FORESEE / README.md
LiangruiPan's picture
Update README.md
4c8eec0 verified
|
Raw
History Blame Contribute Delete
788 Bytes

Dataset structure

This dataset contains the LUAD data snapshot used for FORESEE evaluation.

Files:

  • tcga_type_all_clean.csv: cleaned LUAD clinical table, including patient ID, survival time, survival status, and matched sample information.
  • tcga_type_rna.csv: RNA-seq features matched to patient/sample IDs.
  • tcga_type_cnv.csv: CNV features matched to patient/sample IDs.
  • tcga_type_mut.csv: mutation features matched to patient/sample IDs.

Data leakage check: We checked patient-level overlap between the training cohort and this evaluation cohort using TCGA patient barcodes/case IDs and sample IDs. No overlapping patients were identified.

Usage: These files are provided to reproduce the LUAD evaluation and to verify the exact patient-level data snapshot used in the study.