task_id stringlengths 29 66 | category stringclasses 17
values | task_name stringlengths 21 47 | source_prefix stringclasses 5
values | source_id stringlengths 13 31 | variant stringclasses 15
values | base_task_name stringlengths 21 39 | is_synthetic bool 2
classes | difficulty stringclasses 2
values | question large_stringlengths 591 2.13k | p_value float64 0 0.99 | decision stringclasses 2
values | dataset_path stringlengths 47 84 | question_path stringlengths 48 85 | answer_key_path stringlengths 51 88 | num_rows int64 29 1.03M | num_columns int32 2 517 | columns listlengths 2 517 | dataset_bytes int64 465 69.1M | dataset_sha256 stringlengths 64 64 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
iv_2sls/dfeep__paper_66__task_7 | iv_2sls | dfeep__paper_66__task_7 | dfeep | dfeep__paper_66 | null | dfeep__paper_66__task_7 | false | Hard | Research Question:
Among households in the high-probability-to-borrow study sample, does microcredit take-up affect income from dependent (wage) employment?
Hypothesis:
H0: Microcredit take-up does not affect income from dependent employment among households in the study sample.
H1: Microcredit take-up affects income ... | 0.026 | reject | tasks/iv_2sls/dfeep__paper_66__task_7/dataset.csv | tasks/iv_2sls/dfeep__paper_66__task_7/question.txt | tasks/iv_2sls/dfeep__paper_66__task_7/answer_key.json | 4,934 | 21 | [
"treatment",
"paire",
"demi_paire",
"client",
"ccm_resp_activ",
"other_resp_activ",
"income_dep",
"borrowed_total_bl",
"act_livestock_bl",
"act_business_bl",
"members_resid_bl",
"nadults_resid_bl",
"head_age_bl",
"head_age_d_bl",
"members_resid_d_bl",
"nadults_resid_d_bl",
"act_lives... | 241,541 | d8ec5d7436fb2ddbaee292060aa4e25891f65fcbddae0825c6b48f1e7d905ec0 |
iv_2sls/dfeep__paper_70__task_8 | iv_2sls | dfeep__paper_70__task_8 | dfeep | dfeep__paper_70 | null | dfeep__paper_70__task_8 | false | Hard | Research Question:
Among children in the Bihar summer camp sample, does actual attendance at the summer learning camp affect midline reading performance?
Hypothesis:
H0: Attending the summer camp has no effect on midline reading performance.
H1: Attending the summer camp affects midline reading performance.
STUDY DES... | 0.044 | reject | tasks/iv_2sls/dfeep__paper_70__task_8/dataset.csv | tasks/iv_2sls/dfeep__paper_70__task_8/question.txt | tasks/iv_2sls/dfeep__paper_70__task_8/answer_key.json | 3,126 | 11 | [
"villageid",
"female",
"age_year",
"base_standard",
"control",
"treatvillage",
"attended_sc",
"base_aser_read_score",
"base_aser_math_score",
"mid_aser_read_score",
"mid_aser_math_score"
] | 266,620 | 860bdfce5ed5bbe815a3be5d7ad9c7165abb6dba81d1182c8dbef49d89098cc9 |
kruskal_wallis_test/biodsa__brca_tcga_pub2015__task_72 | kruskal_wallis_test | biodsa__brca_tcga_pub2015__task_72 | biodsa | biodsa__brca_tcga_pub2015 | null | biodsa__brca_tcga_pub2015__task_72 | false | Hard | Research Question:
Does Tumor Mutational Burden (nonsynonymous) differ across detailed stage categories in the Breast Invasive Carcinoma (TCGA, Cell 2015) cohort?
Hypothesis:
H0: Tumor Mutational Burden (nonsynonymous) is the same across all stage_detail categories
H1: Tumor Mutational Burden (nonsynonymous) differs f... | 0.03917 | reject | tasks/kruskal_wallis_test/biodsa__brca_tcga_pub2015__task_72/dataset.csv | tasks/kruskal_wallis_test/biodsa__brca_tcga_pub2015__task_72/question.txt | tasks/kruskal_wallis_test/biodsa__brca_tcga_pub2015__task_72/answer_key.json | 798 | 4 | [
"sample_id",
"patient_id",
"tmb_nonsynonymous",
"stage_detail"
] | 39,268 | 638caae645bba108608153f9f106d4371f644ce02267291923047144b9b8f00c |
kruskal_wallis_test/biodsa__brca_tcga_pub2015__task_75 | kruskal_wallis_test | biodsa__brca_tcga_pub2015__task_75 | biodsa | biodsa__brca_tcga_pub2015 | null | biodsa__brca_tcga_pub2015__task_75 | false | Hard | Research Question:
Among samples from the TCGA Breast Invasive Carcinoma cohort, does diagnosis age differ across detailed stage groups defined as Early (I), Early (II), and Late (III)?
Hypothesis:
H0: The distribution of diagnosis age is the same across the Early (I), Early (II), and Late (III) stage groups.
H1: The ... | 0.081845 | fail_to_reject | tasks/kruskal_wallis_test/biodsa__brca_tcga_pub2015__task_75/dataset.csv | tasks/kruskal_wallis_test/biodsa__brca_tcga_pub2015__task_75/question.txt | tasks/kruskal_wallis_test/biodsa__brca_tcga_pub2015__task_75/answer_key.json | 798 | 4 | [
"sample_id",
"patient_id",
"age",
"stage_detail"
] | 35,796 | e0970439c6fd820c080dbc646ca0442c5db0a0a2c0cce593cc123dbb38cf4874 |
kruskal_wallis_test/biodsa__mel_mskimpact_2020__task_2 | kruskal_wallis_test | biodsa__mel_mskimpact_2020__task_2 | biodsa | biodsa__mel_mskimpact_2020 | null | biodsa__mel_mskimpact_2020__task_2 | false | Hard | Research Question:
Does tumor mutational burden differ across MAPK driver classes among melanoma patients in the MSK-IMPACT cohort?
Hypothesis:
H0: Tumor mutational burden is the same across all MAPK driver classes
H1: Tumor mutational burden differs across at least one MAPK driver class
STUDY DESIGN:
- Type: Observa... | 0 | reject | tasks/kruskal_wallis_test/biodsa__mel_mskimpact_2020__task_2/dataset.csv | tasks/kruskal_wallis_test/biodsa__mel_mskimpact_2020__task_2/question.txt | tasks/kruskal_wallis_test/biodsa__mel_mskimpact_2020__task_2/answer_key.json | 696 | 17 | [
"sample_id",
"patient_id",
"sex",
"age_at_diagnosis",
"driver_class",
"primary_site",
"cancer_type_detailed",
"sample_type",
"tmb_nonsynonymous",
"mutation_count",
"fraction_genome_altered",
"os_status",
"ttf_months",
"ajcc_7th",
"ecog",
"ldh_abnormal",
"ulceration"
] | 92,880 | a0697d25216c5801b7a5f62f7dd516297ec01e0571b2f6954bdb9b0d7083fce7 |
kruskal_wallis_test/biodsa__msk_met_2021__task_242 | kruskal_wallis_test | biodsa__msk_met_2021__task_242 | biodsa | biodsa__msk_met_2021 | null | biodsa__msk_met_2021__task_242 | false | Hard | Research Question:
Does Tumor Mutational Burden (nonsynonymous) differ across the major cancer type groups (Bladder, Breast, CRC, NSCLC, Prostate) in the MSK-MET pan-cancer cohort?
Hypothesis:
H0: The distribution of Tumor Mutational Burden (nonsynonymous) is the same across all cancer type groups.
H1: The distributio... | 0 | reject | tasks/kruskal_wallis_test/biodsa__msk_met_2021__task_242/dataset.csv | tasks/kruskal_wallis_test/biodsa__msk_met_2021__task_242/question.txt | tasks/kruskal_wallis_test/biodsa__msk_met_2021__task_242/answer_key.json | 14,197 | 5 | [
"sample_id",
"cancer_type",
"cancer_type_group",
"tmb_nonsynonymous",
"sample_type"
] | 961,948 | 7aa9ae310940c09ae6b31331eb005c164fa5bb884bd293c569d2adc6c72cbd9d |
kruskal_wallis_test/biodsa__skcm_tcga__task_58 | kruskal_wallis_test | biodsa__skcm_tcga__task_58 | biodsa | biodsa__skcm_tcga | null | biodsa__skcm_tcga__task_58 | false | Hard | Research Question:
Do tumor mutation counts differ across genomic mutation subtypes among tumors in the TCGA cutaneous melanoma cohort?
Hypothesis:
H0: The distribution of tumor mutation count is the same across mutation_subtype groups
H1: The distribution of tumor mutation count differs for at least one mutation_subt... | 0 | reject | tasks/kruskal_wallis_test/biodsa__skcm_tcga__task_58/dataset.csv | tasks/kruskal_wallis_test/biodsa__skcm_tcga__task_58/question.txt | tasks/kruskal_wallis_test/biodsa__skcm_tcga__task_58/answer_key.json | 366 | 2 | [
"mutation_count",
"mutation_subtype"
] | 4,184 | 1be46905f87afbca69c329b99a3e331941f0381a13c193716cdd2899ba272325 |
kruskal_wallis_test/biodsa__skcm_tcga__task_59 | kruskal_wallis_test | biodsa__skcm_tcga__task_59 | biodsa | biodsa__skcm_tcga | null | biodsa__skcm_tcga__task_59 | false | Hard | Research Question:
Does patient age differ across mutation_subtype groups in the TCGA cutaneous melanoma cohort?
Hypothesis:
H0: The age distribution is the same across all mutation_subtype groups
H1: The age distribution differs for at least one mutation_subtype group
STUDY DESIGN:
- Type: Observational cancer genom... | 0.000001 | reject | tasks/kruskal_wallis_test/biodsa__skcm_tcga__task_59/dataset.csv | tasks/kruskal_wallis_test/biodsa__skcm_tcga__task_59/question.txt | tasks/kruskal_wallis_test/biodsa__skcm_tcga__task_59/answer_key.json | 462 | 2 | [
"age",
"mutation_subtype"
] | 5,313 | da409a7c912cee7dcc40313ce4adaab875e1196e27bac659e255c562a5d00fe1 |
log_rank_test/biodsa__blca_mskcc_solit_2014__task_2 | log_rank_test | biodsa__blca_mskcc_solit_2014__task_2 | biodsa | biodsa__blca_mskcc_solit_2014 | null | biodsa__blca_mskcc_solit_2014__task_2 | false | Easy | Research Question:
Among high-grade urothelial carcinoma of the bladder tumors, is PIK3CA mutation status associated with recurrence-free survival among radical cystectomy patients with recurrence follow-up data?
Hypothesis:
H0: Recurrence-free survival is the same for PIK3CA-mutated and PIK3CA wild-type radical cyste... | 0.014 | reject | tasks/log_rank_test/biodsa__blca_mskcc_solit_2014__task_2/dataset.csv | tasks/log_rank_test/biodsa__blca_mskcc_solit_2014__task_2/question.txt | tasks/log_rank_test/biodsa__blca_mskcc_solit_2014__task_2/answer_key.json | 109 | 12 | [
"patient_id",
"sample_id",
"pik3ca_mutated",
"path_t_stage",
"surgery_procedure",
"sex",
"age",
"dfs_months",
"dfs_status",
"os_months",
"os_status",
"mutation_count"
] | 10,000 | a5818ec07fcc55c6daff676572ff64ae111063c9b6f82183894fa9a0611b48d9 |
log_rank_test/biodsa__blca_tcga_pub_2017__task_87 | log_rank_test | biodsa__blca_tcga_pub_2017__task_87 | biodsa | biodsa__blca_tcga_pub_2017 | null | biodsa__blca_tcga_pub_2017__task_87 | false | Easy | Research Question:
Is RB1 mutation status associated with overall survival among patients with muscle-invasive bladder cancer in the TCGA bladder cancer cohort?
Hypothesis:
H0: Overall survival does not differ between RB1-mutated and RB1-wildtype patients
H1: Overall survival differs between RB1-mutated and RB1-wildty... | 0.198723 | fail_to_reject | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_87/dataset.csv | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_87/question.txt | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_87/answer_key.json | 408 | 5 | [
"sample_id",
"patient_id",
"OS_MONTHS",
"OS_EVENT",
"RB1_mutated"
] | 15,837 | e1f74e17234f0adc6483ab7c14088103e5eb7ef21cf59f3734d13ba8fbef79ac |
log_rank_test/biodsa__blca_tcga_pub_2017__task_88 | log_rank_test | biodsa__blca_tcga_pub_2017__task_88 | biodsa | biodsa__blca_tcga_pub_2017 | null | biodsa__blca_tcga_pub_2017__task_88 | false | Easy | Research Question:
Is KRAS mutation status associated with disease-free survival among patients with muscle-invasive bladder cancer in the TCGA bladder cancer cohort?
Hypothesis:
H0: Disease-free survival does not differ between KRAS-mutated and KRAS-wildtype patients
H1: Disease-free survival differs between KRAS-mut... | 0.055096 | fail_to_reject | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_88/dataset.csv | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_88/question.txt | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_88/answer_key.json | 321 | 5 | [
"sample_id",
"patient_id",
"DFS_MONTHS",
"DFS_EVENT",
"KRAS_mutated"
] | 12,468 | 50909e9f90d8dcb54927c6c1c09afe91a16bf5fcb8a15bfb190c2cce5839f330 |
log_rank_test/biodsa__blca_tcga_pub_2017__task_97 | log_rank_test | biodsa__blca_tcga_pub_2017__task_97 | biodsa | biodsa__blca_tcga_pub_2017 | null | biodsa__blca_tcga_pub_2017__task_97 | false | Easy | Research Question:
Do patients in the TCGA bladder cancer cohort with high mutation count have different overall survival than patients with low mutation count?
