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method_inputs/a1/ANCIENT_GROWTH_X10/r00000000/n32/meta.json
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|
| 213 |
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"sample6",
|
| 214 |
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"sample7",
|
| 215 |
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"sample8",
|
| 216 |
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"sample9",
|
| 217 |
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"sample10",
|
| 218 |
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"sample11",
|
| 219 |
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"sample12",
|
| 220 |
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"sample13",
|
| 221 |
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"sample14",
|
| 222 |
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"sample15",
|
| 223 |
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"sample16",
|
| 224 |
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"sample17",
|
| 225 |
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"sample18",
|
| 226 |
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"sample19",
|
| 227 |
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"sample20",
|
| 228 |
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"sample21",
|
| 229 |
+
"sample22",
|
| 230 |
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"sample23",
|
| 231 |
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"sample24",
|
| 232 |
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"sample25",
|
| 233 |
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"sample26",
|
| 234 |
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"sample27",
|
| 235 |
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"sample28",
|
| 236 |
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"sample29",
|
| 237 |
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"sample30",
|
| 238 |
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"sample31"
|
| 239 |
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],
|
| 240 |
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"schema": "bench_h2h.export_view.v1",
|
| 241 |
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"sequence_length": 30000000,
|
| 242 |
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"sfs_total": 189977,
|
| 243 |
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"site_rule": "0 < derived < called over exported haplotypes (rung_site_mask)",
|
| 244 |
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"target_sha256": "c7de5936a4381db7858840a4de33898615f0f01982b3f3763bceeb52a15ef167",
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| 245 |
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| 246 |
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|
| 247 |
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"utc": "2026-09-16T11:04:45Z",
|
| 248 |
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"window_size": 100
|
| 249 |
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|
method_inputs/a1/ANCIENT_GROWTH_X10/r00000000/n32/view.bcf.csi
ADDED
|
Binary file (14.7 kB). View file
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|
method_inputs/a1/ANCIENT_GROWTH_X10/r00000000/v0_n32.json
ADDED
|
@@ -0,0 +1,36 @@
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|
| 1 |
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| 2 |
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| 6 |
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| 8 |
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| 9 |
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| 19 |
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| 21 |
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| 22 |
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| 23 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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|
| 33 |
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|
| 34 |
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|
| 35 |
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|
| 36 |
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|
method_inputs/a1/ANCIENT_GROWTH_X10/r00000001/n32/meta.json
ADDED
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@@ -0,0 +1,249 @@
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| 1 |
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{
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| 44 |
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| 201 |
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| 202 |
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|
| 203 |
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|
| 204 |
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"sample_id": "sim_00000001",
|
| 205 |
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"sample_index": 1,
|
| 206 |
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"sample_names": [
|
| 207 |
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"sample0",
|
| 208 |
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"sample1",
|
| 209 |
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"sample2",
|
| 210 |
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"sample3",
|
| 211 |
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"sample4",
|
| 212 |
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|
| 213 |
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"sample6",
|
| 214 |
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"sample7",
|
| 215 |
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"sample8",
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| 216 |
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"sample9",
|
| 217 |
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"sample10",
|
| 218 |
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"sample11",
|
| 219 |
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"sample12",
|
| 220 |
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"sample13",
|
| 221 |
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"sample14",
|
| 222 |
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"sample15",
|
| 223 |
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"sample16",
|
| 224 |
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"sample17",
|
| 225 |
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"sample18",
|
| 226 |
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"sample19",
|
| 227 |
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"sample20",
|
| 228 |
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"sample21",
|
| 229 |
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"sample22",
|
| 230 |
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"sample23",
|
| 231 |
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"sample24",
|
| 232 |
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"sample25",
|
| 233 |
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"sample26",
|
| 234 |
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"sample27",
|
| 235 |
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"sample28",
|
| 236 |
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"sample29",
|
| 237 |
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"sample30",
|
| 238 |
