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<filename>legacy/scrap.py from mc import Xzy, Slot from scipy.spatial.distance import euclidean from scipy.linalg import solve import time import sys import random import itertools import numpy import os import cPickle import math import json def mine(bot, types=[14, 15]): TORCH = bot._block_ids['torch'] DIRT = bo...
# -*- coding: utf-8 -*- """ @author:XuMing(<EMAIL>) @description: 智能标注 """ import os from time import time import cleanlab import numpy as np from cleanlab.pruning import get_noise_indices from scipy.sparse import csr_matrix from sklearn.linear_model import LogisticRegression from sklearn.model_selection import train...
<reponame>haribharadwaj/codebasket from anlffr.helper import biosemi2mne as bs import mne import numpy as np import os import fnmatch from scipy.signal import savgol_filter as sg from scipy.io import savemat # Setup bayesian-weighted averaging def bayesave(x, trialdim=0, timedim=1, method='mean', smoothtrials=19): ...
""" This module provides fittable models based on 2D images. """ from __future__ import (absolute_import, division, print_function, unicode_literals) import warnings import logging import numpy as np import copy from astropy.modeling import Fittable2DModel from astropy.modeling.parameters imp...
<reponame>yjy941124/PPR-FCN import caffe import scipy.io as sio import os import cv2 import numpy as np import yaml from multiprocessing import Process, Queue import random import h5py import fast_rcnn.bbox_transform from fast_rcnn.nms_wrapper import nms from utils.cython_bbox import bbox_overlaps import numpy as np i...
import math import datetime import collections import statistics import itertools def is_prime(num): for i in range(2, int(math.sqrt(num)) + 1): if num % i == 0: return False return True def input_list(): ll = list(map(int, input().split(" "))) return ll tc = int(input()) for ...
<filename>skijumpdesign/utils.py import numpy as np import sympy as sm from sympy.utilities.autowrap import autowrap EPS = np.finfo(float).eps # NOTE : These parameters are more associated with an environment, but this # doesn't warrant making a class for them. Maybe a namedtuple would be useful # though. GRAV_ACC = ...
<reponame>mmckerns/diffpy.srxplanar import numpy as np import scipy as sp import os from functools import partial from scipy.optimize import minimize, leastsq, fmin_bfgs, fmin_l_bfgs_b, fmin_tnc, minimize_scalar, fmin_powell, \ fmin_cg, fmin_slsqp, brent, golden from matplotlib import rcPara...
<filename>OptionPricing.py<gh_stars>0 import numpy as np from scipy.stats import norm from abc import ABCMeta, abstractmethod def st(z, s0, r, sigma, T): return s0 * np.exp((r - sigma ** 2 / 2) * T + sigma * np.sqrt(T) * z) s0 = 80; r = 0.1; sigma = 0.2; T = 5; K = 100 def call(s0, r, sigma, T, K): d1 = ...
<filename>2-resources/_Past-Projects/LambdaSQL-master/LambdaSQL-master/module1/rpg_db.py """ Unit 3 Sprint 2 SQL Module 1 Part 1 Querying a Database """ import statistics import sqlite3 as sql from collections import defaultdict # Connect to local database connection = sql.connect("rpg_db.sqlite3").cursor() # connect...
<filename>newsolver.py<gh_stars>1-10 import numpy as np import pandas as pd from scipy.integrate import ode import json from scipy.integrate import odeint from numba import njit import time @njit() def odeSys(t, zeta, Lambda): z = np.exp(zeta) term1 = np.dot(Lambda,z) term2 = np.dot(z.T,term1) dzetadt ...
import numpy as np from scipy.special import logit, expit from seaborn import kdeplot from scipy import sparse from scipy.stats import gaussian_kde import pandas as pd import six import sys sys.path.append("..") import utils import pymc3 as pm import tqdm import itertools import matplotlib.pyplot as plt from mpl_t...
<gh_stars>0 """ Dveloper: vujadeyoon E-mail: <EMAIL> Github: https://github.com/vujadeyoon/vujade Title: vujade_metric.py Description: A module to measure performance for a developed DNN model Acknowledgement: 1. This implementation is highly inspired from HolmesShuan. 2. Github: https://github.com/HolmesShua...
import numpy as np import skimage.draw as skd import scipy.ndimage as simg import torch def get_random_smps(x_tr, y_tr, x_va, y_va, n_tr, n_va, n_tot_tr, n_tot_va, n_c): tridxs = [np.random.choice(n_tot_tr, n_tr) for _ in range(n_c)] vaidxs = [np.random.choice(n_tot_va, n_va) for _ in range(n_c)] Xtr = tor...
