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9
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
67503
NS2.947-956
FragmentOfANaturalSequenceMolecule
Peptide from protein
TYVYDHLTPL
10
null
947
956
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1319441
48
Table 3, Table 5, Figure 2
Positive
true
null
9606
null
null
DOID:1883
29
null
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
1
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
67503
NS2.947-956
FragmentOfANaturalSequenceMolecule
Peptide from protein
TYVYDHLTPL
10
null
947
956
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1319446
67
Figure 2
Positive
true
null
9606
null
null
DOID:1883
29
null
T cell CD8+
blood
Short Term Restimulated
Exact match to reference information
Not determined
null
1
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
67503
NS2.947-956
FragmentOfANaturalSequenceMolecule
Peptide from protein
TYVYDHLTPL
10
null
947
956
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1319449
67
Figure 2
Positive
true
null
9606
null
null
DOID:1883
30
null
T cell CD8+
blood
Short Term Restimulated
Exact match to reference information
Not determined
null
1
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
67503
NS2.947-956
FragmentOfANaturalSequenceMolecule
Peptide from protein
TYVYDHLTPL
10
null
947
956
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318520
48
Table 3, Table 5 , Figure 2
Positive
true
null
9606
null
null
DOID:1883
30
null
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
1
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
5935
NS3.1031-1040
FragmentOfANaturalSequenceMolecule
Peptide from protein
AYSQQTRGLL
10
null
1,031
1,040
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318521
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
4
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
72039
NS3.1081-1090
FragmentOfANaturalSequenceMolecule
Peptide from protein
VYHGAGSKTL
10
null
1,081
1,090
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318522
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
6
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
5714
NS3.1243-1252
FragmentOfANaturalSequenceMolecule
Peptide from protein
AYAAQGYKVL
10
null
1,243
1,252
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1319447
67
Figure 2
Positive
true
null
9606
null
null
DOID:1883
308
null
T cell CD8+
blood
Short Term Restimulated
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
5714
NS3.1243-1252
FragmentOfANaturalSequenceMolecule
Peptide from protein
AYAAQGYKVL
10
null
1,243
1,252
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1319450
67
Figure 2
Positive
true
null
9606
null
null
DOID:1883
307
null
T cell CD8+
blood
Short Term Restimulated
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
5714
NS3.1243-1252
FragmentOfANaturalSequenceMolecule
Peptide from protein
AYAAQGYKVL
10
null
1,243
1,252
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318523
48
Figure 2, Table 3, Table 5
Positive
true
null
9606
null
null
DOID:1883
308
null
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
5714
NS3.1243-1252
FragmentOfANaturalSequenceMolecule
Peptide from protein
AYAAQGYKVL
10
null
1,243
1,252
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1319442
48
Figure 2, Table 3, Table 5
Positive
true
null
9606
null
null
DOID:1883
307
null
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
19628
NS3.1443-1451
FragmentOfANaturalSequenceMolecule
Peptide from protein
GFTGDFDSV
9
null
1,443
1,451
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1319448
67
Figure 2
Positive
true
null
9606
null
null
DOID:1883
204
null
T cell CD8+
blood
Short Term Restimulated
Exact match to reference information
Not determined
null
9
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
19628
NS3.1443-1451
FragmentOfANaturalSequenceMolecule
Peptide from protein
GFTGDFDSV
9
null
1,443
1,451
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318524
48
Table 3, Table 5
Positive
true
null
9606
null
null
DOID:1883
204
null
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
9
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
8318
NS3.1463-1472
FragmentOfANaturalSequenceMolecule
Peptide from protein
DFSLDPTFTI
10
null
1,463
1,472
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318525
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
7
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
12109
NS3.1556-1565
FragmentOfANaturalSequenceMolecule
Peptide from protein
EFWESVFTGL
10
null
1,556
1,565
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318526
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
68605
NS4B.1759-1768
FragmentOfANaturalSequenceMolecule
Peptide from protein
VFWAKHMWNF
10
null
1,759
1,768
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318527
48
Table 3, Table 5
Positive
true
null
9606
null
null
DOID:1883
215
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
1
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
1404
NS4B.1792-1801
FragmentOfANaturalSequenceMolecule
Peptide from protein
AFTASITSPL
10
null
1,792
1,801
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318528
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
7
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
23338
NS4B.1854-1863
FragmentOfANaturalSequenceMolecule
Peptide from protein
GYGAGVAGAL
10
null
1,854
1,863
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318529
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
4
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
8285
NS5A.1990-1999
FragmentOfANaturalSequenceMolecule
Peptide from protein
DFKTWLQSKL
10
null
1,990
1,999
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318530
48
Table 3, Table 5
Positive
true
null
9606
null
null
DOID:1883
215
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
1
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
15917
NS5A.2121-2130
FragmentOfANaturalSequenceMolecule
Peptide from protein
FFTEVDGVRL
10
null
2,121
2,130
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318531
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
9
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
56505
NS5A.2132-2141
FragmentOfANaturalSequenceMolecule
Peptide from protein
RYAPVCKPLL
10
null
2,132
2,141
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318532
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
68554
NS5A.2146-2155
FragmentOfANaturalSequenceMolecule
Peptide from protein
VFQVGLNQYL
10
null
2,146
2,155
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318533
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
2
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
10933
NS5A.2292-2301
FragmentOfANaturalSequenceMolecule