Hypothesis:
H0: Overall survival is the same for patients with high mutation count and low mutation count
H1: Overall survival differs between patients with h... | 0.000089 | reject | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_97/dataset.csv | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_97/question.txt | tasks/log_rank_test/biodsa__blca_tcga_pub_2017__task_97/answer_key.json | 409 | 3 | [
"os_months",
"os_event",
"mutation_count_high"
] | 5,637 | 33c443c36988d3ba42b6d4e86a3d0795b15717a5353ad3ec9a490376556ea907 |
log_rank_test/biodsa__breast_msk_2018__task_129 | log_rank_test | biodsa__breast_msk_2018__task_129 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_129 | false | Easy | Research Question:
Is overall survival different between patients with PIK3CA-mutated tumors and patients without PIK3CA-mutated tumors in the MSK 2018 breast cancer cohort?
Hypothesis:
H0: Overall survival is the same between patients with PIK3CA-mutated tumors and patients without PIK3CA-mutated tumors
H1: Overall s... | 0.024495 | reject | tasks/log_rank_test/biodsa__breast_msk_2018__task_129/dataset.csv | tasks/log_rank_test/biodsa__breast_msk_2018__task_129/question.txt | tasks/log_rank_test/biodsa__breast_msk_2018__task_129/answer_key.json | 1,756 | 3 | [
"os_months",
"os_event",
"pik3ca_mutated"
] | 15,904 | fba3d80ec17029fb29bc1c4a8d526d4e710880c15251d34e45d72812f7fd7196 |
log_rank_test/biodsa__chol_msk_2018__task_64 | log_rank_test | biodsa__chol_msk_2018__task_64 | biodsa | biodsa__chol_msk_2018 | null | biodsa__chol_msk_2018__task_64 | false | Easy | Research Question:
Among patients in the MSK 2018 cholangiocarcinoma cohort, does overall survival differ by KRAS mutation status?
Hypothesis:
H0: Overall survival is the same for patients with and without KRAS mutations
H1: Overall survival differs between patients with and without KRAS mutations
STUDY DESIGN:
- Typ... | 0.162727 | fail_to_reject | tasks/log_rank_test/biodsa__chol_msk_2018__task_64/dataset.csv | tasks/log_rank_test/biodsa__chol_msk_2018__task_64/question.txt | tasks/log_rank_test/biodsa__chol_msk_2018__task_64/answer_key.json | 192 | 3 | [
"os_months",
"os_event",
"kras_mutated"
] | 2,371 | a9c81fee88f45cdea578d3f534e8c664b7291eeac9bdee8562e52e3143fa2d8d |
log_rank_test/biodsa__gbm_tcga_pub2013__task_30 | log_rank_test | biodsa__gbm_tcga_pub2013__task_30 | biodsa | biodsa__gbm_tcga_pub2013 | null | biodsa__gbm_tcga_pub2013__task_30 | false | Easy | Research Question:
Among patients with glioblastoma multiforme in the TCGA GBM cohort, is overall survival different between tumors classified as G-CIMP positive and those not classified as G-CIMP positive?
Hypothesis:
H0: Overall survival is the same for G-CIMP positive and G-CIMP negative groups
H1: Overall survival... | 0 | reject | tasks/log_rank_test/biodsa__gbm_tcga_pub2013__task_30/dataset.csv | tasks/log_rank_test/biodsa__gbm_tcga_pub2013__task_30/question.txt | tasks/log_rank_test/biodsa__gbm_tcga_pub2013__task_30/answer_key.json | 530 | 3 | [
"os_months",
"os_event",
"gcimp_positive"
] | 6,678 | bcbfd352efbba62b1b1023dc679b3362931ce2ac412e480ee2b683503120f348 |
log_rank_test/biodsa__gbm_tcga_pub2013__task_31 | log_rank_test | biodsa__gbm_tcga_pub2013__task_31 | biodsa | biodsa__gbm_tcga_pub2013 | null | biodsa__gbm_tcga_pub2013__task_31 | false | Easy | Research Question:
Is overall survival different between glioblastoma multiforme patients younger than 50 years and those aged 50 years or older in the TCGA GBM cohort?
Hypothesis:
H0: Overall survival is the same in GBM patients younger than 50 years and those aged 50 years or older
H1: Overall survival differs betwe... | 0 | reject | tasks/log_rank_test/biodsa__gbm_tcga_pub2013__task_31/dataset.csv | tasks/log_rank_test/biodsa__gbm_tcga_pub2013__task_31/question.txt | tasks/log_rank_test/biodsa__gbm_tcga_pub2013__task_31/answer_key.json | 541 | 3 | [
"os_months",
"os_event",
"age_lt50"
] | 6,812 | 9b6e0a94469fa9d9f1ae8072d3eea06b5bf8f6473a3a7e710575bb87a6c914ff |
log_rank_test/biodsa__lgggbm_tcga_pub__task_7 | log_rank_test | biodsa__lgggbm_tcga_pub__task_7 | biodsa | biodsa__lgggbm_tcga_pub | null | biodsa__lgggbm_tcga_pub__task_7 | false | Easy | Research Question:
Is TP53 mutation status associated with overall survival among patients with diffuse glioma, including lower-grade glioma and glioblastoma, in the TCGA diffuse glioma cohort?
Hypothesis:
H0: Overall survival does not differ between TP53-mutated and TP53-wildtype diffuse glioma patients
H1: Overall s... | 0.000001 | reject | tasks/log_rank_test/biodsa__lgggbm_tcga_pub__task_7/dataset.csv | tasks/log_rank_test/biodsa__lgggbm_tcga_pub__task_7/question.txt | tasks/log_rank_test/biodsa__lgggbm_tcga_pub__task_7/answer_key.json | 739 | 5 | [
"sample_id",
"patient_id",
"OS_MONTHS",
"OS_EVENT",
"TP53_mutated"
] | 27,816 | ddacd1943dae3b8b9a1583e7b0c0dcdd183044fbeb4535aefcee5cf29f9ce7e0 |
log_rank_test/biodsa__lihc_amc_prv__task_2 | log_rank_test | biodsa__lihc_amc_prv__task_2 | biodsa | biodsa__lihc_amc_prv | null | biodsa__lihc_amc_prv__task_2 | false | Easy | Research Question:
Do hepatocellular carcinoma patients with RB1 mutations have different recurrence-free survival outcomes than patients without RB1 mutations?
Hypothesis:
H0: Recurrence-free survival does not differ between RB1-mutated and RB1 wild-type hepatocellular carcinoma patients.
H1: Recurrence-free survival... | 0.000717 | reject | tasks/log_rank_test/biodsa__lihc_amc_prv__task_2/dataset.csv | tasks/log_rank_test/biodsa__lihc_amc_prv__task_2/question.txt | tasks/log_rank_test/biodsa__lihc_amc_prv__task_2/answer_key.json | 231 | 8 | [
"patient_id",
"sample_id",
"dfs_months",
"dfs_status",
"age",
"histological_subtype",
"grade",
"rb1_mutated"
] | 8,540 | eacdd576d4a81a0d47e8b9121fe08642eb13f8e6c9a7151a1665ab89807009e9 |
log_rank_test/biodsa__lihc_tcga_pub__task_11 | log_rank_test | biodsa__lihc_tcga_pub__task_11 | biodsa | biodsa__lihc_tcga_pub | null | biodsa__lihc_tcga_pub__task_11 | false | Easy | Research Question:
Among hepatocellular carcinoma patients in the TCGA LIHC study, is ARID1A somatic mutation status associated with disease-free survival?
Hypothesis:
H0: Disease-free survival does not differ between ARID1A-mutated and ARID1A-wildtype patients.
H1: Disease-free survival differs between ARID1A-mutated... | 0.087074 | fail_to_reject | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_11/dataset.csv | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_11/question.txt | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_11/answer_key.json | 317 | 5 | [
"sample_id",
"patient_id",
"DFS_MONTHS",
"DFS_EVENT",
"ARID1A_mutated"
] | 12,277 | 381814b3f98bf6dabaeefcba2cc72e4e02406cb5aacf45c208e04204dd4a8c40 |
log_rank_test/biodsa__lihc_tcga_pub__task_5 | log_rank_test | biodsa__lihc_tcga_pub__task_5 | biodsa | biodsa__lihc_tcga_pub | null | biodsa__lihc_tcga_pub__task_5 | false | Easy | Research Question:
Is CDKN2A mutation status associated with overall survival among patients with hepatocellular carcinoma in the TCGA LIHC cohort?
Hypothesis:
H0: Overall survival does not differ between CDKN2A-mutated and CDKN2A-wildtype patients
H1: Overall survival differs between CDKN2A-mutated and CDKN2A-wildtyp... | 0.168642 | fail_to_reject | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_5/dataset.csv | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_5/question.txt | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_5/answer_key.json | 367 | 5 | [
"sample_id",
"patient_id",
"OS_MONTHS",
"OS_EVENT",
"CDKN2A_mutated"
] | 14,253 | ff5851bf5658803015e58fe7dca7dc7eb982b7030f07b1ab5ed25351339d6ff2 |
log_rank_test/biodsa__lihc_tcga_pub__task_9 | log_rank_test | biodsa__lihc_tcga_pub__task_9 | biodsa | biodsa__lihc_tcga_pub | null | biodsa__lihc_tcga_pub__task_9 | false | Easy | Research Question:
Is PTEN mutation status associated with disease-free survival among patients with hepatocellular carcinoma in the TCGA LIHC study cohort?
Hypothesis:
H0: Disease-free survival is the same for PTEN-mutated and PTEN-wildtype hepatocellular carcinoma patients
H1: Disease-free survival differs between P... | 0.133967 | fail_to_reject | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_9/dataset.csv | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_9/question.txt | tasks/log_rank_test/biodsa__lihc_tcga_pub__task_9/answer_key.json | 317 | 5 | [
"sample_id",
"patient_id",
"DFS_MONTHS",
"DFS_EVENT",
"PTEN_mutated"
] | 12,275 | 0784ce862329a1ca04147ac27527fc51981e59d915b26fbc9d3e2a2caa56500b |
log_rank_test/biodsa__luad_tcga_pub__task_39 | log_rank_test | biodsa__luad_tcga_pub__task_39 | biodsa | biodsa__luad_tcga_pub | null | biodsa__luad_tcga_pub__task_39 | false | Easy | Research Question:
Is TP53 mutation status associated with overall survival among patients with lung adenocarcinoma in the TCGA lung adenocarcinoma cohort?
Hypothesis:
H0: Overall survival does not differ between TP53-mutated and TP53-wildtype patients with lung adenocarcinoma.
H1: Overall survival differs between TP5... | 0.01716 | reject | tasks/log_rank_test/biodsa__luad_tcga_pub__task_39/dataset.csv | tasks/log_rank_test/biodsa__luad_tcga_pub__task_39/question.txt | tasks/log_rank_test/biodsa__luad_tcga_pub__task_39/answer_key.json | 203 | 5 | [
"sample_id",
"patient_id",
"OS_MONTHS",
"OS_EVENT",
"TP53_mutated"
] | 7,876 | 2d6287adafba69a3690e7a7f32953b35af29d321d403c3fb4f29eed6675f9821 |
log_rank_test/biodsa__msk_met_2021__task_245 | log_rank_test | biodsa__msk_met_2021__task_245 | biodsa | biodsa__msk_met_2021 | null | biodsa__msk_met_2021__task_245 | false | Easy | Research Question:
Among tumors in the MSK MetTropism (MSK, Cell 2021) cohort, is overall survival associated with TP53 mutation status?
Hypothesis:
H0: Overall survival does not differ by TP53 mutation status
H1: Overall survival differs by TP53 mutation status
STUDY DESIGN:
- Type: Observational tumor sequencing co... | 0 | reject | tasks/log_rank_test/biodsa__msk_met_2021__task_245/dataset.csv | tasks/log_rank_test/biodsa__msk_met_2021__task_245/question.txt | tasks/log_rank_test/biodsa__msk_met_2021__task_245/answer_key.json | 25,659 | 3 | [
"os_months",
"os_event",
"tp53_mutated"
] | 245,881 | 9860a47a19712c419fb0705f59bf22749f3bb7a2e4e5e81021da31b629dcea46 |
log_rank_test/biodsa__msk_met_2021__task_246 | log_rank_test | biodsa__msk_met_2021__task_246 | biodsa | biodsa__msk_met_2021 | null | biodsa__msk_met_2021__task_246 | false | Easy | Research Question:
Among patients in the MSK MetTropism cohort, is overall survival different between tumors with and without KRAS mutation?
Hypothesis:
H0: Overall survival does not differ between KRAS-mutated and KRAS-wild-type cases
H1: Overall survival differs between KRAS-mutated and KRAS-wild-type cases
STUDY D... | 0 | reject | tasks/log_rank_test/biodsa__msk_met_2021__task_246/dataset.csv | tasks/log_rank_test/biodsa__msk_met_2021__task_246/question.txt | tasks/log_rank_test/biodsa__msk_met_2021__task_246/answer_key.json | 25,659 | 3 | [
"os_months",
"os_event",
"kras_mutated"
] | 245,881 | fd96bc8b6d88f313a5e5f52c3ae8fcde7df301eb2a0ce06c242184e537699097 |
log_rank_test/biodsa__nsclc_pd1_msk_2018__task_15 | log_rank_test | biodsa__nsclc_pd1_msk_2018__task_15 | biodsa | biodsa__nsclc_pd1_msk_2018 | null | biodsa__nsclc_pd1_msk_2018__task_15 | false | Easy | Research Question:
Among patients with non-small-cell lung cancer treated with anti-PD-(L)1 immunotherapy in the MSK cohort, does progression-free survival differ between TP53-mutant and TP53-wildtype patients?