# =============================================================================== # Copyright 2016 <NAME> # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LI...
import pandas as pd import scipy.stats import random def generate_bus_speed(n): bus_speed_list = [] for i in range(0,n): speed_temp = random.uniform(15,30) bus_speed_list.append(speed_temp) #print(randomlist) return(bus_speed_list)
#!/usr/bin/env python3 # import keyboard from dependency import np, pd, sp # from S3Synth import S3Synth, Envelope from S3Utils import freq_calc, find_Ns, get_note, find_maxsig, make_octaves from S3DataUtils import train_S3, create_FunctionFrame from matplotlib import pyplot as plt from scipy.io.wavfile import write ...
r"""$Z$ partial widths in the SM. Based on arXiv:1401.2447""" from math import log from scipy import constants # units: GeV=hbar=c=1 GeV = constants.giga * constants.eV s = GeV / constants.hbar m = s / constants.c b = 1.e-28 * m**2 pb = constants.pico * b # Table 5 of 1401.2447 cdict = { 'Gammae,mu': [83.966, -0...
<filename>py_qt/nonparam_regression.py """ :Author: <NAME> <<EMAIL>> Module implementing non-parametric regressions using kernel methods. """ import numpy as np from scipy import linalg import kde_bandwidth import kernels import npr_methods class NonParamRegression(object): r""" Class performing kernel-bas...
import numpy as np import scipy.spatial.distance as dist from permaviss.simplicial_complexes.differentials import complex_differentials from permaviss.simplicial_complexes.vietoris_rips import vietoris_rips from permaviss.persistence_algebra.PH_classic import persistent_homology def test_persistent_homology(): ...
#!/usr/bin/env python # -*- coding: utf-8 -*- r""" ARG model ========= The code is an implementation of ARG model given in [1]_. Its major features include: * simulation of stochastic volatility and returns * estimation using both MLE and GMM * option pricing References ---------- .. [1] <NAME> and <NAM...
<gh_stars>1-10 # copyright <NAME> (2018) # Released uder Lesser Gnu Public License (LGPL) # See LICENSE file for details. import ase from ase import Atoms, Atom import numpy as np from numpy.linalg import norm import itertools import fractions from math import pi, floor from ase.build import cut, make_supercell from a...
<filename>GS2/GS2run.py #!/usr/bin/env python3 ################################################ ################################################ stellDesigns=['WISTELL-A','NZ1988','HSX','KuQHS48','Drevlak','NCSX','ARIES-CS','QAS2','ESTELL','CFQS','Henneberg'] normalizedfluxvec = [0.01] import os from os import path, ...
from typing import Any, Dict, Optional, Tuple import numpy as np from xaitk_saliency.interfaces.perturb_image import PerturbImage from skimage.draw import ellipse from scipy.ndimage.filters import gaussian_filter class SlidingRadial (PerturbImage): """ Produce perturbation matrices generated by sliding a radi...
<gh_stars>1-10 import numpy as np import matplotlib.pyplot as plt import logging import sys from scipy import linalg import reltest.util as util from reltest.mctest import MCTestPSI from reltest.mmd import MMD_Linear, MMD_U from reltest.ksd import KSD_U, KSD_Linear from reltest import kernel from kmod.mctest import ...
<gh_stars>1-10 import numpy as np from scipy import sparse from sklearn.utils.extmath import randomized_svd from datetime import datetime import logging from multiprocessing import Pool def getvectors(X): for col in range(X.shape[1]): yield X[:, col] def dotprod(v): return v.transpose().dot(v).toden...
<filename>RL_dispersion.py # According to <NAME> "On waves in an elastic plate" # He used xi for k (spatial frequency) # sigma for omega (radial freq.) # f for h/2 (half thickness) # Making the relevant changes we get the following code for Si and Ai from scipy import * from pylab import * from...
import warnings import numpy as np from scipy.integrate import IntegrationWarning, quad, quad_vec # Load the C library import os.path from pathlib import Path import ctypes # # Commands to manually generate # gcc -Wall -fPIC -c voigt.c # gcc -shared -o libvoigt.so voigt.o dllabspath = Path(os.path.dirname(os.path.abs...
