValue ; } try { return Integer . parseInt ( parameter ) ; } catch ( NumberFormatException e ) { throw new TransformationOperationException ( "The " + parameterName + " parameter is not a number" ) ; } } | Returns the substring parameter with the given parameter or the given default value if the parameter name is not set . | 127 | 22 |
4,949 | @ Override public void storeAll ( Map mapEntries ) { int batchSize = getBatchSize ( ) ; if ( batchSize == 0 || mapEntries . size ( ) < batchSize ) { storeBatch ( mapEntries ) ; } else { Map batch = new HashMap ( batchSize ) ; while ( ! mapEntries . isEmpty ( ) ) { Iterator iter = mapEntries . entrySet ( ) . iterator ( ) ; while ( iter . hasNext ( ) && batch . size ( ) < batchSize ) { Map . Entry entry = ( Map . Entry ) iter . next ( ) ; batch . put ( entry . getKey ( ) , entry . getValue ( ) ) ; } storeBatch ( batch ) ; mapEntries . keySet ( ) . removeAll ( batch . keySet ( ) ) ; batch . clear ( ) ; } } } | Persist all entries from the specified map into the data store . | 188 | 13 |
4,950 | private static < E > List < OWLAxiom > getOrderedJustifications ( List < OWLAxiom > mups , final Set < Explanation < E > > allJustifications ) { Comparator < OWLAxiom > mupsComparator = new Comparator < OWLAxiom > ( ) { public int compare ( OWLAxiom o1 , OWLAxiom o2 ) { // The checker that appears in most MUPS has the lowest index // in the list int occ1 = getOccurrences ( o1 , allJustifications ) ; int occ2 = getOccurrences ( o2 , allJustifications ) ; return - occ1 + occ2 ; } } ; Collections . sort ( mups , mupsComparator ) ; return mups ; } | Orders the axioms in a single MUPS by the frequency of which they appear in all MUPS . | 167 | 23 |
4,951 | private static < E > int getOccurrences ( OWLAxiom ax , Set < Explanation < E > > axiomSets ) { int count = 0 ; for ( Explanation < E > explanation : axiomSets ) { if ( explanation . getAxioms ( ) . contains ( ax ) ) { count ++ ; } } return count ; } | Given an checker and a set of explanations this method determines how many explanations contain the checker . | 77 | 20 |
4,952 | protected void onMissingTypeVisit ( Table table , IndexField < ? > field ) { if ( ! Introspector . isModelClass ( field . getType ( ) ) ) { return ; } Field idField = Introspector . getOpenEngSBModelIdField ( field . getType ( ) ) ; if ( idField == null ) { LOG . warn ( "@Model class {} does not have an @OpenEngSBModelId" , field . getType ( ) ) ; return ; } DataType type = getTypeMap ( ) . getType ( idField . getType ( ) ) ; if ( type == null ) { LOG . warn ( "@OpenEngSBModelId field {} has an unmapped type {}" , field . getName ( ) , field . getType ( ) ) ; return ; } ( ( JdbcIndexField ) field ) . setMappedType ( type ) ; Column column = new Column ( getColumnNameTranslator ( ) . translate ( field ) , type ) ; table . addElement ( column ) ; // will hold the models OID onAfterFieldVisit ( table , column , field ) ; } | Called when type map returns null . | 240 | 8 |
4,953 | public Column set ( Option option , boolean set ) { if ( set ) { options . add ( option ) ; } else { options . remove ( option ) ; } return this ; } | Sets or unsets the given option for this column according to the set flag given . | 38 | 18 |
4,954 | public void setStart ( int x1 , int y1 ) { start . x = x1 ; start . y = y1 ; needsRefresh = true ; } | Sets the start point . | 35 | 6 |
4,955 | public void setEnd ( int x2 , int y2 ) { end . x = x2 ; end . y = y2 ; needsRefresh = true ; } | Sets the end point . | 35 | 6 |
4,956 | public void draw ( Graphics2D g ) { if ( needsRefresh ) refreshCurve ( ) ; g . draw ( curve ) ; // Draws the main part of the arrow. drawArrow ( g , end , control ) ; // Draws the arrow head. drawText ( g ) ; } | Draws the arrow on the indicated graphics environment . | 64 | 10 |
4,957 | public void drawHighlight ( Graphics2D g ) { if ( needsRefresh ) refreshCurve ( ) ; Graphics2D g2 = ( Graphics2D ) g . create ( ) ; g2 . setStroke ( new java . awt . BasicStroke ( 6.0f ) ) ; g2 . setColor ( HIGHLIGHT_COLOR ) ; g2 . draw ( curve ) ; g2 . transform ( affineToText ) ; g2 . fill ( bounds ) ; g2 . dispose ( ) ; } | Draws a highlight of the curve . | 116 | 8 |