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"sample31"
|
| 239 |
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],
|
| 240 |
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"schema": "bench_h2h.export_view.v1",
|
| 241 |
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"sequence_length": 30000000,
|
| 242 |
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"sfs_total": 192201,
|
| 243 |
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"site_rule": "0 < derived < called over exported haplotypes (rung_site_mask)",
|
| 244 |
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"target_sha256": "c7de5936a4381db7858840a4de33898615f0f01982b3f3763bceeb52a15ef167",
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| 245 |
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| 246 |
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|
| 247 |
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|
| 248 |
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|
| 249 |
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|
method_inputs/a1/ANCIENT_GROWTH_X10/r00000001/n32/view.bcf.csi
ADDED
|
Binary file (14.7 kB). View file
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|
method_inputs/a1/ANCIENT_GROWTH_X10/r00000001/v0_n32.json
ADDED
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@@ -0,0 +1,36 @@
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|
| 1 |
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{
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| 2 |
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|
| 5 |
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|
| 6 |
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|
| 7 |
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|
| 8 |
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| 9 |
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|
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| 11 |
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|
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|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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|
| 33 |
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|
| 34 |
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|
| 35 |
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"utc": "2026-09-16T11:05:02Z"
|
| 36 |
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}
|
method_inputs/a1/ANCIENT_GROWTH_X10/r00000002/n32/meta.json
ADDED
|
@@ -0,0 +1,249 @@
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|
| 1 |
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{
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"S": 190983,
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| 3 |
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"arm": "CLEAN",
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|
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|
| 43 |
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|
| 44 |
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| 45 |
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|
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|
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|
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| 239 |
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| 36 |
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| 238 |
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| 239 |
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| 240 |
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| 33 |
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| 36 |
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|
| 239 |
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|
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method_inputs/a1/ANCIENT_GROWTH_X10/receipts/export_51933466.json
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| 1 |
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|
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|
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|
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| 324 |
+
"multihetsep.txt": "a1b10b9f6405d7a8fd02348dcb6dbd094430ff63759abb3b3190503b42f0adc0",
|
| 325 |
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"phlash_contig.npz": "00ff6a3fd01c2ed2d401660493dca4ae3d707a9e09f1bb41d8039ab1491f9a67",
|
| 326 |
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"sfs_unfolded.npy": "1dd0efcecdc8d5eabebedbae1c8267d680bdca44421927292f5abc2c3e7e4569",
|
| 327 |
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"view.bcf": "1d23ca7a296e3e8caf314d571aedf806073877321dfad2052b5a41c7ca29dd24",
|
| 328 |
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"view.bcf.csi": "d63b6b4041b354f7395db0eeba0c3bc4a692f7734b9b1132c64ce2519fca5483"
|
| 329 |
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},
|
| 330 |
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"meta_sha256": "ef89a90168e9de83b64aa1c95466f419f1932cd7caf302c4962e7d7f3ee8500b",
|
| 331 |
+
"mu_for_tools": 1.2500000146076218e-08,
|
| 332 |
+
"mu_source": "true constant (obs == true in CLEAN)",
|
| 333 |
+
"n": 32,
|
| 334 |
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"n_complete_sites": 189104,
|
| 335 |
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"n_duplicate_pos_dropped": 0,
|
| 336 |
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"obs_map_mean_mu": 1.2500000146076218e-08,
|
| 337 |
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"obs_map_mean_r": 9.99999993922529e-09,
|
| 338 |
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"r_for_tools": 9.99999993922529e-09,
|
| 339 |
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"sequence_length": 30000000,
|
| 340 |
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"status": "exported",
|
| 341 |
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"true_mu": 1.2500000146076218e-08,
|
| 342 |
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"true_r": 9.99999993922529e-09,
|
| 343 |
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"v0_passed": true,
|
| 344 |
+
"v0_sha256": "44434de5d2f6d791adf12ca2ba9c4cad895068e5129bd5523cc724cd64af89c4"
|
| 345 |
+
}
|
| 346 |
+
},
|
| 347 |
+
"passed": true,
|
| 348 |
+
"row_in_fragment": 3,
|
| 349 |
+
"sample_index": 7
|
| 350 |
+
}
|
| 351 |
+
},
|
| 352 |
+
"schema": "bench_h2h.export_receipt.v1",
|
| 353 |
+
"tool_sha256": {
|
| 354 |
+
"bench_rows.py": "61a6ab572aace7e3caab0402c633b67040f5473001da06ea35f610cc3c93084b",
|
| 355 |
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"export_dataset.py": "00141678d0a5e4e026d10144095b5c42f6affa75f71ceb45eaf4d7d59d8ae784",
|
| 356 |
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"export_view.py": "73ad2d4ff5e65ee72515a48f895f5172ea2f25a017632bbb85ae71789aafb795"
|
| 357 |
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},
|
| 358 |
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"utc": "2026-09-16T11:06:02Z"
|
| 359 |
+
}
|
method_inputs/a1/ANCIENT_GROWTH_X10/receipts/identity_scan_51933466.json
ADDED
|
@@ -0,0 +1,13 @@
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|
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|
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|
|
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|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "v2_a1_ANCIENT_GROWTH_X10",
|
