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xxyux/Distributed-SpMV/DistSpMV_Balanced.c
#pragma omp parallel for
100
ads+1) * sizeof(int)); int stridennz = ceil((double)sub_local_mtx.nnznum/(double)nthreads); <LOOP-START>for (int tid = 0; tid <= nthreads; tid++) { int boundary = tid * stridennz; boundary = boundary > sub_local_mtx.nnznum ? sub_local_mtx.nnznum : boundary; csrSplitter[ti...
xxyux/Distributed-SpMV/DistSpMV_Balanced.c
#pragma omp parallel for
100
MPI_Barrier(MPI_COMM_WORLD); if(id==0) gettimeofday(&t1,NULL); // Compute local spmv // <LOOP-START>// for (int i = 0; i < sub_local_mtx.rownum; i++) // { // local_y[i]=0; // for (int j = sub_local_mtx.rowptr[i]; j < sub_local_mtx.rowptr[i + 1]; j++) // { ...
xxyux/Distributed-SpMV/DistSpMV_Balanced.c
#pragma omp parallel for
100
al_y[i] += sub_local_mtx.val[j] * x[sub_local_mtx.colidx[j]]; // } // } <LOOP-START>for (int tid = 0; tid < nthreads; tid++) { for (int u = csrSplitter[tid]; u < csrSplitter[tid+1]; u++) { local_y[u] = 0; for (int h = sub_local_...
xxyux/Distributed-SpMV/DistSpMV_Balanced.c
#pragma omp parallel for
100
ur_time; } } stridennz = ceil((double)sub_remote_mtx.nnznum/(double)nthreads); <LOOP-START>for (int tid = 0; tid <= nthreads; tid++) { int boundary = tid * stridennz; boundary = boundary > sub_remote_mtx.nnznum ? sub_remote_mtx.nnznum : boundary; csrSplitter[...
xxyux/Distributed-SpMV/DistSpMV_Balanced.c
#pragma omp parallel for
100
dary, sub_remote_mtx.rownum + 1) - 1; } for (int iter = 0; iter < NTIMES; iter++) { // <LOOP-START>// for (int i = 0; i < sub_remote_mtx.rownum; i++) { // remote_y[i]=0; // for (int j = sub_remote_mtx.rowptr[i]; j < sub_remote_mtx.rowptr[i + 1]; j++) // remot...
xxyux/Distributed-SpMV/DistSpMV_Balanced.c
#pragma omp parallel for
100
// } MPI_Barrier(MPI_COMM_WORLD); if(id==0) gettimeofday(&t1,NULL); <LOOP-START>for (int tid = 0; tid < nthreads; tid++) { for (int u = csrSplitter[tid]; u < csrSplitter[tid+1]; u++) { remote_y[u] = 0; for (int h = sub_remot...
xxyux/Distributed-SpMV/DistSpMV.c
#pragma omp parallel for
100
threads+1) * sizeof(int)); int stridennz = ceil((double)submatrix.nnznum/(double)nthreads); <LOOP-START>for (int tid = 0; tid <= nthreads; tid++) { int boundary = tid * stridennz; boundary = boundary > submatrix.nnznum ? submatrix.nnznum : boundary; csrSplitter[tid] = bin...
xxyux/Distributed-SpMV/DistSpMV.c
#pragma omp parallel for
100
q++) { MPI_Barrier(MPI_COMM_WORLD); if(id==0) gettimeofday(&t1, NULL); <LOOP-START>for (int tid = 0; tid < nthreads; tid++) { for (int u = csrSplitter[tid]; u < csrSplitter[tid+1]; u++) { y[u] = 0; for (int h = submatrix.rowptr...
xxyux/Distributed-SpMV/DistSpMV.c
#pragma omp parallel for
100
usec - t1.tv_usec) / 1000.0); } // for (int q = 0; q < NTIMES; q++) // { // <LOOP-START>// for (int i=0;i<submatrix.rownum;i++) // { // y[i] = 0; // for (int u = submatrix.rowptr[i];u<submatrix.rowptr[i+1]; u++) // { // y[i] += subm...
slcs-jsc/jurassic/src/jurassic.c
#pragma omp parallel for default(none) shared(ctl,tbl,id,nu,f,n,dnu)
100
1; i < n; i++) dnu = MIN(dnu, nu[i] - nu[i - 1]); /* Compute source function table... */ <LOOP-START>for (int it = 0; it < TBLNS; it++) { /* Set temperature... */ tbl->st[it] = LIN(0.0, TMIN, TBLNS - 1.0, TMAX, (double) it); /* Integrate Planck function... */ double fsum = tbl->sr[i...