""" This file is part of Autognuplotpy, autogpy. """ from __future__ import print_function import os import numpy as np import warnings from collections import OrderedDict import re from . import autognuplot_terms from . import plot_helpers try: import pandas as pd import pandas pandas_support_enabled ...
<filename>analysis/xmodularity_informe.py<gh_stars>1-10 # -*- coding: utf-8 -*- from src.env import DATA from src.postproc.utils import load_elec_file, order_dict from analysis.fig1_fig2_and_stats import plot_matrix, multipage from analysis.bha import cross_modularity import os from os.path import join as opj import n...
import math import dlib import appdirs import requests import bz2 import cv2 import numpy as np from scipy.spatial import distance as dist from os import makedirs, path from imutils import face_utils, resize from imutils.video import VideoStream, FileVideoStream # def dist(a, b): # return math.sqrt((a * a) + (b *...
<filename>Project 3/3.1.py # Computes the volume of a 10-dimensional sphere using midpoint integration import math as math import numpy as np from scipy.optimize import curve_fit from time import process_time import matplotlib.pyplot as plt import matplotlib.ticker as ticker from matplotlib.ticker import MaxNLocator ...
<reponame>vinnamkim/GEM-Benchmark from gem.evaluation import visualize_embedding as viz from gem.utils import graph_util, plot_util from .static_graph_embedding import StaticGraphEmbedding import sys from time import time import scipy.sparse.linalg as lg import scipy.sparse as sp import scipy.io as sio import n...
<reponame>marrcio/relate-kanji import pygame, sys, traceback import pygame.freetype from pygame.locals import * import toolbox as tb from statistics import Statistics WINDOWWIDTH = 640 X_CENTER = 320 WINDOWHEIGHT = 480 NEXT_FLAG = 1 EXIT_FLAG = -1 SUCCESS_FLAG = 0 RIGHT_FLAG = 2 LEFT_FLAG = 3 REDRAW_FLAGS = {SUCCESS_F...
from __future__ import division, print_function __author__ = "adrn <<EMAIL>>" # Third-party import astropy.units as u import numpy as np from scipy.optimize import root from gala.potential import HernquistPotential from gala.units import galactic # use the same mass function as Gnedin from .gnedin import sample_mas...
<reponame>wsgan001/AnomalyDetection import math import numpy as np from sklearn.neighbors import DistanceMetric from scipy.spatial.distance import mahalanobis; from sklearn.metrics.pairwise import cosine_similarity # https://spectrallyclustered.wordpress.com/2010/06/05/sprint-1-k-means-spectral-clustering/ def gaussia...
import random import numpy as np import os import argparse import decimal import warnings import sys sys.path.append('..') from multiprocessing import Pool from functools import partial from operator import is_not from scipy import optimize import logging import astropy.units as u import SNReviewed as SN def parse_comm...
import numpy as np from numpy.random import random_sample, randint import pandas as pd from scipy.stats import multivariate_normal from scipy.special import logsumexp from .system import System, multivariate_gaussian_logpdf, decompose from numba import njit, objmode import time from tqdm import tqdm @njit def po...
#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on Fri May 10 14:46:37 2019 Funções de forma para a viga de 4 nós de Euler-Bernouilli Completo! @author: markinho """ import sympy as sp import numpy as np import matplotlib.pyplot as plt #para viga L = sp.Symbol('L') x1 = -L/2 x2 = -L/6 x3 = L/6 x4 = L/2...
import numpy as np import tifffile import subprocess import os import csv from tabulate import tabulate from types import SimpleNamespace from pathlib import Path from itertools import zip_longest from glob import glob from scipy import ndimage from scipy.ndimage import label, zoom from scipy....
<reponame>SPOC-lab/gel-imaging-system<filename>long-yuv-array.py # https://picamera.readthedocs.io/en/release-1.13/recipes1.html from picamera import PiCamera from time import sleep from fractions import Fraction # Force sensor mode 3 (the long exposure mode), set # the framerate to 1/6fps, the shutter speed to 6s, #...