| 3 |
+
"hits": 0,
|
| 4 |
+
"job": "51933466",
|
| 5 |
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"lines_scanned": 104996,
|
| 6 |
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"plan_sha256s": [
|
| 7 |
+
"99b4ddb46aff47babf0ae2fe52e55d152d58e33936e18622d07d81cb1115b02e"
|
| 8 |
+
],
|
| 9 |
+
"registry_path": "/ibex/project/c2041/hany0c/registry109k/raw_index.jsonl",
|
| 10 |
+
"registry_size_bytes": 219776193,
|
| 11 |
+
"schema": "bench_h2h.registry_identity_scan.v1",
|
| 12 |
+
"utc": "2026-09-16T11:04:42Z"
|
| 13 |
+
}
|
method_inputs/a1/ANCIENT_GROWTH_X10/receipts/open_audit_51933466.json
ADDED
|
@@ -0,0 +1,677 @@
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|
| 1 |
+
{
|
| 2 |
+
"opened": [
|
| 3 |
+
{
|
| 4 |
+
"mode": "r",
|
| 5 |
+
"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/data/v2_a1_ANCIENT_GROWTH_X10/samples/.fragments/fragment_00000000.done.json"
|
| 6 |
+
},
|
| 7 |
+
{
|
| 8 |
+
"mode": "r",
|
| 9 |
+
"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/data/v2_a1_ANCIENT_GROWTH_X10/samples/.fragments/fragment_00000001.done.json"
|
| 10 |
+
},
|
| 11 |
+
{
|
| 12 |
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|
| 538 |
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|
| 539 |
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{
|
| 540 |
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"mode": "w",
|
| 541 |
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|
| 542 |
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|
| 543 |
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|
| 544 |
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|
| 545 |
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|
| 546 |
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|
| 547 |
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|
| 548 |
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|
| 549 |
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|
| 550 |
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|
| 551 |
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|
| 552 |
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|
| 553 |
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|
| 554 |
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|
| 555 |
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{
|
| 556 |
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"mode": "w",
|
| 557 |
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|
| 558 |
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|
| 559 |
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{
|
| 560 |
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"mode": "r",
|
| 561 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000006/n32/phlash_contig.npz"
|
| 562 |
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|
| 563 |
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{
|
| 564 |
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"mode": "r",
|
| 565 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000006/n32/sfs_unfolded.npy"
|
| 566 |
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|
| 567 |
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|
| 568 |
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"mode": "r",
|
| 569 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000006/n32/phlash_contig.npz"
|
| 570 |
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|
| 571 |
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|
| 572 |
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"mode": "r",
|
| 573 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000006/n32/sfs_unfolded.npy"
|
| 574 |
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|
| 575 |
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{
|
| 576 |
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"mode": "r",
|
| 577 |
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|
| 578 |
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| 579 |
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|
| 580 |
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|
| 581 |
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|
| 582 |
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|
| 583 |
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|
| 584 |
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"mode": "r",
|
| 585 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/data/v2_a1_ANCIENT_GROWTH_X10/samples/.fragments/fragment_00000001.done.json"
|
| 586 |
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| 587 |
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{
|
| 588 |
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"mode": "r",
|
| 589 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/data/v2_a1_ANCIENT_GROWTH_X10/samples/.fragments/fragment_00000001.npz"
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| 590 |
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|
| 591 |
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|
| 592 |
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"mode": "r",
|
| 593 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/data/v2_a1_ANCIENT_GROWTH_X10/samples/.fragments/fragment_00000001.npz"
|
| 594 |
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|
| 595 |
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|
| 596 |
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"mode": "r",
|
| 597 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/cohort/v2_a1_ANCIENT_GROWTH_X10/chain0_level32/sample_identities.jsonl"
|
| 598 |
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|
| 599 |
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|
| 600 |
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"mode": "r",
|
| 601 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/cohort/v2_a1_ANCIENT_GROWTH_X10/chain0_level32/unphased_evidence_cache.npz"
|
| 602 |
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|
| 603 |
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|
| 604 |
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"mode": "r",
|
| 605 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/cohort/v2_a1_ANCIENT_GROWTH_X10/chain0_level32/unphased_evidence_cache.npz"
|
| 606 |
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| 607 |
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|
| 608 |
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"mode": "w",
|
| 609 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000007/.n32.tmp-bbnk0ls0/view.vcf"
|
| 610 |
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|
| 611 |
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|
| 612 |
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|
| 613 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000007/.n32.tmp-bbnk0ls0/phlash_contig.npz"
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| 614 |
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| 615 |
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| 616 |
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"mode": "w",
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| 617 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000007/.n32.tmp-bbnk0ls0/sfs_unfolded.npy"
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| 618 |
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| 619 |
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| 620 |
