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opendns/pyinvestigate
investigate/investigate.py
Investigate.rr_history
def rr_history(self, query, query_type="A"): '''Get the RR (Resource Record) History of the given domain or IP. The default query type is for 'A' records, but the following query types are supported: A, NS, MX, TXT, CNAME For details, see https://investigate.umbrella.com/docs/api#dnsrr_domain ''' if query_type not in Investigate.SUPPORTED_DNS_TYPES: raise Investigate.UNSUPPORTED_DNS_QUERY # if this is an IP address, query the IP if Investigate.IP_PATTERN.match(query): return self._ip_rr_history(query, query_type) # otherwise, query the domain return self._domain_rr_history(query, query_type)
python
def rr_history(self, query, query_type="A"): '''Get the RR (Resource Record) History of the given domain or IP. The default query type is for 'A' records, but the following query types are supported: A, NS, MX, TXT, CNAME For details, see https://investigate.umbrella.com/docs/api#dnsrr_domain ''' if query_type not in Investigate.SUPPORTED_DNS_TYPES: raise Investigate.UNSUPPORTED_DNS_QUERY # if this is an IP address, query the IP if Investigate.IP_PATTERN.match(query): return self._ip_rr_history(query, query_type) # otherwise, query the domain return self._domain_rr_history(query, query_type)
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Get the RR (Resource Record) History of the given domain or IP. The default query type is for 'A' records, but the following query types are supported: A, NS, MX, TXT, CNAME For details, see https://investigate.umbrella.com/docs/api#dnsrr_domain
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a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L155-L172
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.domain_whois
def domain_whois(self, domain): '''Gets whois information for a domain''' uri = self._uris["whois_domain"].format(domain) resp_json = self.get_parse(uri) return resp_json
python
def domain_whois(self, domain): '''Gets whois information for a domain''' uri = self._uris["whois_domain"].format(domain) resp_json = self.get_parse(uri) return resp_json
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Gets whois information for a domain
[ "Gets", "whois", "information", "for", "a", "domain" ]
a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L187-L191
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.domain_whois_history
def domain_whois_history(self, domain, limit=None): '''Gets whois history for a domain''' params = dict() if limit is not None: params['limit'] = limit uri = self._uris["whois_domain_history"].format(domain) resp_json = self.get_parse(uri, params) return resp_json
python
def domain_whois_history(self, domain, limit=None): '''Gets whois history for a domain''' params = dict() if limit is not None: params['limit'] = limit uri = self._uris["whois_domain_history"].format(domain) resp_json = self.get_parse(uri, params) return resp_json
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Gets whois history for a domain
[ "Gets", "whois", "history", "for", "a", "domain" ]
a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L193-L202
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.ns_whois
def ns_whois(self, nameservers, limit=DEFAULT_LIMIT, offset=DEFAULT_OFFSET, sort_field=DEFAULT_SORT): '''Gets the domains that have been registered with a nameserver or nameservers''' if not isinstance(nameservers, list): uri = self._uris["whois_ns"].format(nameservers) params = {'limit': limit, 'offset': offset, 'sortField': sort_field} else: uri = self._uris["whois_ns"].format('') params = {'emailList' : ','.join(nameservers), 'limit': limit, 'offset': offset, 'sortField': sort_field} resp_json = self.get_parse(uri, params=params) return resp_json
python
def ns_whois(self, nameservers, limit=DEFAULT_LIMIT, offset=DEFAULT_OFFSET, sort_field=DEFAULT_SORT): '''Gets the domains that have been registered with a nameserver or nameservers''' if not isinstance(nameservers, list): uri = self._uris["whois_ns"].format(nameservers) params = {'limit': limit, 'offset': offset, 'sortField': sort_field} else: uri = self._uris["whois_ns"].format('') params = {'emailList' : ','.join(nameservers), 'limit': limit, 'offset': offset, 'sortField': sort_field} resp_json = self.get_parse(uri, params=params) return resp_json
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Gets the domains that have been registered with a nameserver or nameservers
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a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L204-L215
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.search
def search(self, pattern, start=None, limit=None, include_category=None): '''Searches for domains that match a given pattern''' params = dict() if start is None: start = datetime.timedelta(days=30) if isinstance(start, datetime.timedelta): params['start'] = int(time.mktime((datetime.datetime.utcnow() - start).timetuple()) * 1000) elif isinstance(start, datetime.datetime): params['start'] = int(time.mktime(start.timetuple()) * 1000) else: raise Investigate.SEARCH_ERR if limit is not None and isinstance(limit, int): params['limit'] = limit if include_category is not None and isinstance(include_category, bool): params['includeCategory'] = str(include_category).lower() uri = self._uris['search'].format(quote_plus(pattern)) return self.get_parse(uri, params)
python
def search(self, pattern, start=None, limit=None, include_category=None): '''Searches for domains that match a given pattern''' params = dict() if start is None: start = datetime.timedelta(days=30) if isinstance(start, datetime.timedelta): params['start'] = int(time.mktime((datetime.datetime.utcnow() - start).timetuple()) * 1000) elif isinstance(start, datetime.datetime): params['start'] = int(time.mktime(start.timetuple()) * 1000) else: raise Investigate.SEARCH_ERR if limit is not None and isinstance(limit, int): params['limit'] = limit if include_category is not None and isinstance(include_category, bool): params['includeCategory'] = str(include_category).lower() uri = self._uris['search'].format(quote_plus(pattern)) return self.get_parse(uri, params)
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Searches for domains that match a given pattern
[ "Searches", "for", "domains", "that", "match", "a", "given", "pattern" ]
a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L231-L253
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.samples
def samples(self, anystring, limit=None, offset=None, sortby=None): '''Return an object representing the samples identified by the input domain, IP, or URL''' uri = self._uris['samples'].format(anystring) params = {'limit': limit, 'offset': offset, 'sortby': sortby} return self.get_parse(uri, params)
python
def samples(self, anystring, limit=None, offset=None, sortby=None): '''Return an object representing the samples identified by the input domain, IP, or URL''' uri = self._uris['samples'].format(anystring) params = {'limit': limit, 'offset': offset, 'sortby': sortby} return self.get_parse(uri, params)
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Return an object representing the samples identified by the input domain, IP, or URL
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a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L255-L261
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.sample
def sample(self, hash, limit=None, offset=None): '''Return an object representing the sample identified by the input hash, or an empty object if that sample is not found''' uri = self._uris['sample'].format(hash) params = {'limit': limit, 'offset': offset} return self.get_parse(uri, params)
python
def sample(self, hash, limit=None, offset=None): '''Return an object representing the sample identified by the input hash, or an empty object if that sample is not found''' uri = self._uris['sample'].format(hash) params = {'limit': limit, 'offset': offset} return self.get_parse(uri, params)
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Return an object representing the sample identified by the input hash, or an empty object if that sample is not found
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a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L263-L269
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.as_for_ip
def as_for_ip(self, ip): '''Gets the AS information for a given IP address.''' if not Investigate.IP_PATTERN.match(ip): raise Investigate.IP_ERR uri = self._uris["as_for_ip"].format(ip) resp_json = self.get_parse(uri) return resp_json
python
def as_for_ip(self, ip): '''Gets the AS information for a given IP address.''' if not Investigate.IP_PATTERN.match(ip): raise Investigate.IP_ERR uri = self._uris["as_for_ip"].format(ip) resp_json = self.get_parse(uri) return resp_json
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Gets the AS information for a given IP address.
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a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L298-L306
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.prefixes_for_asn
def prefixes_for_asn(self, asn): '''Gets the AS information for a given ASN. Return the CIDR and geolocation associated with the AS.''' uri = self._uris["prefixes_for_asn"].format(asn) resp_json = self.get_parse(uri) return resp_json
python
def prefixes_for_asn(self, asn): '''Gets the AS information for a given ASN. Return the CIDR and geolocation associated with the AS.''' uri = self._uris["prefixes_for_asn"].format(asn) resp_json = self.get_parse(uri) return resp_json
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Gets the AS information for a given ASN. Return the CIDR and geolocation associated with the AS.