4,958 | public void setLabel ( String label ) { this . label = label ; // if (GRAPHICS == null) return; bounds = METRICS . getStringBounds ( getLabel ( ) , GRAPHICS ) ; boolean upsideDown = end . x < start . x ; float dx = ( float ) bounds . getWidth ( ) / 2.0f ; float dy = ( curvy < 0.0f ) ^ upsideDown ? METRICS . getAscent ( ) : - METRICS . getDescent ( ) ; bounds . setRect ( bounds . getX ( ) - dx , bounds . getY ( ) + dy , bounds . getWidth ( ) , bounds . getHeight ( ) ) ; //System.out.println("Setting label" + label); } | Sets the label that will be drawn on the high arc point . | 166 | 14 |
4,959 | private void drawArrow ( Graphics g , Point head , Point away ) { int endX , endY ; double angle = Math . atan2 ( ( double ) ( away . x - head . x ) , ( double ) ( away . y - head . y ) ) ; angle += ARROW_ANGLE ; endX = ( ( int ) ( Math . sin ( angle ) * ARROW_LENGTH ) ) + head . x ; endY = ( ( int ) ( Math . cos ( angle ) * ARROW_LENGTH ) ) + head . y ; g . drawLine ( head . x , head . y , endX , endY ) ; angle -= 2 * ARROW_ANGLE ; endX = ( ( int ) ( Math . sin ( angle ) * ARROW_LENGTH ) ) + head . x ; endY = ( ( int ) ( Math . cos ( angle ) * ARROW_LENGTH ) ) + head . y ; g . drawLine ( head . x , head . y , endX , endY ) ; } | Draws an arrow head on the graphics object . The arrow geometry is based on the point of its head as well as another point which the arrow is defined as facing away from . This arrow head has no body . | 232 | 43 |
4,960 | public void refreshCurve ( ) { // System.out.println("Curve refreshing"); needsRefresh = false ; double lengthx = end . x - start . x ; double lengthy = end . y - start . y ; double centerx = ( ( double ) ( start . x + end . x ) ) / 2.0 ; double centery = ( ( double ) ( start . y + end . y ) ) / 2.0 ; double length = Math . sqrt ( lengthx * lengthx + lengthy * lengthy ) ; double factorx = length == 0.0 ? 0.0 : lengthx / length ; double factory = length == 0.0 ? 0.0 : lengthy / length ; control . x = ( int ) ( centerx + curvy * HEIGHT * factory ) ; control . y = ( int ) ( centery - curvy * HEIGHT * factorx ) ; high . x = ( int ) ( centerx + curvy * HEIGHT * factory / 2.0 ) ; high . y = ( int ) ( centery - curvy * HEIGHT * factorx / 2.0 ) ; curve . setCurve ( ( float ) start . x , ( float ) start . y , ( float ) control . x , ( float ) control . y , ( float ) end . x , ( float ) end . y ) ; affineToText = new AffineTransform ( ) ; affineToText . translate ( high . x , high . y ) ; affineToText . rotate ( Math . atan2 ( lengthy , lengthx ) ) ; if ( end . x < start . x ) affineToText . rotate ( Math . PI ) ; } | Refreshes the curve object . | 359 | 7 |
4,961 | public Rectangle2D getBounds ( ) { if ( needsRefresh ) refreshCurve ( ) ; Rectangle2D b = curve . getBounds ( ) ; Area area = new Area ( bounds ) ; area . transform ( affineToText ) ; b . add ( area . getBounds ( ) ) ; return b ; } | Returns the bounds . | 73 | 4 |
4,962 | private boolean intersects ( Point point , int fudge , QuadCurve2D . Float c ) { if ( ! c . intersects ( point . x - fudge , point . y - fudge , fudge << 1 , fudge << 1 ) ) return false ; if ( c . getFlatness ( ) < fudge ) return true ; QuadCurve2D . Float f1 = new QuadCurve2D . Float ( ) , f2 = new QuadCurve2D . Float ( ) ; c . subdivide ( f1 , f2 ) ; return intersects ( point , fudge , f1 ) || intersects ( point , fudge , f2 ) ; } | Checks if something is on the line . If it appears to be then it subdivides the curve into halves and tries again recursively until the flatness of the curve is less than the fudge . Frankly I am a fucking genius . I am one of two people in this department that could have possibly thought of this . | 148 | 67 |