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"mode": "w",
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| 621 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000007/.n32.tmp-bbnk0ls0/multihetsep.txt"
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| 622 |
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| 623 |
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|
| 624 |
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| 625 |
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|
| 626 |
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|
| 627 |
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|
| 628 |
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|
| 629 |
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| 630 |
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| 631 |
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|
| 632 |
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|
| 633 |
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|
| 634 |
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| 635 |
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|
| 636 |
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| 637 |
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| 638 |
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| 639 |
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|
| 640 |
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|
| 641 |
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|
| 642 |
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|
| 643 |
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{
|
| 644 |
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"mode": "r",
|
| 645 |
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"path": "/ibex/project/c2041/hany0c/bench_h2h_20260915/export/v2_a1_ANCIENT_GROWTH_X10/r00000007/n32/sfs_unfolded.npy"
|
| 646 |
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| 647 |
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|
| 648 |
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|
| 649 |
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|
| 650 |
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|
| 651 |
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|
| 652 |
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|
| 653 |
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|
| 654 |
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| 655 |
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|
| 656 |
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|
| 657 |
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| 658 |
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| 659 |
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|
| 660 |
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|
| 661 |
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| 662 |
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|
| 664 |
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| 665 |
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| 666 |
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| 667 |
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|
| 668 |
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|
| 669 |
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| 670 |
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|
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|
| 677 |
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|
method_inputs/a1/BOT_X10_5K/r00000000/n32/meta.json
ADDED
|
@@ -0,0 +1,249 @@
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|
| 1 |
+
{
|
| 2 |
+
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| 3 |
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|
| 4 |
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| 5 |
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|
| 6 |
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|
| 7 |
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"cache_sha256": "c930f573810e63647eda049a2730cec4945083414734e39a239771d64c757c16",
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|
| 9 |
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| 10 |
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| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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|
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|
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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|
| 33 |
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|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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"contig": "region_0",
|
| 44 |
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|
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|
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| 52 |
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|
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| 60 |
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|
| 61 |
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| 240 |
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|
| 241 |
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|
| 242 |
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| 248 |
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| 249 |
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method_inputs/a1/BOT_X10_5K/r00000000/n32/multihetsep.txt
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The diff for this file is too large to render.
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|
| 6 |
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|
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| 19 |
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| 21 |
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| 22 |
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| 23 |
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| 24 |
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|
| 25 |
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|
| 26 |
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| 27 |
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| 28 |
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|
| 29 |
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|
| 30 |
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| 31 |
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| 32 |
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|
| 33 |
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| 34 |
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| 35 |
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|
| 36 |
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method_inputs/a1/BOT_X10_5K/r00000001/n32/meta.json
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| 42 |
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| 43 |
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|
| 44 |
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| 237 |
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| 241 |
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|
| 242 |
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method_inputs/a1/BOT_X10_5K/r00000001/n32/multihetsep.txt
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The diff for this file is too large to render.