slcs-jsc/jurassic/src/jurassic.c
#pragma omp parallel for default(none) shared(ctl,atm,obs,k,x0,yy0,n,m,iqa) private(x1, yy1, atm1, obs1)
100
nitialize kernel matrix... */ gsl_matrix_set_zero(k); /* Loop over state vector elements... */ <LOOP-START>for (size_t j = 0; j < n; j++) { /* Allocate... */ x1 = gsl_vector_alloc(n); yy1 = gsl_vector_alloc(m); ALLOC(atm1, atm_t, 1); ALLOC(obs1, obs_t, 1); /* Set perturbation size... */ ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
ead binary data... */ cms_sol_t *sol = cms_read_sol(cms_ptr, inout); /* Evaluate... */ <LOOP-START>for (size_t ix = 0; ix < nx; ix++) for (size_t iy = 0; iy < ny; iy++) { double val, x[] = { lon[ix], lat[iy] }; cms_eval(cms_ptr, sol, x, &val); array[ARRAY_3D(ix, iy, ny, ip, np)] = (float) val; }...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
inout); FREAD(sarray, unsigned short, nxy * nz, inout); /* Convert to float... */ <LOOP-START>for (size_t ixy = 0; ixy < nxy; ixy++) for (size_t iz = 0; iz < nz; iz++) array[ixy * nz + iz] = (float) (sarray[ixy * nz + iz] * scl[iz] + off[iz]); } /* Compress array and output compressed s...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
l[iz] = (max[iz] - min[iz]) / 65533.; off[iz] = min[iz]; } /* Convert to short... */ <LOOP-START>for (size_t ixy = 0; ixy < nxy; ixy++) for (size_t iz = 0; iz < nz; iz++) if (scl[iz] != 0) sarray[ixy * nz + iz] = (unsigned short) ((array[ixy * nz + iz] - off[iz]) / scl[iz] + .5); else ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) private(ci,cw)
100
s, double *zs) { INTPOL_INIT; ctl->met_tropo = met_tropo; read_met_tropo(ctl, clim, met); <LOOP-START>for (int ix = 0; ix < nx; ix++) for (int iy = 0; iy < ny; iy++) { intpol_met_space_2d(met, met->pt, lons[ix], lats[iy], &pt[iy * nx + ix], ci, cw, 1); intpol_met_space_2d(met, met->ps, lo...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
tm_t * atm) { /* Initialize pressure consistent with zeta... */ if (ctl->vert_coord_ap == 1) { <LOOP-START>for (int ip = 0; ip < atm->np; ip++) { INTPOL_INIT; intpol_met_4d_coord(met0, met0->zetal, met0->pl, met1, met1->zetal, met1->pl, atm->time[ip], atm->q[ctl->qnt_zeta][ip], atm->lon[ip], ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
(ctl->chemgrid_lat1 - ctl->chemgrid_lat0) / ctl->chemgrid_ny; /* Set vertical coordinates... */ <LOOP-START>for (int iz = 0; iz < ctl->chemgrid_nz; iz++) { z[iz] = ctl->chemgrid_z0 + dz * (iz + 0.5); press[iz] = P(z[iz]); }<LOOP-END> <OMP-START>#pragma omp parallel for default(shared)<OMP-END>
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
double t0 = tt - 0.5 * ctl->dt_mod; double t1 = tt + 0.5 * ctl->dt_mod; /* Get indices... */ <LOOP-START>for (int ip = 0; ip < atm->np; ip++) { ixs[ip] = (int) ((atm->lon[ip] - ctl->chemgrid_lon0) / dlon); iys[ip] = (int) ((atm->lat[ip] - ctl->chemgrid_lat0) / dlat); izs[ip] = (int) ((Z(atm->p[ip]) -...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
for (int ix = 0; ix < ctl->chemgrid_nx; ix++) lon[ix] = ctl->chemgrid_lon0 + dlon * (ix + 0.5); <LOOP-START>for (int iy = 0; iy < ctl->chemgrid_ny; iy++) { lat[iy] = ctl->chemgrid_lat0 + dlat * (iy + 0.5); area[iy] = dlat * dlon * SQR(RE * M_PI / 180.) * cos(lat[iy] * M_PI / 180.); }<LOOP-END> <OMP-...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
zs[ip], ctl->chemgrid_nz)] += atm->q[ctl->qnt_m][ip]; /* Assign grid data to air parcels ... */ <LOOP-START>for (int ip = 0; ip < atm->np; ip++) if (izs[ip] >= 0) { /* Interpolate temperature... */ double temp; INTPOL_INIT; intpol_met_time_3d(met0, met0->t, met1, met1->t, tt, press[izs[...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
module_chem_init( ctl_t * ctl, clim_t * clim, met_t * met0, met_t * met1, atm_t * atm) { <LOOP-START>for (int ip = 0; ip < atm->np; ip++) { /* Set H2O and O3 using meteo data... */ INTPOL_INIT; if (ctl->qnt_Ch2o >= 0) { double h2o; INTPOL_3D(h2o, 1); SET_ATM(qnt_Ch2o, h2o); ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
acc data present(ctl,clim,atm,ixs,iys,izs) #pragma acc parallel loop independent gang vector #else <LOOP-START>for (int ip = 0; ip < np; ip++) { ixs[ip] = (int) ((atm->lon[ip] - ctl->mixing_lon0) / dlon); iys[ip] = (int) ((atm->lat[ip] - ctl->mixing_lat0) / dlat); izs[ip] = (int) ((Z(atm->p[ip]) - ctl->mix...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for
100
#pragma acc parallel loop independent gang vector #else #ifdef __NVCOMPILER #pragma novector #endif <LOOP-START>for (int i = 0; i < ngrid; i++) { count[i] = 0; cmean[i] = 0; }<LOOP-END> <OMP-START>#pragma omp parallel for<OMP-END>
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for
100