<filename>train.py #!/usr/bin/env python """Train ANN""" import sys import glob import datetime import time import pickle from numpy import array, zeros, r_ from numpy.random import seed, randn from cost_function import cost_function, gradients from scipy.optimize import fmin_l_bfgs_b from scipy.misc import imread, imr...
<gh_stars>10-100 import numpy as np from catboost import Pool, CatBoostRegressor from gbdt_uncertainty.data import load_regression_dataset, make_train_val_test from scipy.stats import ttest_rel from gbdt_uncertainty.assessment import prr_regression, nll_regression, calc_rmse, ens_nll_regression, ood_detect, ens_rms...
<gh_stars>0 #envi_perc.py #multilayer perceptron to reconstruct SSTDR waveforms from environment data import torch import torch.nn as nn #import matplotlib.pyplot as plt #done below; import procedure differs depending on SHOW_PLOTS import random import numpy as np from tkinter.filedialog import askopenfilename...
# Copyright 2013 <NAME> and <NAME> # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in wri...
from tensorforce.environments import Environment from tensorforce.agents import Agent import numpy as np import torch.nn.functional as F from statistics import mean environment = Environment.create( environment=HelpdeskEnv, max_episode_timesteps=100 ) agent = Agent.create( agent='ppo', environment=environment...
<gh_stars>1-10 """ This component of the gamma_analysis code is in charge of identifying peaks in a given energy spectra. The peaks are identified by the difference in counts relative to its surrounding bins. """ from __future__ import print_function import numpy as np import math as mt from matplotlib import pyplot as...
import numpy as np from scipy.fftpack import fft , fft2 , rfft import matplotlib.pyplot as plt import time freq = 32 sampling_rate=55 t= np.linspace (0, 2, 2 *sampling_rate, endpoint=False) x1= np.sin(freq* 2* np.pi * t) x2= np.cos(5* 2* np.pi * t) x3= np.sin(25* 2* np.pi * t) x=x1+x2+x3 fig = plt.figure(1) ax1 = f...
<reponame>hitsh95/DespeckleNet import numpy as np import torch import PIL.Image as Image import time import cv2 from scipy.io import loadmat import math import os import shutil from tensorboardX import SummaryWriter def generate_random_phase(): p = np.random.rand(512, 512) p = np.where(p<0.7, 0....
import typing from pathlib import Path import numpy as np import scipy.fftpack from scipy import signal import einops import functools import torch import paderbox as pb import padertorch as pt import padercontrib as pc from padertorch.contrib.cb.transform import stft as pt_stft, istft as pt_istft from padertorch.c...
import numpy as np import scipy.stats import pytest from skypy.utils.photometry import HAS_SPECLITE @pytest.mark.flaky def test_sampling_coefficients(): from skypy.galaxies.spectrum import dirichlet_coefficients alpha0 = np.array([2.079, 3.524, 1.917, 1.992, 2.536]) alpha1 = np.array([2.265, 3.862, 1.92...
<reponame>4DNucleome/big-fish # -*- coding: utf-8 -*- # Author: <NAME> <<EMAIL>> # License: BSD 3 clause """Filtering functions.""" import numpy as np from .utils import check_array from .utils import check_parameter from .preprocess import cast_img_float32 from .preprocess import cast_img_float64 from .preprocess ...
<reponame>NeonOcean/Environment import operator import random import services import sims4.resources from sims4.localization import TunableLocalizedString from sims4.tuning.instances import HashedTunedInstanceMetaclass from sims4.tuning.tunable import HasTunableReference, OptionalTunable, Tunable, TunableEnumEntry, Tu...
import os import numpy as np from PIL import Image class FileLoader(): def cache(self, path): return True def save_cache(self, cache_path): pass def load_cache(self, cache_path): pass def __call__(self, path): raise NotImplemented class ImageLoader(FileLoader): de...
# Standard imports import argparse import asyncio import json import os import socket import statistics as stats import sys import traceback from datetime import datetime from difflib import get_close_matches from random import choice, randint from sys import stderr from time import time import pytz import requests i...
<filename>attention_models/original_attention.py import matplotlib matplotlib.use('Agg') from scipy import io import tensorflow as tf import pandas as pd import numpy as np import os, h5py, sys, argparse import pdb import time import json from collections import defaultdict import time import cv2 import argparse im...