See raw diff
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method_inputs/a1/BOT_X10_5K/r00000001/n32/view.bcf.csi
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|
| 6 |
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|
| 7 |
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| 8 |
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| 18 |
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| 19 |
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| 21 |
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| 22 |
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| 23 |
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| 24 |
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|
| 25 |
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| 26 |
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| 27 |
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|
| 30 |
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| 31 |
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| 32 |
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|
| 33 |
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| 34 |
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| 35 |
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|
| 36 |
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method_inputs/a1/BOT_X10_5K/r00000002/n32/meta.json
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|
| 44 |
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| 45 |
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| 52 |
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|
| 90 |
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|
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|
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|
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|
| 204 |
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|
| 205 |
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|
| 206 |
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"sample_names": [
|
| 207 |
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|
| 208 |
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| 211 |
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|
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| 216 |
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| 217 |
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| 218 |
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|
| 220 |
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"sample13",
|
| 221 |
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"sample14",
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| 222 |
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| 223 |
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"sample16",
|
| 224 |
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|
| 225 |
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| 226 |
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|
| 227 |
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"sample20",
|
| 228 |
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"sample21",
|
| 229 |
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| 230 |
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"sample23",
|
| 231 |
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"sample24",
|
| 232 |
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"sample25",
|
| 233 |
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"sample26",
|
| 234 |
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"sample27",
|
| 235 |
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"sample28",
|
| 236 |
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"sample29",
|
| 237 |
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"sample30",
|
| 238 |
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"sample31"
|
| 239 |
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|
| 240 |
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"schema": "bench_h2h.export_view.v1",
|
| 241 |
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"sequence_length": 30000000,
|
| 242 |
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"sfs_total": 53304,
|
| 243 |
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"site_rule": "0 < derived < called over exported haplotypes (rung_site_mask)",
|
| 244 |
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"target_sha256": "5010d9a0e65e760acaa74918238dc2de683e566caebfe94515888f0899074e72",
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| 245 |
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| 246 |
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|
| 247 |
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|
| 248 |
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|
| 249 |
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|
method_inputs/a1/BOT_X10_5K/r00000002/n32/multihetsep.txt
ADDED
|
The diff for this file is too large to render.
See raw diff
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|
|
method_inputs/a1/BOT_X10_5K/r00000002/n32/view.bcf.csi
ADDED
|
Binary file (13.9 kB). View file
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|
method_inputs/a1/BOT_X10_5K/r00000002/v0_n32.json
ADDED
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@@ -0,0 +1,36 @@
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| 1 |
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{
|
| 2 |
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| 3 |
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| 4 |
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|
| 5 |
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|
| 6 |
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|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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| 11 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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|
| 33 |
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|
| 34 |
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|
| 35 |
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|
| 36 |
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method_inputs/a1/BOT_X10_5K/r00000003/n32/meta.json
ADDED
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| 1 |
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{
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"S": 50488,
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"arm": "CLEAN",
|
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| 21 |
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|
| 22 |
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|
| 23 |
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| 24 |
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| 25 |
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|
| 26 |
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| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
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|
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|
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|
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|
| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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|
| 44 |
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|
| 45 |
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| 46 |
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|
| 47 |
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|
| 49 |
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| 50 |
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| 51 |
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| 52 |
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|
| 53 |
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|
| 54 |
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| 55 |
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|
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 202 |
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"r_for_tools": 9.99999993922529e-09,
|
| 203 |
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"row_in_fragment": 3,
|
| 204 |
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"sample_id": "sim_00000003",
|
| 205 |
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"sample_index": 3,
|
| 206 |
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"sample_names": [
|
| 207 |
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"sample0",
|
| 208 |
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"sample1",
|
| 209 |
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"sample2",
|
| 210 |
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"sample3",
|
| 211 |
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"sample4",
|
| 212 |
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"sample5",
|
| 213 |
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"sample6",
|
| 214 |
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"sample7",
|
| 215 |