4,963 | public HashMap < Variable , Object > chooseValues ( ) { MultiVariable mv = ( MultiVariable ) myVariable ; Variable [ ] internalVars = mv . getInternalVariables ( ) ; HashMap < Variable , Object > values = new HashMap < Variable , Object > ( ) ; for ( Variable v : internalVars ) { if ( v instanceof MultiVariable ) { MultiVariable nestedMv = ( MultiVariable ) v ; MultiDomain nestedMd = nestedMv . getDomain ( ) ; HashMap < Variable , Object > nested = nestedMd . chooseValues ( ) ; for ( Entry < Variable , Object > e : nested . entrySet ( ) ) { values . put ( e . getKey ( ) , e . getValue ( ) ) ; } } else { values . put ( v , v . getDomain ( ) . chooseValue ( ) ) ; } } return values ; } | Chooses values for all internal domains according to their own value choice functions . | 192 | 15 |
4,964 | public Rectangle getMinRectabgle ( ) { return new Rectangle ( ( int ) xLB . min , ( int ) yLB . min , ( int ) ( xUB . min - xLB . min ) , ( int ) ( yUB . min - yLB . min ) ) ; } | give min rectangle | 65 | 3 |
4,965 | public Rectangle getMaxRectabgle ( ) { return new Rectangle ( ( int ) xLB . max , ( int ) yLB . max , ( int ) ( xUB . max - xLB . max ) , ( int ) ( yUB . max - yLB . max ) ) ; } | give max rectangle | 65 | 3 |
4,966 | private boolean setLocation ( String global , String context , Map < String , Object > properties ) { String locationKey = "location." + context ; Object propvalue = properties . get ( locationKey ) ; if ( propvalue == null ) { properties . put ( locationKey , global ) ; } else if ( propvalue . getClass ( ) . isArray ( ) ) { Object [ ] locations = ( Object [ ] ) propvalue ; if ( ArrayUtils . contains ( locations , global ) ) { return false ; } Object [ ] newArray = Arrays . copyOf ( locations , locations . length + 1 ) ; newArray [ locations . length ] = global ; properties . put ( locationKey , newArray ) ; } else { if ( ( ( String ) propvalue ) . equals ( global ) ) { return false ; } Object [ ] newArray = new Object [ 2 ] ; newArray [ 0 ] = propvalue ; newArray [ 1 ] = global ; properties . put ( locationKey , newArray ) ; } return true ; } | returns true if location is not already set in the properties otherwise false | 219 | 14 |
4,967 | @ SuppressWarnings ( { "unchecked" } ) @ Override public Map processAll ( Set setEntries ) { Map results = new LiteMap ( ) ; for ( BinaryEntry entry : ( Set < BinaryEntry > ) setEntries ) { Object result = processEntry ( entry ) ; if ( result != NO_RESULT ) { results . put ( entry . getKey ( ) , result ) ; } } return results ; } | Process all entries in the specified set . | 94 | 8 |
4,968 | protected Object processEntry ( BinaryEntry entry ) { Binary binCurrent = entry . getBinaryValue ( ) ; if ( binCurrent == null && ! fAllowInsert ) { return fReturn ? null : NO_RESULT ; } PofValue pvCurrent = getPofValue ( binCurrent ) ; PofValue pvNew = getPofValue ( "newValue" ) ; Integer versionCurrent = ( Integer ) get ( pvCurrent ) ; Integer versionNew = ( Integer ) get ( pvNew ) ; if ( versionCurrent . equals ( versionNew ) ) { set ( pvNew , versionNew + 1 ) ; entry . updateBinaryValue ( pvNew . applyChanges ( ) ) ; return NO_RESULT ; } return fReturn ? pvCurrent . getValue ( ) : NO_RESULT ; } | Process the specified entry . | 177 | 5 |
4,969 | public static byte [ ] enhanceModel ( byte [ ] byteCode , ClassLoader ... loaders ) throws IOException , CannotCompileException { return enhanceModel ( byteCode , new Version ( "1.0.0" ) , loaders ) ; } | Try to enhance the object defined by the given byte code . Returns the enhanced class or null if the given class is no model as byte array . The version of the model will be set statical to 1 . 0 . 0 . There may be class loaders appended if needed . | 53 | 57 |
4,970 | public static byte [ ] enhanceModel ( byte [ ] byteCode , Version modelVersion , ClassLoader ... loaders ) throws IOException , CannotCompileException { CtClass cc = doModelModifications ( byteCode , modelVersion , loaders ) ; if ( cc == null ) { return null ; } byte [ ] newClass = cc . toBytecode ( ) ; cc . defrost ( ) ; cc . detach ( ) ; return newClass ; } | Try to enhance the object defined by the given byte code . Returns the enhanced class or null if the given class is no model as byte array . There may be class loaders appended if needed . | 95 | 40 |