""" Implements grid search for naive fitting """ import numpy as np from scipy.optimize import OptimizeResult __all__ = ['grid_search'] def grid_search(func, x0, args=(), options={}, callback=None): """ Optimize with naive grid search in a way that outputs an OptimizeResult Parameters ---------- ...
#!/usr/bin/python from numpy import savetxt, loadtxt, array from deap import base, creator, tools from scipy import interpolate from pickle import load, dump from os import system, access, remove, path from time import sleep from glob import glob from queue import Queue, Empty from threading import Thread fro...
<reponame>lidiaxp/plannie # -*- coding: utf-8 -*- # import rospy import math import numpy as np import matplotlib.pyplot as plt from scipy import interpolate from curves.bezier import Bezier from curves import bSpline import psutil import os from curves.spline3D import generate_curve from mpl_toolkits.mplot3d.art3d imp...
import typing as t import numpy as np import scipy.stats def z_test( samples: t.Sequence[float], true_var: float, hypothesis_mean: float, tail: str = "both", ): r"""Z-test for population mean with normal data of known variance. Assumptions: data i.i.d. x_{1}, ..., x_{n} ~ N(mu, sigma^{2}), w...
<reponame>93xiaoming/RL_state_preparation import numpy as np from scipy.linalg import expm class Env( object): def __init__(self, dt=np.pi/10): super(Env, self).__init__() self.n_actions = 2 self.n_states = 4 self.state = np.array([1,0,0,0]) self.nstep=0 ##count num...
import os import argparse import pandas as pd import numpy as np from vlpi.data.ClinicalDataset import ClinicalDataset,ClinicalDatasetSampler from vlpi.vLPI import vLPI from sklearn.metrics import average_precision_score from scipy.stats import linregress """ This script performs is assess increase in case severity f...
<reponame>ericgorday/SubjuGator import pickle import numpy as np import matplotlib.pyplot as plt from sub8_vision_tools import machine_learning as ml from scipy.ndimage import convolve from sklearn import linear_model, metrics from sklearn.cross_validation import train_test_split from sklearn.neural_network import Ber...
<filename>correspondence/product_manifold_filters/degenerate_assignment_problem.py<gh_stars>1-10 ## Standard Libraries ## import sys import os from typing import List ## Numerical Libraries ## import numpy as np import math ## Local Imports ## cur_dir = os.path.dirname(__file__) sys.path.insert(1,os.path.join(cur_dir...
#!/usr/bin/env python from remimi.monodepth.bilateral_filtering import sparse_bilateral_filtering from remimi.monodepth.dpt import DPTDepthEstimator from remimi.utils.depth import colorize2 import torch import torchvision import base64 # import cupy import cv2 import getopt import glob import h5py import io import ma...
<reponame>bt402/pypercolate # encoding: utf-8 """ Low-level routines to implement the Newman-Ziff algorithm for HPC See also -------- percolate : The high-level module """ from __future__ import (absolute_import, division, print_function, unicode_literals) from future.builtins import dict, n...
<reponame>kieranrcampbell/curver-python """ Main Curver file: Curve reconstruction from noisy data Based on "Curve reconstruction from unorganized points", In-<NAME>, Computer Aided Geometric Design 17 <EMAIL> """ import numpy as np import statsmodels.api as sm from scipy.optimize import minimize """ NB in general...
<reponame>brunorijsman/euler-problems-python from fractions import Fraction def fixed(): return 2 def nth(n): if n % 3 == 1: return (n // 3 + 1) * 2 else: return 1 def tail(start_term, total_terms): if start_term == total_terms: return Fraction(1, nth(start_term)) else: a = Fraction(nth(sta...
<gh_stars>0 import numpy as np import scipy as sp import pandas as pd import matplotlib.pyplot as plt import seaborn as sb database = sb.load_dataset("flights") print(database) #Default kindnnya = "strip" #sb.catplot(x="month",y="passengers",data=database,kind='violin') sb.catplot(x="month",y="passengers",data=databa...
<gh_stars>1-10 # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, softwa...
import numpy as np import torch import os import sys from matplotlib import pyplot as plt import torch.nn as nn from xplain.attr import LayerIntegratedGradients, LayerGradientXActivation import skimage.io import torchvision import pickle import pandas as pd import scipy.interpolate as interpolate from torch.utils.data ...
