| # Server initial-data upload scope |
|
|
| Source: `/root/autodl-tmp/bio/` on `connect.cqa1.seetacloud.com`. |
|
|
| This package contains the server-side initial/source resources that were not |
| already present in the GraphResidual dataset repository: |
|
|
| - top-level ClinVar, Reactome, UniProt, PTM, GTEx, MC3, and final ClinVar tables; |
| - `brca_tcga_pan_can_atlas_2018/` source molecular and clinical tables; |
| - `clinvar_strict_rebuild_v1/` graph inputs, nodes, edges, mappings, splits, |
| provenance tables, and removal ledgers; |
| - `clinvar_strict_rebuild_audit/` source manifests and audit tables; |
| - `inductive_graph_residual_extension/` inductive graph datasets, splits, |
| feature inventories, and contracts; |
| - retained raw-download copies under `data_raw_download/`, |
| `data_raw_partial/`, and `data_raw_scp/`. |
|
|
| Excluded from this upload: images and figures, logs, caches, Python bytecode, |
| code snapshots, model checkpoints, embeddings, predictions, and experiment- |
| only output directories. Empty disease-specific directories were not created |
| in the repository because they contain no files. |
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|