4,971 | private static CtClass doModelModifications ( byte [ ] byteCode , Version modelVersion , ClassLoader ... loaders ) { if ( ! initiated ) { initiate ( ) ; } CtClass cc = null ; LoaderClassPath [ ] classloaders = new LoaderClassPath [ loaders . length ] ; try { InputStream stream = new ByteArrayInputStream ( byteCode ) ; cc = cp . makeClass ( stream ) ; if ( ! JavassistUtils . hasAnnotation ( cc , Model . class . getName ( ) ) ) { return null ; } LOGGER . debug ( "Model to enhance: {}" , cc . getName ( ) ) ; for ( int i = 0 ; i < loaders . length ; i ++ ) { classloaders [ i ] = new LoaderClassPath ( loaders [ i ] ) ; cp . appendClassPath ( classloaders [ i ] ) ; } doEnhancement ( cc , modelVersion ) ; LOGGER . info ( "Finished model enhancing for class {}" , cc . getName ( ) ) ; } catch ( IOException e ) { LOGGER . error ( "IOException while trying to enhance model" , e ) ; } catch ( RuntimeException e ) { LOGGER . error ( "RuntimeException while trying to enhance model" , e ) ; } catch ( CannotCompileException e ) { LOGGER . error ( "CannotCompileException while trying to enhance model" , e ) ; } catch ( NotFoundException e ) { LOGGER . error ( "NotFoundException while trying to enhance model" , e ) ; } catch ( ClassNotFoundException e ) { LOGGER . error ( "ClassNotFoundException while trying to enhance model" , e ) ; } finally { for ( int i = 0 ; i < loaders . length ; i ++ ) { if ( classloaders [ i ] != null ) { cp . removeClassPath ( classloaders [ i ] ) ; } } } return cc ; } | Try to perform the actual model enhancing . | 424 | 8 |
4,972 | private static void doEnhancement ( CtClass cc , Version modelVersion ) throws CannotCompileException , NotFoundException , ClassNotFoundException { CtClass inter = cp . get ( OpenEngSBModel . class . getName ( ) ) ; cc . addInterface ( inter ) ; addFields ( cc ) ; addGetOpenEngSBModelTail ( cc ) ; addSetOpenEngSBModelTail ( cc ) ; addRetrieveModelName ( cc ) ; addRetrieveModelVersion ( cc , modelVersion ) ; addOpenEngSBModelEntryMethod ( cc ) ; addRemoveOpenEngSBModelEntryMethod ( cc ) ; addRetrieveInternalModelId ( cc ) ; addRetrieveInternalModelTimestamp ( cc ) ; addRetrieveInternalModelVersion ( cc ) ; addToOpenEngSBModelValues ( cc ) ; addToOpenEngSBModelEntries ( cc ) ; cc . setModifiers ( cc . getModifiers ( ) & ~ Modifier . ABSTRACT ) ; } | Does the steps for the model enhancement . | 213 | 8 |
4,973 | private static void addFields ( CtClass clazz ) throws CannotCompileException , NotFoundException { CtField tail = CtField . make ( String . format ( "private Map %s = new HashMap();" , TAIL_FIELD ) , clazz ) ; clazz . addField ( tail ) ; String loggerDefinition = "private static final Logger %s = LoggerFactory.getLogger(%s.class.getName());" ; CtField logger = CtField . make ( String . format ( loggerDefinition , LOGGER_FIELD , clazz . getName ( ) ) , clazz ) ; clazz . addField ( logger ) ; } | Adds the fields for the model tail and the logger to the class . | 141 | 14 |
4,974 | private static void addGetOpenEngSBModelTail ( CtClass clazz ) throws CannotCompileException , NotFoundException { CtClass [ ] params = generateClassField ( ) ; CtMethod method = new CtMethod ( cp . get ( List . class . getName ( ) ) , "getOpenEngSBModelTail" , params , clazz ) ; StringBuilder body = new StringBuilder ( ) ; body . append ( createTrace ( "Called getOpenEngSBModelTail" ) ) . append ( String . format ( "return new ArrayList(%s.values());" , TAIL_FIELD ) ) ; method . setBody ( createMethodBody ( body . toString ( ) ) ) ; clazz . addMethod ( method ) ; } | Adds the getOpenEngSBModelTail method to the class . | 163 | 14 |
