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estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/envlock_check_51934790.json

@@ -0,0 +1,17 @@
+{
+ "compared_keys": 165,
+ "drift": {},
+ "host": "cn604-07",
+ "lock": "/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json",
+ "lock_of_record_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe",
+ "lock_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe",
+ "parts": [
+  "envs",
+  "modules",
+  "ext"
+ ],
+ "schema": "bench_h2h.envlock_gate/1",
+ "slurm_job_id": "51934790",
+ "status": "PASS",
+ "utc": "20260916T112738Z"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/fit_spec.json

@@ -0,0 +1,24 @@
+{
+ "K": 1,
+ "arm": "EQ",
+ "config_id": "release_default",
+ "data_arm": "CLEAN",
+ "dataset": "v2_a1_AGRI_X10_1K",
+ "g": 1,
+ "method": "fitcoal",
+ "mu": 1.2500000146076218e-08,
+ "mu_source": "true",
+ "n": 32,
+ "options": {},
+ "r": 9.99999993922529e-09,
+ "regions": [
+  "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_AGRI_X10_1K/r00000001/n32"
+ ],
+ "rep": 1,
+ "schema": "bench_h2h.fitspec.v1",
+ "settings": {
+  "file": "config/tool_settings_v2.json",
+  "method_call_sha256": "e68a7f904e40c2cf6e2a94be190adc3a9b72639ac15f3b7a3dc441376b37cd71"
+ },
+ "stage": "v2"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/fitcoal/afs.txt

@@ -0,0 +1 @@
+26415 8441 5148 3865 2961 2477 2059 1782 1570 1390 1357 1295 1238 1136 966 886 841 815 708 727 738 665 620 596 536 534 518 475 445 443 402 420 437 432 443 351 370 400 332 365 338 330 343 347 296 322 290 343 300 309 288 339 270 259 248 283 265 242 307 304 271 252 229

estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/fitcoal/decoder.cmd

@@ -0,0 +1 @@
+java -Xmx6g -XX:ParallelGCThreads=2 -XX:CICompilerCount=2 -cp /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/FitCoal.jar FitCoal.calculate.SinglePopDecoder -table /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/tables_n64 -input /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g1/n32/fitcoal/afs.txt -output /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g1/n32/fitcoal/output -generationTime 1 -mutationRate 1.2500000146076218e-05 -omitEndSFS 0 -randSeed 1 -genomeLength 30000.0 

estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/fitcoal/decoder.out

@@ -0,0 +1,23 @@
+Data:1
+numOfIntervals = 1
+standardTime: 0.0 generations: 0.00 N: 11,614 changeTypes: 0
+maxLogL = -3069.513298938472
+
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 82,925 changeTypes: 2
+standardTime: 0.0226907246929438 generations: 1072.82 N: 9,742 changeTypes: 0
+maxLogL = -341.3162001067067
+
+numOfIntervals = 3
+standardTime: 0.0 generations: 0.00 N: 91,692 changeTypes: 1
+standardTime: 0.002681852934870868 generations: 491.81 N: 12,222 changeTypes: 1
+standardTime: 0.05618854271440248 generations: 1799.73 N: 9,671 changeTypes: 0
+maxLogL = -337.58421339073584
+
+******** Best: ********
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 82,925 changeTypes: 2
+standardTime: 0.0226907246929438 generations: 1072.82 N: 9,742 changeTypes: 0
+maxLogL = -341.3162001067067
+
+computing time = 141.25 seconds

estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/fitcoal/output.txt

@@ -0,0 +1,4 @@
+year	popSize
+2000	9742
+4000000	9742
+

estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/fitcoal/trunc.txt

@@ -0,0 +1,7 @@
+Data: 1
+n = 64
+To avoid the effects of positive selection and population structure, the lifted tail of SFS can be removed or collapsed.
+
+The number of SFS types to be truncated or collapsed: 0 (recommended)
+The proportion of truncated or collapsed SFS types: 0.0
+

estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/receipt_51934790.json

@@ -0,0 +1,18 @@
+{
+ "cpus_per_task": "2",
+ "cuda_visible_devices": null,
+ "curve_sha256": "32f50b11a37c5301d683cc34c8354f7d0974e7ffca39bd961c2212320923f57d",
+ "elapsed_s": 202,
+ "failure_sha256": null,
+ "host": "cn604-07",
+ "schema": "bench_h2h.tool_receipt.v1",
+ "script": "/ibex/project/c2041/hany0c/bench_h2h_20260915/tool/slurm/tool_fitcoal.slurm",
+ "script_sha256": "87c2d0328db12d226681cafe52b7519111faea239ce6912e8357841e343be0d4",
+ "slurm_job_id": "51934790",
+ "slurm_job_name": "bh2h-fitcoal",
+ "spec_sha256": "e1a318a7cee6e1dae93a419868744ec314bde1b52262cd4cbba7f194a31e4091",
+ "state": "OK",
+ "timelimit_s": 28800,
+ "tool_rc": 0,
+ "utc": "2026-09-16T11:30:12Z"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g1/n32/submissions.jsonl

@@ -0,0 +1 @@
+{"argv": ["sbatch", "--parsable", "--cpus-per-task=2", "--mem=16G", "--time=08:00:00", "--export=ALL,BENCH_ENVLOCK=/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json", "/ibex/project/c2041/hany0c/bench_h2h_20260915/tool/slurm/tool_fitcoal.slurm", "/ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g1/n32/fit_spec.json"], "caps": {"account_jobs": 1900, "cores": 1000, "gpus": 20, "pending": 1500}, "controller_sha256": "3cf3bf07c06b386601d9c513c756b91a8431e0d1633ddb04702b524e0f37b969", "dependency": null, "envlock": "/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json", "envlock_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe", "export_receipts": ["/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_AGRI_X10_1K/receipts/export_51933133.json"], "job_id": "51934790", "mu_provenance": "export meta.json true_mu mean (1 regions)", "request": "/ibex/project/c2041/hany0c/bench_h2h_20260915/v2/driver/requests/v2_a1_AGRI_X10_1K/fitcoal_g1.json", "request_sha256": "525f5f0776a3fc8ef30d3f6c3c32f819684c489cb085a94a8a357956a7cda6da", "resources": {"cpus": 2, "gpus": 0, "mem": "16G", "time": "08:00:00"}, "rows": [1], "schema": "bench_h2h.fit_submission.v1", "script_sha256": "87c2d0328db12d226681cafe52b7519111faea239ce6912e8357841e343be0d4", "spec_sha256": "e1a318a7cee6e1dae93a419868744ec314bde1b52262cd4cbba7f194a31e4091", "stage": "v2", "usage_before": {"account_jobs": 156, "bench_cores": 320, "bench_gpus": 20, "bench_jobs": 85, "bench_pending": 19, "never_startable_pending": 0, "throttle_held_not_counted": 0}, "utc": "2026-09-16T11:26:48Z"}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/envlock_check_51934791.json

@@ -0,0 +1,17 @@
+{
+ "compared_keys": 165,
+ "drift": {},
+ "host": "cn604-15",
+ "lock": "/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json",
+ "lock_of_record_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe",
+ "lock_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe",
+ "parts": [
+  "envs",
+  "modules",
+  "ext"
+ ],
+ "schema": "bench_h2h.envlock_gate/1",
+ "slurm_job_id": "51934791",
+ "status": "PASS",
+ "utc": "20260916T112658Z"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/fit_spec.json

@@ -0,0 +1,24 @@
+{
+ "K": 1,
+ "arm": "EQ",
+ "config_id": "release_default",
+ "data_arm": "CLEAN",
+ "dataset": "v2_a1_AGRI_X10_1K",
+ "g": 2,
+ "method": "fitcoal",
+ "mu": 1.2500000146076218e-08,
+ "mu_source": "true",
+ "n": 32,
+ "options": {},
+ "r": 9.99999993922529e-09,
+ "regions": [
+  "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_AGRI_X10_1K/r00000002/n32"
+ ],
+ "rep": 2,
+ "schema": "bench_h2h.fitspec.v1",
+ "settings": {
+  "file": "config/tool_settings_v2.json",
+  "method_call_sha256": "e68a7f904e40c2cf6e2a94be190adc3a9b72639ac15f3b7a3dc441376b37cd71"
+ },
+ "stage": "v2"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/fitcoal/afs.txt

@@ -0,0 +1 @@
+27142 8647 5058 3771 3058 2480 2158 1863 1758 1479 1422 1200 1193 1095 969 870 881 800 738 730 699 642 616 638 557 581 506 497 538 434 500 444 438 416 470 383 402 438 408 424 363 341 382 341 346 317 323 359 319 337 350 314 282 287 318 332 283 303 258 271 269 290 250

