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"citation": "",
"description": "\n Causal eQTL identification dataset for LOL-EVE model evaluation.\n \n This dataset contains indel variants in promoter regions with:\n - Gene expression data (PIP scores)\n - Basic functional annotations (PhyloP, CADD)\n - Sequence information (WT and variant sequences)\n - Genomic coordinates and variant information\n \n The dataset is designed for evaluating variant effect prediction models\n on causal eQTL identification tasks.\n ",
"features": {
"gene": {
"dtype": "string",
"_type": "Value"
},
"species": {
"dtype": "string",
"_type": "Value"
},
"clade": {
"dtype": "string",
"_type": "Value"
},
"chromosome": {
"dtype": "string",
"_type": "Value"
},
"position": {
"dtype": "int64",
"_type": "Value"
},
"ref": {
"dtype": "string",
"_type": "Value"
},
"alt": {
"dtype": "string",
"_type": "Value"
},
"variant_type": {
"dtype": "string",
"_type": "Value"
},
"wt_sequence": {
"dtype": "string",
"_type": "Value"
},
"var_sequence": {
"dtype": "string",
"_type": "Value"
},
"sequence_length": {
"dtype": "int64",
"_type": "Value"
},
"wt_sequence_start": {
"dtype": "int64",
"_type": "Value"
},
"pip": {
"dtype": "float32",
"_type": "Value"
},
"indel_length": {
"dtype": "int64",
"_type": "Value"
},
"distance_tss": {
"dtype": "int64",
"_type": "Value"
},
"gsa_depth": {
"dtype": "int64",
"_type": "Value"
},
"depth_category": {
"dtype": "string",
"_type": "Value"
},
"phylop": {
"dtype": "float32",
"_type": "Value"
},
"cadd": {
"dtype": "float32",
"_type": "Value"
},
"gc_percentage_delta": {
"dtype": "float32",
"_type": "Value"
}
},
"homepage": "https://huggingface.co/Marks-lab/LOL-EVE",
"license": "mit"
} |