Hypothesis:
H0: Progression-free survival does not differ between TP53-mutant and TP53-wildtype patients.
H1... | 0.00269 | reject | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_15/dataset.csv | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_15/question.txt | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_15/answer_key.json | 240 | 10 | [
"patient_id",
"sample_id",
"tp53_mutated",
"pfs_months",
"pfs_status",
"pfs_event",
"tmb_nonsynonymous",
"durable_clinical_benefit",
"smoker",
"sex"
] | 18,743 | 569027d036b9f0abf5f7e49839d824fa0f2c02f03191ba6442673b51c86a5cad |
log_rank_test/biodsa__nsclc_pd1_msk_2018__task_16 | log_rank_test | biodsa__nsclc_pd1_msk_2018__task_16 | biodsa | biodsa__nsclc_pd1_msk_2018 | null | biodsa__nsclc_pd1_msk_2018__task_16 | false | Easy | Research Question:
Among patients with non-small-cell lung cancer treated with anti-PD-(L)1 immunotherapy in the MSK cohort, does progression-free survival differ between EGFR-mutant and EGFR-wildtype patients?
Hypothesis:
H0: Progression-free survival is the same in EGFR-mutant and EGFR-wildtype patients.
H1: Progres... | 0.036872 | reject | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_16/dataset.csv | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_16/question.txt | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_16/answer_key.json | 240 | 10 | [
"patient_id",
"sample_id",
"egfr_mutated",
"pfs_months",
"pfs_status",
"pfs_event",
"tmb_nonsynonymous",
"durable_clinical_benefit",
"smoker",
"sex"
] | 18,743 | 783defbb34b6dfdbb4f127e3f020fa3bef0dc9ad7c6c626a2a5889d437a4b058 |
log_rank_test/biodsa__nsclc_pd1_msk_2018__task_3 | log_rank_test | biodsa__nsclc_pd1_msk_2018__task_3 | biodsa | biodsa__nsclc_pd1_msk_2018 | null | biodsa__nsclc_pd1_msk_2018__task_3 | false | Easy | Research Question:
Among NSCLC patients treated with anti-PD-1/PD-L1 immunotherapy and with available PD-L1 measurement, is progression-free survival different between patients with PD-L1 positive tumors and those with PD-L1 negative tumors?
Hypothesis:
H0: Progression-free survival is the same between PD-L1 positive ... | 0.011 | reject | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_3/dataset.csv | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_3/question.txt | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_3/answer_key.json | 240 | 12 | [
"patient_id",
"sample_id",
"pdl1_score",
"pfs_months",
"pfs_status",
"durable_clinical_benefit",
"sex",
"age",
"smoker",
"tmb_nonsynonymous",
"cancer_type_detailed",
"treatment_type"
] | 27,257 | 14addc8dffec36f195254b3a4fb5e688153f3b5d2093cdb61b81667ad0a6c375 |
log_rank_test/biodsa__nsclc_pd1_msk_2018__task_7 | log_rank_test | biodsa__nsclc_pd1_msk_2018__task_7 | biodsa | biodsa__nsclc_pd1_msk_2018 | null | biodsa__nsclc_pd1_msk_2018__task_7 | false | Easy | Research Question:
Among NSCLC patients treated with anti-PD-(L)1 immunotherapy, do patients with tumor mutation burden at or above the cohort median have longer progression-free survival than patients below the cohort median?
Hypothesis:
H0: Progression-free survival is the same for patients with tumor mutation burde... | 0.024 | reject | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_7/dataset.csv | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_7/question.txt | tasks/log_rank_test/biodsa__nsclc_pd1_msk_2018__task_7/answer_key.json | 240 | 12 | [
"patient_id",
"sample_id",
"tmb_nonsynonymous",
"durable_clinical_benefit",
"sex",
"age",
"smoker",
"pdl1_score",
"pfs_months",
"pfs_status",
"cancer_type_detailed",
"treatment_type"
] | 27,257 | c5b0317071a09f7fbf914117b329d2098f2830aa388bb012d2797521a00c07df |
log_rank_test/biodsa__ov_tcga_pub__task_10 | log_rank_test | biodsa__ov_tcga_pub__task_10 | biodsa | biodsa__ov_tcga_pub | null | biodsa__ov_tcga_pub__task_10 | false | Easy | Research Question:
Does overall survival differ between FAT3-mutated and FAT3-wild-type patients in high-grade serous ovarian cancer?
Hypothesis:
H0: Overall survival is the same for FAT3-mutated and FAT3-wild-type patients with high-grade serous ovarian cancer
H1: Overall survival differs between FAT3-mutated and FAT... | 0.084985 | fail_to_reject | tasks/log_rank_test/biodsa__ov_tcga_pub__task_10/dataset.csv | tasks/log_rank_test/biodsa__ov_tcga_pub__task_10/question.txt | tasks/log_rank_test/biodsa__ov_tcga_pub__task_10/answer_key.json | 315 | 4 | [
"sample_id",
"fat3_mutated",
"os_months",
"os_status"
] | 8,140 | 11b7e23597e3c4dc6141697afafcd67479f7ca1e9718da8cc6afb6de03945621 |
log_rank_test/biodsa__ov_tcga_pub__task_11 | log_rank_test | biodsa__ov_tcga_pub__task_11 | biodsa | biodsa__ov_tcga_pub | null | biodsa__ov_tcga_pub__task_11 | false | Easy | Research Question:
Does disease-free survival differ between TP53-mutated and TP53-wild-type high-grade serous ovarian cancer cases in the TCGA cohort?
Hypothesis:
H0: Disease-free survival is the same for TP53-mutated and TP53-wild-type high-grade serous ovarian cancer cases
H1: Disease-free survival differs between ... | 0.022112 | reject | tasks/log_rank_test/biodsa__ov_tcga_pub__task_11/dataset.csv | tasks/log_rank_test/biodsa__ov_tcga_pub__task_11/question.txt | tasks/log_rank_test/biodsa__ov_tcga_pub__task_11/answer_key.json | 260 | 4 | [
"sample_id",
"tp53_mutated",
"dfs_months",
"dfs_status"
] | 6,693 | dcc6184d50d8f5472f14d1ddf632e23cfe75653e11fc18138764cc9d083980d3 |
log_rank_test/biodsa__ov_tcga_pub__task_9 | log_rank_test | biodsa__ov_tcga_pub__task_9 | biodsa | biodsa__ov_tcga_pub | null | biodsa__ov_tcga_pub__task_9 | false | Easy | Research Question:
Among patients with high-grade serous ovarian cancer in the TCGA ovarian carcinoma cohort, is overall survival different between tumors with RB1 mutation and tumors without RB1 mutation?
Hypothesis:
H0: Overall survival is the same for patients with RB1-mutated tumors and patients with RB1 wild-type... | 0.175339 | fail_to_reject | tasks/log_rank_test/biodsa__ov_tcga_pub__task_9/dataset.csv | tasks/log_rank_test/biodsa__ov_tcga_pub__task_9/question.txt | tasks/log_rank_test/biodsa__ov_tcga_pub__task_9/answer_key.json | 315 | 4 | [
"sample_id",
"rb1_mutated",
"os_months",
"os_status"
] | 8,139 | 21bc621a46f16fb757c894b0e8db02f5f405be7b76332dd212c05e280320b2f4 |
log_rank_test/biodsa__pdac_msk_2024__task_5 | log_rank_test | biodsa__pdac_msk_2024__task_5 | biodsa | biodsa__pdac_msk_2024 | null | biodsa__pdac_msk_2024__task_5 | false | Easy | Research Question:
Is TP53 mutation status associated with differences in overall survival among patients in the MSK pancreatic adenocarcinoma cohort?
Hypothesis:
H0: Overall survival does not differ between patients with and without TP53 mutations
H1: Overall survival differs between patients with and without TP53 mu... | 0.000001 | reject | tasks/log_rank_test/biodsa__pdac_msk_2024__task_5/dataset.csv | tasks/log_rank_test/biodsa__pdac_msk_2024__task_5/question.txt | tasks/log_rank_test/biodsa__pdac_msk_2024__task_5/answer_key.json | 2,270 | 3 | [
"os_months",
"os_event",
"tp53_mutated"
] | 40,564 | 786d9e7bcd8e3c83941dd2a0dd39d9f49b963d35591e27772296e1b032f80b7c |
log_rank_test/biodsa__pdac_msk_2024__task_6 | log_rank_test | biodsa__pdac_msk_2024__task_6 | biodsa | biodsa__pdac_msk_2024 | null | biodsa__pdac_msk_2024__task_6 | false | Easy | Research Question:
Is overall survival different between KRAS-mutated and KRAS-wild-type cases in the MSK pancreatic adenocarcinoma cohort?
Hypothesis:
H0: Overall survival is the same for KRAS-mutated and KRAS-wild-type cases
H1: Overall survival differs between KRAS-mutated and KRAS-wild-type cases
STUDY DESIGN:
- ... | 0.001166 | reject | tasks/log_rank_test/biodsa__pdac_msk_2024__task_6/dataset.csv | tasks/log_rank_test/biodsa__pdac_msk_2024__task_6/question.txt | tasks/log_rank_test/biodsa__pdac_msk_2024__task_6/answer_key.json | 2,270 | 3 | [
"os_months",
"os_event",
"kras_mutated"
] | 40,564 | 2c95f4ac699b66de6e81988bcc0c5712a3f13b55c0c1af9e2681e8c8cee7d880 |
log_rank_test/biodsa__prad_pik3r1_msk_2021__task_4 | log_rank_test | biodsa__prad_pik3r1_msk_2021__task_4 | biodsa | biodsa__prad_pik3r1_msk_2021 | null | biodsa__prad_pik3r1_msk_2021__task_4 | false | Easy | Research Question:
Among patients in the MSK prostate adenocarcinoma cohort, is overall survival different between tumors with and without PIK3CA mutation?
Hypothesis:
H0: Overall survival is the same for patients with PIK3CA-mutated and PIK3CA-non-mutated tumors
H1: Overall survival differs between patients with PIK3... | 0.034402 | reject | tasks/log_rank_test/biodsa__prad_pik3r1_msk_2021__task_4/dataset.csv | tasks/log_rank_test/biodsa__prad_pik3r1_msk_2021__task_4/question.txt | tasks/log_rank_test/biodsa__prad_pik3r1_msk_2021__task_4/answer_key.json | 1,322 | 3 | [
"os_months",
"os_event",
"pik3ca_mutated"
] | 16,836 | 5994704fd4ac4afbd47e98dfbda6666ba9854d504d8704ba7c34cfbb8c3a5f51 |
log_rank_test/biodsa__prad_pik3r1_msk_2021__task_5 | log_rank_test | biodsa__prad_pik3r1_msk_2021__task_5 | biodsa | biodsa__prad_pik3r1_msk_2021 | null | biodsa__prad_pik3r1_msk_2021__task_5 | false | Easy | Research Question:
Among patients in the MSK prostate adenocarcinoma cohort, is overall survival different between tumors with and without a BRAF mutation?
Hypothesis:
H0: Overall survival does not differ between patients with BRAF-mutated tumors and patients with BRAF-wildtype tumors
H1: Overall survival differs betw... | 0.0182 | reject | tasks/log_rank_test/biodsa__prad_pik3r1_msk_2021__task_5/dataset.csv | tasks/log_rank_test/biodsa__prad_pik3r1_msk_2021__task_5/question.txt | tasks/log_rank_test/biodsa__prad_pik3r1_msk_2021__task_5/answer_key.json | 1,322 | 3 | [
"os_months",
"os_event",
"braf_mutated"
] | 16,834 | c2e83edaf8d80254750988244bc17599767cbc3308600f0088389880a9e2ab43 |
log_rank_test/biodsa__skcm_mskcc_2014__task_2 | log_rank_test | biodsa__skcm_mskcc_2014__task_2 | biodsa | biodsa__skcm_mskcc_2014 | null | biodsa__skcm_mskcc_2014__task_2 | false | Easy | Research Question:
Among patients in the MSK melanoma cohort (skcm_mskcc_2014), does overall survival differ between tumors with TP53 mutations and tumors without TP53 mutations?
Hypothesis:
H0: Overall survival is the same for patients with TP53-mutated tumors and patients with TP53-wild-type tumors.
H1: Overall surv... | 0.121264 | fail_to_reject | tasks/log_rank_test/biodsa__skcm_mskcc_2014__task_2/dataset.csv | tasks/log_rank_test/biodsa__skcm_mskcc_2014__task_2/question.txt | tasks/log_rank_test/biodsa__skcm_mskcc_2014__task_2/answer_key.json | 64 | 3 | [
"os_months",
"os_event",
"tp53_mutated"
] | 713 | 051bcf55a3030ea95f564512250edfb9959dc20130c7c8de0c425e81415a50d9 |
log_rank_test/biodsa__skcm_mskcc_2014__task_3 | log_rank_test | biodsa__skcm_mskcc_2014__task_3 | biodsa | biodsa__skcm_mskcc_2014 | null | biodsa__skcm_mskcc_2014__task_3 | false | Easy | Research Question:
Among patients in the MSK melanoma cohort (`skcm_mskcc_2014`), is overall survival different between those with and without a BRAF mutation?