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/fitcoal/decoder.cmd

@@ -0,0 +1 @@
+java -Xmx6g -XX:ParallelGCThreads=2 -XX:CICompilerCount=2 -cp /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/FitCoal.jar FitCoal.calculate.SinglePopDecoder -table /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/tables_n64 -input /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g2/n32/fitcoal/afs.txt -output /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g2/n32/fitcoal/output -generationTime 1 -mutationRate 1.2500000146076218e-05 -omitEndSFS 0 -randSeed 2 -genomeLength 30000.0 

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/fitcoal/decoder.out

@@ -0,0 +1,23 @@
+Data:1
+numOfIntervals = 1
+standardTime: 0.0 generations: 0.00 N: 11,925 changeTypes: 0
+maxLogL = -3134.416889269254
+
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 54,884 changeTypes: 1
+standardTime: 0.006814006109803992 generations: 747.96 N: 10,052 changeTypes: 0
+maxLogL = -333.6306095088248
+
+numOfIntervals = 3
+standardTime: 0.0 generations: 0.00 N: 86,752 changeTypes: 2
+standardTime: 0.02362091232669031 generations: 1133.30 N: 9,738 changeTypes: 1
+standardTime: 1.9989993429851771 generations: 39604.05 N: 12,085 changeTypes: 0
+maxLogL = -322.8422597307465
+
+******** Best: ********
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 54,884 changeTypes: 1
+standardTime: 0.006814006109803992 generations: 747.96 N: 10,052 changeTypes: 0
+maxLogL = -333.6306095088248
+
+computing time = 146.73 seconds

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/fitcoal/output.txt

@@ -0,0 +1,4 @@
+year	popSize
+2000	10052
+4000000	10052
+

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/fitcoal/trunc.txt

@@ -0,0 +1,7 @@
+Data: 1
+n = 64
+To avoid the effects of positive selection and population structure, the lifted tail of SFS can be removed or collapsed.
+
+The number of SFS types to be truncated or collapsed: 0 (recommended)
+The proportion of truncated or collapsed SFS types: 0.0
+

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/receipt_51934791.json

@@ -0,0 +1,18 @@
+{
+ "cpus_per_task": "2",
+ "cuda_visible_devices": null,
+ "curve_sha256": "3a2f8f8fadf82987a7cba847af3b4906b7037658ec4860c11862859a0647d103",
+ "elapsed_s": 159,
+ "failure_sha256": null,
+ "host": "cn604-15",
+ "schema": "bench_h2h.tool_receipt.v1",
+ "script": "/ibex/project/c2041/hany0c/bench_h2h_20260915/tool/slurm/tool_fitcoal.slurm",
+ "script_sha256": "87c2d0328db12d226681cafe52b7519111faea239ce6912e8357841e343be0d4",
+ "slurm_job_id": "51934791",
+ "slurm_job_name": "bh2h-fitcoal",
+ "spec_sha256": "88e6ee25059f49a3f9ef408235b40b87f111505974ac7ed1fdd4e14a9fa8bc40",
+ "state": "OK",
+ "timelimit_s": 28800,
+ "tool_rc": 0,
+ "utc": "2026-09-16T11:29:35Z"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g2/n32/submissions.jsonl

@@ -0,0 +1 @@
+{"argv": ["sbatch", "--parsable", "--cpus-per-task=2", "--mem=16G", "--time=08:00:00", "--export=ALL,BENCH_ENVLOCK=/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json", "/ibex/project/c2041/hany0c/bench_h2h_20260915/tool/slurm/tool_fitcoal.slurm", "/ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g2/n32/fit_spec.json"], "caps": {"account_jobs": 1900, "cores": 1000, "gpus": 20, "pending": 1500}, "controller_sha256": "3cf3bf07c06b386601d9c513c756b91a8431e0d1633ddb04702b524e0f37b969", "dependency": null, "envlock": "/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json", "envlock_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe", "export_receipts": ["/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_AGRI_X10_1K/receipts/export_51933133.json"], "job_id": "51934791", "mu_provenance": "export meta.json true_mu mean (1 regions)", "request": "/ibex/project/c2041/hany0c/bench_h2h_20260915/v2/driver/requests/v2_a1_AGRI_X10_1K/fitcoal_g2.json", "request_sha256": "1930cd9b9b1a828afad871c1e6737c1598d1bd36e99676a71089def780c6ae8b", "resources": {"cpus": 2, "gpus": 0, "mem": "16G", "time": "08:00:00"}, "rows": [2], "schema": "bench_h2h.fit_submission.v1", "script_sha256": "87c2d0328db12d226681cafe52b7519111faea239ce6912e8357841e343be0d4", "spec_sha256": "88e6ee25059f49a3f9ef408235b40b87f111505974ac7ed1fdd4e14a9fa8bc40", "stage": "v2", "usage_before": {"account_jobs": 157, "bench_cores": 322, "bench_gpus": 20, "bench_jobs": 86, "bench_pending": 19, "never_startable_pending": 0, "throttle_held_not_counted": 0}, "utc": "2026-09-16T11:26:52Z"}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g4/n32/fit_spec.json