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a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L308-L314
train
opendns/pyinvestigate
investigate/investigate.py
Investigate.timeline
def timeline(self, uri): '''Get the domain tagging timeline for a given uri. Could be a domain, ip, or url. For details, see https://docs.umbrella.com/investigate-api/docs/timeline ''' uri = self._uris["timeline"].format(uri) resp_json = self.get_parse(uri) return resp_json
python
def timeline(self, uri): '''Get the domain tagging timeline for a given uri. Could be a domain, ip, or url. For details, see https://docs.umbrella.com/investigate-api/docs/timeline ''' uri = self._uris["timeline"].format(uri) resp_json = self.get_parse(uri) return resp_json
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Get the domain tagging timeline for a given uri. Could be a domain, ip, or url. For details, see https://docs.umbrella.com/investigate-api/docs/timeline
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a182e73a750f03e906d9b25842d556db8d2fd54f
https://github.com/opendns/pyinvestigate/blob/a182e73a750f03e906d9b25842d556db8d2fd54f/investigate/investigate.py#L316-L324
train
tisimst/mcerp
mcerp/umath.py
abs
def abs(x): """ Absolute value """ if isinstance(x, UncertainFunction): mcpts = np.abs(x._mcpts) return UncertainFunction(mcpts) else: return np.abs(x)
python
def abs(x): """ Absolute value """ if isinstance(x, UncertainFunction): mcpts = np.abs(x._mcpts) return UncertainFunction(mcpts) else: return np.abs(x)
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Absolute value
[ "Absolute", "value" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L18-L26
train
tisimst/mcerp
mcerp/umath.py
acos
def acos(x): """ Inverse cosine """ if isinstance(x, UncertainFunction): mcpts = np.arccos(x._mcpts) return UncertainFunction(mcpts) else: return np.arccos(x)
python
def acos(x): """ Inverse cosine """ if isinstance(x, UncertainFunction): mcpts = np.arccos(x._mcpts) return UncertainFunction(mcpts) else: return np.arccos(x)
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Inverse cosine
[ "Inverse", "cosine" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L29-L37
train
tisimst/mcerp
mcerp/umath.py
acosh
def acosh(x): """ Inverse hyperbolic cosine """ if isinstance(x, UncertainFunction): mcpts = np.arccosh(x._mcpts) return UncertainFunction(mcpts) else: return np.arccosh(x)
python
def acosh(x): """ Inverse hyperbolic cosine """ if isinstance(x, UncertainFunction): mcpts = np.arccosh(x._mcpts) return UncertainFunction(mcpts) else: return np.arccosh(x)
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Inverse hyperbolic cosine
[ "Inverse", "hyperbolic", "cosine" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L40-L48
train
tisimst/mcerp
mcerp/umath.py
asin
def asin(x): """ Inverse sine """ if isinstance(x, UncertainFunction): mcpts = np.arcsin(x._mcpts) return UncertainFunction(mcpts) else: return np.arcsin(x)
python
def asin(x): """ Inverse sine """ if isinstance(x, UncertainFunction): mcpts = np.arcsin(x._mcpts) return UncertainFunction(mcpts) else: return np.arcsin(x)
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Inverse sine
[ "Inverse", "sine" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L51-L59
train
tisimst/mcerp
mcerp/umath.py
asinh
def asinh(x): """ Inverse hyperbolic sine """ if isinstance(x, UncertainFunction): mcpts = np.arcsinh(x._mcpts) return UncertainFunction(mcpts) else: return np.arcsinh(x)
python
def asinh(x): """ Inverse hyperbolic sine """ if isinstance(x, UncertainFunction): mcpts = np.arcsinh(x._mcpts) return UncertainFunction(mcpts) else: return np.arcsinh(x)
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Inverse hyperbolic sine
[ "Inverse", "hyperbolic", "sine" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L62-L70
train
tisimst/mcerp
mcerp/umath.py
atan
def atan(x): """ Inverse tangent """ if isinstance(x, UncertainFunction): mcpts = np.arctan(x._mcpts) return UncertainFunction(mcpts) else: return np.arctan(x)
python
def atan(x): """ Inverse tangent """ if isinstance(x, UncertainFunction): mcpts = np.arctan(x._mcpts) return UncertainFunction(mcpts) else: return np.arctan(x)
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Inverse tangent
[ "Inverse", "tangent" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L73-L81
train
tisimst/mcerp
mcerp/umath.py
atanh
def atanh(x): """ Inverse hyperbolic tangent """ if isinstance(x, UncertainFunction): mcpts = np.arctanh(x._mcpts) return UncertainFunction(mcpts) else: return np.arctanh(x)
python
def atanh(x): """ Inverse hyperbolic tangent """ if isinstance(x, UncertainFunction): mcpts = np.arctanh(x._mcpts) return UncertainFunction(mcpts) else: return np.arctanh(x)
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Inverse hyperbolic tangent
[ "Inverse", "hyperbolic", "tangent" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L84-L92
train
tisimst/mcerp
mcerp/umath.py
ceil
def ceil(x): """ Ceiling function (round towards positive infinity) """ if isinstance(x, UncertainFunction): mcpts = np.ceil(x._mcpts) return UncertainFunction(mcpts) else: return np.ceil(x)
python
def ceil(x): """ Ceiling function (round towards positive infinity) """ if isinstance(x, UncertainFunction): mcpts = np.ceil(x._mcpts) return UncertainFunction(mcpts) else: return np.ceil(x)
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Ceiling function (round towards positive infinity)
[ "Ceiling", "function", "(", "round", "towards", "positive", "infinity", ")" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L95-L103
train
tisimst/mcerp
mcerp/umath.py
cos
def cos(x): """ Cosine """ if isinstance(x, UncertainFunction): mcpts = np.cos(x._mcpts) return UncertainFunction(mcpts) else: return np.cos(x)
python
def cos(x): """ Cosine """ if isinstance(x, UncertainFunction): mcpts = np.cos(x._mcpts) return UncertainFunction(mcpts) else: return np.cos(x)
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Cosine
[ "Cosine" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L106-L114
train
tisimst/mcerp
mcerp/umath.py
cosh
def cosh(x): """ Hyperbolic cosine """ if isinstance(x, UncertainFunction): mcpts = np.cosh(x._mcpts) return UncertainFunction(mcpts) else: return np.cosh(x)
python
def cosh(x): """ Hyperbolic cosine """ if isinstance(x, UncertainFunction): mcpts = np.cosh(x._mcpts) return UncertainFunction(mcpts) else: return np.cosh(x)
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Hyperbolic cosine
[ "Hyperbolic", "cosine" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L117-L125
train
tisimst/mcerp
mcerp/umath.py
degrees
def degrees(x): """ Convert radians to degrees """ if isinstance(x, UncertainFunction): mcpts = np.degrees(x._mcpts) return UncertainFunction(mcpts) else: return np.degrees(x)
python
def degrees(x): """ Convert radians to degrees """ if isinstance(x, UncertainFunction): mcpts = np.degrees(x._mcpts) return UncertainFunction(mcpts) else: return np.degrees(x)
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Convert radians to degrees
[ "Convert", "radians", "to", "degrees" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L128-L136
train
tisimst/mcerp
mcerp/umath.py
exp
def exp(x): """ Exponential function """ if isinstance(x, UncertainFunction): mcpts = np.exp(x._mcpts) return UncertainFunction(mcpts) else: return np.exp(x)
python
def exp(x): """ Exponential function """ if isinstance(x, UncertainFunction): mcpts = np.exp(x._mcpts) return UncertainFunction(mcpts) else: return np.exp(x)
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Exponential function
[ "Exponential", "function" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L139-L147
train
tisimst/mcerp
mcerp/umath.py
expm1
def expm1(x): """ Calculate exp(x) - 1 """ if isinstance(x, UncertainFunction): mcpts = np.expm1(x._mcpts) return UncertainFunction(mcpts) else: return np.expm1(x)
python
def expm1(x): """ Calculate exp(x) - 1 """ if isinstance(x, UncertainFunction): mcpts = np.expm1(x._mcpts) return UncertainFunction(mcpts) else: return np.expm1(x)
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Calculate exp(x) - 1
[ "Calculate", "exp", "(", "x", ")", "-", "1" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L150-L158
train
tisimst/mcerp
mcerp/umath.py
fabs
def fabs(x): """ Absolute value function """ if isinstance(x, UncertainFunction): mcpts = np.fabs(x._mcpts) return UncertainFunction(mcpts) else: return np.fabs(x)
python
def fabs(x): """ Absolute value function """ if isinstance(x, UncertainFunction): mcpts = np.fabs(x._mcpts) return UncertainFunction(mcpts) else: return np.fabs(x)
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Absolute value function
[ "Absolute", "value", "function" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L161-L169
train
tisimst/mcerp
mcerp/umath.py
floor
def floor(x): """ Floor function (round towards negative infinity) """ if isinstance(x, UncertainFunction): mcpts = np.floor(x._mcpts) return UncertainFunction(mcpts) else: return np.floor(x)
python
def floor(x): """ Floor function (round towards negative infinity) """ if isinstance(x, UncertainFunction): mcpts = np.floor(x._mcpts) return UncertainFunction(mcpts) else: return np.floor(x)
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Floor function (round towards negative infinity)
[ "Floor", "function", "(", "round", "towards", "negative", "infinity", ")" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L172-L180
train
tisimst/mcerp