#pragma acc parallel loop independent gang vector #else #ifdef __NVCOMPILER #pragma novector #endif <LOOP-START>for (int i = 0; i < ngrid; i++) if (count[i] > 0) cmean[i] /= count[i]; /* Calculate interparcel mixing... */ #ifdef _OPENACC #pragma acc parallel loop independent gang vector #else #pragma omp p...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for
100
te interparcel mixing... */ #ifdef _OPENACC #pragma acc parallel loop independent gang vector #else <LOOP-START>for (int ip = 0; ip < np; ip++) if (izs[ip] >= 0) { /* Set mixing parameter... */ double mixparam = 1.0; if (ctl->mixing_trop < 1 || ctl->mixing_strat < 1) { double w = tropo_weight...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
erators... */ if (ctl->rng_type == 0) { /* Uniform distribution... */ if (method == 0) { <LOOP-START>for (size_t i = 0; i < n; ++i) rs[i] = gsl_rng_uniform(rng[omp_get_thread_num()]); } /* Normal distribution... */ else if (method == 1) { #pragma omp parallel for default(shared) for (size...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
orm(rng[omp_get_thread_num()]); } /* Normal distribution... */ else if (method == 1) { <LOOP-START>for (size_t i = 0; i < n; ++i) rs[i] = gsl_ran_gaussian_ziggurat(rng[omp_get_thread_num()], 1.0); } /* Update of random numbers on device... */ #ifdef _OPENACC #pragma acc update device(rs[:n]) }...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
ifdef _OPENACC #pragma acc data present(rs) #pragma acc parallel loop independent gang vector #else <LOOP-START>for (size_t i = 0; i < n + 1; ++i) { uint64_t r, t, x, y, z; y = x = (rng_ctr + i) * key; z = y + key; x = x * x + y; x = (x >> 32) | (x << 32); x = x * x + z; x = (x...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
. */ if (method == 1) { #ifdef _OPENACC #pragma acc parallel loop independent gang vector #else <LOOP-START>for (size_t i = 0; i < n; i += 2) { double r = sqrt(-2.0 * log(rs[i])); double phi = 2.0 * M_PI * rs[i + 1]; rs[i] = r * cosf((float) phi); rs[i + 1] = r * sinf((float) phi); }<LOOP-END> <OMP-START>...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
f /* Get box index... */ #ifdef _OPENACC #pragma acc parallel loop independent gang vector #else <LOOP-START>for (int ip = 0; ip < np; ip++) { a[ip] = (double) ((locate_reg(met0->lon, met0->nx, atm->lon[ip]) * met0->ny + locate_reg(met0->lat, met0->ny, atm->lat[ip])) * met0->np + locate_irr(met0->p, m...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
p[0:np]) #pragma acc data present(a,p,help) #pragma acc parallel loop independent gang vector #else <LOOP-START>for (int ip = 0; ip < np; ip++) help[ip] = a[p[ip]]; #ifdef _OPENACC #pragma acc parallel loop independent gang vector #else #pragma omp parallel for default(shared) for (int ip = 0; ip < np; ip++) ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
+) help[ip] = a[p[ip]]; #ifdef _OPENACC #pragma acc parallel loop independent gang vector #else <LOOP-START>for (int ip = 0; ip < np; ip++) a[ip] = help[ip]; /* Free... */ #ifdef _OPENACC #pragma acc exit data delete(help) free(help); } /*******************************************************************...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
ERRMSG("MPTRAC was compiled without cmultiscale compression!"); #endif } /* Copy data... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) for (int ip = 0; ip < met->np; ip++) { var[ix][iy][ip] = help[ARRAY_3D(ix, iy, met->ny, ip, met->np)]; if (var[ix][iy][ip]...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
... */ const double pfac = 1.01439, dz0 = RI / MA / G0 * log(pfac); /* Loop over columns... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Get potential temperature and water vapor at lowest 50 hPa... */ int n = 0; double h2o = 0, t, theta = 0; ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
T_CLOUD", "METPROC", NVTX_READ); LOG(2, "Calculate cloud data..."); /* Loop over columns... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Init... */ met->pct[ix][iy] = NAN; met->pcb[ix][iy] = NAN; met->cl[ix][iy] = 0; /* Loop over ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
(met->lat[1] - met->lat[0])); sy = MIN(MAX(1, sy), met->ny / 2); /* Calculate background... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) { for (int iy = 0; iy < met->ny; iy++) { /* Calculate Cartesian coordinates... */ double x0[3]; geo2cart(0.0, met->lon[ix], met->lat[iy], x0); ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(3)
100
x][iy][ip] /= wsum; help->w[ix][iy][ip] /= wsum; } } } /* Subtract background... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) for (int ip = 0; ip < met->np; ip++) { met->t[ix][iy][ip] -= help->t[ix][iy][ip]; met->u[ix][iy][ip] -= help->u[ix][iy][ip...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
OLATE", "METPROC", NVTX_READ); LOG(2, "Extrapolate meteo data..."); /* Loop over columns... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Find lowest valid data point... */ int ip0; for (ip0 = met->np - 1; ip0 >= 0; ip0--) if (!isfinite(met->t...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