@@ -0,0 +1,24 @@
+{
+ "K": 1,
+ "arm": "EQ",
+ "config_id": "release_default",
+ "data_arm": "CLEAN",
+ "dataset": "v2_a1_AGRI_X10_1K",
+ "g": 4,
+ "method": "fitcoal",
+ "mu": 1.2500000146076218e-08,
+ "mu_source": "true",
+ "n": 32,
+ "options": {},
+ "r": 9.99999993922529e-09,
+ "regions": [
+  "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_AGRI_X10_1K/r00000004/n32"
+ ],
+ "rep": 4,
+ "schema": "bench_h2h.fitspec.v1",
+ "settings": {
+  "file": "config/tool_settings_v2.json",
+  "method_call_sha256": "e68a7f904e40c2cf6e2a94be190adc3a9b72639ac15f3b7a3dc441376b37cd71"
+ },
+ "stage": "v2"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g4/n32/fitcoal/afs.txt

@@ -0,0 +1 @@
+26285 8465 5314 3944 3000 2597 2006 1854 1730 1504 1348 1284 1092 1097 1006 943 882 808 777 761 810 692 612 656 590 597 583 628 584 536 465 436 501 496 487 435 390 355 384 368 361 299 381 370 343 307 323 306 310 270 260 334 271 298 284 256 232 264 235 232 276 213 204

estimates/fitcoal/a1/AGRI_X10_1K/K1/g4/n32/fitcoal/decoder.cmd

@@ -0,0 +1 @@
+java -Xmx6g -XX:ParallelGCThreads=2 -XX:CICompilerCount=2 -cp /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/FitCoal.jar FitCoal.calculate.SinglePopDecoder -table /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/tables_n64 -input /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g4/n32/fitcoal/afs.txt -output /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g4/n32/fitcoal/output -generationTime 1 -mutationRate 1.2500000146076218e-05 -omitEndSFS 0 -randSeed 4 -genomeLength 30000.0 

estimates/fitcoal/a1/AGRI_X10_1K/K1/g4/n32/fitcoal/decoder.out

@@ -0,0 +1,23 @@
+Data:1
+numOfIntervals = 1
+standardTime: 0.0 generations: 0.00 N: 11,834 changeTypes: 0
+maxLogL = -2741.9616399537917
+
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 97,919 changeTypes: 2
+standardTime: 0.018341571101470538 generations: 938.79 N: 10,106 changeTypes: 0
+maxLogL = -337.37107374096206
+
+numOfIntervals = 3
+standardTime: 0.0 generations: 0.00 N: 1,152,996 changeTypes: 2
+standardTime: 0.004242223720814924 generations: 530.14 N: 13,991 changeTypes: 1
+standardTime: 0.033121541334423014 generations: 1338.25 N: 10,060 changeTypes: 0
+maxLogL = -334.5179632390111
+
+******** Best: ********
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 97,919 changeTypes: 2
+standardTime: 0.018341571101470538 generations: 938.79 N: 10,106 changeTypes: 0
+maxLogL = -337.37107374096206
+
+computing time = 146.81 seconds

estimates/fitcoal/a1/AGRI_X10_1K/K1/g4/n32/fitcoal/output.txt

@@ -0,0 +1,4 @@
+year	popSize
+2000	10106
+4000000	10106
+

estimates/fitcoal/a1/AGRI_X10_1K/K1/g4/n32/fitcoal/trunc.txt

@@ -0,0 +1,7 @@
+Data: 1
+n = 64
+To avoid the effects of positive selection and population structure, the lifted tail of SFS can be removed or collapsed.
+
+The number of SFS types to be truncated or collapsed: 0 (recommended)
+The proportion of truncated or collapsed SFS types: 0.0
+