Peptide from protein
DYNPPLLESW
10
null
2,292
2,301
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318534
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
23339
NS5B.2521-2530
FragmentOfANaturalSequenceMolecule
Peptide from protein
GYGAKDVRSL
10
null
2,521
2,530
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318535
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
35930
NS5B.2944-2953
FragmentOfANaturalSequenceMolecule
Peptide from protein
LFNWAVKTKL
10
null
2,944
2,953
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318536
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
9
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
43099
E1.275-285
FragmentOfANaturalSequenceMolecule
Peptide from protein
MYVGDLCGSVF
11
null
275
285
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318538
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
2
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
67481
E2.593-603
FragmentOfANaturalSequenceMolecule
Peptide from protein
TYTKCGSGPWL
11
null
593
603
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318539
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
1
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
75449
E2.611-621
FragmentOfANaturalSequenceMolecule
Peptide from protein
YPYRLWHYPCT
11
null
611
621
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318540
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
2
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
72567
E2.616-626
FragmentOfANaturalSequenceMolecule
Peptide from protein
WHYPCTVNFTV
11
null
616
626
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318541
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
9
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
5726
E2.787-797
FragmentOfANaturalSequenceMolecule
Peptide from protein
AYALYGVWPLL
11
null
787
797
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318542
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
5
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
40785
E2.790-800
FragmentOfANaturalSequenceMolecule
Peptide from protein
LYGVWPLLLLL
11
null
790
800
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318543
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
50197
NS2.833-843
FragmentOfANaturalSequenceMolecule
Peptide from protein
PYYKVFLARLI
11
null
833
843
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318544
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
7
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
52904
NS2.847-857
FragmentOfANaturalSequenceMolecule
Peptide from protein
QYFITRAEAHL
11
null
847
857
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318545
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
5
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
40850
NS3.1130-1140
FragmentOfANaturalSequenceMolecule
Peptide from protein
LYLVTRHADVV
11
null
1,130
1,140
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318546
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
2
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
28792
NS3.1158-1168
FragmentOfANaturalSequenceMolecule
Peptide from protein
ISYLKGSSGGP
11
null
1,158
1,168
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318547
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
4
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
18397
NS3.1375-1385
FragmentOfANaturalSequenceMolecule
Peptide from protein
FYGKAIPIEAI
11
null
1,375
1,385
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318548
48
Table 3, Table 5
Positive
true
null
9606
null
null
DOID:1883
215
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
8
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
5957
NS3.1416-1426
FragmentOfANaturalSequenceMolecule
Peptide from protein
AYYRGLDVSVI
11
null
1,416
1,426
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318549
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
2
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
7351
NS3.1520-1530
FragmentOfANaturalSequenceMolecule
Peptide from protein
CYDAGCAWYEL
11
null
1,520
1,530
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318550
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
4
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
40934
NS3.1625-1635
FragmentOfANaturalSequenceMolecule
Peptide from protein
LYRLGAVQNEV
11
null
1,625
1,635
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318551
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
5
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
5737
NS4A.1672-1682
FragmentOfANaturalSequenceMolecule
Peptide from protein
AYCLTTGSVVI
11
null
1,672
1,682
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318552
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
2
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
54025
NS5A.2013-2023
FragmentOfANaturalSequenceMolecule
Peptide from protein
RGYKGVWRGDG
11
null
2,013
2,023
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318553
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
6
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
15107
NS5A.2089-2099
FragmentOfANaturalSequenceMolecule
Peptide from protein
EYVEVTRVGDF
11
null
2,089
2,099
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318554
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
6
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
72165
NS5B.2456-2466
FragmentOfANaturalSequenceMolecule
Peptide from protein
VYSTTSRSASL
11
null
2,456
2,466
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318555
48
Table 3, Table 5
Positive
true
null
9606
null
null
DOID:1883
215
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
6
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
53034
NS5B.2613-2623
FragmentOfANaturalSequenceMolecule
Peptide from protein
QYSPGQRVEFL
11
null
2,613
2,623
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318556
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
7
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
23447
NS5B.2694-2704
FragmentOfANaturalSequenceMolecule
Peptide from protein
GYRRCRASGVL
11
null
2,694
2,704
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318557
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
6
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
76546
NS5B.2801-2811
FragmentOfANaturalSequenceMolecule
Peptide from protein
YYLTRDPTTPL
11
null
2,801
2,811
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318558
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
4
307.xml
307
2025-11-06-08:00
15166436
2,004
Identification of novel hepatitis C virus-specific cytotoxic T lymphocyte epitopes by ELISpot assay using peptides with human leukocyte antigen-A*2402-binding motifs.