Hypothesis:
H0: Overall survival is the same for patients with and without a BRAF mutation
H1: Overall survival differs between patients with and without a BRA... | 0.126152 | fail_to_reject | tasks/log_rank_test/biodsa__skcm_mskcc_2014__task_3/dataset.csv | tasks/log_rank_test/biodsa__skcm_mskcc_2014__task_3/question.txt | tasks/log_rank_test/biodsa__skcm_mskcc_2014__task_3/answer_key.json | 64 | 3 | [
"os_months",
"os_event",
"braf_mutated"
] | 713 | a750b5593df151dc03439afd589519800abc506b4e244f0502c95c5b72fa0d53 |
log_rank_test/biodsa__skcm_tcga__task_46 | log_rank_test | biodsa__skcm_tcga__task_46 | biodsa | biodsa__skcm_tcga | null | biodsa__skcm_tcga__task_46 | false | Easy | Research Question:
Is overall survival different between NF1-mutated and non-NF1-mutated cutaneous melanoma tumors in the TCGA SKCM cohort?
Hypothesis:
H0: Overall survival is the same between NF1-mutated and non-NF1-mutated cutaneous melanoma tumors
H1: Overall survival differs between NF1-mutated and non-NF1-mutated... | 0.122353 | fail_to_reject | tasks/log_rank_test/biodsa__skcm_tcga__task_46/dataset.csv | tasks/log_rank_test/biodsa__skcm_tcga__task_46/question.txt | tasks/log_rank_test/biodsa__skcm_tcga__task_46/answer_key.json | 362 | 4 | [
"sample_id",
"nf1_mutated",
"os_months",
"os_event"
] | 9,449 | 7dae16dd21635c3d95195a3a997bd2770288eb2d6f6c197351e1e9116b0e3f23 |
log_rank_test/biodsa__skcm_tcga__task_49 | log_rank_test | biodsa__skcm_tcga__task_49 | biodsa | biodsa__skcm_tcga | null | biodsa__skcm_tcga__task_49 | false | Easy | Research Question:
Is overall survival different between TripleWT subtype tumors and other tumors in cutaneous melanoma?
Hypothesis:
H0: Overall survival is the same for patients with TripleWT subtype tumors and patients with other tumors
H1: Overall survival differs between patients with TripleWT subtype tumors and p... | 0.025517 | reject | tasks/log_rank_test/biodsa__skcm_tcga__task_49/dataset.csv | tasks/log_rank_test/biodsa__skcm_tcga__task_49/question.txt | tasks/log_rank_test/biodsa__skcm_tcga__task_49/answer_key.json | 312 | 4 | [
"sample_id",
"is_triplewt_subtype",
"os_months",
"os_event"
] | 8,169 | 723439665ea8799df5f1fb06818634ef1613bf6c475b4d1cde5f00b8167ee590 |
log_rank_test/biodsa__stad_tcga_pub__task_63 | log_rank_test | biodsa__stad_tcga_pub__task_63 | biodsa | biodsa__stad_tcga_pub | null | biodsa__stad_tcga_pub__task_63 | false | Easy | Research Question:
Among stomach adenocarcinoma patients in the TCGA stomach adenocarcinoma study, is RB1 somatic mutation status associated with differences in overall survival?
Hypothesis:
H0: Overall survival does not differ between RB1-mutated and RB1-wildtype stomach adenocarcinoma patients.
H1: Overall survival ... | 0.160065 | fail_to_reject | tasks/log_rank_test/biodsa__stad_tcga_pub__task_63/dataset.csv | tasks/log_rank_test/biodsa__stad_tcga_pub__task_63/question.txt | tasks/log_rank_test/biodsa__stad_tcga_pub__task_63/answer_key.json | 268 | 5 | [
"sample_id",
"patient_id",
"OS_MONTHS",
"OS_EVENT",
"RB1_mutated"
] | 10,358 | 34f86599420252386439fbc8ae865982ae531b07ccc110ed2da3633504a21b26 |
log_rank_test/biodsa__stad_tcga_pub__task_64 | log_rank_test | biodsa__stad_tcga_pub__task_64 | biodsa | biodsa__stad_tcga_pub | null | biodsa__stad_tcga_pub__task_64 | false | Easy | Research Question:
Is BRAF mutation status associated with overall survival among patients with stomach adenocarcinoma in this sequencing cohort?
Hypothesis:
H0: Overall survival does not differ between BRAF-mutated and BRAF-wildtype patients.
H1: Overall survival differs between BRAF-mutated and BRAF-wildtype patient... | 0.123822 | fail_to_reject | tasks/log_rank_test/biodsa__stad_tcga_pub__task_64/dataset.csv | tasks/log_rank_test/biodsa__stad_tcga_pub__task_64/question.txt | tasks/log_rank_test/biodsa__stad_tcga_pub__task_64/answer_key.json | 268 | 5 | [
"sample_id",
"patient_id",
"OS_MONTHS",
"OS_EVENT",
"BRAF_mutated"
] | 10,359 | dc9ebaca7591f5fefa347d5effd989905ae75cc64ddb4b06b75a7fca0de1dbb0 |
log_rank_test/biodsa__stad_tcga_pub__task_66 | log_rank_test | biodsa__stad_tcga_pub__task_66 | biodsa | biodsa__stad_tcga_pub | null | biodsa__stad_tcga_pub__task_66 | false | Easy | Research Question:
Is BRAF mutation status associated with disease-free survival among stomach adenocarcinoma patients in the TCGA gastric adenocarcinoma cohort?
Hypothesis:
H0: Disease-free survival does not differ between BRAF-mutated and BRAF-wildtype stomach adenocarcinoma patients.
H1: Disease-free survival diffe... | 0.185056 | fail_to_reject | tasks/log_rank_test/biodsa__stad_tcga_pub__task_66/dataset.csv | tasks/log_rank_test/biodsa__stad_tcga_pub__task_66/question.txt | tasks/log_rank_test/biodsa__stad_tcga_pub__task_66/answer_key.json | 162 | 5 | [
"sample_id",
"patient_id",
"DFS_MONTHS",
"DFS_EVENT",
"BRAF_mutated"
] | 6,298 | 695346d4abe6acb6a18e9388a91a0fe24dad3ec536e14fb4037a078b345ab93c |
log_rank_test/biodsa__stad_tcga_pub__task_67 | log_rank_test | biodsa__stad_tcga_pub__task_67 | biodsa | biodsa__stad_tcga_pub | null | biodsa__stad_tcga_pub__task_67 | false | Easy | Research Question:
Is ATM mutation status associated with disease-free survival among stomach adenocarcinoma patients in the TCGA gastric adenocarcinoma cohort?
Hypothesis:
H0: Disease-free survival does not differ between ATM-mutated and ATM-wildtype stomach adenocarcinoma patients.
H1: Disease-free survival differs ... | 0.117527 | fail_to_reject | tasks/log_rank_test/biodsa__stad_tcga_pub__task_67/dataset.csv | tasks/log_rank_test/biodsa__stad_tcga_pub__task_67/question.txt | tasks/log_rank_test/biodsa__stad_tcga_pub__task_67/answer_key.json | 162 | 5 | [
"sample_id",
"patient_id",
"DFS_MONTHS",
"DFS_EVENT",
"ATM_mutated"
] | 6,297 | c52ccde94a5f285bb9577bf01c661e4ce7cf2d74fca905872f7b1bafae25670a |
logistic_regression/biodsa__msk_met_2021__task_232 | logistic_regression | biodsa__msk_met_2021__task_232 | biodsa | biodsa__msk_met_2021 | null | biodsa__msk_met_2021__task_232 | false | Hard | Research Question:
Among Non-Small Cell Lung Cancer primary tumor samples in the MSK MetTropism clinical sequencing cohort, is RB1 mutation status associated with metastatic disease status after accounting for patient sex and age at sequencing?
Hypothesis:
H0: RB1 mutation status is not associated with metastatic dise... | 0.052035 | fail_to_reject | tasks/logistic_regression/biodsa__msk_met_2021__task_232/dataset.csv | tasks/logistic_regression/biodsa__msk_met_2021__task_232/question.txt | tasks/logistic_regression/biodsa__msk_met_2021__task_232/answer_key.json | 2,894 | 10 | [
"sample_id",
"cancer_type",
"is_metastatic_patient",
"rb1_mutated",
"sex",
"sex_numeric",
"age_at_sequencing",
"fga",
"mutation_count",
"tmb_nonsynonymous"
] | 248,570 | 3264763ba64410578ae9cebc8e8ab92cc7e4557f547fa4e2d1ee0d9cefb5c682 |
logistic_regression/biodsa__msk_met_2021__task_234 | logistic_regression | biodsa__msk_met_2021__task_234 | biodsa | biodsa__msk_met_2021 | null | biodsa__msk_met_2021__task_234 | false | Hard | Research Question:
Is KRAS mutation status associated with metastatic disease among colorectal cancer patients after accounting for patient sex and age at sequencing?
Hypothesis:
H0: KRAS mutation status is not associated with metastatic disease among colorectal cancer patients after accounting for sex and age at sequ... | 0.118909 | fail_to_reject | tasks/logistic_regression/biodsa__msk_met_2021__task_234/dataset.csv | tasks/logistic_regression/biodsa__msk_met_2021__task_234/question.txt | tasks/logistic_regression/biodsa__msk_met_2021__task_234/answer_key.json | 2,396 | 10 | [
"sample_id",
"cancer_type",
"is_metastatic_patient",
"kras_mutated",
"sex",
"sex_numeric",
"age_at_sequencing",
"fga",
"mutation_count",
"tmb_nonsynonymous"
] | 184,001 | 080b54efe6cd794412b34b747c731be519bd7690f7daa3b0a945288eb936e1ad |
logistic_regression/biodsa__msk_met_2021__task_235 | logistic_regression | biodsa__msk_met_2021__task_235 | biodsa | biodsa__msk_met_2021 | null | biodsa__msk_met_2021__task_235 | false | Hard | Research Question:
Is PTEN mutation status associated with metastatic disease among colorectal cancer patients in this tumor sequencing cohort, accounting for basic patient demographics?
Hypothesis:
H0: PTEN mutation status is not associated with metastatic disease among colorectal cancer patients
H1: PTEN mutation st... | 0.014626 | reject | tasks/logistic_regression/biodsa__msk_met_2021__task_235/dataset.csv | tasks/logistic_regression/biodsa__msk_met_2021__task_235/question.txt | tasks/logistic_regression/biodsa__msk_met_2021__task_235/answer_key.json | 2,396 | 10 | [
"sample_id",
"cancer_type",
"is_metastatic_patient",
"pten_mutated",
"sex",
"sex_numeric",
"age_at_sequencing",
"fga",
"mutation_count",
"tmb_nonsynonymous"
] | 184,001 | 9d8ce56cfb8a92cf1409ac4194dffc463f40b35b360de7bb54a4f1877f5a42ec |
logistic_regression/biodsa__msk_met_2021__task_236 | logistic_regression | biodsa__msk_met_2021__task_236 | biodsa | biodsa__msk_met_2021 | null | biodsa__msk_met_2021__task_236 | false | Hard | Research Question:
Among primary tumor samples from prostate cancer patients, is TP53 mutation status associated with whether the patient has metastatic disease?
Hypothesis:
H0: TP53 mutation status is not associated with metastatic disease among prostate cancer patients
H1: TP53 mutation status is associated with met... | 0.019593 | reject | tasks/logistic_regression/biodsa__msk_met_2021__task_236/dataset.csv | tasks/logistic_regression/biodsa__msk_met_2021__task_236/question.txt | tasks/logistic_regression/biodsa__msk_met_2021__task_236/answer_key.json | 1,305 | 10 | [
"sample_id",
"cancer_type",
"is_metastatic_patient",
"tp53_mutated",
"sex",
"sex_numeric",
"age_at_sequencing",
"fga",
"mutation_count",
"tmb_nonsynonymous"
] | 94,596 | d21217d53d4125bd8a271379bf4e3a97702abba47f2e5f95326e846c555136d7 |
logistic_regression/biodsa__msk_met_2021__task_237 | logistic_regression | biodsa__msk_met_2021__task_237 | biodsa | biodsa__msk_met_2021 | null | biodsa__msk_met_2021__task_237 | false | Hard | Research Question:
Among Bladder Cancer patients with primary tumor samples in the MSK MetTropism cohort, is TP53 mutation status associated with metastatic disease status after accounting for patient sex and age at sequencing?
Hypothesis:
H0: TP53 mutation status is not associated with metastatic disease status after... | 0 | reject | tasks/logistic_regression/biodsa__msk_met_2021__task_237/dataset.csv | tasks/logistic_regression/biodsa__msk_met_2021__task_237/question.txt | tasks/logistic_regression/biodsa__msk_met_2021__task_237/answer_key.json | 904 | 10 | [
"sample_id",
"cancer_type",
"is_metastatic_patient",
"tp53_mutated",
"sex",
"sex_numeric",
"age_at_sequencing",
"fga",
"mutation_count",
"tmb_nonsynonymous"
] | 66,610 | 67bd48e69628155a90c08ae905b68254a81887d77a6be23be9fd10cb02a47abd |
logistic_regression/biodsa__nsclc_pd1_msk_2018__task_13 | logistic_regression | biodsa__nsclc_pd1_msk_2018__task_13 | biodsa | biodsa__nsclc_pd1_msk_2018 | null | biodsa__nsclc_pd1_msk_2018__task_13 | false | Hard | Research Question:
Among NSCLC patients treated with anti-PD-(L)1 therapy in the MSK cohort, is STK11 mutation status associated with durable clinical benefit after accounting for tumor mutation burden and smoking status?