estimates/fitcoal/a1/AGRI_X10_1K/K1/g4/n32/receipt_51934798.json

@@ -0,0 +1,18 @@
+{
+ "cpus_per_task": "2",
+ "cuda_visible_devices": null,
+ "curve_sha256": "c4b1bd7ddf13fd3f32e4e12601e0a1bfdec128a3cab5db21aa07c99edaeafc29",
+ "elapsed_s": 164,
+ "failure_sha256": null,
+ "host": "cn604-03",
+ "schema": "bench_h2h.tool_receipt.v1",
+ "script": "/ibex/project/c2041/hany0c/bench_h2h_20260915/tool/slurm/tool_fitcoal.slurm",
+ "script_sha256": "87c2d0328db12d226681cafe52b7519111faea239ce6912e8357841e343be0d4",
+ "slurm_job_id": "51934798",
+ "slurm_job_name": "bh2h-fitcoal",
+ "spec_sha256": "bca2e426d4a2c8b96595c20fb2555c157ad9f46fc2b9815461ef04f6d8e79a63",
+ "state": "OK",
+ "timelimit_s": 28800,
+ "tool_rc": 0,
+ "utc": "2026-09-16T11:29:51Z"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/envlock_check_51934801.json

@@ -0,0 +1,17 @@
+{
+ "compared_keys": 165,
+ "drift": {},
+ "host": "cn604-02",
+ "lock": "/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json",
+ "lock_of_record_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe",
+ "lock_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe",
+ "parts": [
+  "envs",
+  "modules",
+  "ext"
+ ],
+ "schema": "bench_h2h.envlock_gate/1",
+ "slurm_job_id": "51934801",
+ "status": "PASS",
+ "utc": "20260916T112757Z"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/fit_spec.json

@@ -0,0 +1,24 @@
+{
+ "K": 1,
+ "arm": "EQ",
+ "config_id": "release_default",
+ "data_arm": "CLEAN",
+ "dataset": "v2_a1_AGRI_X10_1K",
+ "g": 7,
+ "method": "fitcoal",
+ "mu": 1.2500000146076218e-08,
+ "mu_source": "true",
+ "n": 32,
+ "options": {},
+ "r": 9.99999993922529e-09,
+ "regions": [
+  "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_AGRI_X10_1K/r00000007/n32"
+ ],
+ "rep": 7,
+ "schema": "bench_h2h.fitspec.v1",
+ "settings": {
+  "file": "config/tool_settings_v2.json",
+  "method_call_sha256": "e68a7f904e40c2cf6e2a94be190adc3a9b72639ac15f3b7a3dc441376b37cd71"
+ },
+ "stage": "v2"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/fitcoal/afs.txt

@@ -0,0 +1 @@
+27007 8507 5286 3722 2868 2466 2149 1799 1565 1356 1375 1266 1135 1060 1002 956 894 837 755 756 724 716 652 581 665 557 542 558 503 502 493 423 471 443 398 408 415 348 450 369 402 325 402 344 309 293 328 338 348 293 276 292 302 277 245 276 266 239 257 249 304 251 204

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/fitcoal/decoder.cmd

@@ -0,0 +1 @@
+java -Xmx6g -XX:ParallelGCThreads=2 -XX:CICompilerCount=2 -cp /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/FitCoal.jar FitCoal.calculate.SinglePopDecoder -table /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/tables_n64 -input /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g7/n32/fitcoal/afs.txt -output /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g7/n32/fitcoal/output -generationTime 1 -mutationRate 1.2500000146076218e-05 -omitEndSFS 3 -randSeed 7 -genomeLength 30000.0 

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/fitcoal/decoder.out

@@ -0,0 +1,23 @@
+Data:1
+numOfIntervals = 1
+standardTime: 0.0 generations: 0.00 N: 11,829 changeTypes: 0
+maxLogL = -3140.9418884611555
+
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 97,052 changeTypes: 2
+standardTime: 0.02076467033946912 generations: 1045.34 N: 9,903 changeTypes: 0
+maxLogL = -303.040188812545
+
+numOfIntervals = 3
+standardTime: 0.0 generations: 0.00 N: 83,812 changeTypes: 2
+standardTime: 0.024271443211634304 generations: 1144.74 N: 9,655 changeTypes: 1
+standardTime: 0.431933690956922 generations: 9016.71 N: 10,049 changeTypes: 0
+maxLogL = -300.8977430537859
+
+******** Best: ********
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 97,052 changeTypes: 2
+standardTime: 0.02076467033946912 generations: 1045.34 N: 9,903 changeTypes: 0
+maxLogL = -303.040188812545
+
+computing time = 153.25 seconds