#!/usr/bin/env python3 import os import statistics dir_path = os.path.dirname(os.path.realpath(__file__)) file = open(dir_path + "/input.txt", "r") ints = [int(n) for n in file.read().strip().split(',')] # ints = [16,1,2,0,4,2,7,1,2,14] median = statistics.median(sorted(ints)) fuel_costs = int(sum([abs(n-median) fo...
import numpy as np import MeshFEM, mesh import registration import os import pickle, gzip def load(path): """ load a pickled gzip object """ return pickle.load(gzip.open(path, 'rb')) def save(obj, path): """ save an object to a pickled gzip """ pickle.dump(obj, gzip.open(path, 'wb')) ...
<filename>utils/pascal_ctxt.py import os from os.path import join as pjoin import collections import json import numpy as np from skimage.io import imsave, imread import scipy.io as io import matplotlib.pyplot as plt import glob class pascalVOCContextLoader: """Data loader for the Pascal VOC semantic segmentation...
# -*- coding: utf-8 -*- """ Created on Tue Dec 15 15:28:30 2020 @author: """ import numpy as np from numpy import sqrt, arctan2, pi as π, cos, sin from scipy.spatial.transform import Rotation import sys _vec_0 = np.array([0., 0., 0.]) _vec_x = np.array([1., 0., 0.]) _vec_y = np.array([0., 1., 0.]) _vec_z = np.array(...
#!/usr/bin/env python import glob import os import sys import subprocess import scipy.stats import numpy #DEBUG_MCNEMAR = True DEBUG_MCNEMAR = False ground_truth_dirname = os.path.expanduser("~/src/audio-research/") #ground_truth_dirname = os.path.expanduser("~/src/audio-research/not-now") results_subdir = "mfs/" ...
<gh_stars>10-100 import pickle from collections import Counter import scipy.sparse as sp import numpy as np original_file = './movie_metadata_3class.csv' movie_idx_map = {} actor_idx_map = {} director_idx_map = {} keyword_idx_map = {} with open('movie_idx_map.pickle', 'rb') as m: movie_idx_map = pickle.load(m) wi...
import copy import logging import sys from typing import Callable import numpy as np import torch from pandas.api.types import is_numeric_dtype from scipy.interpolate import interp1d from torchinterp1d import Interp1d # Some useful functions # Set double precision by default torch.set_default_tensor_type(torch.Doubl...
<reponame>shubham526/SIGIR2021-Short-Final-Code-Release from typing import Dict, List import argparse import sys import json import tqdm from scipy import spatial import numpy as np import operator from bert_serving.client import BertClient bc = BertClient() def load_run_file(file_path: str) -> Dict[str, List[str]]:...
<gh_stars>0 import pandas as pd import numpy as np import ast from scipy.spatial.distance import pdist, squareform import pdb from utils import * def error_func(gt_labels, pred_labels): assert gt_labels.shape == pred_labels.shape, "Groundtruth labels should have the same shape as the prediction labels" if l...
""" run_experiment.py Run proposed method and baseline on the testing set """ import warnings warnings.simplefilter('always', UserWarning) import numpy as np import scipy.signal import os import soundfile as sf import librosa.core from utils.datasets import get_audio_files_DSD, get_audio_files_librispeech from utils....
import numpy as np from scipy import stats from scipy import integrate from scipy import special class Low(object): """Class for fatigue life estimation using frequency domain method by Low[1]. Notes ----- Numerical implementation supports only integer values of S-N curve parameter k (inver...
__author__ = '<NAME>' import numpy as np import scipy import numba from ..abstract_scale_factor import ScaleFactorABC ######################################################################################## # Utility Functions ######################################################################################## ...
from datasets import Examples from utils import euclidean_distance from collections import Counter from scipy.spatial import distance from sklearn.metrics.pairwise import pairwise_distances import numpy as np class kNN(object): """ Implementation of kNN algorithm """ def __init__(self, dataset): ...
from __future__ import division from __future__ import print_function import time import tensorflow as tf from utils import * from models import DSSGCN_GC_BATCH from tensorflow import set_random_seed import matplotlib.pyplot as plt import scipy.io as sio from sklearn.model_selection import StratifiedKFold import nump...