Hypothesis:
H0: STK11 mutation status is not associated with durable clinical benefit after accou... | 0.071932 | fail_to_reject | tasks/logistic_regression/biodsa__nsclc_pd1_msk_2018__task_13/dataset.csv | tasks/logistic_regression/biodsa__nsclc_pd1_msk_2018__task_13/question.txt | tasks/logistic_regression/biodsa__nsclc_pd1_msk_2018__task_13/answer_key.json | 227 | 9 | [
"patient_id",
"sample_id",
"durable_clinical_benefit",
"dcb_binary",
"tmb_nonsynonymous",
"ever_smoker",
"stk11_mutated",
"sex",
"age"
] | 13,489 | ff3a6f91b4189a0cbcf7837686404492e2d35765769d62eda80f55aa609cf27e |
logistic_regression/biodsa__nsclc_pd1_msk_2018__task_14 | logistic_regression | biodsa__nsclc_pd1_msk_2018__task_14 | biodsa | biodsa__nsclc_pd1_msk_2018 | null | biodsa__nsclc_pd1_msk_2018__task_14 | false | Hard | Research Question:
Among patients with non-small-cell lung cancer treated with anti-PD-(L)1 therapy, is EGFR mutation status associated with durable clinical benefit after accounting for tumor mutation burden and smoking status?
Hypothesis:
H0: EGFR mutation status is not associated with durable clinical benefit after... | 0.0564 | fail_to_reject | tasks/logistic_regression/biodsa__nsclc_pd1_msk_2018__task_14/dataset.csv | tasks/logistic_regression/biodsa__nsclc_pd1_msk_2018__task_14/question.txt | tasks/logistic_regression/biodsa__nsclc_pd1_msk_2018__task_14/answer_key.json | 227 | 9 | [
"patient_id",
"sample_id",
"durable_clinical_benefit",
"dcb_binary",
"tmb_nonsynonymous",
"ever_smoker",
"egfr_mutated",
"sex",
"age"
] | 13,488 | 32b9069e0ca9e06960dc5893efdcb7965f653002a169c473601296af94d999a1 |
logistic_regression/dfeep__paper_109__task_4 | logistic_regression | dfeep__paper_109__task_4 | dfeep | dfeep__paper_109 | null | dfeep__paper_109__task_4 | false | Hard | Research Question:
Do SMS reminders affect antimalarial treatment adherence among adult patients in the randomized trial in northern Ghana?
Hypothesis:
H0: SMS reminders have no effect on adherence among adult patients.
H1: SMS reminders affect adherence among adult patients.
STUDY DESIGN:
- Type: Randomized controll... | 0.151 | fail_to_reject | tasks/logistic_regression/dfeep__paper_109__task_4/dataset.csv | tasks/logistic_regression/dfeep__paper_109__task_4/question.txt | tasks/logistic_regression/dfeep__paper_109__task_4/answer_key.json | 740 | 48 | [
"treated_ate",
"p1a_vendcode",
"wealth_quintile",
"adhered_SR",
"drug",
"drugdum1",
"drugdum2",
"drugdum3",
"drugdum4",
"male",
"maledum1",
"maledum2",
"maledum3",
"age_group",
"chad",
"chaddum1",
"chaddum2",
"chaddum3",
"inter",
"inter2",
"inter3",
"inter4",
"male_head",... | 100,274 | 2b15d48ccd1d4a9192d127c5444d796a7781b10fbb01b671a3da24c2bd746c4f |
logistic_regression/dfeep__paper_109__task_6 | logistic_regression | dfeep__paper_109__task_6 | dfeep | dfeep__paper_109 | null | dfeep__paper_109__task_6 | false | Hard | Research Question:
Among individual patients in the Northern Ghana antimalarial treatment trial, is self-reported adherence to the full dosage associated with a lower likelihood of still being sick at follow-up?
Hypothesis:
H0: Self-reported adherence is not associated with still being sick at follow-up
H1: Self-repor... | 0.004 | reject | tasks/logistic_regression/dfeep__paper_109__task_6/dataset.csv | tasks/logistic_regression/dfeep__paper_109__task_6/question.txt | tasks/logistic_regression/dfeep__paper_109__task_6/answer_key.json | 3,317 | 49 | [
"treated_ate",
"p1a_vendcode",
"wealth_quintile",
"adhered_SR",
"still_sick",
"drug",
"drugdum1",
"drugdum2",
"drugdum3",
"drugdum4",
"male",
"maledum1",
"maledum2",
"maledum3",
"age_group",
"chad",
"chaddum1",
"chaddum2",
"chaddum3",
"inter",
"inter2",
"inter3",
"inter4"... | 364,138 | 3e762b4e2f62b370f4d44c97a684f43c5c780ae6d411154fba019afc0a316820 |
logistic_regression/dfeep__paper_109__task_7 | logistic_regression | dfeep__paper_109__task_7 | dfeep | dfeep__paper_109 | null | dfeep__paper_109__task_7 | false | Hard | Research Question:
Among individual malaria patients in the randomized trial, does assignment to long SMS reminders change the probability that a patient is still sick at follow-up?
Hypothesis:
H0: Assignment to long SMS reminders does not change the probability that a patient is still sick at follow-up.
H1: Assignmen... | 0.043 | reject | tasks/logistic_regression/dfeep__paper_109__task_7/dataset.csv | tasks/logistic_regression/dfeep__paper_109__task_7/question.txt | tasks/logistic_regression/dfeep__paper_109__task_7/answer_key.json | 3,317 | 49 | [
"treated_ate",
"p1a_vendcode",
"wealth_quintile",
"adhered_SR",
"still_sick",
"drug",
"drugdum1",
"drugdum2",
"drugdum3",
"drugdum4",
"male",
"maledum1",
"maledum2",
"maledum3",
"age_group",
"chad",
"chaddum1",
"chaddum2",
"chaddum3",
"inter",
"inter2",
"inter3",
"inter4"... | 364,138 | 3e762b4e2f62b370f4d44c97a684f43c5c780ae6d411154fba019afc0a316820 |
logistic_regression/dfeep__paper_117__task_2 | logistic_regression | dfeep__paper_117__task_2 | dfeep | dfeep__paper_117 | null | dfeep__paper_117__task_2 | false | Hard | Research Question:
Does household poverty predict whether households in Mexico City reduced food consumption during the COVID-19 pandemic?
Hypothesis:
H0: Household poverty is not associated with the likelihood of reducing food consumption during the pandemic.
H1: Household poverty is associated with the likelihood of... | 0 | reject | tasks/logistic_regression/dfeep__paper_117__task_2/dataset.csv | tasks/logistic_regression/dfeep__paper_117__task_2/question.txt | tasks/logistic_regression/dfeep__paper_117__task_2/answer_key.json | 1,322 | 7 | [
"caseid",
"female",
"fsec_reduced",
"PPI",
"age",
"educ_secondary",
"educ_tertiary"
] | 44,563 | 87c59e363e7aad408ba13f9fb033fff28f1cf358e3010b8c3d88ce6bc0168096 |
logistic_regression/dfeep__paper_117__task_4 | logistic_regression | dfeep__paper_117__task_4 | dfeep | dfeep__paper_117 | null | dfeep__paper_117__task_4 | false | Hard | Research Question:
Did workplace closure or reduced workplace activity during the COVID-19 pandemic correspond to a higher likelihood of earnings declines among surveyed workers in Mexico City?
Hypothesis:
H0: Workplace closure or reduced workplace activity is not associated with whether a respondent's earnings decrea... | 0 | reject | tasks/logistic_regression/dfeep__paper_117__task_4/dataset.csv | tasks/logistic_regression/dfeep__paper_117__task_4/question.txt | tasks/logistic_regression/dfeep__paper_117__task_4/answer_key.json | 886 | 7 | [
"caseid",
"female",
"inc_op_less",
"age",
"educ_secondary",
"educ_tertiary",
"earnings_decreased"
] | 16,572 | 7996804d25cca4f2829d802f7f6eaadd44b06934eac25ff41a4cd0801f51255b |
logistic_regression/dfeep__paper_117__task_5 | logistic_regression | dfeep__paper_117__task_5 | dfeep | dfeep__paper_117 | null | dfeep__paper_117__task_5 | false | Hard | Research Question:
Is there a gender difference in whether respondents in Mexico City reported that insecurity increased during the COVID-19 pandemic?
Hypothesis:
H0: Gender is not associated with the probability of reporting increased insecurity during the COVID-19 pandemic.
H1: Gender is associated with the probabil... | 0.006 | reject | tasks/logistic_regression/dfeep__paper_117__task_5/dataset.csv | tasks/logistic_regression/dfeep__paper_117__task_5/question.txt | tasks/logistic_regression/dfeep__paper_117__task_5/answer_key.json | 1,283 | 7 | [
"caseid",
"dem9",
"female",
"pol1_inc",
"age",
"educ_secondary",
"educ_tertiary"
] | 23,990 | 8afebf9f2206dcc5c8117d8c44a3c3e5e918a46c8132af40f25f9b6bbb11e898 |
logistic_regression/dfeep__paper_133__task_5 | logistic_regression | dfeep__paper_133__task_5 | dfeep | dfeep__paper_133 | null | dfeep__paper_133__task_5 | false | Hard | Research Question:
Does offering a selection incentive change the log-odds that the referrer and referred borrower have a work relationship rather than a family relationship?
Hypothesis:
H0: In the Work-versus-Relative multinomial-logit contrast, the selection-incentive coefficient is zero.
H1: In the Work-versus-Rela... | 0.052 | fail_to_reject | tasks/logistic_regression/dfeep__paper_133__task_5/dataset.csv | tasks/logistic_regression/dfeep__paper_133__task_5/question.txt | tasks/logistic_regression/dfeep__paper_133__task_5/answer_key.json | 426 | 3 | [
"treatment",
"relationship",
"incentive"
] | 9,012 | 116db82a96ff744488f00cb9a35fd357ecf5881e2e30b2f3c78387a7a7d43537 |
logistic_regression/dfeep__paper_159__task_2 | logistic_regression | dfeep__paper_159__task_2 | dfeep | dfeep__paper_159 | null | dfeep__paper_159__task_2 | false | Hard | Research Question:
Does assignment to the Commitment Contract arm increase the likelihood of biochemically verified smoking abstinence at 2 months among participants in a community health center smoking cessation program?
Hypothesis:
H0: Assignment to the Commitment Contract arm is not associated with 2-month biochemi... | 0.083 | fail_to_reject | tasks/logistic_regression/dfeep__paper_159__task_2/dataset.csv | tasks/logistic_regression/dfeep__paper_159__task_2/question.txt | tasks/logistic_regression/dfeep__paper_159__task_2/answer_key.json | 263 | 13 | [
"treatment",
"any_treat",
"a_age",
"urine_2m_pass",
"female",
"hh_income_0to10",
"hh_income_10to30",
"hh_income_30to50",
"educ_high",
"educ_college",
"treat1",
"treat2",
"treat3"
] | 10,522 | fd2e2748bc34928369d2ca55d2772985c7af2de1d82f79d70d4e6d642e0707a2 |
logistic_regression/dfeep__paper_159__task_3 | logistic_regression | dfeep__paper_159__task_3 | dfeep | dfeep__paper_159 | null | dfeep__paper_159__task_3 | false | Hard | Research Question:
Does assignment to any financial incentive treatment arm, relative to control, increase the likelihood of biochemically verified smoking abstinence at 2 months?
Hypothesis:
H0: Assignment to any financial incentive treatment arm is not associated with 2-month biochemically verified smoking abstinenc... | 0.25543 | fail_to_reject | tasks/logistic_regression/dfeep__paper_159__task_3/dataset.csv | tasks/logistic_regression/dfeep__paper_159__task_3/question.txt | tasks/logistic_regression/dfeep__paper_159__task_3/answer_key.json | 311 | 6 | [
"treatment",
"any_treat",
"urine_2m_pass",
"treat1",
"treat2",
"treat3"
] | 7,660 | daf41c5f7e7d717892b71bb57b3f6f66a252989a9b93cf32a2c0022cbcc70d42 |
logistic_regression/dfeep__paper_169__task_1 | logistic_regression | dfeep__paper_169__task_1 | dfeep | dfeep__paper_169 | null | dfeep__paper_169__task_1 | false | Hard | Research Question:
Did female workers in Cote d'Ivoire have a different likelihood of reporting an earnings decrease during the COVID-19 period than male workers among those who were working in February 2020 and still working at the time of the survey?
Hypothesis:
H0: Female workers and male workers have the same like... | 0.907 | fail_to_reject | tasks/logistic_regression/dfeep__paper_169__task_1/dataset.csv | tasks/logistic_regression/dfeep__paper_169__task_1/question.txt | tasks/logistic_regression/dfeep__paper_169__task_1/answer_key.json | 277 | 8 | [
"age",
"hh_size",
"inc_d_earn",
"PPI",
"female",
"capital",
"educ_secondary",
"educ_tertiary"
] | 8,996 | 931b47e2f0aca767df4258ff59ee6d7e5a8ac8b1407d1ab4d4135f9c04552f26 |
logistic_regression/dfeep__paper_172__task_3 | logistic_regression | dfeep__paper_172__task_3 | dfeep | dfeep__paper_172 | null | dfeep__paper_172__task_3 | false | Hard | Research Question:
Are digital financial services users in Enugu more likely than users in Kaduna to report experiencing unexpected or unclear fees in the Nigeria survey sample?