mcerp/umath.py
hypot
def hypot(x, y): """ Calculate the hypotenuse given two "legs" of a right triangle """ if isinstance(x, UncertainFunction) or isinstance(x, UncertainFunction): ufx = to_uncertain_func(x) ufy = to_uncertain_func(y) mcpts = np.hypot(ufx._mcpts, ufy._mcpts) return UncertainFunction(mcpts) else: return np.hypot(x, y)
python
def hypot(x, y): """ Calculate the hypotenuse given two "legs" of a right triangle """ if isinstance(x, UncertainFunction) or isinstance(x, UncertainFunction): ufx = to_uncertain_func(x) ufy = to_uncertain_func(y) mcpts = np.hypot(ufx._mcpts, ufy._mcpts) return UncertainFunction(mcpts) else: return np.hypot(x, y)
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Calculate the hypotenuse given two "legs" of a right triangle
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L183-L193
train
tisimst/mcerp
mcerp/umath.py
log
def log(x): """ Natural logarithm """ if isinstance(x, UncertainFunction): mcpts = np.log(x._mcpts) return UncertainFunction(mcpts) else: return np.log(x)
python
def log(x): """ Natural logarithm """ if isinstance(x, UncertainFunction): mcpts = np.log(x._mcpts) return UncertainFunction(mcpts) else: return np.log(x)
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Natural logarithm
[ "Natural", "logarithm" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L203-L211
train
tisimst/mcerp
mcerp/umath.py
log10
def log10(x): """ Base-10 logarithm """ if isinstance(x, UncertainFunction): mcpts = np.log10(x._mcpts) return UncertainFunction(mcpts) else: return np.log10(x)
python
def log10(x): """ Base-10 logarithm """ if isinstance(x, UncertainFunction): mcpts = np.log10(x._mcpts) return UncertainFunction(mcpts) else: return np.log10(x)
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Base-10 logarithm
[ "Base", "-", "10", "logarithm" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L214-L222
train
tisimst/mcerp
mcerp/umath.py
log1p
def log1p(x): """ Natural logarithm of (1 + x) """ if isinstance(x, UncertainFunction): mcpts = np.log1p(x._mcpts) return UncertainFunction(mcpts) else: return np.log1p(x)
python
def log1p(x): """ Natural logarithm of (1 + x) """ if isinstance(x, UncertainFunction): mcpts = np.log1p(x._mcpts) return UncertainFunction(mcpts) else: return np.log1p(x)
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Natural logarithm of (1 + x)
[ "Natural", "logarithm", "of", "(", "1", "+", "x", ")" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L225-L233
train
tisimst/mcerp
mcerp/umath.py
radians
def radians(x): """ Convert degrees to radians """ if isinstance(x, UncertainFunction): mcpts = np.radians(x._mcpts) return UncertainFunction(mcpts) else: return np.radians(x)
python
def radians(x): """ Convert degrees to radians """ if isinstance(x, UncertainFunction): mcpts = np.radians(x._mcpts) return UncertainFunction(mcpts) else: return np.radians(x)
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Convert degrees to radians
[ "Convert", "degrees", "to", "radians" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L236-L244
train
tisimst/mcerp
mcerp/umath.py
sin
def sin(x): """ Sine """ if isinstance(x, UncertainFunction): mcpts = np.sin(x._mcpts) return UncertainFunction(mcpts) else: return np.sin(x)
python
def sin(x): """ Sine """ if isinstance(x, UncertainFunction): mcpts = np.sin(x._mcpts) return UncertainFunction(mcpts) else: return np.sin(x)
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Sine
[ "Sine" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L247-L255
train
tisimst/mcerp
mcerp/umath.py
sinh
def sinh(x): """ Hyperbolic sine """ if isinstance(x, UncertainFunction): mcpts = np.sinh(x._mcpts) return UncertainFunction(mcpts) else: return np.sinh(x)
python
def sinh(x): """ Hyperbolic sine """ if isinstance(x, UncertainFunction): mcpts = np.sinh(x._mcpts) return UncertainFunction(mcpts) else: return np.sinh(x)
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Hyperbolic sine
[ "Hyperbolic", "sine" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L258-L266
train
tisimst/mcerp
mcerp/umath.py
sqrt
def sqrt(x): """ Square-root function """ if isinstance(x, UncertainFunction): mcpts = np.sqrt(x._mcpts) return UncertainFunction(mcpts) else: return np.sqrt(x)
python
def sqrt(x): """ Square-root function """ if isinstance(x, UncertainFunction): mcpts = np.sqrt(x._mcpts) return UncertainFunction(mcpts) else: return np.sqrt(x)
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Square-root function
[ "Square", "-", "root", "function" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L269-L277
train
tisimst/mcerp
mcerp/umath.py
tan
def tan(x): """ Tangent """ if isinstance(x, UncertainFunction): mcpts = np.tan(x._mcpts) return UncertainFunction(mcpts) else: return np.tan(x)
python
def tan(x): """ Tangent """ if isinstance(x, UncertainFunction): mcpts = np.tan(x._mcpts) return UncertainFunction(mcpts) else: return np.tan(x)
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Tangent
[ "Tangent" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L280-L288
train
tisimst/mcerp
mcerp/umath.py
tanh
def tanh(x): """ Hyperbolic tangent """ if isinstance(x, UncertainFunction): mcpts = np.tanh(x._mcpts) return UncertainFunction(mcpts) else: return np.tanh(x)
python
def tanh(x): """ Hyperbolic tangent """ if isinstance(x, UncertainFunction): mcpts = np.tanh(x._mcpts) return UncertainFunction(mcpts) else: return np.tanh(x)
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Hyperbolic tangent
[ "Hyperbolic", "tangent" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L291-L299
train
tisimst/mcerp
mcerp/umath.py
trunc
def trunc(x): """ Truncate the values to the integer value without rounding """ if isinstance(x, UncertainFunction): mcpts = np.trunc(x._mcpts) return UncertainFunction(mcpts) else: return np.trunc(x)
python
def trunc(x): """ Truncate the values to the integer value without rounding """ if isinstance(x, UncertainFunction): mcpts = np.trunc(x._mcpts) return UncertainFunction(mcpts) else: return np.trunc(x)
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Truncate the values to the integer value without rounding
[ "Truncate", "the", "values", "to", "the", "integer", "value", "without", "rounding" ]
2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/umath.py#L302-L310
train
tisimst/mcerp
mcerp/lhd.py
lhd
def lhd( dist=None, size=None, dims=1, form="randomized", iterations=100, showcorrelations=False, ): """ Create a Latin-Hypercube sample design based on distributions defined in the `scipy.stats` module Parameters ---------- dist: array_like frozen scipy.stats.rv_continuous or rv_discrete distribution objects that are defined previous to calling LHD size: int integer value for the number of samples to generate for each distribution object dims: int, optional if dist is a single distribution object, and dims > 1, the one distribution will be used to generate a size-by-dims sampled design form: str, optional (non-functional at the moment) determines how the sampling is to occur, with the following optional values: - 'randomized' - completely randomized sampling - 'spacefilling' - space-filling sampling (generally gives a more accurate sampling of the design when the number of sample points is small) - 'orthogonal' - balanced space-filling sampling (experimental) The 'spacefilling' and 'orthogonal' forms require some iterations to determine the optimal sampling pattern. iterations: int, optional (non-functional at the moment) used to control the number of allowable search iterations for generating 'spacefilling' and 'orthogonal' designs Returns ------- out: 2d-array, A 2d-array where each column corresponds to each input distribution and each row is a sample in the design Examples -------- Single distribution: - uniform distribution, low = -1, width = 2 >>> import scipy.stats as ss >>> d0 = ss.uniform(loc=-1,scale=2) >>> print lhd(dist=d0,size=5) [[ 0.51031081] [-0.28961427] [-0.68342107] [ 0.69784371] [ 0.12248842]] Single distribution for multiple variables: - normal distribution, mean = 0, stdev = 1 >>> d1 = ss.norm(loc=0,scale=1) >>> print lhd(dist=d1,size=7,dims=5) [[-0.8612785 0.23034412 0.21808001] [ 0.0455778 0.07001606 0.31586419] [-0.978553 0.30394663 0.78483995] [-0.26415983 0.15235896 0.51462024] [ 0.80805686 0.38891031 0.02076505] [ 1.63028931 0.52104917 1.48016008]] Multiple distributions: - beta distribution, alpha = 2, beta = 5 - exponential distribution, lambda = 1.5 >>> d2 = ss.beta(2,5) >>> d3 = ss.expon(scale=1/1.5) >>> print lhd(dist=(d1,d2,d3),size=6) [[-0.8612785 0.23034412 0.21808001] [ 0.0455778 0.07001606 0.31586419] [-0.978553 0.30394663 0.78483995] [-0.26415983 0.15235896 0.51462024] [ 0.80805686 0.38891031 0.02076505] [ 1.63028931 0.52104917 1.48016008]] """ assert dims > 0, 'kwarg "dims" must be at least 1' if not size or not dist: return None def _lhs(x, samples=20): """ _lhs(x) returns a latin-hypercube matrix (each row is a different set of sample inputs) using a default sample size of 20 for each column of X. X must be a 2xN matrix that contains the lower and upper bounds of each column. The lower bound(s) should be in the first row and the upper bound(s) should be in the second row. _lhs(x,samples=N) uses the sample size of N instead of the default (20). Example: >>> x = np.array([[0,-1,3],[1,2,6]]) >>> print 'x:'; print x x: [[ 0 -1 3] [ 1 2 6]] >>> print 'lhs(x):'; print _lhs(x) lhs(x): [[ 0.02989122 -0.93918734 3.14432618] [ 0.08869833 -0.82140706 3.19875152] [ 