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/fitcoal/output.txt

@@ -0,0 +1,4 @@
+year	popSize
+2000	9903
+4000000	9903
+

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/fitcoal/trunc.txt

@@ -0,0 +1,7 @@
+Data: 1
+n = 64
+To avoid the effects of positive selection and population structure, the lifted tail of SFS can be removed or collapsed.
+
+The number of SFS types to be truncated or collapsed: 3 (recommended)
+The proportion of truncated or collapsed SFS types: 0.047619047619047616
+

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/receipt_51934801.json

@@ -0,0 +1,18 @@
+{
+ "cpus_per_task": "2",
+ "cuda_visible_devices": null,
+ "curve_sha256": "17071e34a2bdae3f801b6b924e54f9d9b696f902286c6fd5c6d23d8de9c75dbd",
+ "elapsed_s": 194,
+ "failure_sha256": null,
+ "host": "cn604-02",
+ "schema": "bench_h2h.tool_receipt.v1",
+ "script": "/ibex/project/c2041/hany0c/bench_h2h_20260915/tool/slurm/tool_fitcoal.slurm",
+ "script_sha256": "87c2d0328db12d226681cafe52b7519111faea239ce6912e8357841e343be0d4",
+ "slurm_job_id": "51934801",
+ "slurm_job_name": "bh2h-fitcoal",
+ "spec_sha256": "8d389fe6ae76bb3fbb59d00ffff54fb2b7b3435c9f27827a242ec48626f90678",
+ "state": "OK",
+ "timelimit_s": 28800,
+ "tool_rc": 0,
+ "utc": "2026-09-16T11:30:39Z"
+}

estimates/fitcoal/a1/AGRI_X10_1K/K1/g7/n32/submissions.jsonl

@@ -0,0 +1 @@
+{"argv": ["sbatch", "--parsable", "--cpus-per-task=2", "--mem=16G", "--time=08:00:00", "--export=ALL,BENCH_ENVLOCK=/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json", "/ibex/project/c2041/hany0c/bench_h2h_20260915/tool/slurm/tool_fitcoal.slurm", "/ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_AGRI_X10_1K/K1/g7/n32/fit_spec.json"], "caps": {"account_jobs": 1900, "cores": 1000, "gpus": 20, "pending": 1500}, "controller_sha256": "3cf3bf07c06b386601d9c513c756b91a8431e0d1633ddb04702b524e0f37b969", "dependency": null, "envlock": "/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json", "envlock_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe", "export_receipts": ["/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_AGRI_X10_1K/receipts/export_51933133.json"], "job_id": "51934801", "mu_provenance": "export meta.json true_mu mean (1 regions)", "request": "/ibex/project/c2041/hany0c/bench_h2h_20260915/v2/driver/requests/v2_a1_AGRI_X10_1K/fitcoal_g7.json", "request_sha256": "d81353f9972cf5a5dd1e24aabf1a01386207f3b812f5d9a38469460284a18307", "resources": {"cpus": 2, "gpus": 0, "mem": "16G", "time": "08:00:00"}, "rows": [7], "schema": "bench_h2h.fit_submission.v1", "script_sha256": "87c2d0328db12d226681cafe52b7519111faea239ce6912e8357841e343be0d4", "spec_sha256": "8d389fe6ae76bb3fbb59d00ffff54fb2b7b3435c9f27827a242ec48626f90678", "stage": "v2", "usage_before": {"account_jobs": 159, "bench_cores": 320, "bench_gpus": 20, "bench_jobs": 88, "bench_pending": 19, "never_startable_pending": 0, "throttle_held_not_counted": 0}, "utc": "2026-09-16T11:27:23Z"}

estimates/fitcoal/a1/ANCIENT_GROWTH_X10/K1/g0/n32/envlock_check_51944131.json

@@ -0,0 +1,17 @@
+{
+ "compared_keys": 165,
+ "drift": {},
+ "host": "cn604-03",
+ "lock": "/ibex/project/c2041/hany0c/bench_h2h_20260915/envlock/envlock_20260915T103439Z.json",
+ "lock_of_record_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe",
+ "lock_sha256": "2706d39b086f406009c0c09661392edac77d522b5bf2ef8d69b04b468525e1fe",
+ "parts": [
+  "envs",
+  "modules",
+  "ext"
+ ],
+ "schema": "bench_h2h.envlock_gate/1",
+ "slurm_job_id": "51944131",
+ "status": "PASS",
+ "utc": "20260916T123734Z"
+}