4,975 | private static void addSetOpenEngSBModelTail ( CtClass clazz ) throws CannotCompileException , NotFoundException { CtClass [ ] params = generateClassField ( List . class ) ; CtMethod method = new CtMethod ( CtClass . voidType , "setOpenEngSBModelTail" , params , clazz ) ; StringBuilder builder = new StringBuilder ( ) ; builder . append ( createTrace ( "Called setOpenEngSBModelTail" ) ) . append ( "if($1 != null) {for(int i = 0; i < $1.size(); i++) {" ) . append ( "OpenEngSBModelEntry entry = (OpenEngSBModelEntry) $1.get(i);" ) . append ( String . format ( "%s.put(entry.getKey(), entry); } }" , TAIL_FIELD ) ) ; method . setBody ( createMethodBody ( builder . toString ( ) ) ) ; clazz . addMethod ( method ) ; } | Adds the setOpenEngSBModelTail method to the class . | 217 | 14 |
4,976 | private static void addRetrieveModelName ( CtClass clazz ) throws CannotCompileException , NotFoundException { CtClass [ ] params = generateClassField ( ) ; CtMethod method = new CtMethod ( cp . get ( String . class . getName ( ) ) , "retrieveModelName" , params , clazz ) ; StringBuilder builder = new StringBuilder ( ) ; builder . append ( createTrace ( "Called retrieveModelName" ) ) . append ( String . format ( "return \"%s\";" , clazz . getName ( ) ) ) ; method . setBody ( createMethodBody ( builder . toString ( ) ) ) ; clazz . addMethod ( method ) ; } | Adds the retreiveModelName method to the class . | 151 | 12 |
4,977 | private static void addRetrieveInternalModelId ( CtClass clazz ) throws NotFoundException , CannotCompileException { CtField modelIdField = null ; CtClass temp = clazz ; while ( temp != null ) { for ( CtField field : temp . getDeclaredFields ( ) ) { if ( JavassistUtils . hasAnnotation ( field , OpenEngSBModelId . class . getName ( ) ) ) { modelIdField = field ; break ; } } temp = temp . getSuperclass ( ) ; } CtClass [ ] params = generateClassField ( ) ; CtMethod valueMethod = new CtMethod ( cp . get ( Object . class . getName ( ) ) , "retrieveInternalModelId" , params , clazz ) ; StringBuilder builder = new StringBuilder ( ) ; builder . append ( createTrace ( "Called retrieveInternalModelId" ) ) ; CtMethod idFieldGetter = getFieldGetter ( modelIdField , clazz ) ; if ( modelIdField == null || idFieldGetter == null ) { builder . append ( "return null;" ) ; } else { builder . append ( String . format ( "return %s();" , idFieldGetter . getName ( ) ) ) ; } valueMethod . setBody ( createMethodBody ( builder . toString ( ) ) ) ; clazz . addMethod ( valueMethod ) ; CtMethod nameMethod = new CtMethod ( cp . get ( String . class . getName ( ) ) , "retrieveInternalModelIdName" , generateClassField ( ) , clazz ) ; if ( modelIdField == null ) { nameMethod . setBody ( createMethodBody ( "return null;" ) ) ; } else { nameMethod . setBody ( createMethodBody ( "return \"" + modelIdField . getName ( ) + "\";" ) ) ; } clazz . addMethod ( nameMethod ) ; } | Adds the retrieveInternalModelId method to the class . | 411 | 11 |
4,978 | private static void addRetrieveInternalModelTimestamp ( CtClass clazz ) throws NotFoundException , CannotCompileException { CtClass [ ] params = generateClassField ( ) ; CtMethod method = new CtMethod ( cp . get ( Long . class . getName ( ) ) , "retrieveInternalModelTimestamp" , params , clazz ) ; StringBuilder builder = new StringBuilder ( ) ; builder . append ( createTrace ( "Called retrieveInternalModelTimestamp" ) ) . append ( String . format ( "return (Long) ((OpenEngSBModelEntry)%s.get(\"%s\")).getValue();" , TAIL_FIELD , EDBConstants . MODEL_TIMESTAMP ) ) ; method . setBody ( createMethodBody ( builder . toString ( ) ) ) ; clazz . addMethod ( method ) ; } | Adds the retrieveInternalModelTimestamp method to the class . | 188 | 12 |
4,979 | private static void addRetrieveInternalModelVersion ( CtClass clazz ) throws NotFoundException , CannotCompileException { CtClass [ ] params = generateClassField ( ) ; CtMethod method = new CtMethod ( cp . get ( Integer . class . getName ( ) ) , "retrieveInternalModelVersion" , params , clazz ) ; StringBuilder builder = new StringBuilder ( ) ; builder . append ( createTrace ( "Called retrieveInternalModelVersion" ) ) . append ( String . format ( "return (Integer) ((OpenEngSBModelEntry)%s.get(\"%s\")).getValue();" , TAIL_FIELD , EDBConstants . MODEL_VERSION ) ) ; method . setBody ( createMethodBody ( builder . toString ( ) ) ) ; clazz . addMethod ( method ) ; } | Adds the retrieveInternalModelVersion method to the class . | 182 | 11 |