0.10627442 -0.66999234 3.33814979] [ 0.15202861 -0.44157763 3.57036894] [ 0.2067089 -0.34845384 3.66930908] [ 0.26542056 -0.23706445 3.76361414] [ 0.34201421 -0.00779306 3.90818257] [ 0.37891646 0.15458423 4.15031708] [ 0.43501575 0.23561118 4.20320064] [ 0.4865449 0.36350601 4.45792314] [ 0.54804367 0.56069855 4.60911539] [ 0.59400712 0.7468415 4.69923486] [ 0.63708876 0.9159176 4.83611204] [ 0.68819855 0.98596354 4.97659182] [ 0.7368695 1.18923511 5.11135111] [ 0.78885724 1.28369441 5.2900157 ] [ 0.80966513 1.47415703 5.4081971 ] [ 0.86196731 1.57844205 5.61067689] [ 0.94784517 1.71823504 5.78021164] [ 0.96739728 1.94169017 5.88604772]] >>> print 'lhs(x,samples=5):'; print _lhs(x,samples=5) lhs(x,samples=5): [[ 0.1949127 -0.54124725 3.49238369] [ 0.21128576 -0.13439798 3.65652016] [ 0.47516308 0.39957406 4.5797308 ] [ 0.64400392 0.90890999 4.92379431] [ 0.96279472 1.79415307 5.52028238]] """ # determine the segment size segmentSize = 1.0 / samples # get the number of dimensions to sample (number of columns) numVars = x.shape[1] # populate each dimension out = np.zeros((samples, numVars)) pointValue = np.zeros(samples) for n in range(numVars): for i in range(samples): segmentMin = i * segmentSize point = segmentMin + (np.random.random() * segmentSize) pointValue[i] = (point * (x[1, n] - x[0, n])) + x[0, n] out[:, n] = pointValue # now randomly arrange the different segments return _mix(out) def _mix(data, dim="cols"): """ Takes a data matrix and mixes up the values along dim (either "rows" or "cols"). In other words, if dim='rows', then each row's data is mixed ONLY WITHIN ITSELF. Likewise, if dim='cols', then each column's data is mixed ONLY WITHIN ITSELF. """ data = np.atleast_2d(data) n = data.shape[0] if dim == "rows": data = data.T data_rank = list(range(n)) for i in range(data.shape[1]): new_data_rank = np.random.permutation(data_rank) vals, order = np.unique( np.hstack((data_rank, new_data_rank)), return_inverse=True ) old_order = order[:n] new_order = order[-n:] tmp = data[np.argsort(old_order), i][new_order] data[:, i] = tmp[:] if dim == "rows": data = data.T return data if form is "randomized": if hasattr(dist, "__getitem__"): # if multiple distributions were input nvars = len(dist) x = np.vstack((np.zeros(nvars), np.ones(nvars))) unif_data = _lhs(x, samples=size) dist_data = np.empty_like(unif_data) for i, d in enumerate(dist): dist_data[:, i] = d.ppf(unif_data[:, i]) else: # if a single distribution was input nvars = dims x = np.vstack((np.zeros(nvars), np.ones(nvars))) unif_data = _lhs(x, samples=size) dist_data = np.empty_like(unif_data) for i in range(nvars): dist_data[:, i] = dist.ppf(unif_data[:, i]) elif form is "spacefilling": def euclid_distance(arr): n = arr.shape[0] ans = 0.0 for i in range(n - 1): for j in range(i + 1, n): d = np.sqrt( np.sum( [(arr[i, k] - arr[j, k]) ** 2 for k in range(arr.shape[1])] ) ) ans += 1.0 / d ** 2 return ans def fill_space(data): best = 1e8 for it in range(iterations): d = euclid_distance(data) if d < best: d_opt = d data_opt = data.copy() data = _mix(data) print("Optimized Distance:", d_opt) return data_opt if hasattr(dist, "__getitem__"): # if multiple distributions were input nvars = len(dist) x = np.vstack((np.zeros(nvars), np.ones(nvars))) unif_data = fill_space(_lhs(x, samples=size)) dist_data = np.empty_like(unif_data) for i, d in enumerate(dist): dist_data[:, i] = d.ppf(unif_data[:, i]) else: # if a single distribution was input nvars = dims x = np.vstack((np.zeros(nvars), np.ones(nvars))) unif_data = fill_space(_lhs(x, samples=size)) dist_data = np.empty_like(unif_data) for i in range(nvars): dist_data[:, i] = dist.ppf(unif_data[:, i]) elif form is "orthogonal": raise NotImplementedError( "Sorry. The orthogonal space-filling algorithm hasn't been implemented yet." ) else: raise ValueError('Invalid "form" value: %s' % (form)) if dist_data.shape[1] > 1: cor_matrix = np.zeros((nvars, nvars)) for i in range(nvars): for j in range(nvars): x_data = dist_data[:, i].copy() y_data = dist_data[:, j].copy() x_mean = x_data.mean() y_mean = y_data.mean() num = np.sum((x_data - x_mean) * (y_data - y_mean)) den = np.sqrt( np.sum((x_data - x_mean) ** 2) * np.sum((y_data - y_mean) ** 2) ) cor_matrix[i, j] = num / den cor_matrix[j, i] = num / den inv_cor_matrix = np.linalg.pinv(cor_matrix) VIF = np.max(np.diag(inv_cor_matrix)) if showcorrelations: print("Correlation Matrix:\n", cor_matrix) print("Inverted Correlation Matrix:\n", inv_cor_matrix) print("Variance Inflation Factor (VIF):", VIF) return dist_data
python
def lhd( dist=None, size=None, dims=1, form="randomized", iterations=100, showcorrelations=False, ): """ Create a Latin-Hypercube sample design based on distributions defined in the `scipy.stats` module Parameters ---------- dist: array_like frozen scipy.stats.rv_continuous or rv_discrete distribution objects that are defined previous to calling LHD size: int integer value for the number of samples to generate for each distribution object dims: int, optional if dist is a single distribution object, and dims > 1, the one distribution will be used to generate a size-by-dims sampled design form: str, optional (non-functional at the moment) determines how the sampling is to occur, with the following optional values: - 'randomized' - completely randomized sampling - 'spacefilling' - space-filling sampling (generally gives a more accurate sampling of the design when the number of sample points is small) - 'orthogonal' - balanced space-filling sampling (experimental) The 'spacefilling' and 'orthogonal' forms require some iterations to determine the optimal sampling pattern. iterations: int, optional (non-functional at the moment) used to control the number of allowable search iterations for generating 'spacefilling' and 'orthogonal' designs Returns ------- out: 2d-array, A 2d-array where each column corresponds to each input distribution and each row is a sample in the design Examples -------- Single distribution: - uniform distribution, low = -1, width = 2 >>> import scipy.stats as ss >>> d0 = ss.uniform(loc=-1,scale=2) >>> print lhd(dist=d0,size=5) [[ 0.51031081] [-0.28961427] [-0.68342107] [ 0.69784371] [ 0.12248842]] Single distribution for multiple variables: - normal distribution, mean = 0, stdev = 1 >>> d1 = ss.norm(loc=0,scale=1) >>> print lhd(dist=d1,size=7,dims=5) [[-0.8612785 0.23034412 0.21808001] [ 0.0455778 0.07001606 0.31586419] [-0.978553 0.30394663 0.78483995] [-0.26415983 0.15235896 0.51462024] [ 0.80805686 0.38891031 0.02076505] [ 1.63028931 0.52104917 1.48016008]] Multiple distributions: - beta distribution, alpha = 2, beta = 5 - exponential distribution, lambda = 1.5 >>> d2 = ss.beta(2,5) >>> d3 = ss.expon(scale=1/1.5) >>> print lhd(dist=(d1,d2,d3),size=6) [[-0.8612785 0.23034412 0.21808001] [ 0.0455778 0.07001606 0.31586419] [-0.978553 0.30394663 0.78483995] [-0.26415983 0.15235896 0.51462024] [ 0.80805686 0.38891031 0.02076505] [ 1.63028931 0.52104917 1.48016008]] """ assert dims > 0, 'kwarg "dims" must be at least 1' if not size or not dist: return None def _lhs(x, samples=20): """ _lhs(x) returns a latin-hypercube matrix (each row is a different set of sample inputs) using a default sample size of 20 for each column of X. X must be a 2xN matrix that contains the lower and upper bounds of each column. The lower bound(s) should be in the first row and the upper bound(s) should be in the second row. _lhs(x,samples=N) uses the sample size of N instead of the default (20). Example: >>> x = np.array([[0,-1,3],[1,2,6]]) >>> print 'x:'; print x x: [[ 0 -1 3] [ 1 2 6]] >>> print 'lhs(x):'; print _lhs(x) lhs(x): [[ 0.02989122 -0.93918734 3.14432618] [ 0.08869833 -0.82140706 3.19875152] [ 0.10627442 -0.66999234 3.33814979] [ 0.15202861 -0.44157763 3.57036894] [ 0.2067089 -0.34845384 3.66930908] [ 0.26542056 -0.23706445 3.76361414] [ 0.34201421 -0.00779306 3.90818257] [ 0.37891646 0.15458423 4.15031708] [ 0.43501575 0.23561118 4.20320064] [ 0.4865449 0.36350601 4.45792314] [ 0.54804367 0.56069855 4.60911539] [ 0.59400712 0.7468415 4.69923486] [ 0.63708876 0.9159176 4.83611204] [ 0.68819855 0.98596354 4.97659182] [ 0.7368695 1.18923511 5.11135111] [ 0.78885724 1.28369441 5.2900157 ] [ 0.80966513 1.47415703 5.4081971 ] [ 0.86196731 1.57844205 5.61067689] [ 0.94784517 1.71823504 5.78021164] [ 0.96739728 1.94169017 5.88604772]] >>> print 'lhs(x,samples=5):'; print _lhs(x,samples=5) lhs(x,samples=5): [[ 0.1949127 -0.54124725 3.49238369] [ 0.21128576 -0.13439798 3.65652016] [ 0.47516308 0.39957406 4.5797308 ] [ 0.64400392 0.90890999 4.92379431] [ 0.96279472 1.79415307 5.52028238]] """ # determine the segment size segmentSize = 1.0 / samples # get the number of dimensions to sample (number of columns) numVars = x.shape[1] # populate each dimension out = np.zeros((samples, numVars)) pointValue = np.zeros(samples) for n in range(numVars): for i in range(samples): segmentMin = i * segmentSize point = segmentMin + (np.random.random() * segmentSize) pointValue[i] = (point * (x[1, n] - x[0, n])) + x[0, n] out[:, n] = pointValue # now randomly arrange the different segments return _mix(out) def _mix(data, dim="cols"): """ Takes a data matrix and mixes up the values along dim (either "rows" or "cols"). In other words, if dim='rows', then each row's data is mixed ONLY WITHIN ITSELF. Likewise, if dim='cols', then each column's data is mixed ONLY WITHIN ITSELF. """ data = np.atleast_2d(data) n = data.shape[0] if dim == "rows": data = data.T data_rank = list(range(n)) for i in range(data.shape[1]): new_data_rank = np.random.permutation(data_rank) vals, order = np.unique( np.hstack((data_rank, new_data_rank)), return_inverse=True ) old_order = order[:n] new_order = order[-n:] tmp = data[np.argsort(old_order), i][new_order] data[:, i] = tmp[:] if dim == "rows": data = data.T return data if form is "randomized": if hasattr(dist, "__getitem__"): # if multiple distributions were input nvars = len(dist) x = np.vstack((np.zeros(nvars), np.ones(nvars))) unif_data = _lhs(x, samples=size) dist_data = np.empty_like(unif_data) for i, d in enumerate(dist): dist_data[:, i] = d.ppf(unif_data[:, i]) else: # if a single distribution was input nvars = dims x = np.vstack((np.zeros(nvars), np.ones(nvars))) unif_data = _lhs(x, samples=size) dist_data = np.empty_like(unif_data) for i in range(nvars): dist_data[:, i] = dist.ppf(unif_data[:, i]) elif form is "spacefilling": def euclid_distance(arr): n = arr.shape[0] ans = 0.0 for i in range(n - 1): for j in range(i + 1, n): d = np.sqrt( np.sum( [(arr[i, k] - arr[j, k]) ** 2 for k in range(arr.shape[1])] ) ) ans += 1.0 / d ** 2 return ans def fill_space(data): best = 1e8 for it in range(iterations): d = euclid_distance(data) if d < best: d_opt = d data_opt = data.copy() data = _mix(data) print("Optimized Distance:", d_opt) return data_opt if hasattr(dist, "__getitem__"): # if multiple distributions were input nvars = len(dist) x = np.vstack((np.zeros(nvars), np.ones(nvars))) unif_data = fill_space(_lhs(x, samples=size)) dist_data = np.empty_like(unif_data) for i, d in enumerate(dist): dist_data[:, i] = d.ppf(unif_data[:, i]) else: # if a single distribution was input nvars = dims x = np.vstack((np.zeros(nvars), np.ones(nvars))) unif_data = fill_space(_lhs(x, samples=size)) dist_data = np.empty_like(unif_data) for i in range(nvars): dist_data[:, i] = dist.ppf(unif_data[:, i]) elif form is "orthogonal": raise NotImplementedError( "Sorry. The orthogonal space-filling algorithm hasn't been implemented yet." ) else: raise ValueError('Invalid "form" value: %s' % (form)) if dist_data.shape[1] > 1: cor_matrix = np.zeros((nvars, nvars)) for i in range(nvars): for j in range(nvars): x_data = dist_data[:, i].copy() y_data = dist_data[:, j].copy() x_mean = x_data.mean() y_mean = y_data.mean() num = np.sum((x_data - x_mean) * (y_data - y_mean)) den = np.sqrt( np.sum((x_data - x_mean) ** 2) * np.sum((y_data - y_mean) ** 2) ) cor_matrix[i, j] = num / den cor_matrix[j, i] = num / den inv_cor_matrix = np.linalg.pinv(cor_matrix) VIF = np.max(np.diag(inv_cor_matrix)) if showcorrelations: print("Correlation Matrix:\n", cor_matrix) print("Inverted Correlation Matrix:\n", inv_cor_matrix) print("Variance Inflation Factor (VIF):", VIF) return dist_data
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The lower bound(s) should be in the first row and the upper\n bound(s) should be in the second row.\n \n _lhs(x,samples=N) uses the sample size of N instead of the default (20).\n \n Example:\n >>> x = np.array([[0,-1,3],[1,2,6]])\n >>> print 'x:'; print x\n x:\n [[ 0 -1 3]\n [ 1 2 6]]\n\n >>> print 'lhs(x):'; print _lhs(x)\n lhs(x):\n [[ 0.02989122 -0.93918734 3.14432618]\n [ 0.08869833 -0.82140706 3.19875152]\n [ 0.10627442 -0.66999234 3.33814979]\n [ 0.15202861 -0.44157763 3.57036894]\n [ 0.2067089 -0.34845384 3.66930908]\n [ 0.26542056 -0.23706445 3.76361414]\n [ 0.34201421 -0.00779306 3.90818257]\n [ 0.37891646 0.15458423 4.15031708]\n [ 0.43501575 0.23561118 4.20320064]\n [ 0.4865449 0.36350601 4.45792314]\n [ 0.54804367 0.56069855 4.60911539]\n [ 0.59400712 0.7468415 4.69923486]\n [ 0.63708876 0.9159176 4.83611204]\n [ 0.68819855 0.98596354 4.97659182]\n [ 0.7368695 1.18923511 5.11135111]\n [ 0.78885724 1.28369441 5.2900157 ]\n [ 0.80966513 1.47415703 5.4081971 ]\n [ 0.86196731 1.57844205 5.61067689]\n [ 0.94784517 1.71823504 5.78021164]\n [ 0.96739728 1.94169017 5.88604772]]\n\n >>> print 'lhs(x,samples=5):'; print _lhs(x,samples=5)\n lhs(x,samples=5):\n [[ 0.1949127 -0.54124725 3.49238369]\n [ 0.21128576 -0.13439798 3.65652016]\n [ 0.47516308 0.39957406 4.5797308 ]\n [ 0.64400392 0.90890999 4.92379431]\n [ 0.96279472 1.79415307 5.52028238]] \n \"\"\"", "# determine the segment size", "segmentSize", "=", "1.0", "/", "samples", "# get the number of dimensions to sample (number of columns)", "numVars", "=", "x", ".", "shape", "[", "1", "]", "# populate each dimension", "out", "=", "np", ".", "zeros", "(", "(", "samples", ",", "numVars", ")", ")", "pointValue", "=", "np", ".", "zeros", "(", "samples", ")", "for", "n", "in", "range", "(", "numVars", ")", ":", "for", "i", "in", "range", "(", "samples", ")", ":", "segmentMin", "=", "i", "*", "segmentSize", "point", "=", "segmentMin", "+", "(", "np", ".", "random", ".", "random", "(", ")", "*", "segmentSize", ")", "pointValue", "[", "i", "]", "=", "(", "point", "*", "(", "x", "[", "1", ",", "n", "]", "-", "x", "[", "0", ",", "n", "]", ")", ")", "+", "x", "[", "0", ",", "n", "]", "out", "[", ":", ",", "n", "]", "=", "pointValue", "# now randomly arrange the different segments", "return", "_mix", "(", "out", ")", "def", "_mix", "(", "data", ",", "dim", "=", "\"cols\"", ")", ":", "\"\"\"\n Takes a data matrix and mixes up the values along dim (either \"rows\" or \n \"cols\"). 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Create a Latin-Hypercube sample design based on distributions defined in the `scipy.stats` module Parameters ---------- dist: array_like frozen scipy.stats.rv_continuous or rv_discrete distribution objects that are defined previous to calling LHD size: int integer value for the number of samples to generate for each distribution object dims: int, optional if dist is a single distribution object, and dims > 1, the one distribution will be used to generate a size-by-dims sampled design form: str, optional (non-functional at the moment) determines how the sampling is to occur, with the following optional values: - 'randomized' - completely randomized sampling - 'spacefilling' - space-filling sampling (generally gives a more accurate sampling of the design when the number of sample points is small) - 'orthogonal' - balanced space-filling sampling (experimental) The 'spacefilling' and 'orthogonal' forms require some iterations to determine the optimal sampling pattern. iterations: int, optional (non-functional at the moment) used to control the number of allowable search iterations for generating 'spacefilling' and 'orthogonal' designs Returns ------- out: 2d-array, A 2d-array where each column corresponds to each input distribution and each row is a sample in the design Examples -------- Single distribution: - uniform distribution, low = -1, width = 2 >>> import scipy.stats as ss >>> d0 = ss.uniform(loc=-1,scale=2) >>> print lhd(dist=d0,size=5) [[ 0.51031081] [-0.28961427] [-0.68342107] [ 0.69784371] [ 0.12248842]] Single distribution for multiple variables: - normal distribution, mean = 0, stdev = 1 >>> d1 = ss.norm(loc=0,scale=1) >>> print lhd(dist=d1,size=7,dims=5) [[-0.8612785 0.23034412 0.21808001] [ 0.0455778 0.07001606 0.31586419] [-0.978553 0.30394663 0.78483995] [-0.26415983 0.15235896 0.51462024] [ 0.80805686 0.38891031 0.02076505] [ 1.63028931 0.52104917 1.48016008]] Multiple distributions: - beta distribution, alpha = 2, beta = 5 - exponential distribution, lambda = 1.5 >>> d2 = ss.beta(2,5) >>> d3 = ss.expon(scale=1/1.5) >>> print lhd(dist=(d1,d2,d3),size=6) [[-0.8612785 0.23034412 0.21808001] [ 0.0455778 0.07001606 0.31586419] [-0.978553 0.30394663 0.78483995] [-0.26415983 0.15235896 0.51462024] [ 0.80805686 0.38891031 0.02076505] [ 1.63028931 0.52104917 1.48016008]]
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/lhd.py#L5-L286
train
tisimst/mcerp
mcerp/__init__.py
to_uncertain_func
def to_uncertain_func(x): """ Transforms x into an UncertainFunction-compatible object, unless it is already an UncertainFunction (in which case x is returned unchanged). Raises an exception unless 'x' belongs to some specific classes of objects that are known not to depend on UncertainFunction objects (which then cannot be considered as constants). """ if isinstance(x, UncertainFunction): return x # ! In Python 2.6+, numbers.Number could be used instead, here: elif isinstance(x, CONSTANT_TYPES): # No variable => no derivative to define: return UncertainFunction([x] * npts) raise NotUpcast("%s cannot be converted to a number with" " uncertainty" % type(x))
python
def to_uncertain_func(x): """ Transforms x into an UncertainFunction-compatible object, unless it is already an UncertainFunction (in which case x is returned unchanged). Raises an exception unless 'x' belongs to some specific classes of objects that are known not to depend on UncertainFunction objects (which then cannot be considered as constants). """ if isinstance(x, UncertainFunction): return x # ! In Python 2.6+, numbers.Number could be used instead, here: elif isinstance(x, CONSTANT_TYPES): # No variable => no derivative to define: return UncertainFunction([x] * npts) raise NotUpcast("%s cannot be converted to a number with" " uncertainty" % type(x))
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Transforms x into an UncertainFunction-compatible object, unless it is already an UncertainFunction (in which case x is returned unchanged). Raises an exception unless 'x' belongs to some specific classes of objects that are known not to depend on UncertainFunction objects (which then cannot be considered as constants).