The Journal of general virology
Taku Hakamada; Kiyomi Funatsuki; Hiroki Morita; Takuhiro Ugajin; Ikuo Nakamura; Hiroaki Ishiko; Yasushi Matsuzaki; Naomi Tanaka; Michio Imawari
43036
NS5B.2833-2843
FragmentOfANaturalSequenceMolecule
Peptide from protein
MYAPTLWARMI
11
null
2,833
2,843
3052230
P26662.3
null
Exact Epitope
Not determined
TCell
1318559
48
Table 3
Negative
false
null
9606
null
null
DOID:1883
303
215
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Not determined
null
2
308.xml
308
2025-09-25-07:00
9108020
1,997
Crystal structure of Lyme disease antigen outer surface protein A complexed with an Fab.
Proceedings of the National Academy of Sciences of the United States of America
H Li; J J Dunn; B J Luft; C L Lawson
2285339
Epitope of Fab 184.1 on Outer surface protein A
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
V30, S31, V32, D33, L34, P35, K44, E45, K46, Y52, D68, K69, N70, N71, S91, D92, D93, L94, G95, K117, D118, K119
null
null
224326
P0CL66.1
V30, S31, V32, D33, L34, P35, K44, E45, K46, Y52, D68, K69, N70, N71, S91, D92, D93, L94, G95, K117, D118, K119
Exact Epitope
Representative selection
BCell
164
436
Figures 1, 2, 4, 5, Table 1 and PDB 1OSP
Positive
true
1.95
10000000
null
null
null
null
null
null
null
null
Representative selection
Exact match to reference information
null
3
309.xml
309
2025-11-06-08:00
15534202
2,004
Crystal structure of a human CD3-epsilon/delta dimer in complex with a UCHT1 single-chain antibody fragment.
Proceedings of the National Academy of Sciences of the United States of America
Kelly L Arnett; Stephen C Harrison; Don C Wiley
2134651
UCHT1 scFv epitope on CD3-epsilon chain
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
E56, N65, I66, G68, D69, E70, S77, Y99, R101, G102, S103, K104, P105, E106, D107
null
null
9606
P07766.2
E35, N44, I45, G47, D48, E49, S56, Y78, R80, G81, S82, K83, P84, E85, D86
Exact Epitope
Representative selection
BCell
165
436
Figures 1, 4 and PDB 1XIW
Positive
true
1.9
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
3
310.xml
310
2025-11-06-08:00
15136729
2,004
Crystal structure of the human T cell receptor CD3 epsilon gamma heterodimer complexed to the therapeutic mAb OKT3.
Proceedings of the National Academy of Sciences of the United States of America
Lars Kjer-Nielsen; Michelle A Dunstone; Lyudmila Kostenko; Lauren K Ely; Travis Beddoe; Nicole A Mifsud; Anthony W Purcell; Andrew G Brooks; James McCluskey; Jamie Rossjohn
2134650
OKT3 Fab epitope on T-cell receptor CD3 epsilon chain
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
E56, G68, E70, R101, G102, S103, K104, P105, D107
null
null
9606
P07766.2
E34, G46, E48, R79, G80, S81, K82, P83, D85
Exact Epitope
Representative selection
BCell
1700414
263
Figure 5
Positive
true
0.48
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
1
310.xml
310
2025-11-06-08:00
15136729
2,004
Crystal structure of the human T cell receptor CD3 epsilon gamma heterodimer complexed to the therapeutic mAb OKT3.
Proceedings of the National Academy of Sciences of the United States of America
Lars Kjer-Nielsen; Michelle A Dunstone; Lyudmila Kostenko; Lauren K Ely; Travis Beddoe; Nicole A Mifsud; Anthony W Purcell; Andrew G Brooks; James McCluskey; Jamie Rossjohn
2134650
OKT3 Fab epitope on T-cell receptor CD3 epsilon chain
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
E56, G68, E70, R101, G102, S103, K104, P105, D107
null
null
9606
P07766.2
E34, G46, E48, R79, G80, S81, K82, P83, D85
Exact Epitope
Representative selection
BCell
1700410
263
Supporting Figure 7 and Supporting Table 4
Positive
true
0.39
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
1
310.xml
310
2025-11-06-08:00
15136729
2,004
Crystal structure of the human T cell receptor CD3 epsilon gamma heterodimer complexed to the therapeutic mAb OKT3.