ROC", NVTX_READ); LOG(2, "Calculate geopotential heights..."); /* Calculate log pressure... */ <LOOP-START>for (int ip = 0; ip < met->np; ip++) logp[ip] = log(met->p[ip]); /* Apply hydrostatic equation to calculate geopotential heights... */ #pragma omp parallel for default(shared) collapse(2) for (int ix...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
ogp[ip] = log(met->p[ip]); /* Apply hydrostatic equation to calculate geopotential heights... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Get surface height and pressure... */ double zs = met->zs[ix][iy]; double lnps = log(met->ps[ix][iy]); ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
6; dy = 4; } } /* Calculate weights for smoothing... */ float ws[dx + 1][dy + 1]; <LOOP-START>for (int ix = 0; ix <= dx; ix++) for (int iy = 0; iy < dy; iy++) ws[ix][iy] = (1.0f - (float) ix / (float) dx) * (1.0f - (float) iy / (float) dy); /* Copy data... */ #pragma omp parallel for def...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(3)
100
][iy] = (1.0f - (float) ix / (float) dx) * (1.0f - (float) iy / (float) dy); /* Copy data... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) for (int ip = 0; ip < met->np; ip++) help[ip][ix][iy] = met->z[ix][iy][ip]; /* Horizontal smoothing... */ #pragma omp pa...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(3)
100
p = 0; ip < met->np; ip++) help[ip][ix][iy] = met->z[ix][iy][ip]; /* Horizontal smoothing... */ <LOOP-START>for (int ip = 0; ip < met->np; ip++) for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { float res = 0, wsum = 0; int iy0 = MAX(iy - dy + 1, 0); int iy1 = MIN(iy + dy - 1,...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
, "rh", "RH", NULL, NULL, ctl, met, met->h2o, 0.01f)) WARN("Cannot read relative humidity!"); <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) for (int ip = 0; ip < met->np; ip++) { double pw = met->h2o[ix][iy][ip] * PSAT(met->t[ix][iy][ip]); met->h2o[ix][iy][ip] ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) private(aux,p) collapse(2)
100
; LOG(2, "Interpolate meteo data to pressure levels: %s", varname); /* Loop over columns... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Copy pressure profile... */ for (int ip = 0; ip < met->np; ip++) p[ip] = met->pl[ix][iy][ip]; /* Interpo...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
, NVTX_READ); LOG(2, "Make zeta profiles monotone..."); /* Create monotone zeta profiles... */ <LOOP-START>for (int i = 0; i < met->nx; i++) for (int j = 0; j < met->ny; j++) { int k = 1; while (k < met->npl) { /* Check if there is an inversion at level k... */ if ((met->zetal[i][j][k - 1] >= met...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
. */ k = k + l; } else { k++; } } } /* Create monotone pressure profiles... */ <LOOP-START>for (int i = 0; i < met->nx; i++) for (int j = 0; j < met->ny; j++) { int k = 1; while (k < met->npl) { /* Check if there is an inversion at level k... */ if ((met->pl[i][j][k - 1] <= met->p...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) num_threads(12)
100
SG("Meteo data layout not implemented for packed netCDF files!"); /* Copy and check data... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { if (init) dest[ix][iy] = 0; short aux = help[ARRAY_2D(iy, ix, met->nx)]; if ((fillval == 0 || aux != fillval) && (m...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) num_threads(12)
100
... */ if (ctl->met_convention == 0) { /* Copy and check data (ordering: lat, lon)... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { if (init) dest[ix][iy] = 0; float aux = help[ARRAY_2D(iy, ix, met->nx)]; if ((fillval == 0 || aux != fillval) ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) num_threads(12)
100
dest[ix][iy] = NAN; } } else { /* Copy and check data (ordering: lon, lat)... */ <LOOP-START>for (int iy = 0; iy < met->ny; iy++) for (int ix = 0; ix < met->nx; ix++) { if (init) dest[ix][iy] = 0; float aux = help[ARRAY_2D(ix, iy, met->ny)]; if ((fillval == 0 || aux != fillval) ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) num_threads(12)
100
SG("Meteo data layout not implemented for packed netCDF files!"); /* Copy and check data... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) for (int ip = 0; ip < met->np; ip++) { short aux = help[ARRAY_3D(ip, iy, met->ny, ix, met->nx)]; if ((fillval == 0 || aux...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) num_threads(12)
100
/ if (ctl->met_convention == 0) { /* Copy and check data (ordering: lev, lat, lon)... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) for (int ip = 0; ip < met->np; ip++) { float aux = help[ARRAY_3D(ip, iy, met->ny, ix, met->nx)]; if ((fillval == 0 || au...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) num_threads(12)