Hypothesis:
H0: The incidence of unexpected or unclear fees is the same for respondents in Enugu and Kaduna.
H1: The incidence of unexpected ... | 0.001 | reject | tasks/logistic_regression/dfeep__paper_172__task_3/dataset.csv | tasks/logistic_regression/dfeep__paper_172__task_3/question.txt | tasks/logistic_regression/dfeep__paper_172__task_3/answer_key.json | 752 | 5 | [
"State",
"age",
"filter_unexpfees",
"is_male",
"educ_tertiary"
] | 11,534 | 72261f14290a3c3c1cf82d564b4f4e64bee3455ae3bc858860ece440b3875a9c |
logistic_regression/dfeep__paper_172__task_4 | logistic_regression | dfeep__paper_172__task_4 | dfeep | dfeep__paper_172 | null | dfeep__paper_172__task_4 | false | Hard | Research Question:
Among digital financial services users in Nigeria who have used an agent, do respondents in Lagos report higher trust in agent integrity than respondents in Kaduna?
Hypothesis:
H0: Trust in agent integrity is the same for DFS agent users in Lagos and Kaduna.
H1: Trust in agent integrity differs for ... | 0.000272 | reject | tasks/logistic_regression/dfeep__paper_172__task_4/dataset.csv | tasks/logistic_regression/dfeep__paper_172__task_4/question.txt | tasks/logistic_regression/dfeep__paper_172__task_4/answer_key.json | 599 | 6 | [
"State",
"age",
"filter_agent",
"is_male",
"educ_tertiary",
"trust_integrity"
] | 11,556 | c2d97c7e67495ea8c7d08af2abca5cc15b217d25459758f1eb4ba8211c43184f |
logistic_regression/dfeep__paper_172__task_6 | logistic_regression | dfeep__paper_172__task_6 | dfeep | dfeep__paper_172 | null | dfeep__paper_172__task_6 | false | Hard | Research Question:
Are DFS users in Lagos less likely than DFS users in Kaduna to report being charged extra fees by agents?
Hypothesis:
H0: The likelihood of reporting agent overcharging is the same for DFS users in Lagos and Kaduna.
H1: The likelihood of reporting agent overcharging differs for DFS users in Lagos ve... | 0 | reject | tasks/logistic_regression/dfeep__paper_172__task_6/dataset.csv | tasks/logistic_regression/dfeep__paper_172__task_6/question.txt | tasks/logistic_regression/dfeep__paper_172__task_6/answer_key.json | 606 | 6 | [
"age",
"is_male",
"educ_tertiary",
"state_enugu",
"state_lagos",
"agent_extfee_any"
] | 7,945 | 61ef5124500e5df247cc0c1f83a10bb0d326f97a75ff8860e939fbf18dede038 |
logistic_regression/dfeep__paper_36__task_1 | logistic_regression | dfeep__paper_36__task_1 | dfeep | dfeep__paper_36 | null | dfeep__paper_36__task_1 | false | Hard | Research Question:
Among households in Indonesian villages assigned to self-targeting registration for social assistance, does the observable component of household consumption predict whether a household shows up to register, with richer households less likely to appear?
Hypothesis:
H0: The observable component of ho... | 0 | reject | tasks/logistic_regression/dfeep__paper_36__task_1/dataset.csv | tasks/logistic_regression/dfeep__paper_36__task_1/question.txt | tasks/logistic_regression/dfeep__paper_36__task_1/answer_key.json | 2,000 | 7 | [
"hhea",
"logconsumption",
"PMTSCORE",
"pcexppred",
"showup",
"povertyline3",
"epsilon"
] | 112,486 | a2524f46c6f8fa115850de0a61fabe40ec02fe742b1dedd25769e2f26e2fa0c7 |
logistic_regression/dfeep__paper_54__task_3 | logistic_regression | dfeep__paper_54__task_3 | dfeep | dfeep__paper_54 | null | dfeep__paper_54__task_3 | false | Hard | Research Question:
Does exposure to physician-delivered COVID-19 video messages reduce the probability that Black and Latinx adults in the United States have any knowledge gap about COVID-19?
Hypothesis:
H0: Exposure to physician-delivered COVID-19 video messages does not change the probability of having any COVID-19 ... | 0 | reject | tasks/logistic_regression/dfeep__paper_54__task_3/dataset.csv | tasks/logistic_regression/dfeep__paper_54__task_3/question.txt | tasks/logistic_regression/dfeep__paper_54__task_3/answer_key.json | 14,144 | 25 | [
"anytreat",
"race_concord",
"birx",
"elephant1",
"elephant2",
"debiasing",
"knowledge_count_variable",
"intended_behavior",
"want_mask_vid",
"want_any_link",
"any_knowledge_gap",
"posterior_protect",
"posterior_no_good",
"posterior_was_sick",
"masks_for_the_people",
"stratum",
"resp_... | 1,151,773 | b9881be00d7a6f37cac5c1c547f8249ca1871315f34fbe89f82528fbbacba109 |
logistic_regression/dfeep__paper_63__task_2 | logistic_regression | dfeep__paper_63__task_2 | dfeep | dfeep__paper_63 | null | dfeep__paper_63__task_2 | false | Hard | Research Question:
Is household poverty status associated with healthcare avoidance during COVID-19 among respondents in the RECOVR Zambia Round 1 survey?
Hypothesis:
H0: Poverty status is not associated with healthcare avoidance during COVID-19 among surveyed respondents.
H1: Poverty status is associated with healthc... | 0.661 | fail_to_reject | tasks/logistic_regression/dfeep__paper_63__task_2/dataset.csv | tasks/logistic_regression/dfeep__paper_63__task_2/question.txt | tasks/logistic_regression/dfeep__paper_63__task_2/answer_key.json | 1,236 | 7 | [
"caseid",
"age",
"hh_size",
"ppi",
"female",
"educ_level",
"healthcare_avoid"
] | 43,640 | 4caa9ab5174d4cc963f23d527ba2a5e764db79cdb202a2b41ddcf7c41642e9dc |
logistic_regression/dfeep__paper_63__task_5 | logistic_regression | dfeep__paper_63__task_5 | dfeep | dfeep__paper_63 | null | dfeep__paper_63__task_5 | false | Hard | Research Question:
Does education level relate to whether previously employed respondents in the RECOVR Zambia Round 1 survey worked at least one hour in the past 7 days during COVID-19?
Hypothesis:
H0: Education level is not associated with whether a respondent worked in the past 7 days during COVID-19.
H1: Education... | 0.199 | fail_to_reject | tasks/logistic_regression/dfeep__paper_63__task_5/dataset.csv | tasks/logistic_regression/dfeep__paper_63__task_5/question.txt | tasks/logistic_regression/dfeep__paper_63__task_5/answer_key.json | 736 | 7 | [
"caseid",
"age",
"hh_size",
"ppi",
"female",
"educ_level",
"worked_7d"
] | 26,005 | 4affdd915f6ed89c85f3cdd39e02b7ddb27117e204c55653a75a49f1ca497ffa |
logistic_regression/dfeep__paper_63__task_6 | logistic_regression | dfeep__paper_63__task_6 | dfeep | dfeep__paper_63 | null | dfeep__paper_63__task_6 | false | Hard | Research Question:
Does household size predict whether a respondent reports extreme difficulty raising K800 for an emergency during the COVID-19 period in the Zambia RECOVR survey?
Hypothesis:
H0: Household size is not associated with reporting extreme difficulty raising K800 for an emergency.
H1: Household size is as... | 0.688 | fail_to_reject | tasks/logistic_regression/dfeep__paper_63__task_6/dataset.csv | tasks/logistic_regression/dfeep__paper_63__task_6/question.txt | tasks/logistic_regression/dfeep__paper_63__task_6/answer_key.json | 933 | 7 | [
"caseid",
"age",
"hh_size",
"ppi",
"female",
"educ_level",
"emerg_very_diff"
] | 32,960 | 4d0374f8af33eae9e4783a94f2f37d6c2dfa67528f57ea11c36f25c5c3c87aaa |
logistic_regression/dfeep__paper_78__task_1 | logistic_regression | dfeep__paper_78__task_1 | dfeep | dfeep__paper_78 | null | dfeep__paper_78__task_1 | false | Hard | Research Question:
Among digital financial service users in Kenya, is reported exposure to COVID-related fraud or scam attempts different for men and women?
Hypothesis:
H0: Reported exposure to COVID-related fraud or scam attempts is the same for men and women among digital financial service users in Kenya.
H1: Report... | 0.605 | fail_to_reject | tasks/logistic_regression/dfeep__paper_78__task_1/dataset.csv | tasks/logistic_regression/dfeep__paper_78__task_1/question.txt | tasks/logistic_regression/dfeep__paper_78__task_1/answer_key.json | 792 | 2 | [
"fraud_covid",
"is_male"
] | 3,188 | c26ebdd854a160f1868b599c72d2a9b501585b0f416937b17832e1001ee9ef9f |
logistic_regression/dfeep__paper_78__task_7 | logistic_regression | dfeep__paper_78__task_7 | dfeep | dfeep__paper_78 | null | dfeep__paper_78__task_7 | false | Hard | Research Question:
Are mobile loan users more likely than non-users to report exposure to COVID-related fraud or scam attempts among digital financial service users in Kenya?
Hypothesis:
H0: Mobile loan users and non-users are equally likely to report COVID-related fraud or scam exposure.
H1: Mobile loan users and non... | 0.026 | reject | tasks/logistic_regression/dfeep__paper_78__task_7/dataset.csv | tasks/logistic_regression/dfeep__paper_78__task_7/question.txt | tasks/logistic_regression/dfeep__paper_78__task_7/answer_key.json | 543 | 6 | [
"ppiscore",
"fraud_covid",
"is_male",
"young",
"is_urban",
"ml_user"
] | 7,111 | 3158a05e8474a49781f540e30bbe9aa2099790d6062b4c89cfbc2bac212aafe1 |
logistic_regression/hbiostat__acath__task_2 | logistic_regression | hbiostat__acath__task_2 | hbiostat | hbiostat__acath | null | hbiostat__acath__task_2 | false | Hard | Research Question:
Is patient age associated with three-vessel or left main coronary disease among patients undergoing cardiac catheterization?
Hypothesis:
H0: Patient age is not associated with the presence of three-vessel or left main coronary disease.
H1: Patient age is associated with the presence of three-vessel ... | 0.0025 | reject | tasks/logistic_regression/hbiostat__acath__task_2/dataset.csv | tasks/logistic_regression/hbiostat__acath__task_2/question.txt | tasks/logistic_regression/hbiostat__acath__task_2/answer_key.json | 3,504 | 6 | [
"sex",
"age",
"cad.dur",
"choleste",
"sigdz",
"tvdlm"
] | 54,001 | fb4a0acf706056e6c97c27ec8e683381e7141d77737649828d2f9e9902d54688 |
logistic_regression/hbiostat__stressEcho__task_1 | logistic_regression | hbiostat__stressEcho__task_1 | hbiostat | hbiostat__stressEcho | null | hbiostat__stressEcho__task_1 | false | Hard | Research Question:
Among patients undergoing dobutamine stress echocardiography, is smoking history associated with the occurrence of any major cardiac event, accounting for the broader clinical and stress echocardiography context captured in the dataset?
Hypothesis:
H0: Smoking history is not associated with the occu... | 0.5119 | fail_to_reject | tasks/logistic_regression/hbiostat__stressEcho__task_1/dataset.csv | tasks/logistic_regression/hbiostat__stressEcho__task_1/question.txt | tasks/logistic_regression/hbiostat__stressEcho__task_1/answer_key.json | 558 | 31 | [
"bhr",
"basebp",
"basedp",
"pkhr",
"sbp",
"dp",
"dose",
"maxhr",
"pctMphr",
"mbp",
"dpmaxdo",
"dobdose",
"age",
"gender",
"baseEF",
"dobEF",
"chestpain",
"restwma",
"posSE",
"newMI",
"newPTCA",
"newCABG",
"death",
"hxofHT",
"hxofDM",
"hxofCig",
"hxofMI",
"hxofPT... | 63,407 | 819e6b537a6cc2e4d460bd5b84f41b621bd2d4c994ad08021a5ad337cfbe2870 |
logistic_regression/hbiostat__support__task_1 | logistic_regression | hbiostat__support__task_1 | hbiostat | hbiostat__support | null | hbiostat__support__task_1 | false | Hard | Research Question:
Among seriously ill hospitalized adults in the SUPPORT study, is in-hospital mortality associated with patient disease class, particularly the Coma category, and how do the listed patient characteristics relate to that outcome?
Hypothesis:
H0: Patients in the Coma disease class do not differ in in-h... | 0 | reject | tasks/logistic_regression/hbiostat__support__task_1/dataset.csv | tasks/logistic_regression/hbiostat__support__task_1/question.txt | tasks/logistic_regression/hbiostat__support__task_1/answer_key.json | 9,105 | 47 | [
"age",
"death",
"sex",
"hospdead",
"slos",
"d.time",
"dzgroup",
"dzclass",
"num.co",
"edu",
"income",
"scoma",
"charges",
"totcst",
"totmcst",
"avtisst",
"race",
"sps",
"aps",
"surv2m",
"surv6m",
"hday",
"diabetes",
"dementia",
"ca",
"prg2m",
"prg6m",
"dnr",
"... | 2,705,413 | c3839c45dd5c1589a3b87ac556346318798f5f7c208b20aa45e5da3fe1b6a311 |
logistic_regression/hbiostat__titanic3__task_1 | logistic_regression | hbiostat__titanic3__task_1 | hbiostat | hbiostat__titanic3 | null | hbiostat__titanic3__task_1 | false | Hard | Research Question:
Among Titanic passengers, is survival associated with passenger sex, considering demographic and family-accompaniment characteristics?