Proceedings of the National Academy of Sciences of the United States of America
Lars Kjer-Nielsen; Michelle A Dunstone; Lyudmila Kostenko; Lauren K Ely; Travis Beddoe; Nicole A Mifsud; Anthony W Purcell; Andrew G Brooks; James McCluskey; Jamie Rossjohn
2134650
OKT3 Fab epitope on T-cell receptor CD3 epsilon chain
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
E56, G68, E70, R101, G102, S103, K104, P105, D107
null
null
9606
P07766.2
E34, G46, E48, R79, G80, S81, K82, P83, D85
Exact Epitope
Representative selection
BCell
167
436
Figures 1, 4, Table 1, Supporting Table 2 and PDB 1SY6
Positive
true
2.1
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
1
310.xml
310
2025-11-06-08:00
15136729
2,004
Crystal structure of the human T cell receptor CD3 epsilon gamma heterodimer complexed to the therapeutic mAb OKT3.
Proceedings of the National Academy of Sciences of the United States of America
Lars Kjer-Nielsen; Michelle A Dunstone; Lyudmila Kostenko; Lauren K Ely; Travis Beddoe; Nicole A Mifsud; Anthony W Purcell; Andrew G Brooks; James McCluskey; Jamie Rossjohn
2134650
OKT3 Fab epitope on T-cell receptor CD3 epsilon chain
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
E56, G68, E70, R101, G102, S103, K104, P105, D107
null
null
9606
P07766.2
E34, G46, E48, R79, G80, S81, K82, P83, D85
Exact Epitope
Representative selection
BCell
1700411
45
Supporting Figure 7 and Supporting Table 4
Positive
true
680.0
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
1
310.xml
310
2025-11-06-08:00
15136729
2,004
Crystal structure of the human T cell receptor CD3 epsilon gamma heterodimer complexed to the therapeutic mAb OKT3.
Proceedings of the National Academy of Sciences of the United States of America
Lars Kjer-Nielsen; Michelle A Dunstone; Lyudmila Kostenko; Lauren K Ely; Travis Beddoe; Nicole A Mifsud; Anthony W Purcell; Andrew G Brooks; James McCluskey; Jamie Rossjohn
2134650
OKT3 Fab epitope on T-cell receptor CD3 epsilon chain
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
E56, G68, E70, R101, G102, S103, K104, P105, D107
null
null
9606
P07766.2
E34, G46, E48, R79, G80, S81, K82, P83, D85
Exact Epitope
Representative selection
BCell
1700415
45
Figure 5
Positive
true
2630.0
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
1
310.xml
310
2025-11-06-08:00
15136729
2,004
Crystal structure of the human T cell receptor CD3 epsilon gamma heterodimer complexed to the therapeutic mAb OKT3.
Proceedings of the National Academy of Sciences of the United States of America
Lars Kjer-Nielsen; Michelle A Dunstone; Lyudmila Kostenko; Lauren K Ely; Travis Beddoe; Nicole A Mifsud; Anthony W Purcell; Andrew G Brooks; James McCluskey; Jamie Rossjohn
2134650
OKT3 Fab epitope on T-cell receptor CD3 epsilon chain
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
E56, G68, E70, R101, G102, S103, K104, P105, D107
null
null
9606
P07766.2
E34, G46, E48, R79, G80, S81, K82, P83, D85
Exact Epitope
Representative selection
BCell
1700408
262
Supporting Figure 7 and Supporting Table 4
Positive
true
60900.0
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
1
310.xml
310
2025-11-06-08:00
15136729
2,004
Crystal structure of the human T cell receptor CD3 epsilon gamma heterodimer complexed to the therapeutic mAb OKT3.
Proceedings of the National Academy of Sciences of the United States of America
Lars Kjer-Nielsen; Michelle A Dunstone; Lyudmila Kostenko; Lauren K Ely; Travis Beddoe; Nicole A Mifsud; Anthony W Purcell; Andrew G Brooks; James McCluskey; Jamie Rossjohn
2134650
OKT3 Fab epitope on T-cell receptor CD3 epsilon chain
DiscontinuousRegionOnAccessionSequenceMolecule
Discontinuous protein residues
null
null
E56, G68, E70, R101, G102, S103, K104, P105, D107
null
null
9606
P07766.2
E34, G46, E48, R79, G80, S81, K82, P83, D85
Exact Epitope
Representative selection
BCell
1700409
262
Figure 5
Positive
true
197000.0
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
1
312.xml
312
2023-08-18-07:00
10543973
1,999
Selection and analysis of an optimized anti-VEGF antibody: crystal structure of an affinity-matured Fab in complex with antigen.