100
ix][iy][ip] = NAN; } } else { /* Copy and check data (ordering: lon, lat, lev)... */ <LOOP-START>for (int ip = 0; ip < met->np; ip++) for (int iy = 0; iy < met->ny; iy++) for (int ix = 0; ix < met->nx; ix++) { float aux = help[ARRAY_3D(ix, iy, met->ny, ip, met->np)]; if ((fillval == 0 || au...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
012)... */ const double rib_crit = 0.25, dz = 0.05, umin = 5.0; /* Loop over grid points... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Set bottom level of PBL... */ double pbl_bot = met->ps[ix][iy] + DZ2DP(dz, met->ps[ix][iy]); /* Find lowe...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
->lon[met->nx - 2] + met->lon[1] - met->lon[0]; /* Loop over latitudes and pressure levels... */ <LOOP-START>for (int iy = 0; iy < met->ny; iy++) { met->ps[met->nx - 1][iy] = met->ps[0][iy]; met->zs[met->nx - 1][iy] = met->zs[0][iy]; met->ts[met->nx - 1][iy] = met->ts[0][iy]; met->us[met->nx - 1][iy]...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
0) sign = -1; /* Look-up table of cosinus and sinus... */ double clon[EX], slon[EX]; <LOOP-START>for (int ix = 0; ix < met->nx; ix++) { clon[ix] = cos(sign * met->lon[ix] / 180. * M_PI); slon[ix] = sin(sign * met->lon[ix] / 180. * M_PI); }<LOOP-END> <OMP-START>#pragma omp parallel for def...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
_PI); slon[ix] = sin(sign * met->lon[ix] / 180. * M_PI); } /* Loop over levels... */ <LOOP-START>for (int ip = 0; ip < met->np; ip++) { /* Transform 89 degree u and v winds into Cartesian coordinates and take the mean... */ double vel89x = 0, vel89y = 0; for (int ix = 0; ix < met->nx; ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
ET_PV", "METPROC", NVTX_READ); LOG(2, "Calculate potential vorticity..."); /* Set powers... */ <LOOP-START>for (int ip = 0; ip < met->np; ip++) pows[ip] = pow(1000. / met->p[ip], 0.286); /* Loop over grid points... */ #pragma omp parallel for default(shared) for (int ix = 0; ix < met->nx; ix++) { /* ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
p < met->np; ip++) pows[ip] = pow(1000. / met->p[ip], 0.286); /* Loop over grid points... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) { /* Set indices... */ int ix0 = MAX(ix - 1, 0); int ix1 = MIN(ix + 1, met->nx - 1); /* Loop over grid points... */ for (int iy = 0; iy < met->ny; iy...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
udy / cr + vort) + dvdp * dtdx - dudp * dtdy)); } } } /* Fix for polar regions... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int ip = 0; ip < met->np; ip++) { met->pv[ix][0][ip] = met->pv[ix][1][ip] = met->pv[ix][2][ip]; met->pv[ix][met->ny - 1][ip] = met->pv[ix][met->ny ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
, "METPROC", NVTX_READ); LOG(2, "Calculate total column ozone..."); /* Loop over columns... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Integrate... */ double cd = 0; for (int ip = 1; ip < met->np; ip++) if (met->p[ip - 1] <= met->ps[ix][iy]...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
C", NVTX_READ); LOG(2, "Calculate tropopause..."); /* Get altitude and pressure profiles... */ <LOOP-START>for (int iz = 0; iz < met->np; iz++) z[iz] = Z(met->p[iz]); #pragma omp parallel for default(shared) for (int iz = 0; iz <= 190; iz++) { z2[iz] = 4.5 + 0.1 * iz; p2[iz] = P(z2[iz]); }<LOOP-END...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
omp parallel for default(shared) for (int iz = 0; iz < met->np; iz++) z[iz] = Z(met->p[iz]); <LOOP-START>for (int iz = 0; iz <= 190; iz++) { z2[iz] = 4.5 + 0.1 * iz; p2[iz] = P(z2[iz]); }<LOOP-END> <OMP-START>#pragma omp parallel for default(shared)<OMP-END>
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
iz; p2[iz] = P(z2[iz]); } /* Do not calculate tropopause... */ if (ctl->met_tropo == 0) <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) met->pt[ix][iy] = NAN; /* Use tropopause climatology... */ else if (ctl->met_tropo == 1) { #pragma omp parallel for defaul...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
+) met->pt[ix][iy] = NAN; /* Use tropopause climatology... */ else if (ctl->met_tropo == 1) { <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) met->pt[ix][iy] = (float) clim_tropo(clim, met->time, met->lat[iy]); } /* Use cold point... */ else if (ctl->met_tropo =...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) private(t,t2) collapse(2)
100
} /* Use cold point... */ else if (ctl->met_tropo == 2) { /* Loop over grid points... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Interpolate temperature profile... */ for (int iz = 0; iz < met->np; iz++) t[iz] = met->t[ix][iy][iz]; spline(z, t, ...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) private(t,t2) collapse(2)