4,980 | private static void addToOpenEngSBModelValues ( CtClass clazz ) throws NotFoundException , CannotCompileException , ClassNotFoundException { StringBuilder builder = new StringBuilder ( ) ; CtClass [ ] params = generateClassField ( ) ; CtMethod m = new CtMethod ( cp . get ( List . class . getName ( ) ) , "toOpenEngSBModelValues" , params , clazz ) ; builder . append ( createTrace ( "Add elements of the model tail" ) ) . append ( "List elements = new ArrayList();\n" ) . append ( createTrace ( "Add properties of the model" ) ) . append ( createModelEntryList ( clazz ) ) . append ( "return elements;" ) ; m . setBody ( createMethodBody ( builder . toString ( ) ) ) ; clazz . addMethod ( m ) ; } | Adds the toOpenEngSBModelValues method to the class . | 188 | 13 |
4,981 | private static void addToOpenEngSBModelEntries ( CtClass clazz ) throws NotFoundException , CannotCompileException , ClassNotFoundException { CtClass [ ] params = generateClassField ( ) ; CtMethod m = new CtMethod ( cp . get ( List . class . getName ( ) ) , "toOpenEngSBModelEntries" , params , clazz ) ; StringBuilder builder = new StringBuilder ( ) ; builder . append ( createTrace ( "Add elements of the model tail" ) ) . append ( "List elements = new ArrayList();\n" ) . append ( String . format ( "elements.addAll(%s.values());\n" , TAIL_FIELD ) ) . append ( "elements.addAll(toOpenEngSBModelValues());\n" ) . append ( "return elements;" ) ; m . setBody ( createMethodBody ( builder . toString ( ) ) ) ; clazz . addMethod ( m ) ; } | Adds the getOpenEngSBModelEntries method to the class . | 212 | 14 |
4,982 | private static String createModelEntryList ( CtClass clazz ) throws NotFoundException , CannotCompileException { StringBuilder builder = new StringBuilder ( ) ; CtClass tempClass = clazz ; while ( tempClass != null ) { for ( CtField field : tempClass . getDeclaredFields ( ) ) { String property = field . getName ( ) ; if ( property . equals ( TAIL_FIELD ) || property . equals ( LOGGER_FIELD ) || JavassistUtils . hasAnnotation ( field , IgnoredModelField . class . getName ( ) ) ) { builder . append ( createTrace ( String . format ( "Skip property '%s' of the model" , property ) ) ) ; continue ; } builder . append ( handleField ( field , clazz ) ) ; } tempClass = tempClass . getSuperclass ( ) ; } return builder . toString ( ) ; } | Generates the list of OpenEngSBModelEntries which need to be added . Also adds the entries of the super classes . | 194 | 26 |
4,983 | private static String handleField ( CtField field , CtClass clazz ) throws NotFoundException , CannotCompileException { StringBuilder builder = new StringBuilder ( ) ; CtClass fieldType = field . getType ( ) ; String property = field . getName ( ) ; if ( fieldType . equals ( cp . get ( File . class . getName ( ) ) ) ) { return handleFileField ( property , clazz ) ; } CtMethod getter = getFieldGetter ( field , clazz ) ; if ( getter == null ) { LOGGER . warn ( String . format ( "Ignoring property '%s' since there is no getter for it defined" , property ) ) ; } else if ( fieldType . isPrimitive ( ) ) { builder . append ( createTrace ( String . format ( "Handle primitive type property '%s'" , property ) ) ) ; CtPrimitiveType primitiveType = ( CtPrimitiveType ) fieldType ; String wrapperName = primitiveType . getWrapperName ( ) ; builder . append ( String . format ( "elements.add(new OpenEngSBModelEntry(\"%s\", %s.valueOf(%s()), %s.class));\n" , property , wrapperName , getter . getName ( ) , wrapperName ) ) ; } else { builder . append ( createTrace ( String . format ( "Handle property '%s'" , property ) ) ) . append ( String . format ( "elements.add(new OpenEngSBModelEntry(\"%s\", %s(), %s.class));\n" , property , getter . getName ( ) , fieldType . getName ( ) ) ) ; } return builder . toString ( ) ; } | Analyzes the given field and add logic based on the type of the field . | 374 | 16 |