Journal of molecular biology
Y Chen; C Wiesmann; G Fuh; B Li; H W Christinger; P McKay; A M de Vos; H B Lowman
2135423
Fab Y0317 epitope on VEGF
RegionOnMultiChainMolecule
Region on multi-chain protein
null
null
V: F43; W: Y71, K74, Q105, I106, M107, R108, I109, H112, Q113, G114, Q115, H116, I117, G118, E119, M120
null
null
9606
P15692.2
V: F17; W: Y45, K48, Q79, I80, M81, R82, I83, H86, Q87, G88, Q89, H90, I91, G92, E93, M94
Exact Epitope
Representative selection
BCell
1708372
262
Table 8
Positive
true
53000.0
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
6
312.xml
312
2023-08-18-07:00
10543973
1,999
Selection and analysis of an optimized anti-VEGF antibody: crystal structure of an affinity-matured Fab in complex with antigen.
Journal of molecular biology
Y Chen; C Wiesmann; G Fuh; B Li; H W Christinger; P McKay; A M de Vos; H B Lowman
2135423
Fab Y0317 epitope on VEGF
RegionOnMultiChainMolecule
Region on multi-chain protein
null
null
V: F43; W: Y71, K74, Q105, I106, M107, R108, I109, H112, Q113, G114, Q115, H116, I117, G118, E119, M120
null
null
9606
P15692.2
V: F17; W: Y45, K48, Q79, I80, M81, R82, I83, H86, Q87, G88, Q89, H90, I91, G92, E93, M94
Exact Epitope
Representative selection
BCell
1708373
263
Table 8
Positive
true
0.0000074
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
6
312.xml
312
2023-08-18-07:00
10543973
1,999
Selection and analysis of an optimized anti-VEGF antibody: crystal structure of an affinity-matured Fab in complex with antigen.
Journal of molecular biology
Y Chen; C Wiesmann; G Fuh; B Li; H W Christinger; P McKay; A M de Vos; H B Lowman
2135423
Fab Y0317 epitope on VEGF
RegionOnMultiChainMolecule
Region on multi-chain protein
null
null
V: F43; W: Y71, K74, Q105, I106, M107, R108, I109, H112, Q113, G114, Q115, H116, I117, G118, E119, M120
null
null
9606
P15692.2
V: F17; W: Y45, K48, Q79, I80, M81, R82, I83, H86, Q87, G88, Q89, H90, I91, G92, E93, M94
Exact Epitope
Representative selection
BCell
1708356
436
Figure 4, Table 10 and PDB 1CZ8
Positive
true
2.4
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
6
312.xml
312
2023-08-18-07:00
10543973
1,999
Selection and analysis of an optimized anti-VEGF antibody: crystal structure of an affinity-matured Fab in complex with antigen.
Journal of molecular biology
Y Chen; C Wiesmann; G Fuh; B Li; H W Christinger; P McKay; A M de Vos; H B Lowman
2135423
Fab Y0317 epitope on VEGF
RegionOnMultiChainMolecule
Region on multi-chain protein
null
null
V: F43; W: Y71, K74, Q105, I106, M107, R108, I109, H112, Q113, G114, Q115, H116, I117, G118, E119, M120
null
null
9606
P15692.2
V: F17; W: Y45, K48, Q79, I80, M81, R82, I83, H86, Q87, G88, Q89, H90, I91, G92, E93, M94
Exact Epitope
Representative selection
BCell
1708357
304
Table 9 and Figure 2
Positive
true
0.0198
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
6
312.xml
312
2023-08-18-07:00
10543973
1,999
Selection and analysis of an optimized anti-VEGF antibody: crystal structure of an affinity-matured Fab in complex with antigen.
Journal of molecular biology
Y Chen; C Wiesmann; G Fuh; B Li; H W Christinger; P McKay; A M de Vos; H B Lowman
2135423
Fab Y0317 epitope on VEGF
RegionOnMultiChainMolecule
Region on multi-chain protein
null
null
V: F43; W: Y71, K74, Q105, I106, M107, R108, I109, H112, Q113, G114, Q115, H116, I117, G118, E119, M120
null
null
9606
P15692.2
V: F17; W: Y45, K48, Q79, I80, M81, R82, I83, H86, Q87, G88, Q89, H90, I91, G92, E93, M94
Exact Epitope
Representative selection
BCell
1708375
316
Text page 871 and Figure 3
Positive
true
null
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
6
312.xml
312
2023-08-18-07:00
10543973
1,999
Selection and analysis of an optimized anti-VEGF antibody: crystal structure of an affinity-matured Fab in complex with antigen.
