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Add xenium_skin_mixed sample13 SpaceTravLR outputs (no perturbations) (part 8)
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format spacetravlr_training_log v1
gene Acvr2b
seed_only false
per_cell_cnn_export true
cnn_epochs_config 10
learning_rate 0.0002
lasso_n_iter_max 100
lasso_tol 0.0001
# summary: cluster_id, n_cells, n_modulators, lasso_r2, lasso_train_mse, lasso_fista_iters, lasso_converged, cnn_epochs_ran, cnn_mse_first, cnn_mse_last
cluster_id n_cells n_modulators lasso_r2 lasso_train_mse lasso_fista_iters lasso_converged cnn_epochs_ran cnn_mse_first cnn_mse_last
0 263 637 0.776826 0.000012 100 false 10 0.000015 0.000014
1 752 637 0.566522 0.000005 100 false 10 0.000011 0.000006
2 4234 637 0.828186 0.000009 100 false 10 0.000069 0.000030
3 3435 637 0.256854 0.000005 100 false 10 0.000006 0.000006
4 77 637 0.237925 0.000016 100 false 10 0.000129 0.000037
5 220 637 0.551370 0.000018 100 false 10 0.000041 0.000027
6 2395 637 0.353627 0.000005 100 false 10 0.000006 0.000006
7 14 637 0.000000 0.000000 1 true 10 0.000000 0.000000
8 534 637 0.661425 0.000007 100 false 10 0.000018 0.000010
9 232 637 0.598667 0.000006 100 false 10 0.000024 0.000013
10 108 637 0.000000 0.000000 1 true 10 0.000000 0.000000
# cnn_mse_by_epoch: cluster_id, epoch, train_mse
cluster_id epoch train_mse
0 0 0.000015
0 1 0.000015
0 2 0.000015
0 3 0.000014
0 4 0.000014
0 5 0.000014
0 6 0.000014
0 7 0.000014
0 8 0.000014
0 9 0.000014
1 0 0.000011
1 1 0.000010
1 2 0.000008
1 3 0.000007
1 4 0.000006
1 5 0.000006
1 6 0.000006
1 7 0.000006
1 8 0.000006
1 9 0.000006
2 0 0.000069
2 1 0.000063
2 2 0.000058
2 3 0.000053
2 4 0.000048
2 5 0.000044
2 6 0.000040
2 7 0.000036
2 8 0.000033
2 9 0.000030
3 0 0.000006
3 1 0.000006
3 2 0.000006
3 3 0.000006
3 4 0.000006
3 5 0.000006
3 6 0.000006
3 7 0.000006
3 8 0.000006
3 9 0.000006
4 0 0.000129
4 1 0.000085
4 2 0.000052
4 3 0.000030
4 4 0.000019
4 5 0.000018
4 6 0.000023
4 7 0.000030
4 8 0.000035
4 9 0.000037
5 0 0.000041
5 1 0.000038
5 2 0.000036
5 3 0.000034
5 4 0.000032
5 5 0.000030
5 6 0.000029
5 7 0.000028
5 8 0.000027
5 9 0.000027
6 0 0.000006
6 1 0.000006
6 2 0.000006
6 3 0.000006
6 4 0.000006
6 5 0.000006
6 6 0.000006
6 7 0.000006
6 8 0.000006
6 9 0.000006
7 0 0.000000
7 1 0.000000
7 2 0.000000
7 3 0.000000
7 4 0.000000
7 5 0.000000
7 6 0.000000
7 7 0.000000
7 8 0.000000
7 9 0.000000
8 0 0.000018
8 1 0.000017
8 2 0.000016
8 3 0.000014
8 4 0.000013
8 5 0.000012
8 6 0.000011
8 7 0.000011
8 8 0.000010
8 9 0.000010
9 0 0.000024
9 1 0.000020
9 2 0.000018
9 3 0.000016
9 4 0.000015
9 5 0.000014
9 6 0.000014
9 7 0.000013
9 8 0.000013
9 9 0.000013
10 0 0.000000
10 1 0.000000
10 2 0.000000
10 3 0.000000
10 4 0.000000
10 5 0.000000
10 6 0.000000
10 7 0.000000
10 8 0.000000
10 9 0.000000