#!/usr/bin/env python from __future__ import print_function import math import numpy import matplotlib matplotlib.use("PDF") fig_size = [8.3,11.7] # din A4 params = {'backend': 'pdf', 'axes.labelsize': 10, 'text.fontsize': 10, 'legend.fontsize': 10, 'xtick.labelsize': 8, 'yti...
""" isicarchive.imfunc This module provides image helper functions and doesn't have to be imported from outside the main package functionality (IsicApi). Functions --------- color_superpixel Paint the pixels belong to a superpixel list in a specific color column_period Guess periodicity of data (image) column...
<filename>examples/wip_plot_spin_test.py # -*- coding: utf-8 -*- """ Spatial permutations for significance testing ============================================= This example shows how to perform spatial permutations tests (a.k.a spin-tests; `Alexander-Bloch et al., 2018, NeuroImage <https://www.ncbi.nlm.nih.gov/pmc/ a...
import argparse import os import torch from attrdict import AttrDict from sgan.data.loader import data_loader from sgan.models import TrajectoryGenerator from sgan.losses import displacement_error, final_displacement_error from sgan.utils import relative_to_abs, get_dset_path import collections import pickle impor...
<gh_stars>1-10 import numpy as np from scipy.stats import linregress from matplotlib import pyplot as pl def circles_monte_bad(n = 20, m = 1e7): m = int(m) def counts(r): rmax = x.max() rx = rmax * (2 * np.random.random(m) - 1) ry = rmax * (2 * np.random.random(m) - 1) return np...
<reponame>jcrist/pydy #!/usr/bin/env python import os import shutil import glob import numpy as np from numpy.testing import assert_allclose from sympy import symbols import sympy.physics.mechanics as me from ...system import System from ..shapes import Sphere from ..visualization_frame import VisualizationFrame fro...
from scipy.optimize import linear_sum_assignment import pandas as pd from graph_definition import compute_compatibility_matrix from host_response import HostResponse from guest_response import GuestResponse # download sample data guest_responses_df = pd.read_csv('sample_data/sample_guest_responses.csv') host_response...
def function_f_x_k(funcs, args, x_0, mu=None): ''' Parameters ---------- funcs : sympy.matrices.dense.MutableDenseMatrix 当前目标方程 args : sympy.matrices.dense.MutableDenseMatrix 参数列表 x_0 : list or tuple 初始迭代点列表(或元组) mu : float 正则化参数 ...
<filename>src/single_pulse.py """ Command line tool for single-pulse shapelet analysis """ import argparse import logging import os import bilby from scipy.stats import normaltest from . import flux from . import plot from .priors import update_toa_prior from .data import TimeDomainData from .likelihood import Pulsar...
<filename>source/demodulator.py #!/usr/bin/env python """ File Name: demodulator.py Author: <NAME> Date: 13 Apr 2008 Purpose: Takes waveform arrays as input and returns their estimated binary string. Usage: from demodulator import * demodinstance = demodulator() outputstring = demodinstance.run(inputarray) peri...
<reponame>maxxxxxdlp/code_share import numpy import json import pandas import pydotplus import matplotlib.pyplot as plt import matplotlib.image as pltimg from scipy import stats from sklearn import tree from sklearn import linear_model from sklearn.metrics import r2_score from sklearn.preprocessing import StandardScale...
<filename>notebooks/__code/registration/export_registration.py import numpy as np import copy from qtpy import QtGui from skimage import transform from scipy.ndimage.interpolation import shift from NeuNorm.normalization import Normalization class ExportRegistration: def __init__(self, parent=None, export_folder...
#!/opt/conda/envs/pCRACKER_p27/bin/python # All rights reserved. from collections import Counter, defaultdict, OrderedDict import cPickle as pickle import errno from itertools import combinations, permutations import itertools import os import shutil import subprocess import matplotlib matplotlib.use('Agg') import mat...
# coding: utf-8 # Density Based [k-means] Bootstrap from __future__ import print_function import logging as log from itertools import groupby from math import fabs, sqrt from operator import itemgetter as iget import numpy as np from ellipse import ellipse_intersect, ellipse_polyline from matplotlib.mlab import norm...
<filename>src/tiling.py import numpy as np import os import re from scipy import misc from keras.preprocessing.image import array_to_img, img_to_array, load_img from PIL import Image from PIL import ImageDraw from PIL import ImageFont import platform def tiling_flat(input_directory='prediction_inter'): root = '' ...