Journal of molecular biology
Y Chen; C Wiesmann; G Fuh; B Li; H W Christinger; P McKay; A M de Vos; H B Lowman
2135423
Fab Y0317 epitope on VEGF
RegionOnMultiChainMolecule
Region on multi-chain protein
null
null
V: F43; W: Y71, K74, Q105, I106, M107, R108, I109, H112, Q113, G114, Q115, H116, I117, G118, E119, M120
null
null
9606
P15692.2
V: F17; W: Y45, K48, Q79, I80, M81, R82, I83, H86, Q87, G88, Q89, H90, I91, G92, E93, M94
Exact Epitope
Representative selection
BCell
1708358
45
Table 8
Positive
true
0.14
10000000
null
null
null
null
null
null
null
null
Representative selection
Representative selection
null
6
313.xml
313
2023-08-18-07:00
15699429
2,005
Mapping of B-cell epitopes in a Trypanosoma cruzi immunodominant antigen expressed in natural infections.
Clinical and diagnostic laboratory immunology.
Mylène Lesénéchal; Laurence Becquart; Xavier Lacoux; Laurent Ladavière; Renata C P Baida; Glaucia Paranhos-Baccalà; José Franco da Silveira
46837
Tc40 408-417
FragmentOfANaturalSequenceMolecule
Peptide from protein
PAKAAAPPAA
10
null
408
417
5693
AAC47657.1
null
Exact Epitope
Representative selection
BCell
179
311
Figure 4
Positive
true
80.0
9606
null
null
DOID:12140
null
null
null
null
null
Exact match to reference information
Representative selection
null
6
313.xml
313
2023-08-18-07:00
15699429
2,005
Mapping of B-cell epitopes in a Trypanosoma cruzi immunodominant antigen expressed in natural infections.
Clinical and diagnostic laboratory immunology.
Mylène Lesénéchal; Laurence Becquart; Xavier Lacoux; Laurent Ladavière; Renata C P Baida; Glaucia Paranhos-Baccalà; José Franco da Silveira
149109
Peptide S23G
FragmentOfANaturalSequenceMolecule
Peptide from protein
SPPVSAPAKAAAPPAAARSAEPHVG
25
null
402
426
5693
AAC47657.1
null
Epitope containing region/antigenic site
Representative selection
BCell
1850695
34
Figure 5
Positive
true
null
9606
null
null
DOID:12140
null
null
null
null
null
Exact match to reference information
Representative selection
null
1
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
37290
Spike S2 (803-828)
FragmentOfANaturalSequenceMolecule
Peptide from protein
LLFNKVTLADAGFMKQYGECLGDINA
26
null
803
828
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850735
34
Figure 2
Positive
true
null
9606
null
null
DOID:2945
null
null
null
null
null
Exact match to reference information
Representative selection
null
8
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
46822
Spike S2 (1061-1093)
FragmentOfANaturalSequenceMolecule
Peptide from protein
PAICHEGKAYFPREGVFVFNGTSWFITQRNFFS
33
null
1,061
1,093
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850736
34
Figure 2
Positive
true
null
9606
null
null
DOID:2945
null
null
null
null
null
Exact match to reference information
Representative selection
null
5
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149392
F1
FragmentOfANaturalSequenceMolecule
Peptide from protein
NLLLQYGSFCTQLNRALSGIAAEQDRNTREVFAQVKQMYKTPTLKYFGGF
50
null
733
782
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850702
34
Figure 2
Negative
false
null
9606
null
null
DOID:2945
null
null
null
null
null
Exact match to reference information
Representative selection
null
7
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149456
F3
FragmentOfANaturalSequenceMolecule
Peptide from protein
RSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLP
48
null
797
844
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850709
37
Figure 3
Positive
true
null
10000206
null
null
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
2
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149456
F3
FragmentOfANaturalSequenceMolecule
Peptide from protein
RSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLP
48
null
797
844
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850712
139
Figure 4
Positive
true
null
10000206
null
null
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
2
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149456
F3
FragmentOfANaturalSequenceMolecule
Peptide from protein
RSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLP
48
null
797
844
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850727
37
Figure 3
Positive
true
null
10000000
F
6 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
2
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149456
F3
FragmentOfANaturalSequenceMolecule
Peptide from protein
RSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLP
48
null
797
844
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850726
37
Figure 3
Positive
true
null
10000000
F
6 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
2
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149456
F3
FragmentOfANaturalSequenceMolecule
Peptide from protein
RSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLP
48
null
797
844
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850728
139
Figure 4
Positive
true
null
10000000
F
6 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
2
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149456
F3
FragmentOfANaturalSequenceMolecule
Peptide from protein
RSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLP
48
null
797
844
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850710
37
Figure 3
Positive
true
null
10000206
null
null
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
2
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149456
F3
FragmentOfANaturalSequenceMolecule
Peptide from protein
RSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLP
48
null
797
844
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850729
316
Figure 5
Positive
true
null
10000000
F
6 weeks
null
null
null
null
null
null
Representative selection
Exact match to reference information
null
2
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149456
F3
FragmentOfANaturalSequenceMolecule
Peptide from protein
RSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLP
48
null
797
844
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850730
316
Figure 5
Positive
true
null
10000206
null
null
null
null
null
null
null
null
Representative selection
Exact match to reference information
null
2
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149453
F4
FragmentOfANaturalSequenceMolecule
Peptide from protein
RDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQI
50
null
829
878
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850706
34
Figure 2
Negative
false
null
9606
null
null
DOID:2945
null
null
null
null
null
Exact match to reference information
Representative selection
null
1
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149489
F5
FragmentOfANaturalSequenceMolecule
Peptide from protein
TATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKQIANQFNKA
50
null
863
912
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850707
34
Figure 2
Negative
false
null
9606
null
null
DOID:2945
null
null
null
null
null
Exact match to reference information
Representative selection
null
4
315.xml
315
2025-11-06-08:00
15194770
2,004
Identification of an antigenic determinant on the S2 domain of the severe acute respiratory syndrome coronavirus spike glycoprotein capable of inducing neutralizing antibodies.