estimates/fitcoal/a1/ANCIENT_GROWTH_X10/K1/g0/n32/fit_spec.json

@@ -0,0 +1,24 @@
+{
+ "K": 1,
+ "arm": "EQ",
+ "config_id": "release_default",
+ "data_arm": "CLEAN",
+ "dataset": "v2_a1_ANCIENT_GROWTH_X10",
+ "g": 0,
+ "method": "fitcoal",
+ "mu": 1.2500000146076218e-08,
+ "mu_source": "true",
+ "n": 32,
+ "options": {},
+ "r": 9.99999993922529e-09,
+ "regions": [
+  "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000000/n32"
+ ],
+ "rep": 0,
+ "schema": "bench_h2h.fitspec.v1",
+ "settings": {
+  "file": "config/tool_settings_v2.json",
+  "method_call_sha256": "e68a7f904e40c2cf6e2a94be190adc3a9b72639ac15f3b7a3dc441376b37cd71"
+ },
+ "stage": "v2"
+}

estimates/fitcoal/a1/ANCIENT_GROWTH_X10/K1/g0/n32/fitcoal/afs.txt

@@ -0,0 +1 @@
+43769 21967 14322 10946 8385 6986 6069 5177 4767 4114 3710 3384 2986 2904 2591 2517 2314 2220 2006 1920 1774 1641 1551 1578 1327 1489 1339 1235 1182 1079 1163 1046 990 1041 954 893 854 891 855 817 754 729 722 658 659 626 632 642 669 678 528 556 562 526 569 482 485 480 453 443 481 460 430

estimates/fitcoal/a1/ANCIENT_GROWTH_X10/K1/g0/n32/fitcoal/decoder.cmd

@@ -0,0 +1 @@
+java -Xmx6g -XX:ParallelGCThreads=2 -XX:CICompilerCount=2 -cp /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/FitCoal.jar FitCoal.calculate.SinglePopDecoder -table /ibex/project/c2041/hany0c/bench_h2h_20260915/ext/fitcoal1.1/tables_n64 -input /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_ANCIENT_GROWTH_X10/K1/g0/n32/fitcoal/afs.txt -output /ibex/project/c2041/hany0c/bench_h2h_20260915/fits/v1/fitcoal/EQ/release_default/v2_a1_ANCIENT_GROWTH_X10/K1/g0/n32/fitcoal/output -generationTime 1 -mutationRate 1.2500000146076218e-05 -omitEndSFS 0 -randSeed 0 -genomeLength 30000.0 

estimates/fitcoal/a1/ANCIENT_GROWTH_X10/K1/g0/n32/fitcoal/decoder.out

@@ -0,0 +1,23 @@
+Data:1
+numOfIntervals = 1
+standardTime: 0.0 generations: 0.00 N: 26,786 changeTypes: 0
+maxLogL = -1683.1611383258114
+
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 29,594 changeTypes: 1
+standardTime: 1.2614198646633672 generations: 74660.62 N: 13,484 changeTypes: 0
+maxLogL = -343.7415991620496
+
+numOfIntervals = 3
+standardTime: 0.0 generations: 0.00 N: 29,367 changeTypes: 1
+standardTime: 0.36880367683329085 generations: 21661.23 N: 38,793 changeTypes: 2
+standardTime: 1.4577690792266136 generations: 75132.79 N: 16,507 changeTypes: 0
+maxLogL = -341.01185920498165
+
+******** Best: ********
+numOfIntervals = 2
+standardTime: 0.0 generations: 0.00 N: 29,594 changeTypes: 1
+standardTime: 1.2614198646633672 generations: 74660.62 N: 13,484 changeTypes: 0
+maxLogL = -343.7415991620496
+
+computing time = 218.24 seconds

estimates/fitcoal/a1/ANCIENT_GROWTH_X10/K1/g0/n32/fitcoal/output.txt

@@ -0,0 +1,6 @@
+year	popSize
+2000	29594
+74661	29594
+74661	13484
+4000000	13484
+