Hypothesis:
H0: Passenger sex is not associated with survival on the Titanic.
H1: Passenger sex is associated with survival on the Titanic.
STUDY DESIGN:
- Type: Ob... | 0 | reject | tasks/logistic_regression/hbiostat__titanic3__task_1/dataset.csv | tasks/logistic_regression/hbiostat__titanic3__task_1/question.txt | tasks/logistic_regression/hbiostat__titanic3__task_1/answer_key.json | 1,309 | 14 | [
"pclass",
"survived",
"name",
"sex",
"age",
"sibsp",
"parch",
"ticket",
"fare",
"cabin",
"embarked",
"boat",
"body",
"home.dest"
] | 139,174 | deccacb51e740c079c7f6b7cc35b41db0aecd1d3b35334c019fadb402b5178e1 |
logistic_regression/hbiostat__vlbw__task_1 | logistic_regression | hbiostat__vlbw__task_1 | hbiostat | hbiostat__vlbw | null | hbiostat__vlbw__task_1 | false | Hard | Research Question:
Among very low birth weight infants, is pneumothorax associated with in-hospital death?
Hypothesis:
H0: Pneumothorax is not associated with in-hospital death among very low birth weight infants.
H1: Pneumothorax is associated with in-hospital death among very low birth weight infants.
STUDY DESIGN:... | 0 | reject | tasks/logistic_regression/hbiostat__vlbw__task_1/dataset.csv | tasks/logistic_regression/hbiostat__vlbw__task_1/question.txt | tasks/logistic_regression/hbiostat__vlbw__task_1/answer_key.json | 671 | 26 | [
"birth",
"exit",
"hospstay",
"lowph",
"pltct",
"race",
"bwt",
"gest",
"inout",
"twn",
"lol",
"magsulf",
"meth",
"toc",
"delivery",
"apg1",
"vent",
"pneumo",
"pda",
"cld",
"pvh",
"ivh",
"ipe",
"year",
"sex",
"dead"
] | 97,659 | 63e6c3dc78ffb5939b537e134c00b89f10b2d3155bc210fe0ca38b4989d1d7f2 |
logistic_regression/medical_bio__birthweight__task_1 | logistic_regression | medical_bio__birthweight__task_1 | medical_bio | medical_bio__birthweight | null | medical_bio__birthweight__task_1 | false | Hard | Research Question:
Among women delivering at Baystate Medical Center, is maternal smoking associated with low birth weight, defined as birth weight below 2500 grams?
Hypothesis:
H0: Maternal smoking is not associated with low birth weight among women delivering at Baystate Medical Center.
H1: Maternal smoking is assoc... | 0.0044 | reject | tasks/logistic_regression/medical_bio__birthweight__task_1/dataset.csv | tasks/logistic_regression/medical_bio__birthweight__task_1/question.txt | tasks/logistic_regression/medical_bio__birthweight__task_1/answer_key.json | 189 | 10 | [
"low",
"age",
"lwt",
"race",
"smoke",
"ptl",
"ht",
"ui",
"ftv",
"bwt"
] | 4,955 | 50102db24a1fc05d351f83b341d71fa6b5847493bbb1a709811f9910a38f62ca |
logistic_regression/medical_bio__birthweight__task_2 | logistic_regression | medical_bio__birthweight__task_2 | medical_bio | medical_bio__birthweight | null | medical_bio__birthweight__task_2 | false | Hard | Research Question:
Is maternal smoking during pregnancy associated with a higher likelihood of low birth weight among women in this birthweight dataset, accounting for key maternal characteristics?
Hypothesis:
H0: Maternal smoking during pregnancy is not associated with a higher likelihood of low birth weight
H1: Mate... | 0.005 | reject | tasks/logistic_regression/medical_bio__birthweight__task_2/dataset.csv | tasks/logistic_regression/medical_bio__birthweight__task_2/question.txt | tasks/logistic_regression/medical_bio__birthweight__task_2/answer_key.json | 189 | 10 | [
"low",
"age",
"lwt",
"race",
"smoke",
"ptl",
"ht",
"ui",
"ftv",
"bwt"
] | 4,955 | 50102db24a1fc05d351f83b341d71fa6b5847493bbb1a709811f9910a38f62ca |
logistic_regression/medical_bio__pima_diabetes__task_1 | logistic_regression | medical_bio__pima_diabetes__task_1 | medical_bio | medical_bio__pima_diabetes | null | medical_bio__pima_diabetes__task_1 | false | Hard | Research Question:
Is plasma glucose level associated with diabetes status among Pima Indian women, using the available clinical measurements in this study sample?
Hypothesis:
H0: Plasma glucose level is not associated with diabetes status among Pima Indian women.
H1: Plasma glucose level is associated with diabetes s... | 0.0169 | reject | tasks/logistic_regression/medical_bio__pima_diabetes__task_1/dataset.csv | tasks/logistic_regression/medical_bio__pima_diabetes__task_1/question.txt | tasks/logistic_regression/medical_bio__pima_diabetes__task_1/answer_key.json | 532 | 8 | [
"npreg",
"glu",
"bp",
"skin",
"bmi",
"ped",
"age",
"type"
] | 16,455 | b3fe351e52c3ee8cb5927c1a04ff13b53d71e944acb9a0065d1c2b661234a4d5 |
mann_whitney_test/biodsa__blca_tcga_pub_2017__task_83 | mann_whitney_test | biodsa__blca_tcga_pub_2017__task_83 | biodsa | biodsa__blca_tcga_pub_2017 | null | biodsa__blca_tcga_pub_2017__task_83 | false | Easy | Research Question:
Among bladder cancer samples in the TCGA Cell 2017 cohort, does Tumor Mutational Burden (nonsynonymous) differ between male and female patients?
Hypothesis:
H0: The distribution of Tumor Mutational Burden (nonsynonymous) is the same in male and female patients
H1: The distribution of Tumor Mutationa... | 0.015483 | reject | tasks/mann_whitney_test/biodsa__blca_tcga_pub_2017__task_83/dataset.csv | tasks/mann_whitney_test/biodsa__blca_tcga_pub_2017__task_83/question.txt | tasks/mann_whitney_test/biodsa__blca_tcga_pub_2017__task_83/answer_key.json | 411 | 4 | [
"sample_id",
"patient_id",
"tmb_nonsynonymous",
"sex_group"
] | 17,998 | 47e4437cb25138082ab7e7ef39a6ef1628b152aaacc894ea3af4d9dfedf6d45f |
mann_whitney_test/biodsa__brca_tcga_pub2015__task_67 | mann_whitney_test | biodsa__brca_tcga_pub2015__task_67 | biodsa | biodsa__brca_tcga_pub2015 | null | biodsa__brca_tcga_pub2015__task_67 | false | Easy | Research Question:
Among breast invasive carcinoma samples in the TCGA Cell 2015 cohort, does Fraction Genome Altered differ between samples with PTEN mutation and samples with wild-type PTEN?
Hypothesis:
H0: The distribution of Fraction Genome Altered is the same in PTEN-mutated and PTEN wild-type samples.
H1: The di... | 0.112961 | fail_to_reject | tasks/mann_whitney_test/biodsa__brca_tcga_pub2015__task_67/dataset.csv | tasks/mann_whitney_test/biodsa__brca_tcga_pub2015__task_67/question.txt | tasks/mann_whitney_test/biodsa__brca_tcga_pub2015__task_67/answer_key.json | 817 | 4 | [
"sample_id",
"patient_id",
"fraction_genome_altered",
"pten_status"
] | 37,438 | 8717c3d1e34e157326bce2a887053d0202d74daf02dfd2fd881bb5774932479b |
mann_whitney_test/biodsa__brca_tcga_pub2015__task_73 | mann_whitney_test | biodsa__brca_tcga_pub2015__task_73 | biodsa | biodsa__brca_tcga_pub2015 | null | biodsa__brca_tcga_pub2015__task_73 | false | Easy | Research Question:
Is diagnosis age different between breast invasive carcinoma samples with TP53 mutations and those with wild-type TP53 in the TCGA breast cancer cohort?
Hypothesis:
H0: The distribution of diagnosis age is the same in TP53-mutated and TP53 wild-type samples
H1: The distribution of diagnosis age diff... | 0.003895 | reject | tasks/mann_whitney_test/biodsa__brca_tcga_pub2015__task_73/dataset.csv | tasks/mann_whitney_test/biodsa__brca_tcga_pub2015__task_73/question.txt | tasks/mann_whitney_test/biodsa__brca_tcga_pub2015__task_73/answer_key.json | 817 | 4 | [
"sample_id",
"patient_id",
"age",
"tp53_status"
] | 35,425 | 02ad654d22af42bacb7a56dce6720b267f86c90b9cb86bf16c654f0218366cd4 |
mann_whitney_test/biodsa__breast_msk_2018__task_106 | mann_whitney_test | biodsa__breast_msk_2018__task_106 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_106 | false | Easy | Research Question:
Among breast cancer samples in the MSK 2018 cohort, does disease-free survival differ between samples with PTEN mutations and samples without PTEN mutations?
Hypothesis:
H0: The distribution of disease-free survival is the same for PTEN-mutated and PTEN-wildtype samples.
H1: The distribution of dise... | 0.14043 | fail_to_reject | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_106/dataset.csv | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_106/question.txt | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_106/answer_key.json | 1,918 | 4 | [
"patient_id",
"sample_id",
"dfs_months",
"pten_mutated"
] | 66,666 | 54c7187df6b0e18e5e9aac74dbd315047abfe548cd1fd427a8d43b386b3387c8 |
mann_whitney_test/biodsa__breast_msk_2018__task_117 | mann_whitney_test | biodsa__breast_msk_2018__task_117 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_117 | false | Easy | Research Question:
Does tumor mutational burden (nonsynonymous) differ between primary and metastatic breast cancer samples in the MSK breast cancer cohort?
Hypothesis:
H0: The distribution of tumor mutational burden (nonsynonymous) is the same in Primary and Metastasis samples.
H1: The distribution of tumor mutationa... | 0 | reject | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_117/dataset.csv | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_117/question.txt | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_117/answer_key.json | 1,918 | 4 | [
"patient_id",
"sample_id",
"tmb_nonsynonymous",
"sample_type"
] | 94,220 | 6ad2d39e84fd8e0e5ec107d681036f8889c7e190cb4c2151ccc62868afcc8bb2 |
mann_whitney_test/biodsa__breast_msk_2018__task_124 | mann_whitney_test | biodsa__breast_msk_2018__task_124 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_124 | false | Easy | Research Question:
Does disease-free survival differ by overall hormone receptor status among samples in the MSK metastatic breast cancer cohort?
Hypothesis:
H0: The distribution of disease-free survival is the same for samples from patients with Positive and Negative overall hormone receptor status
H1: The distributi... | 0.000008 | reject | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_124/dataset.csv | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_124/question.txt | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_124/answer_key.json | 1,918 | 4 | [
"patient_id",
"sample_id",
"dfs_months",
"overall_hr_status_patient"
] | 80,105 | 42b3e6122058e840aaa5e3287a1350f19d1b129e8a254ca5ca2212388b99330a |
mann_whitney_test/biodsa__breast_msk_2018__task_82 | mann_whitney_test | biodsa__breast_msk_2018__task_82 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_82 | false | Easy | Research Question:
Among breast cancer samples from the MSK metastatic breast cancer cohort, does overall mutation count differ between samples with and without a PIK3CA mutation?
Hypothesis:
H0: The distribution of mutation count is the same for PIK3CA-mutated and PIK3CA-wildtype breast cancer samples.
H1: The distri... | 0 | reject | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_82/dataset.csv | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_82/question.txt | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_82/answer_key.json | 1,834 | 4 | [
"patient_id",
"sample_id",
"mutation_count",
"pik3ca_mutated"
] | 62,561 | a88e16eebaf332be788de3fb9a539f146f08a0eb350ae5742b803a3707f05f49 |
mann_whitney_test/biodsa__breast_msk_2018__task_84 | mann_whitney_test | biodsa__breast_msk_2018__task_84 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_84 | false | Easy | Research Question:
Among breast cancer samples in the MSK metastatic breast cancer sequencing cohort, does mutation count differ between samples with and without an ERBB2 mutation?
Hypothesis:
H0: The distribution of mutation count is the same in ERBB2-mutated and ERBB2-wildtype breast cancer samples.
H1: The distribu... | 0.000018 | reject | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_84/dataset.csv | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_84/question.txt | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_84/answer_key.json | 1,834 | 4 | [
"patient_id",
"sample_id",
"mutation_count",
"erbb2_mutated"
] | 62,560 | 9b80a3aefc9de1a1c85d1cebb36167b80c1c154d9b383188415302ddf65348f3 |
mann_whitney_test/biodsa__breast_msk_2018__task_87 | mann_whitney_test | biodsa__breast_msk_2018__task_87 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_87 | false | Easy | Research Question:
Among breast cancer samples in the MSK metastatic breast cancer sequencing cohort, does mutation count differ between KRAS-mutated and KRAS-wildtype samples?
Hypothesis:
H0: The distribution of mutation count is the same in KRAS-mutated and KRAS-wildtype breast cancer samples.