Journal of virology
Hong Zhang; Guangwen Wang; Jian Li; Yuchun Nie; Xuanling Shi; Gewei Lian; Wei Wang; Xiaolei Yin; Yang Zhao; Xiuxia Qu; Mingxiao Ding; Hongkui Deng
149413
F10
FragmentOfANaturalSequenceMolecule
Peptide from protein
PQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDSFKEELDKYFKNH
48
null
1,094
1,141
228407
AAP30030.1
null
Epitope containing region/antigenic site
Author provided Identifier
BCell
1850708
34
Figure 2
Negative
false
null
9606
null
null
DOID:2945
null
null
null
null
null
Exact match to reference information
Representative selection
null
5
316.xml
316
2025-11-06-08:00
15105530
2,004
Conserved amino acids 193-324 of non-structural protein 3 are a dominant source of peptide determinants for CD4+ and CD8+ T cells in a healthy Japanese encephalitis virus-endemic cohort.
The Journal of general virology
Priti Kumar; Paramadevanapalli Sulochana; Gejjehalli Nirmala; Maganti Haridattatreya; Vijaya Satchidanandam
116289
JEV NS3 (193-324)
FragmentOfANaturalSequenceMolecule
Peptide from protein
DLHPGSGKTRKILPQIIKDAIQQRLRTAVLAPTRVVAAEMAEALRGLPVRYQTSAVQREHQGNEIVDVMCHATLTHRLMSPNRVPNYNLFVMDEAHFTDPASIAARGYIATKVELGEAAAIFMTATPPGTTDPFPDSNAPIH
142
null
1,697
1,838
10001335
AAB18951.1
null
Epitope containing region/antigenic site
Author provided Identifier
TCell
1661035
69
Figures 3B, 4A, C
Positive
true
null
9606
null
5-16 years
DOID:10844
304
null
PBMC
blood
Direct Ex Vivo
Exact match to reference information
Representative selection
null
8
316.xml
316
2025-11-06-08:00
15105530
2,004
Conserved amino acids 193-324 of non-structural protein 3 are a dominant source of peptide determinants for CD4+ and CD8+ T cells in a healthy Japanese encephalitis virus-endemic cohort.
The Journal of general virology
Priti Kumar; Paramadevanapalli Sulochana; Gejjehalli Nirmala; Maganti Haridattatreya; Vijaya Satchidanandam
116289
JEV NS3 (193-324)
FragmentOfANaturalSequenceMolecule
Peptide from protein
DLHPGSGKTRKILPQIIKDAIQQRLRTAVLAPTRVVAAEMAEALRGLPVRYQTSAVQREHQGNEIVDVMCHATLTHRLMSPNRVPNYNLFVMDEAHFTDPASIAARGYIATKVELGEAAAIFMTATPPGTTDPFPDSNAPIH
142
null
1,697
1,838
10001335
AAB18951.1
null
Epitope containing region/antigenic site
Author provided Identifier
TCell
1661039
73
Figure 4B, C
Positive
true
null
9606
null
5-16 years
DOID:10844
null
null
PBMC
blood
Direct Ex Vivo
Exact match to reference information
Representative selection
null
8
316.xml
316
2025-11-06-08:00
15105530
2,004
Conserved amino acids 193-324 of non-structural protein 3 are a dominant source of peptide determinants for CD4+ and CD8+ T cells in a healthy Japanese encephalitis virus-endemic cohort.