100
... */ else if (ctl->met_tropo == 3 || ctl->met_tropo == 4) { /* Loop over grid points... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Interpolate temperature profile... */ int iz; for (iz = 0; iz < met->np; iz++) t[iz] = met->t[ix][iy][iz]; spline(z...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) private(pv,pv2,th,th2) collapse(2)
100
se dynamical tropopause... */ else if (ctl->met_tropo == 5) { /* Loop over grid points... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { /* Interpolate potential vorticity profile... */ for (int iz = 0; iz < met->np; iz++) pv[iz] = met->pv[ix][iy][iz]; spl...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
calculate tropopause!"); /* Interpolate temperature, geopotential height, and water vapor... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) { double h2ot, tt, zt; INTPOL_INIT; intpol_met_space_3d(met, met->t, met->pt[ix][iy], met->lon[ix], met->la...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
ouble dlat = (ctl->grid_lat1 - ctl->grid_lat0) / ctl->grid_ny; /* Set vertical coordinates... */ <LOOP-START>for (int iz = 0; iz < ctl->grid_nz; iz++) { z[iz] = ctl->grid_z0 + dz * (iz + 0.5); press[iz] = P(z[iz]); }<LOOP-END> <OMP-START>#pragma omp parallel for default(shared)<OMP-END>
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
.. */ for (int ix = 0; ix < ctl->grid_nx; ix++) lon[ix] = ctl->grid_lon0 + dlon * (ix + 0.5); <LOOP-START>for (int iy = 0; iy < ctl->grid_ny; iy++) { lat[iy] = ctl->grid_lat0 + dlat * (iy + 0.5); area[iy] = dlat * dlon * SQR(RE * M_PI / 180.) * cos(lat[iy] * M_PI / 180.); }<LOOP-END> <OMP-START>#p...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
e t0 = t - 0.5 * ctl->dt_mod; double t1 = t + 0.5 * ctl->dt_mod; /* Get grid box indices... */ <LOOP-START>for (int ip = 0; ip < atm->np; ip++) { ixs[ip] = (int) ((atm->lon[ip] - ctl->grid_lon0) / dlon); iys[ip] = (int) ((atm->lat[ip] - ctl->grid_lat0) / dlat); izs[ip] = (int) ((Z(atm->p[ip]) - ctl->gr...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared)
100
ernel * atm->q[iq][ip]); } } /* Calculate column density and volume mixing ratio... */ <LOOP-START>for (int ix = 0; ix < ctl->grid_nx; ix++) for (int iy = 0; iy < ctl->grid_ny; iy++) for (int iz = 0; iz < ctl->grid_nz; iz++) { /* Get grid index... */ int idx = ARRAY_3D(ix, iy, ctl->grid_ny, iz...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) collapse(2)
100
) { float *help; /* Allocate... */ ALLOC(help, float, EX * EY * EP); /* Copy data... */ <LOOP-START>for (int ix = 0; ix < met->nx; ix++) for (int iy = 0; iy < met->ny; iy++) for (int ip = 0; ip < met->np; ip++) help[ARRAY_3D(ix, iy, met->ny, ip, met->np)] = var[ix][iy][ip]; /* Write uncompress...
slcs-jsc/mptrac/src/mptrac.c
#pragma omp parallel for default(shared) reduction(+:mass,np)
100
le_dz); /* Init... */ double mass = 0; int np = 0; /* Loop over air parcels... */ <LOOP-START>for (int ip = 0; ip < atm->np; ip++) { /* Check time... */ if (atm->time[ip] < t0 || atm->time[ip] > t1) continue; /* Check latitude... */ if (fabs(rlat[i] - atm->lat[ip]) > dlat) ...
openucx/ucx/test/gtest/ucp/test_ucp_tag_mt.cc
#pragma omp parallel for
100
nd_data[i] = 0xdeadbeefdeadbeef + 10 * i; recv_data[i] = 0; } #if _OPENMP && ENABLE_MT <LOOP-START>for (int i = 0; i < num_threads; i++) { ucs_status_t status; int worker_index = 0; if (get_variant_thread_type() == MULTI_THREAD_CONTEXT) { worker_index = i; } ...
openucx/ucx/test/gtest/ucp/test_ucp_rma_mt.cc
#pragma omp parallel for
100
> rkey; rkey.resize(num_threads); /* test parallel rkey unpack */ #if _OPENMP && ENABLE_MT <LOOP-START>for (int i = 0; i < num_threads; i++) { int worker_index = 0; if (get_variant_thread_type() == MULTI_THREAD_CONTEXT) { worker_index = i; } ucs_status_t status = ucp...
openucx/ucx/test/gtest/ucp/test_ucp_rma_mt.cc
#pragma omp parallel for
100
_data[i] = 0xdeadbeefdeadbeef + 10 * i; target_data[i] = 0; } #if _OPENMP && ENABLE_MT <LOOP-START>for (int i = 0; i < num_threads; i++) { int worker_index = 0; if (get_variant_thread_type() == MULTI_THREAD_CONTEXT) { worker_index = i; } void* req = ucp_put_nb(...
openucx/ucx/test/gtest/ucp/test_ucp_rma_mt.cc
#pragma omp parallel for
100
_data[i] = 0xdeadbeefdeadbeef + 10 * i; target_data[i] = 0; } #if _OPENMP && ENABLE_MT <LOOP-START>for (int i = 0; i < num_threads; i++) { ucs_status_t status; int worker_index = 0; if (get_variant_thread_type() == MULTI_THREAD_CONTEXT) worker_index = i; status...
openucx/ucx/test/gtest/ucp/test_ucp_rma_mt.cc
#pragma omp parallel for
100
_data[i] = 0; target_data[i] = 0xdeadbeefdeadbeef + 10 * i; } #if _OPENMP && ENABLE_MT <LOOP-START>for (int i = 0; i < num_threads; i++) { int worker_index = 0; if (get_variant_thread_type() == MULTI_THREAD_CONTEXT) { worker_index = i; } void *req = ucp_get_nb(...