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L31-L49
train
tisimst/mcerp
mcerp/__init__.py
Beta
def Beta(alpha, beta, low=0, high=1, tag=None): """ A Beta random variate Parameters ---------- alpha : scalar The first shape parameter beta : scalar The second shape parameter Optional -------- low : scalar Lower bound of the distribution support (default=0) high : scalar Upper bound of the distribution support (default=1) """ assert ( alpha > 0 and beta > 0 ), 'Beta "alpha" and "beta" parameters must be greater than zero' assert low < high, 'Beta "low" must be less than "high"' return uv(ss.beta(alpha, beta, loc=low, scale=high - low), tag=tag)
python
def Beta(alpha, beta, low=0, high=1, tag=None): """ A Beta random variate Parameters ---------- alpha : scalar The first shape parameter beta : scalar The second shape parameter Optional -------- low : scalar Lower bound of the distribution support (default=0) high : scalar Upper bound of the distribution support (default=1) """ assert ( alpha > 0 and beta > 0 ), 'Beta "alpha" and "beta" parameters must be greater than zero' assert low < high, 'Beta "low" must be less than "high"' return uv(ss.beta(alpha, beta, loc=low, scale=high - low), tag=tag)
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A Beta random variate Parameters ---------- alpha : scalar The first shape parameter beta : scalar The second shape parameter Optional -------- low : scalar Lower bound of the distribution support (default=0) high : scalar Upper bound of the distribution support (default=1)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L721-L743
train
tisimst/mcerp
mcerp/__init__.py
BetaPrime
def BetaPrime(alpha, beta, tag=None): """ A BetaPrime random variate Parameters ---------- alpha : scalar The first shape parameter beta : scalar The second shape parameter """ assert ( alpha > 0 and beta > 0 ), 'BetaPrime "alpha" and "beta" parameters must be greater than zero' x = Beta(alpha, beta, tag) return x / (1 - x)
python
def BetaPrime(alpha, beta, tag=None): """ A BetaPrime random variate Parameters ---------- alpha : scalar The first shape parameter beta : scalar The second shape parameter """ assert ( alpha > 0 and beta > 0 ), 'BetaPrime "alpha" and "beta" parameters must be greater than zero' x = Beta(alpha, beta, tag) return x / (1 - x)
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A BetaPrime random variate Parameters ---------- alpha : scalar The first shape parameter beta : scalar The second shape parameter
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L746-L762
train
tisimst/mcerp
mcerp/__init__.py
Bradford
def Bradford(q, low=0, high=1, tag=None): """ A Bradford random variate Parameters ---------- q : scalar The shape parameter low : scalar The lower bound of the distribution (default=0) high : scalar The upper bound of the distribution (default=1) """ assert q > 0, 'Bradford "q" parameter must be greater than zero' assert low < high, 'Bradford "low" parameter must be less than "high"' return uv(ss.bradford(q, loc=low, scale=high - low), tag=tag)
python
def Bradford(q, low=0, high=1, tag=None): """ A Bradford random variate Parameters ---------- q : scalar The shape parameter low : scalar The lower bound of the distribution (default=0) high : scalar The upper bound of the distribution (default=1) """ assert q > 0, 'Bradford "q" parameter must be greater than zero' assert low < high, 'Bradford "low" parameter must be less than "high"' return uv(ss.bradford(q, loc=low, scale=high - low), tag=tag)
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A Bradford random variate Parameters ---------- q : scalar The shape parameter low : scalar The lower bound of the distribution (default=0) high : scalar The upper bound of the distribution (default=1)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L765-L780
train
tisimst/mcerp
mcerp/__init__.py
Burr
def Burr(c, k, tag=None): """ A Burr random variate Parameters ---------- c : scalar The first shape parameter k : scalar The second shape parameter """ assert c > 0 and k > 0, 'Burr "c" and "k" parameters must be greater than zero' return uv(ss.burr(c, k), tag=tag)
python
def Burr(c, k, tag=None): """ A Burr random variate Parameters ---------- c : scalar The first shape parameter k : scalar The second shape parameter """ assert c > 0 and k > 0, 'Burr "c" and "k" parameters must be greater than zero' return uv(ss.burr(c, k), tag=tag)
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A Burr random variate Parameters ---------- c : scalar The first shape parameter k : scalar The second shape parameter
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L783-L796
train
tisimst/mcerp
mcerp/__init__.py
ChiSquared
def ChiSquared(k, tag=None): """ A Chi-Squared random variate Parameters ---------- k : int The degrees of freedom of the distribution (must be greater than one) """ assert int(k) == k and k >= 1, 'Chi-Squared "k" must be an integer greater than 0' return uv(ss.chi2(k), tag=tag)
python
def ChiSquared(k, tag=None): """ A Chi-Squared random variate Parameters ---------- k : int The degrees of freedom of the distribution (must be greater than one) """ assert int(k) == k and k >= 1, 'Chi-Squared "k" must be an integer greater than 0' return uv(ss.chi2(k), tag=tag)
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A Chi-Squared random variate Parameters ---------- k : int The degrees of freedom of the distribution (must be greater than one)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L799-L809
train
tisimst/mcerp
mcerp/__init__.py
Erlang
def Erlang(k, lamda, tag=None): """ An Erlang random variate. This distribution is the same as a Gamma(k, theta) distribution, but with the restriction that k must be a positive integer. This is provided for greater compatibility with other simulation tools, but provides no advantage over the Gamma distribution in its applications. Parameters ---------- k : int The shape parameter (must be a positive integer) lamda : scalar The scale parameter (must be greater than zero) """ assert int(k) == k and k > 0, 'Erlang "k" must be a positive integer' assert lamda > 0, 'Erlang "lamda" must be greater than zero' return Gamma(k, lamda, tag)
python
def Erlang(k, lamda, tag=None): """ An Erlang random variate. This distribution is the same as a Gamma(k, theta) distribution, but with the restriction that k must be a positive integer. This is provided for greater compatibility with other simulation tools, but provides no advantage over the Gamma distribution in its applications. Parameters ---------- k : int The shape parameter (must be a positive integer) lamda : scalar The scale parameter (must be greater than zero) """ assert int(k) == k and k > 0, 'Erlang "k" must be a positive integer' assert lamda > 0, 'Erlang "lamda" must be greater than zero' return Gamma(k, lamda, tag)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L832-L850
train
tisimst/mcerp
mcerp/__init__.py
Exponential
def Exponential(lamda, tag=None): """ An Exponential random variate Parameters ---------- lamda : scalar The inverse scale (as shown on Wikipedia). (FYI: mu = 1/lamda.) """ assert lamda > 0, 'Exponential "lamda" must be greater than zero' return uv(ss.expon(scale=1.0 / lamda), tag=tag)
python
def Exponential(lamda, tag=None): """ An Exponential random variate Parameters ---------- lamda : scalar The inverse scale (as shown on Wikipedia). (FYI: mu = 1/lamda.) """ assert lamda > 0, 'Exponential "lamda" must be greater than zero' return uv(ss.expon(scale=1.0 / lamda), tag=tag)
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An Exponential random variate Parameters ---------- lamda : scalar The inverse scale (as shown on Wikipedia). (FYI: mu = 1/lamda.)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L853-L863
train
tisimst/mcerp
mcerp/__init__.py
ExtValueMax
def ExtValueMax(mu, sigma, tag=None): """ An Extreme Value Maximum random variate. Parameters ---------- mu : scalar The location parameter sigma : scalar The scale parameter (must be greater than zero) """ assert sigma > 0, 'ExtremeValueMax "sigma" must be greater than zero' p = U(0, 1)._mcpts[:] return UncertainFunction(mu - sigma * np.log(-np.log(p)), tag=tag)
python
def ExtValueMax(mu, sigma, tag=None): """ An Extreme Value Maximum random variate. Parameters ---------- mu : scalar The location parameter sigma : scalar The scale parameter (must be greater than zero) """ assert sigma > 0, 'ExtremeValueMax "sigma" must be greater than zero' p = U(0, 1)._mcpts[:] return UncertainFunction(mu - sigma * np.log(-np.log(p)), tag=tag)
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An Extreme Value Maximum random variate. Parameters ---------- mu : scalar The location parameter sigma : scalar The scale parameter (must be greater than zero)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L869-L882
train
tisimst/mcerp
mcerp/__init__.py
Fisher
def Fisher(d1, d2, tag=None): """ An F (fisher) random variate Parameters ---------- d1 : int Numerator degrees of freedom d2 : int Denominator degrees of freedom """ assert ( int(d1) == d1 and d1 >= 1 ), 'Fisher (F) "d1" must be an integer greater than 0' assert ( int(d2) == d2 and d2 >= 1 ), 'Fisher (F) "d2" must be an integer greater than 0' return uv(ss.f(d1, d2), tag=tag)
python
def Fisher(d1, d2, tag=None): """ An F (fisher) random variate Parameters ---------- d1 : int Numerator degrees of freedom d2 : int Denominator degrees of freedom """ assert ( int(d1) == d1 and d1 >= 1 ), 'Fisher (F) "d1" must be an integer greater than 0' assert ( int(d2) == d2 and d2 >= 1 ), 'Fisher (F) "d2" must be an integer greater than 0' return uv(ss.f(d1, d2), tag=tag)
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An F (fisher) random variate Parameters ---------- d1 : int Numerator degrees of freedom d2 : int Denominator degrees of freedom
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L907-L924
train
tisimst/mcerp
mcerp/__init__.py
Gamma
def Gamma(k, theta, tag=None): """ A Gamma random variate Parameters ---------- k : scalar The shape parameter (must be positive and non-zero) theta : scalar The scale parameter (must be positive and non-zero) """ assert ( k > 0 and theta > 0 ), 'Gamma "k" and "theta" parameters must be greater than zero' return uv(ss.gamma(k, scale=theta), tag=tag)
python
def Gamma(k, theta, tag=None): """ A Gamma random variate Parameters ---------- k : scalar The shape parameter (must be positive and non-zero) theta : scalar The scale parameter (must be positive and non-zero) """ assert ( k > 0 and theta > 0 ), 'Gamma "k" and "theta" parameters must be greater than zero' return uv(ss.gamma(k, scale=theta), tag=tag)
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A Gamma random variate Parameters ---------- k : scalar The shape parameter (must be positive and non-zero) theta : scalar The scale parameter (must be positive and non-zero)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L930-L944
train
tisimst/mcerp
mcerp/__init__.py
LogNormal
