| language: | |
| - en | |
| tags: | |
| - biology | |
| - RNA | |
| - fitness | |
| configs: | |
| - config_name: default | |
| data_files: | |
| - split: fitness | |
| path: fitness_prediction/**/*.parquet | |
| - split: secondary_structure | |
| path: secondary_structure_prediction/**/*.parquet | |
| - split: tertiary_structure | |
| path: tertiary_structure_prediction/*.parquet | |
| license: cc-by-4.0 | |
| # 🧬 RNAGym | |
| **Benchmark suite for RNA fitness & structure prediction** | |
| RNAGym brings together >1 M mutational fitness measurements and curated RNA structure datasets in a single place. This Hugging Face repo lets you: | |
| * **Download fitness benchmark data** | |
| * **Download secondary structure benchmark data** | |
| * **Download tertiary structure benchmark data** | |
| --- | |
| ## Contents | |
| | Folder | Purpose | | |
| |--------|---------| | |
| | `fitness_prediction/` | All mutation-fitness assays | | |
| | `secondary_structure_prediction/` | Secondary Structure Datasets | | |
| | `tertiary_structure_prediction/` | Tertiary Structure Datasets | | |
| ## Scripts | |
| Scripts and code for running all baseline benchmarks are available at https://github.com/MarksLab-DasLab/RNAGym | |