The Journal of general virology
Priti Kumar; Paramadevanapalli Sulochana; Gejjehalli Nirmala; Maganti Haridattatreya; Vijaya Satchidanandam
116289
JEV NS3 (193-324)
FragmentOfANaturalSequenceMolecule
Peptide from protein
DLHPGSGKTRKILPQIIKDAIQQRLRTAVLAPTRVVAAEMAEALRGLPVRYQTSAVQREHQGNEIVDVMCHATLTHRLMSPNRVPNYNLFVMDEAHFTDPASIAARGYIATKVELGEAAAIFMTATPPGTTDPFPDSNAPIH
142
null
1,697
1,838
10001335
AAB18951.1
null
Epitope containing region/antigenic site
Author provided Identifier
TCell
1661041
53
Figure 5 and Table 1
Positive
true
null
9606
null
5-16 years
DOID:10844
303
null
T cell CD8+
blood
Direct Ex Vivo
Exact match to reference information
Representative selection
null
8
316.xml
316
2025-11-06-08:00
15105530
2,004
Conserved amino acids 193-324 of non-structural protein 3 are a dominant source of peptide determinants for CD4+ and CD8+ T cells in a healthy Japanese encephalitis virus-endemic cohort.
The Journal of general virology
Priti Kumar; Paramadevanapalli Sulochana; Gejjehalli Nirmala; Maganti Haridattatreya; Vijaya Satchidanandam
116289
JEV NS3 (193-324)
FragmentOfANaturalSequenceMolecule
Peptide from protein
DLHPGSGKTRKILPQIIKDAIQQRLRTAVLAPTRVVAAEMAEALRGLPVRYQTSAVQREHQGNEIVDVMCHATLTHRLMSPNRVPNYNLFVMDEAHFTDPASIAARGYIATKVELGEAAAIFMTATPPGTTDPFPDSNAPIH
142
null
1,697
1,838
10001335
AAB18951.1
null
Epitope containing region/antigenic site
Author provided Identifier
TCell
1661040
53
Figure 5 and Table 1
Positive
true
null
9606
null
5-16 years
DOID:10844
304
null
T cell CD4+
blood
Direct Ex Vivo
Exact match to reference information
Representative selection
null
8
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853201
159
Figures 1, 4 and 5, Table 3
Positive-High
true
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Representative selection
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853202
34
Figure 1, Table 3
Negative
false
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Representative selection
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853203
159
Figures 1, 4 and 5, Table 3
Positive
true
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Exact match to reference information
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853199
159
Figures 2, 3 and 5
Positive
true
null
10000000
F
8-12 weeks
null
null
null
null
null
null
Representative selection
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853204
34
Figure 1, Table 3
Negative
false
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Exact match to reference information
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853194
159
Figures 1, 4 and 5, Table 3
Positive-High
true
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Representative selection
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853195
34
Figure 1, Table 3
Negative
false
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Representative selection
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853196
34
Figures 1 and 4, Table 3
Negative
false
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Representative selection
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853197
34
Figure 1, Table 3
Negative
false
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Representative selection
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853198
308
Table 4, Figure 6
Positive
true
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Representative selection
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853200
159
Figures 2, 3 and 5
Positive
true
null
10000000
F
8 weeks
null
null
null
null
null
null
Representative selection
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853217
159
Figures 2, 3 and 5
Positive
true
null
10000000
F
8 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150075
Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001783
null
null
Repetitive antigenic region
Representative selection
BCell
1853216
159
Figures 2, 3 and 5
Positive
true
null
10000000
F
8-12 weeks
null
null
null
null
null
null
Exact match to reference information
Representative selection
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150759
Deacetylated Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001797
null
null
Repetitive antigenic region
Representative selection
BCell
1853218
159
Figures 2, 3 and 5
Positive
true
null
10000000
F
8 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150759
Deacetylated Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001797
null
null
Repetitive antigenic region
Representative selection
BCell
1853215
159
Figures 1, 4 and 5, Table 3
Positive-High
true
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150759
Deacetylated Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001797
null
null
Repetitive antigenic region
Representative selection
BCell
1853221
159
Figures 2, 3 and 5
Positive
true
null
10000000
F
8-12 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150759
Deacetylated Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001797
null
null
Repetitive antigenic region
Representative selection
BCell
1853212
159
Figures 2, 3 and 5
Positive
true
null
10000000
F
8-12 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150759
Deacetylated Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001797
null
null
Repetitive antigenic region
Representative selection
BCell
1853213
159
Figures 1, 4 and 5, Table 3
Positive-High
true
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Exact match to reference information
Exact match to reference information
null
3
317.xml
317
2026-02-03-08:00
15155652
2,004
Surface plasmon resonance analysis of antipolysaccharide antibody specificity: responses to meningococcal group C conjugate vaccines and bacteria.
Infection and immunity
Pablo A García-Ojeda; Sharon Hardy; Steven Kozlowski; Kathryn E Stein; Ian M Feavers
150759
Deacetylated Meningococcal C polysaccharide repeating unit
FragmentOfANaturalNonSequenceMolecule
Carbohydrate fragment
null
null
null
null
null
10001797
null
null
Repetitive antigenic region
Representative selection
BCell
1853209
34
Figure 1, Table 3
Negative
false
null
10000000
F
6-8 weeks
null
null
null
null
null
null
Exact match to reference information
Representative selection
null
3