4,984 | private static String handleFileField ( String property , CtClass clazz ) throws NotFoundException , CannotCompileException { String wrapperName = property + "wrapper" ; StringBuilder builder = new StringBuilder ( ) ; builder . append ( createTrace ( String . format ( "Handle File type property '%s'" , property ) ) ) . append ( String . format ( "if(%s == null) {" , property ) ) . append ( String . format ( "elements.add(new OpenEngSBModelEntry(\"%s\"" , wrapperName ) ) . append ( ", null, FileWrapper.class));}\n else {" ) . append ( String . format ( "FileWrapper %s = new FileWrapper(%s);\n" , wrapperName , property ) ) . append ( String . format ( "%s.serialize();\n" , wrapperName ) ) . append ( String . format ( "elements.add(new OpenEngSBModelEntry(\"%s\",%s,%s.getClass()));}\n" , wrapperName , wrapperName , wrapperName ) ) ; addFileFunction ( clazz , property ) ; return builder . toString ( ) ; } | Creates the logic which is needed to handle fields which are File types since they need special treatment . | 259 | 20 |
4,985 | private static CtMethod getFieldGetter ( CtField field , CtClass clazz ) throws NotFoundException { if ( field == null ) { return null ; } return getFieldGetter ( field , clazz , false ) ; } | Returns the getter to a given field of the given class object and returns null if there is no getter for the given field defined . | 49 | 28 |
4,986 | private static CtMethod getFieldGetter ( CtField field , CtClass clazz , boolean failover ) throws NotFoundException { CtMethod method = new CtMethod ( field . getType ( ) , "descCreateMethod" , new CtClass [ ] { } , clazz ) ; String desc = method . getSignature ( ) ; String getter = getPropertyGetter ( field , failover ) ; try { return clazz . getMethod ( getter , desc ) ; } catch ( NotFoundException e ) { // try once again with getXXX instead of isXXX if ( isBooleanType ( field ) ) { return getFieldGetter ( field , clazz , true ) ; } LOGGER . debug ( String . format ( "No getter with the name '%s' and the description '%s' found" , getter , desc ) ) ; return null ; } } | Returns the getter method in case it exists or returns null if this is not the case . The failover parameter is needed to deal with boolean types since it should be allowed to allow getters in the form of isXXX or getXXX . | 189 | 49 |
4,987 | private static String getPropertyGetter ( CtField field , boolean failover ) throws NotFoundException { String property = field . getName ( ) ; if ( ! failover && isBooleanType ( field ) ) { return String . format ( "is%s%s" , Character . toUpperCase ( property . charAt ( 0 ) ) , property . substring ( 1 ) ) ; } else { return String . format ( "get%s%s" , Character . toUpperCase ( property . charAt ( 0 ) ) , property . substring ( 1 ) ) ; } } | Returns the name of the corresponding getter to a properties name and type . The failover is needed to support both getter name types for boolean properties . | 127 | 31 |
4,988 | private static CtClass [ ] generateClassField ( Class < ? > ... classes ) throws NotFoundException { CtClass [ ] result = new CtClass [ classes . length ] ; for ( int i = 0 ; i < classes . length ; i ++ ) { result [ i ] = cp . get ( classes [ i ] . getName ( ) ) ; } return result ; } | Generates a CtClass field out of a Class field . | 79 | 12 |
4,989 | private static void addFileFunction ( CtClass clazz , String property ) throws NotFoundException , CannotCompileException { String wrapperName = property + "wrapper" ; String funcName = "set" ; funcName = funcName + Character . toUpperCase ( wrapperName . charAt ( 0 ) ) ; funcName = funcName + wrapperName . substring ( 1 ) ; String setterName = "set" ; setterName = setterName + Character . toUpperCase ( property . charAt ( 0 ) ) ; setterName = setterName + property . substring ( 1 ) ; CtClass [ ] params = generateClassField ( FileWrapper . class ) ; CtMethod newFunc = new CtMethod ( CtClass . voidType , funcName , params , clazz ) ; newFunc . setBody ( "{ " + setterName + "($1.returnFile());\n }" ) ; clazz . addMethod ( newFunc ) ; } | Adds the functionality that the models can handle File objects themselves . | 211 | 12 |