def LogNormal(mu, sigma, tag=None): """ A Log-Normal random variate Parameters ---------- mu : scalar The location parameter sigma : scalar The scale parameter (must be positive and non-zero) """ assert sigma > 0, 'Log-Normal "sigma" must be positive' return uv(ss.lognorm(sigma, loc=mu), tag=tag)
python
def LogNormal(mu, sigma, tag=None): """ A Log-Normal random variate Parameters ---------- mu : scalar The location parameter sigma : scalar The scale parameter (must be positive and non-zero) """ assert sigma > 0, 'Log-Normal "sigma" must be positive' return uv(ss.lognorm(sigma, loc=mu), tag=tag)
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A Log-Normal random variate Parameters ---------- mu : scalar The location parameter sigma : scalar The scale parameter (must be positive and non-zero)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L947-L959
train
tisimst/mcerp
mcerp/__init__.py
Normal
def Normal(mu, sigma, tag=None): """ A Normal (or Gaussian) random variate Parameters ---------- mu : scalar The mean value of the distribution sigma : scalar The standard deviation (must be positive and non-zero) """ assert sigma > 0, 'Normal "sigma" must be greater than zero' return uv(ss.norm(loc=mu, scale=sigma), tag=tag)
python
def Normal(mu, sigma, tag=None): """ A Normal (or Gaussian) random variate Parameters ---------- mu : scalar The mean value of the distribution sigma : scalar The standard deviation (must be positive and non-zero) """ assert sigma > 0, 'Normal "sigma" must be greater than zero' return uv(ss.norm(loc=mu, scale=sigma), tag=tag)
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A Normal (or Gaussian) random variate Parameters ---------- mu : scalar The mean value of the distribution sigma : scalar The standard deviation (must be positive and non-zero)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L965-L977
train
tisimst/mcerp
mcerp/__init__.py
Pareto
def Pareto(q, a, tag=None): """ A Pareto random variate (first kind) Parameters ---------- q : scalar The scale parameter a : scalar The shape parameter (the minimum possible value) """ assert q > 0 and a > 0, 'Pareto "q" and "a" must be positive scalars' p = Uniform(0, 1, tag) return a * (1 - p) ** (-1.0 / q)
python
def Pareto(q, a, tag=None): """ A Pareto random variate (first kind) Parameters ---------- q : scalar The scale parameter a : scalar The shape parameter (the minimum possible value) """ assert q > 0 and a > 0, 'Pareto "q" and "a" must be positive scalars' p = Uniform(0, 1, tag) return a * (1 - p) ** (-1.0 / q)
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A Pareto random variate (first kind) Parameters ---------- q : scalar The scale parameter a : scalar The shape parameter (the minimum possible value)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L983-L996
train
tisimst/mcerp
mcerp/__init__.py
Pareto2
def Pareto2(q, b, tag=None): """ A Pareto random variate (second kind). This form always starts at the origin. Parameters ---------- q : scalar The scale parameter b : scalar The shape parameter """ assert q > 0 and b > 0, 'Pareto2 "q" and "b" must be positive scalars' return Pareto(q, b, tag) - b
python
def Pareto2(q, b, tag=None): """ A Pareto random variate (second kind). This form always starts at the origin. Parameters ---------- q : scalar The scale parameter b : scalar The shape parameter """ assert q > 0 and b > 0, 'Pareto2 "q" and "b" must be positive scalars' return Pareto(q, b, tag) - b
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A Pareto random variate (second kind). This form always starts at the origin. Parameters ---------- q : scalar The scale parameter b : scalar The shape parameter
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L999-L1012
train
tisimst/mcerp
mcerp/__init__.py
PERT
def PERT(low, peak, high, g=4.0, tag=None): """ A PERT random variate Parameters ---------- low : scalar Lower bound of the distribution support peak : scalar The location of the distribution's peak (low <= peak <= high) high : scalar Upper bound of the distribution support Optional -------- g : scalar Controls the uncertainty of the distribution around the peak. Smaller values make the distribution flatter and more uncertain around the peak while larger values make it focused and less uncertain around the peak. (Default: 4) """ a, b, c = [float(x) for x in [low, peak, high]] assert a <= b <= c, 'PERT "peak" must be greater than "low" and less than "high"' assert g >= 0, 'PERT "g" must be non-negative' mu = (a + g * b + c) / (g + 2) if mu == b: a1 = a2 = 3.0 else: a1 = ((mu - a) * (2 * b - a - c)) / ((b - mu) * (c - a)) a2 = a1 * (c - mu) / (mu - a) return Beta(a1, a2, a, c, tag)
python
def PERT(low, peak, high, g=4.0, tag=None): """ A PERT random variate Parameters ---------- low : scalar Lower bound of the distribution support peak : scalar The location of the distribution's peak (low <= peak <= high) high : scalar Upper bound of the distribution support Optional -------- g : scalar Controls the uncertainty of the distribution around the peak. Smaller values make the distribution flatter and more uncertain around the peak while larger values make it focused and less uncertain around the peak. (Default: 4) """ a, b, c = [float(x) for x in [low, peak, high]] assert a <= b <= c, 'PERT "peak" must be greater than "low" and less than "high"' assert g >= 0, 'PERT "g" must be non-negative' mu = (a + g * b + c) / (g + 2) if mu == b: a1 = a2 = 3.0 else: a1 = ((mu - a) * (2 * b - a - c)) / ((b - mu) * (c - a)) a2 = a1 * (c - mu) / (mu - a) return Beta(a1, a2, a, c, tag)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1015-L1046
train
tisimst/mcerp
mcerp/__init__.py
StudentT
def StudentT(v, tag=None): """ A Student-T random variate Parameters ---------- v : int The degrees of freedom of the distribution (must be greater than one) """ assert int(v) == v and v >= 1, 'Student-T "v" must be an integer greater than 0' return uv(ss.t(v), tag=tag)
python
def StudentT(v, tag=None): """ A Student-T random variate Parameters ---------- v : int The degrees of freedom of the distribution (must be greater than one) """ assert int(v) == v and v >= 1, 'Student-T "v" must be an integer greater than 0' return uv(ss.t(v), tag=tag)
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A Student-T random variate Parameters ---------- v : int The degrees of freedom of the distribution (must be greater than one)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1049-L1059
train
tisimst/mcerp
mcerp/__init__.py
Triangular
def Triangular(low, peak, high, tag=None): """ A triangular random variate Parameters ---------- low : scalar Lower bound of the distribution support peak : scalar The location of the triangle's peak (low <= peak <= high) high : scalar Upper bound of the distribution support """ assert low <= peak <= high, 'Triangular "peak" must lie between "low" and "high"' low, peak, high = [float(x) for x in [low, peak, high]] return uv( ss.triang((1.0 * peak - low) / (high - low), loc=low, scale=(high - low)), tag=tag, )
python
def Triangular(low, peak, high, tag=None): """ A triangular random variate Parameters ---------- low : scalar Lower bound of the distribution support peak : scalar The location of the triangle's peak (low <= peak <= high) high : scalar Upper bound of the distribution support """ assert low <= peak <= high, 'Triangular "peak" must lie between "low" and "high"' low, peak, high = [float(x) for x in [low, peak, high]] return uv( ss.triang((1.0 * peak - low) / (high - low), loc=low, scale=(high - low)), tag=tag, )
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1065-L1083
train
tisimst/mcerp
mcerp/__init__.py
Uniform
def Uniform(low, high, tag=None): """ A Uniform random variate Parameters ---------- low : scalar Lower bound of the distribution support. high : scalar Upper bound of the distribution support. """ assert low < high, 'Uniform "low" must be less than "high"' return uv(ss.uniform(loc=low, scale=high - low), tag=tag)
python
def Uniform(low, high, tag=None): """ A Uniform random variate Parameters ---------- low : scalar Lower bound of the distribution support. high : scalar Upper bound of the distribution support. """ assert low < high, 'Uniform "low" must be less than "high"' return uv(ss.uniform(loc=low, scale=high - low), tag=tag)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1089-L1101
train
tisimst/mcerp
mcerp/__init__.py
Weibull
def Weibull(lamda, k, tag=None): """ A Weibull random variate Parameters ---------- lamda : scalar The scale parameter k : scalar The shape parameter """ assert ( lamda > 0 and k > 0 ), 'Weibull "lamda" and "k" parameters must be greater than zero' return uv(ss.exponweib(lamda, k), tag=tag)
python
def Weibull(lamda, k, tag=None): """ A Weibull random variate Parameters ---------- lamda : scalar The scale parameter k : scalar The shape parameter """ assert ( lamda > 0 and k > 0 ), 'Weibull "lamda" and "k" parameters must be greater than zero' return uv(ss.exponweib(lamda, k), tag=tag)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1107-L1121
train
tisimst/mcerp
mcerp/__init__.py
Bernoulli
def Bernoulli(p, tag=None): """ A Bernoulli random variate Parameters ---------- p : scalar The probability of success """ assert ( 0 < p < 1 ), 'Bernoulli probability "p" must be between zero and one, non-inclusive' return uv(ss.bernoulli(p), tag=tag)
python
def Bernoulli(p, tag=None): """ A Bernoulli random variate Parameters ---------- p : scalar The probability of success """ assert ( 0 < p < 1 ), 'Bernoulli probability "p" must be between zero and one, non-inclusive' return uv(ss.bernoulli(p), tag=tag)
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A Bernoulli random variate Parameters ---------- p : scalar The probability of success
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1132-L1144
train
tisimst/mcerp
mcerp/__init__.py
Binomial
def Binomial(n, p, tag=None): """ A Binomial random variate Parameters ---------- n : int The number of trials p : scalar The probability of success """ assert ( int(n) == n and n > 0 ), 'Binomial number of trials "n" must be an integer greater than zero' assert ( 0 < p < 1 ), 'Binomial probability "p" must be between zero and one, non-inclusive' return uv(ss.binom(n, p), tag=tag)
python
def Binomial(n, p, tag=None): """ A Binomial random variate Parameters ---------- n : int The number of trials p : scalar The probability of success """ assert ( int(n) == n and n > 0 ), 'Binomial number of trials "n" must be an integer greater than zero' assert ( 0 < p < 1 ), 'Binomial probability "p" must be between zero and one, non-inclusive' return uv(ss.binom(n, p), tag=tag)
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A Binomial random variate Parameters ---------- n : int The number of trials p : scalar The probability of success
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1150-L1167
train
tisimst/mcerp
mcerp/__init__.py
Geometric
def Geometric(p, tag=None): """ A Geometric random variate Parameters ---------- p : scalar The probability of success """ assert ( 0 < p < 1 ), 'Geometric probability "p" must be between zero and one, non-inclusive' return uv(ss.geom(p), tag=tag)