openucx/ucx/test/gtest/ucp/test_ucp_rma_mt.cc
#pragma omp parallel for
100
_data[i] = 0; target_data[i] = 0xdeadbeefdeadbeef + 10 * i; } #if _OPENMP && ENABLE_MT <LOOP-START>for (int i = 0; i < num_threads; i++) { ucs_status_t status; int worker_index = 0; if (get_variant_thread_type() == MULTI_THREAD_CONTEXT) { worker_index = i; } ...
openucx/ucx/test/gtest/ucp/test_ucp_rma_mt.cc
#pragma omp parallel for
100
er_index); EXPECT_EQ(orig_data[i], target_data[i]); } #endif #if _OPENMP && ENABLE_MT <LOOP-START>for (int i = 0; i < num_threads; i++) { ucp_rkey_destroy(rkey[i]); }<LOOP-END> <OMP-START>#pragma omp parallel for<OMP-END>
HPCL/benchmarks/kernels/STREAM/stream.c
#pragma omp parallel for
100
rintf ("Number of Threads counted = %i\n",k); #endif /* Get initial value for system clock. */ <LOOP-START>for (j=0; j<STREAM_ARRAY_SIZE; j++) { a[j] = 1.0; b[j] = 2.0; c[j] = 0.0; }<LOOP-END> <OMP-START>#pragma omp parallel for<OMP-END>
HPCL/benchmarks/kernels/STREAM/stream.c
#pragma omp parallel for
100
rity appears to be " "less than one microsecond.\n"); quantum = 1; } t = mysecond(); <LOOP-START>for (j = 0; j < STREAM_ARRAY_SIZE; j++) a[j] = 2.0E0 * a[j]; t = 1.0E6 * (mysecond() - t); printf("Each test below will take on the order" " of %d microseconds.\n", (int) t ); printf(" (= %...
HPCL/benchmarks/kernels/STREAM/stream.c
#pragma omp parallel for
100
(k=0; k<NTIMES; k++) { times[0][k] = mysecond(); #ifdef TUNED tuned_STREAM_Copy(); #else <LOOP-START>for (j=0; j<STREAM_ARRAY_SIZE; j++) c[j] = a[j]; times[0][k] = mysecond() - times[0][k]; times[1][k] = mysecond(); #ifdef TUNED tuned_STREAM_Scale(scalar); #else #pragma omp parallel for fo...
HPCL/benchmarks/kernels/STREAM/stream.c
#pragma omp parallel for
100
- times[0][k]; times[1][k] = mysecond(); #ifdef TUNED tuned_STREAM_Scale(scalar); #else <LOOP-START>for (j=0; j<STREAM_ARRAY_SIZE; j++) b[j] = scalar*c[j]; times[1][k] = mysecond() - times[1][k]; times[2][k] = mysecond(); #ifdef TUNED tuned_STREAM_Add(); #else #pragma omp parallel for for...
HPCL/benchmarks/kernels/STREAM/stream.c
#pragma omp parallel for
100
second() - times[1][k]; times[2][k] = mysecond(); #ifdef TUNED tuned_STREAM_Add(); #else <LOOP-START>for (j=0; j<STREAM_ARRAY_SIZE; j++) c[j] = a[j]+b[j]; times[2][k] = mysecond() - times[2][k]; times[3][k] = mysecond(); #ifdef TUNED tuned_STREAM_Triad(scalar); #else #pragma omp parallel fo...
HPCL/benchmarks/kernels/STREAM/stream.c
#pragma omp parallel for
100
- times[2][k]; times[3][k] = mysecond(); #ifdef TUNED tuned_STREAM_Triad(scalar); #else <LOOP-START>for (j=0; j<STREAM_ARRAY_SIZE; j++) a[j] = b[j]+scalar*c[j]; times[3][k] = mysecond() - times[3][k]; } #ifdef USE_LIKWID LIKWID_MARKER_CLOSE; /* --- SUMMARY --- */ for (k=1; k<NTIMES; k+...
HPCL/benchmarks/kernels/mm_blocks/linear_algebra.c
#pragma omp parallel for
100
anspose of mat_a void transpose_matrix(double** mat_a, int rows_a, int cols_a, double** mat_c) { <LOOP-START>for (int i = 0; i < rows_a; i++) { for (int j = 0; j < cols_a; j++) { mat_c[j][i] = mat_a[i][j]; } }<LOOP-END> <OMP-START>#pragma omp parallel for<OMP-END>
HPCL/benchmarks/kernels/mm_blocks/linear_algebra_separate.c
#pragma omp parallel for
100
e of mat_a // void transpose_matrix(double** mat_a, int rows_a, int cols_a, double** mat_c) { // <LOOP-START>// for (int i = 0; i < rows_a; i++) { // for (int j = 0; j < cols_a; j++) { // mat_c[j][i] = mat_a[i][j]; // } // }<LOOP-END> <OMP-START>#pragma omp parallel for<OMP-END>
HPCL/benchmarks/kernels/mm_blocks/test_linear_algebra.c
#pragma omp parallel for private(i,j,k)
100
*)); for (i=0; i<rows_a; i++) V[i] = (double*)aligned_alloc(256,cols_b*sizeof(double)+GAP); // <LOOP-START>// for (i=0; i<size; i++) { // for (j=0; j<size; j++) { // A[i][j] = (double)rand()/(double)(RAND_MAX); // B[i][j] = (double)rand()/(double)(RAND_MAX); // C[i][j] = 0.0; // V[i][j] = 0.0; ...