H1: The distribution o... | 0.002111 | reject | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_87/dataset.csv | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_87/question.txt | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_87/answer_key.json | 1,834 | 4 | [
"patient_id",
"sample_id",
"mutation_count",
"kras_mutated"
] | 62,559 | 85e92dda4b7199a9b5c27df0abebc45c58cb18d2d8c946687833b5372b233d02 |
mann_whitney_test/biodsa__breast_msk_2018__task_88 | mann_whitney_test | biodsa__breast_msk_2018__task_88 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_88 | false | Easy | Research Question:
Among breast cancer samples in the MSK 2018 cohort, does mutation count differ between BRAF-mutated and BRAF-wildtype samples?
Hypothesis:
H0: The distribution of mutation count is the same in BRAF-mutated and BRAF-wildtype samples.
H1: The distribution of mutation count differs between BRAF-mutated... | 0.012382 | reject | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_88/dataset.csv | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_88/question.txt | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_88/answer_key.json | 1,834 | 4 | [
"patient_id",
"sample_id",
"mutation_count",
"braf_mutated"
] | 62,559 | 82b01fb2aa95bee13e8570de54dd06185c301a1e26c4700601b804dac8bf63dd |
mann_whitney_test/biodsa__breast_msk_2018__task_97 | mann_whitney_test | biodsa__breast_msk_2018__task_97 | biodsa | biodsa__breast_msk_2018 | null | biodsa__breast_msk_2018__task_97 | false | Easy | Research Question:
In the MSK metastatic breast cancer cohort, does tumor mutational burden (nonsynonymous) differ between samples with and without an ARID1A mutation?
Hypothesis:
H0: The distribution of tumor mutational burden (nonsynonymous) is the same in ARID1A-mutated and ARID1A-wildtype breast cancer samples
H1:... | 0 | reject | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_97/dataset.csv | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_97/question.txt | tasks/mann_whitney_test/biodsa__breast_msk_2018__task_97/answer_key.json | 1,918 | 4 | [
"patient_id",
"sample_id",
"tmb_nonsynonymous",
"arid1a_mutated"
] | 79,715 | a76d31bcb8e24a52c6f1b7ebf71d20f97976d0d8a1c800aef078c29ec3355cab |
mann_whitney_test/biodsa__chol_msk_2018__task_38 | mann_whitney_test | biodsa__chol_msk_2018__task_38 | biodsa | biodsa__chol_msk_2018 | null | biodsa__chol_msk_2018__task_38 | false | Easy | Research Question:
Does mutation count differ between TP53-mutated and TP53-wildtype cholangiocarcinoma samples?
Hypothesis:
H0: The distribution of mutation count is the same in TP53-mutated and TP53-wildtype cholangiocarcinoma samples
H1: The distribution of mutation count differs between TP53-mutated and TP53-wildt... | 0.000257 | reject | tasks/mann_whitney_test/biodsa__chol_msk_2018__task_38/dataset.csv | tasks/mann_whitney_test/biodsa__chol_msk_2018__task_38/question.txt | tasks/mann_whitney_test/biodsa__chol_msk_2018__task_38/answer_key.json | 182 | 4 | [
"patient_id",
"sample_id",
"mutation_count",
"tp53_mutated"
] | 6,249 | 46d8ee8935de338708ed61d205e749f6604f263b8c864e8a564d6cd051cc65aa |
mann_whitney_test/biodsa__chol_msk_2018__task_61 | mann_whitney_test | biodsa__chol_msk_2018__task_61 | biodsa | biodsa__chol_msk_2018 | null | biodsa__chol_msk_2018__task_61 | false | Easy | Research Question:
Does overall survival differ between female and male patients in the cholangiocarcinoma cohort?
Hypothesis:
H0: The distribution of overall survival is the same in female and male patients.
H1: The distribution of overall survival differs between female and male patients.
STUDY DESIGN:
- Type: Obse... | 0.18624 | fail_to_reject | tasks/mann_whitney_test/biodsa__chol_msk_2018__task_61/dataset.csv | tasks/mann_whitney_test/biodsa__chol_msk_2018__task_61/question.txt | tasks/mann_whitney_test/biodsa__chol_msk_2018__task_61/answer_key.json | 195 | 4 | [
"patient_id",
"sample_id",
"os_months",
"sex"
] | 8,249 | 397279bf8dd7e17657eca60363329c293fc3383104c4f48b3851ddfe45df3dad |
mann_whitney_test/biodsa__gbm_tcga_pub2013__task_34 | mann_whitney_test | biodsa__gbm_tcga_pub2013__task_34 | biodsa | biodsa__gbm_tcga_pub2013 | null | biodsa__gbm_tcga_pub2013__task_34 | false | Easy | Research Question:
Does mutation count differ by MGMT methylation status in glioblastoma multiforme tumors from the TCGA GBM study?
Hypothesis:
H0: The distribution of mutation count is the same in MGMT-methylated and non-methylated tumors
H1: The distribution of mutation count differs between MGMT-methylated and non-... | 0.002446 | reject | tasks/mann_whitney_test/biodsa__gbm_tcga_pub2013__task_34/dataset.csv | tasks/mann_whitney_test/biodsa__gbm_tcga_pub2013__task_34/question.txt | tasks/mann_whitney_test/biodsa__gbm_tcga_pub2013__task_34/answer_key.json | 194 | 2 | [
"mutation_count",
"mgmt_methylated"
] | 1,778 | 142a4ca7d7ef23a77ceb1ea02e954d5d08bb58d81366f0bbc41c277dcdbb48ee |
mann_whitney_test/biodsa__ihch_msk_2021__task_23 | mann_whitney_test | biodsa__ihch_msk_2021__task_23 | biodsa | biodsa__ihch_msk_2021 | null | biodsa__ihch_msk_2021__task_23 | false | Easy | Research Question:
Do samples with ARID1A-mutated tumors have different mutation counts than samples with ARID1A-wildtype tumors in the MSK intrahepatic cholangiocarcinoma cohort?
Hypothesis:
H0: The distribution of mutation count is the same in ARID1A-mutated and ARID1A-wildtype samples.
H1: The distribution of mutat... | 0.000035 | reject | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_23/dataset.csv | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_23/question.txt | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_23/answer_key.json | 379 | 4 | [
"patient_id",
"sample_id",
"mutation_count",
"arid1a_mutated"
] | 13,161 | c2e6d861e9db62204880d837674c3c13cb098e92d78217a4f6f623591bb2e1f8 |
mann_whitney_test/biodsa__ihch_msk_2021__task_29 | mann_whitney_test | biodsa__ihch_msk_2021__task_29 | biodsa | biodsa__ihch_msk_2021 | null | biodsa__ihch_msk_2021__task_29 | false | Easy | Research Question:
Is fraction of genome altered different between FGFR2-mutated and FGFR2-wildtype intrahepatic cholangiocarcinoma samples?
Hypothesis:
H0: The distribution of fraction of genome altered is the same in FGFR2-mutated and FGFR2-wildtype intrahepatic cholangiocarcinoma samples.
H1: The distribution of fr... | 0.087006 | fail_to_reject | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_29/dataset.csv | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_29/question.txt | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_29/answer_key.json | 412 | 4 | [
"patient_id",
"sample_id",
"fraction_genome_altered",
"fgfr2_mutated"
] | 15,435 | acf64c7fbdaa3625746fb21863d128a4cb2a1a16402d799d7201bcb8449fc50a |
mann_whitney_test/biodsa__ihch_msk_2021__task_33 | mann_whitney_test | biodsa__ihch_msk_2021__task_33 | biodsa | biodsa__ihch_msk_2021 | null | biodsa__ihch_msk_2021__task_33 | false | Easy | Research Question:
Does tumor mutational burden (nonsynonymous) differ by KRAS mutation status among intrahepatic cholangiocarcinoma samples?
Hypothesis:
H0: The distribution of tumor mutational burden (nonsynonymous) is the same in KRAS-mutated and KRAS-wildtype intrahepatic cholangiocarcinoma samples.
H1: The distri... | 0.076105 | fail_to_reject | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_33/dataset.csv | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_33/question.txt | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_33/answer_key.json | 412 | 4 | [
"patient_id",
"sample_id",
"tmb_nonsynonymous",
"kras_mutated"
] | 18,071 | e1ea0fc17dcea370adeb284f89bf689704931461b0bedc51eb52f0e763d31dba |
mann_whitney_test/biodsa__ihch_msk_2021__task_36 | mann_whitney_test | biodsa__ihch_msk_2021__task_36 | biodsa | biodsa__ihch_msk_2021 | null | biodsa__ihch_msk_2021__task_36 | false | Easy | Research Question:
Is tumor mutational burden (nonsynonymous) different between PIK3CA-mutated and PIK3CA-wildtype intrahepatic cholangiocarcinoma samples?
Hypothesis:
H0: The distribution of tumor mutational burden (nonsynonymous) is the same in PIK3CA-mutated and PIK3CA-wildtype samples
H1: The distribution of tumor... | 0.00569 | reject | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_36/dataset.csv | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_36/question.txt | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_36/answer_key.json | 412 | 4 | [
"patient_id",
"sample_id",
"tmb_nonsynonymous",
"pik3ca_mutated"
] | 18,073 | 66d43d702ba5cfe4e9548b7789f2267e37a2ed54ccc1c0477c28227df106873a |
mann_whitney_test/biodsa__ihch_msk_2021__task_43 | mann_whitney_test | biodsa__ihch_msk_2021__task_43 | biodsa | biodsa__ihch_msk_2021 | null | biodsa__ihch_msk_2021__task_43 | false | Easy | Research Question:
Among samples from the MSK intrahepatic cholangiocarcinoma cohort, does overall survival differ between patients with BRAF-mutated tumors and those with BRAF-wildtype tumors?
Hypothesis:
H0: The distribution of overall survival is the same in the BRAF-mutated and BRAF-wildtype groups.
H1: The distri... | 0.196842 | fail_to_reject | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_43/dataset.csv | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_43/question.txt | tasks/mann_whitney_test/biodsa__ihch_msk_2021__task_43/answer_key.json | 412 | 4 | [
"patient_id",
"sample_id",
"os_months",
"braf_mutated"
] | 17,518 | 16648890b1d3b7ccd728254e42612798a1ede39caac8fdf965d4b1c5d2bd70a6 |
mann_whitney_test/biodsa__lgggbm_tcga_pub__task_17 | mann_whitney_test | biodsa__lgggbm_tcga_pub__task_17 | biodsa | biodsa__lgggbm_tcga_pub | null | biodsa__lgggbm_tcga_pub__task_17 | false | Easy | Research Question:
Does tumor mutational burden (nonsynonymous) differ by IDH status among diffuse lower-grade glioma and glioblastoma tumor samples in the TCGA lgggbm cohort?
Hypothesis:
H0: The distribution of tumor mutational burden (nonsynonymous) is the same in IDH-mutant and IDH-wildtype tumor samples.
H1: The d... | 0 | reject | tasks/mann_whitney_test/biodsa__lgggbm_tcga_pub__task_17/dataset.csv | tasks/mann_whitney_test/biodsa__lgggbm_tcga_pub__task_17/question.txt | tasks/mann_whitney_test/biodsa__lgggbm_tcga_pub__task_17/answer_key.json | 812 | 4 | [
"sample_id",
"patient_id",
"tmb_nonsynonymous",
"idh_status"
] | 36,626 | f60a1dc8c4577b9368381488cdaa0e37c1a4c09b78272a9a98eacabbc934dcde |
mann_whitney_test/biodsa__lgggbm_tcga_pub__task_19 | mann_whitney_test | biodsa__lgggbm_tcga_pub__task_19 | biodsa | biodsa__lgggbm_tcga_pub | null | biodsa__lgggbm_tcga_pub__task_19 | false | Easy | Research Question:
Does tumor mutational burden (nonsynonymous) differ by 1p/19q codeletion status among samples from the TCGA diffuse lower-grade glioma and glioblastoma cohort?
Hypothesis:
H0: The distribution of tumor mutational burden (nonsynonymous) is the same in codel and non-codel samples.
H1: The distribution... | 0.108056 | fail_to_reject | tasks/mann_whitney_test/biodsa__lgggbm_tcga_pub__task_19/dataset.csv | tasks/mann_whitney_test/biodsa__lgggbm_tcga_pub__task_19/question.txt | tasks/mann_whitney_test/biodsa__lgggbm_tcga_pub__task_19/answer_key.json | 435 | 4 | [
"sample_id",
"patient_id",
"tmb_nonsynonymous",
"codel_status"
] | 21,117 | e242ed4caf5222dfe6166b90340d350fd5735f6207473214b3cead3a76ca7a91 |
mann_whitney_test/biodsa__luad_tcga_pub__task_30 | mann_whitney_test | biodsa__luad_tcga_pub__task_30 | biodsa | biodsa__luad_tcga_pub | null | biodsa__luad_tcga_pub__task_30 | false | Easy | Research Question:
Among lung adenocarcinoma samples from the TCGA Nature 2014 cohort, does Mutation Count differ between KRAS-mutated and KRAS wild-type samples?
Hypothesis:
H0: The distribution of Mutation Count is the same in KRAS-mutated and KRAS wild-type samples
H1: The distribution of Mutation Count differs bet... | 0.078073 | fail_to_reject | tasks/mann_whitney_test/biodsa__luad_tcga_pub__task_30/dataset.csv | tasks/mann_whitney_test/biodsa__luad_tcga_pub__task_30/question.txt | tasks/mann_whitney_test/biodsa__luad_tcga_pub__task_30/answer_key.json | 230 | 4 | [
"sample_id",
"patient_id",
"mutation_count",
"kras_status"
] | 9,722 | ac01601f3036632edeced1e9f8f71762ec3c44c0c11936c9c28d7360ad0be452 |
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