4,990 | private static String urlEncodeParameter ( String parameter ) { try { return URLEncoder . encode ( parameter , "UTF-8" ) ; } catch ( UnsupportedEncodingException ex ) { log . warn ( "Could not encode parameter." , ex ) ; } return parameter ; } | URLEncodes the given Parameter in UTF - 8 | 61 | 12 |
4,991 | public static void runWithContext ( Runnable r ) { try { browserStack . push ( SwingFrame . getActiveWindow ( ) . getVisibleTab ( ) ) ; Subject . setCurrent ( SwingFrame . getActiveWindow ( ) . getSubject ( ) ) ; r . run ( ) ; } finally { Subject . setCurrent ( null ) ; browserStack . pop ( ) ; } } | As the current subject can be different for each Swing Window this method ensure that no wrong subject stays as current subject | 83 | 22 |
4,992 | protected Reader createResourceReader ( Resource resource ) { try { return new InputStreamReader ( resource . getInputStream ( ) ) ; } catch ( IOException e ) { throw new RuntimeException ( e ) ; } } | Create a reader for the specified resource . | 45 | 8 |
4,993 | public void shutdown ( ) { ClassLoader origClassLoader = Thread . currentThread ( ) . getContextClassLoader ( ) ; try { ClassLoader orientClassLoader = OIndexes . class . getClassLoader ( ) ; Thread . currentThread ( ) . setContextClassLoader ( orientClassLoader ) ; graph . close ( ) ; } finally { Thread . currentThread ( ) . setContextClassLoader ( origClassLoader ) ; } } | Shuts down the graph database | 91 | 6 |
4,994 | public void cleanDatabase ( ) { lockingMechanism . writeLock ( ) . lock ( ) ; try { for ( ODocument edge : graph . browseEdges ( ) ) { edge . delete ( ) ; } for ( ODocument node : graph . browseVertices ( ) ) { node . delete ( ) ; } } finally { lockingMechanism . writeLock ( ) . unlock ( ) ; } } | Deletes all edges and nodes from the graph database . This method is used in the tests to have at every test the same start situation . | 84 | 28 |
4,995 | private void checkTransformationDescriptionId ( TransformationDescription description ) { if ( description . getId ( ) == null ) { description . setId ( "EKBInternal-" + counter . incrementAndGet ( ) ) ; } } | Tests if a transformation description has an id and adds an unique id if it hasn t one . | 47 | 20 |
4,996 | private List < ODocument > getEdgesBetweenModels ( String source , String target ) { ODocument from = getModel ( source ) ; ODocument to = getModel ( target ) ; String query = "select from E where out = ? AND in = ?" ; return graph . query ( new OSQLSynchQuery < ODocument > ( query ) , from , to ) ; } | Returns all edges which start at the source model and end in the target model . | 83 | 16 |
4,997 | private List < ODocument > getNeighborsOfModel ( String model ) { String query = String . format ( "select from Models where in.out.%s in [?]" , OGraphDatabase . LABEL ) ; List < ODocument > neighbors = graph . query ( new OSQLSynchQuery < ODocument > ( query ) , model ) ; return neighbors ; } | Returns all neighbors of a model . | 81 | 7 |
4,998 | private ODocument getOrCreateModel ( String model ) { ODocument node = getModel ( model ) ; if ( node == null ) { node = graph . createVertex ( "Models" ) ; OrientModelGraphUtils . setIdFieldValue ( node , model . toString ( ) ) ; OrientModelGraphUtils . setActiveFieldValue ( node , false ) ; node . save ( ) ; } return node ; } | Returns the model with the given name or creates one if it isn t existing until then and returns the new one . | 91 | 23 |
4,999 | private ODocument getModel ( String model ) { String query = String . format ( "select from Models where %s = ?" , OGraphDatabase . LABEL ) ; List < ODocument > from = graph . query ( new OSQLSynchQuery < ODocument > ( query ) , model ) ; if ( from . size ( ) > 0 ) { return from . get ( 0 ) ; } else { return null ; } } | Returns the model with the given name . | 93 | 8 |
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