HPCL/benchmarks/kernels/mm_blocks/test_linear_algebra.c
#pragma omp parallel for private(i,j,k)
100
] = (double)rand()/(double)(RAND_MAX); // C[i][j] = 0.0; // V[i][j] = 0.0; // } // } <LOOP-START>for (i=0; i<rows_a; i++) for (j=0; j<cols_a; j++) A[i][j] = (double)rand()/(double)(RAND_MAX); #pragma omp parallel for private(i,j,k) for (i=0; i<cols_a; i++) for (j=0; j<cols_b; j++) B[i][j...
HPCL/benchmarks/kernels/mm_blocks/test_linear_algebra.c
#pragma omp parallel for private(i,j,k)
100
(i=0; i<rows_a; i++) for (j=0; j<cols_a; j++) A[i][j] = (double)rand()/(double)(RAND_MAX); <LOOP-START>for (i=0; i<cols_a; i++) for (j=0; j<cols_b; j++) B[i][j] = (double)rand()/(double)(RAND_MAX); #pragma omp parallel for private(i,j,k) for (i=0; i<rows_a; i++) for (j=0; j<cols_b; j++) C[i][j...
HPCL/benchmarks/kernels/mm_blocks/test_linear_algebra.c
#pragma omp parallel for private(i,j,k)
100
(i=0; i<cols_a; i++) for (j=0; j<cols_b; j++) B[i][j] = (double)rand()/(double)(RAND_MAX); <LOOP-START>for (i=0; i<rows_a; i++) for (j=0; j<cols_b; j++) C[i][j] = 0.0; #pragma omp parallel for private(i,j,k) for (i=0; i<rows_a; i++) for (j=0; j<cols_b; j++) V[i][j] = 0.0; transpose_matrix(B...
HPCL/benchmarks/kernels/mm_blocks/test_linear_algebra.c
#pragma omp parallel for private(i,j,k)
100
llel for private(i,j,k) for (i=0; i<rows_a; i++) for (j=0; j<cols_b; j++) C[i][j] = 0.0; <LOOP-START>for (i=0; i<rows_a; i++) for (j=0; j<cols_b; j++) V[i][j] = 0.0; transpose_matrix(B, cols_a, cols_b, B_T); //fill validation matrix based on naive implementation if (validate) { printf("pro...
HPCL/benchmarks/kernels/mm_blocks/test_linear_algebra.c
#pragma omp parallel for
100
= omp_get_wtime(); if (validate) { printf("Checking result...\n"); fflush(stdout); // <LOOP-START>// #pragma omp parallel for reduction(+:ee) private(i,j) // for (i=0; i<size; i++) { // for (j=0; j<size; j++) { // ee += (C[i][j] - V[i][j])*(C[i][j] - V[i][j]); // } // }<LOOP-EN...
HPCL/benchmarks/kernels/mm_blocks/test_linear_algebra.c
#pragma omp parallel for reduction(+:ee) private(i,j)
100
date) { printf("Checking result...\n"); fflush(stdout); // #pragma omp parallel for // <LOOP-START>// for (i=0; i<size; i++) { // for (j=0; j<size; j++) { // ee += (C[i][j] - V[i][j])*(C[i][j] - V[i][j]); // } // }<LOOP-END> <OMP-START>#pragma omp parallel for reduction(+:ee) privat...
HPCL/benchmarks/kernels/mm_blocks/matrix_mul_validated.c
#pragma omp parallel for private(i,j,k)
100
double** mat_b, int cols_b, double** mat_c) { int i, j, k; <LOOP-START>for (i = 0; i < rows_a; i++) { for (j = 0; j < cols_b; j++) { mat_c[i][j] = 0; for (k = 0; k < cols_a; k++) { mat_c[i][j] += mat_a[i][k] * mat_b[j][k]; } } }<LOOP-END> <OM...
HPCL/benchmarks/kernels/shingles/fp_crunch/fp_utils.c
#pragma omp parallel for
100
it_arrays(fa, fb, fc); // #pragma unroll(DATA_SIZE) for( long t = 0; t < n_trials; t++ ){ <LOOP-START>for (int i = 0; i < DATA_SIZE; i++) { fa[i] += fc[i] * fb[i]; }<LOOP-END> <OMP-START>#pragma omp parallel for<OMP-END>
HPCL/benchmarks/kernels/shingles/fp_crunch/fp_utils.c
#pragma omp parallel for shared(fa) reduction(+:norm)
100
nt i = 0; i < DATA_SIZE; i++) { fa[i] += fc[i] * fb[i]; } } // norm for validation <LOOP-START>for (int i = 0; i < DATA_SIZE; i++) { norm += fa[i] * fa[i]; }<LOOP-END> <OMP-START>#pragma omp parallel for shared(fa) reduction(+:norm)<OMP-END>