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"sample8",
|
| 216 |
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"sample9",
|
| 217 |
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"sample10",
|
| 218 |
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"sample11",
|
| 219 |
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"sample12",
|
| 220 |
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"sample13",
|
| 221 |
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"sample14",
|
| 222 |
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"sample15",
|
| 223 |
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"sample16",
|
| 224 |
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"sample17",
|
| 225 |
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"sample18",
|
| 226 |
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"sample19",
|
| 227 |
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"sample20",
|
| 228 |
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"sample21",
|
| 229 |
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"sample22",
|
| 230 |
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"sample23",
|
| 231 |
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"sample24",
|
| 232 |
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"sample25",
|
| 233 |
+
"sample26",
|
| 234 |
+
"sample27",
|
| 235 |
+
"sample28",
|
| 236 |
+
"sample29",
|
| 237 |
+
"sample30",
|
| 238 |
+
"sample31"
|
| 239 |
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],
|
| 240 |
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"schema": "bench_h2h.export_view.v1",
|
| 241 |
+
"sequence_length": 30000000,
|
| 242 |
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"sfs_total": 50488,
|
| 243 |
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"site_rule": "0 < derived < called over exported haplotypes (rung_site_mask)",
|
| 244 |
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"target_sha256": "5010d9a0e65e760acaa74918238dc2de683e566caebfe94515888f0899074e72",
|
| 245 |
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|
| 246 |
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"true_r": 9.99999993922529e-09,
|
| 247 |
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"utc": "2026-09-16T10:58:48Z",
|
| 248 |
+
"window_size": 100
|
| 249 |
+
}
|
method_inputs/a1/BOT_X10_5K/r00000003/n32/multihetsep.txt
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
method_inputs/a1/BOT_X10_5K/r00000003/n32/view.bcf.csi
ADDED
|
Binary file (13.9 kB). View file
|
|
|
method_inputs/a1/BOT_X10_5K/r00000003/v0_n32.json
ADDED
|
@@ -0,0 +1,36 @@
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|
| 1 |
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{
|
| 2 |
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"canonical_id": "4cc8cc2edcdd89f42af05cd74b2c4b95bb50269672d9e8f8eae7e30f35a93530:00000003",
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| 3 |
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"checks": {
|
| 4 |
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"S_matches": true,
|
| 5 |
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"afs_is_sfs_interior": true,
|
| 6 |
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"big_endian_differs": true,
|
| 7 |
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"bit_rule_matches_little_endian": true,
|
| 8 |
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"cache_folded_sfs_matches": true,
|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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"cache_target_bitwise": true,
|
| 15 |
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"columns_follow_ladder_rule": true,
|
| 16 |
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|
| 17 |
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|
| 18 |
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"het_matrix_matches_bcf": true,
|
| 19 |
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"het_matrix_shape": true,
|
| 20 |
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"ladder_matches_recomputed_level_columns": true,
|
| 21 |
+
"ladder_not_sorted": true,
|
| 22 |
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"multihetsep_matches_awk_port": true,
|
| 23 |
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"multihetsep_matches_script": true,
|
| 24 |
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"multihetsep_script_ran": true,
|
| 25 |
+
"multihetsep_script_required_and_ran": true,
|
| 26 |
+
"pos_unique_in_range": true,
|
| 27 |
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"samples_match": true,
|
| 28 |
+
"sfs_matches_bcf": true,
|
| 29 |
+
"single_contig": true,
|
| 30 |
+
"view_S": 50488
|
| 31 |
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},
|
| 32 |
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"n": 32,
|
| 33 |
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"passed": true,
|
| 34 |
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"schema": "bench_h2h.v0.v1",
|
| 35 |
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"utc": "2026-09-16T10:58:51Z"
|
| 36 |
+
}
|
method_inputs/a1/BOT_X10_5K/r00000004/n32/meta.json
ADDED
|
@@ -0,0 +1,249 @@
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|
| 1 |
+
{
|
| 2 |
+
"S": 52084,
|
| 3 |
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"arm": "CLEAN",
|
| 4 |
+
"bcftools_version": "bcftools 1.16-90-gab5de54-dirty",
|
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|
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|
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|
| 235 |
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"sample29",
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| 237 |
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"sample30",
|
| 238 |
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|
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| 240 |
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|
| 241 |
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|
| 242 |
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|
| 243 |
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| 248 |
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| 249 |
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|
method_inputs/a1/BOT_X10_5K/r00000004/n32/multihetsep.txt
ADDED
|
The diff for this file is too large to render.
See raw diff
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method_inputs/a1/BOT_X10_5K/r00000004/n32/view.bcf.csi
ADDED
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@@ -0,0 +1,36 @@
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| 1 |
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{
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|
| 5 |
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|
| 6 |
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|
| 7 |
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|
| 8 |
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|
| 9 |
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|
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|
| 14 |
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|
| 15 |
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|
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| 17 |
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|
| 18 |
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|
| 19 |
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|
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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|
| 33 |
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|
| 34 |
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| 35 |
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|
| 36 |
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|
method_inputs/a1/BOT_X10_5K/r00000005/n32/meta.json
ADDED
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@@ -0,0 +1,249 @@
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method_inputs/a1/BOT_X10_5K/r00000005/n32/multihetsep.txt
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The diff for this file is too large to render.
See raw diff
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method_inputs/a1/BOT_X10_5K/r00000005/n32/view.bcf.csi
ADDED
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Binary file (13.9 kB). View file
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method_inputs/a1/BOT_X10_5K/r00000005/v0_n32.json
ADDED
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@@ -0,0 +1,36 @@
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|
| 30 |
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| 31 |
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| 32 |
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| 33 |
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| 34 |
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| 35 |
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"utc": "2026-09-16T10:59:01Z"
|
| 36 |
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