python
def Geometric(p, tag=None): """ A Geometric random variate Parameters ---------- p : scalar The probability of success """ assert ( 0 < p < 1 ), 'Geometric probability "p" must be between zero and one, non-inclusive' return uv(ss.geom(p), tag=tag)
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1173-L1185
train
tisimst/mcerp
mcerp/__init__.py
Hypergeometric
def Hypergeometric(N, n, K, tag=None): """ A Hypergeometric random variate Parameters ---------- N : int The total population size n : int The number of individuals of interest in the population K : int The number of individuals that will be chosen from the population Example ------- (Taken from the wikipedia page) Assume we have an urn with two types of marbles, 45 black ones and 5 white ones. Standing next to the urn, you close your eyes and draw 10 marbles without replacement. What is the probability that exactly 4 of the 10 are white? :: >>> black = 45 >>> white = 5 >>> draw = 10 # Now we create the distribution >>> h = H(black + white, white, draw) # To check the probability, in this case, we can use the underlying # scipy.stats object >>> h.rv.pmf(4) # What is the probability that white count = 4? 0.0039645830580151975 """ assert ( int(N) == N and N > 0 ), 'Hypergeometric total population size "N" must be an integer greater than zero.' assert ( int(n) == n and 0 < n <= N ), 'Hypergeometric interest population size "n" must be an integer greater than zero and no more than the total population size.' assert ( int(K) == K and 0 < K <= N ), 'Hypergeometric chosen population size "K" must be an integer greater than zero and no more than the total population size.' return uv(ss.hypergeom(N, n, K), tag=tag)
python
def Hypergeometric(N, n, K, tag=None): """ A Hypergeometric random variate Parameters ---------- N : int The total population size n : int The number of individuals of interest in the population K : int The number of individuals that will be chosen from the population Example ------- (Taken from the wikipedia page) Assume we have an urn with two types of marbles, 45 black ones and 5 white ones. Standing next to the urn, you close your eyes and draw 10 marbles without replacement. What is the probability that exactly 4 of the 10 are white? :: >>> black = 45 >>> white = 5 >>> draw = 10 # Now we create the distribution >>> h = H(black + white, white, draw) # To check the probability, in this case, we can use the underlying # scipy.stats object >>> h.rv.pmf(4) # What is the probability that white count = 4? 0.0039645830580151975 """ assert ( int(N) == N and N > 0 ), 'Hypergeometric total population size "N" must be an integer greater than zero.' assert ( int(n) == n and 0 < n <= N ), 'Hypergeometric interest population size "n" must be an integer greater than zero and no more than the total population size.' assert ( int(K) == K and 0 < K <= N ), 'Hypergeometric chosen population size "K" must be an integer greater than zero and no more than the total population size.' return uv(ss.hypergeom(N, n, K), tag=tag)
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A Hypergeometric random variate Parameters ---------- N : int The total population size n : int The number of individuals of interest in the population K : int The number of individuals that will be chosen from the population Example ------- (Taken from the wikipedia page) Assume we have an urn with two types of marbles, 45 black ones and 5 white ones. Standing next to the urn, you close your eyes and draw 10 marbles without replacement. What is the probability that exactly 4 of the 10 are white? :: >>> black = 45 >>> white = 5 >>> draw = 10 # Now we create the distribution >>> h = H(black + white, white, draw) # To check the probability, in this case, we can use the underlying # scipy.stats object >>> h.rv.pmf(4) # What is the probability that white count = 4? 0.0039645830580151975
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1191-L1234
train
tisimst/mcerp
mcerp/__init__.py
Poisson
def Poisson(lamda, tag=None): """ A Poisson random variate Parameters ---------- lamda : scalar The rate of an occurance within a specified interval of time or space. """ assert lamda > 0, 'Poisson "lamda" must be greater than zero.' return uv(ss.poisson(lamda), tag=tag)
python
def Poisson(lamda, tag=None): """ A Poisson random variate Parameters ---------- lamda : scalar The rate of an occurance within a specified interval of time or space. """ assert lamda > 0, 'Poisson "lamda" must be greater than zero.' return uv(ss.poisson(lamda), tag=tag)
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A Poisson random variate Parameters ---------- lamda : scalar The rate of an occurance within a specified interval of time or space.
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1240-L1250
train
tisimst/mcerp
mcerp/__init__.py
covariance_matrix
def covariance_matrix(nums_with_uncert): """ Calculate the covariance matrix of uncertain variables, oriented by the order of the inputs Parameters ---------- nums_with_uncert : array-like A list of variables that have an associated uncertainty Returns ------- cov_matrix : 2d-array-like A nested list containing covariance values Example ------- >>> x = N(1, 0.1) >>> y = N(10, 0.1) >>> z = x + 2*y >>> covariance_matrix([x,y,z]) [[ 9.99694861e-03 2.54000840e-05 1.00477488e-02] [ 2.54000840e-05 9.99823207e-03 2.00218642e-02] [ 1.00477488e-02 2.00218642e-02 5.00914772e-02]] """ ufuncs = list(map(to_uncertain_func, nums_with_uncert)) cov_matrix = [] for (i1, expr1) in enumerate(ufuncs): coefs_expr1 = [] mean1 = expr1.mean for (i2, expr2) in enumerate(ufuncs[: i1 + 1]): mean2 = expr2.mean coef = np.mean((expr1._mcpts - mean1) * (expr2._mcpts - mean2)) coefs_expr1.append(coef) cov_matrix.append(coefs_expr1) # We symmetrize the matrix: for (i, covariance_coefs) in enumerate(cov_matrix): covariance_coefs.extend(cov_matrix[j][i] for j in range(i + 1, len(cov_matrix))) return cov_matrix
python
def covariance_matrix(nums_with_uncert): """ Calculate the covariance matrix of uncertain variables, oriented by the order of the inputs Parameters ---------- nums_with_uncert : array-like A list of variables that have an associated uncertainty Returns ------- cov_matrix : 2d-array-like A nested list containing covariance values Example ------- >>> x = N(1, 0.1) >>> y = N(10, 0.1) >>> z = x + 2*y >>> covariance_matrix([x,y,z]) [[ 9.99694861e-03 2.54000840e-05 1.00477488e-02] [ 2.54000840e-05 9.99823207e-03 2.00218642e-02] [ 1.00477488e-02 2.00218642e-02 5.00914772e-02]] """ ufuncs = list(map(to_uncertain_func, nums_with_uncert)) cov_matrix = [] for (i1, expr1) in enumerate(ufuncs): coefs_expr1 = [] mean1 = expr1.mean for (i2, expr2) in enumerate(ufuncs[: i1 + 1]): mean2 = expr2.mean coef = np.mean((expr1._mcpts - mean1) * (expr2._mcpts - mean2)) coefs_expr1.append(coef) cov_matrix.append(coefs_expr1) # We symmetrize the matrix: for (i, covariance_coefs) in enumerate(cov_matrix): covariance_coefs.extend(cov_matrix[j][i] for j in range(i + 1, len(cov_matrix))) return cov_matrix
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1261-L1303
train
tisimst/mcerp
mcerp/__init__.py
correlation_matrix
def correlation_matrix(nums_with_uncert): """ Calculate the correlation matrix of uncertain variables, oriented by the order of the inputs Parameters ---------- nums_with_uncert : array-like A list of variables that have an associated uncertainty Returns ------- corr_matrix : 2d-array-like A nested list containing covariance values Example ------- >>> x = N(1, 0.1) >>> y = N(10, 0.1) >>> z = x + 2*y >>> correlation_matrix([x,y,z]) [[ 0.99969486 0.00254001 0.4489385 ] [ 0.00254001 0.99982321 0.89458702] [ 0.4489385 0.89458702 1. ]] """ ufuncs = list(map(to_uncertain_func, nums_with_uncert)) data = np.vstack([ufunc._mcpts for ufunc in ufuncs]) return np.corrcoef(data.T, rowvar=0)
python
def correlation_matrix(nums_with_uncert): """ Calculate the correlation matrix of uncertain variables, oriented by the order of the inputs Parameters ---------- nums_with_uncert : array-like A list of variables that have an associated uncertainty Returns ------- corr_matrix : 2d-array-like A nested list containing covariance values Example ------- >>> x = N(1, 0.1) >>> y = N(10, 0.1) >>> z = x + 2*y >>> correlation_matrix([x,y,z]) [[ 0.99969486 0.00254001 0.4489385 ] [ 0.00254001 0.99982321 0.89458702] [ 0.4489385 0.89458702 1. ]] """ ufuncs = list(map(to_uncertain_func, nums_with_uncert)) data = np.vstack([ufunc._mcpts for ufunc in ufuncs]) return np.corrcoef(data.T, rowvar=0)
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Calculate the correlation matrix of uncertain variables, oriented by the order of the inputs Parameters ---------- nums_with_uncert : array-like A list of variables that have an associated uncertainty Returns ------- corr_matrix : 2d-array-like A nested list containing covariance values Example ------- >>> x = N(1, 0.1) >>> y = N(10, 0.1) >>> z = x + 2*y >>> correlation_matrix([x,y,z]) [[ 0.99969486 0.00254001 0.4489385 ] [ 0.00254001 0.99982321 0.89458702] [ 0.4489385 0.89458702 1. ]]
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L1306-L1335
train
tisimst/mcerp
mcerp/__init__.py
UncertainFunction.var
def var(self): """ Variance value as a result of an uncertainty calculation """ mn = self.mean vr = np.mean((self._mcpts - mn) ** 2) return vr
python
def var(self): """ Variance value as a result of an uncertainty calculation """ mn = self.mean vr = np.mean((self._mcpts - mn) ** 2) return vr
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Variance value as a result of an uncertainty calculation
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L74-L80
train
tisimst/mcerp
mcerp/__init__.py
UncertainFunction.skew
def skew(self): r""" Skewness coefficient value as a result of an uncertainty calculation, defined as:: _____ m3 \/beta1 = ------ std**3 where m3 is the third central moment and std is the standard deviation """ mn = self.mean sd = self.std sk = 0.0 if abs(sd) <= 1e-8 else np.mean((self._mcpts - mn) ** 3) / sd ** 3 return sk
python
def skew(self): r""" Skewness coefficient value as a result of an uncertainty calculation, defined as:: _____ m3 \/beta1 = ------ std**3 where m3 is the third central moment and std is the standard deviation """ mn = self.mean sd = self.std sk = 0.0 if abs(sd) <= 1e-8 else np.mean((self._mcpts - mn) ** 3) / sd ** 3 return sk
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r""" Skewness coefficient value as a result of an uncertainty calculation, defined as:: _____ m3 \/beta1 = ------ std**3 where m3 is the third central moment and std is the standard deviation
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L95-L109
train
tisimst/mcerp
mcerp/__init__.py
UncertainFunction.kurt
def kurt(self): """ Kurtosis coefficient value as a result of an uncertainty calculation, defined as:: m4 beta2 = ------ std**4 where m4 is the fourth central moment and std is the standard deviation """ mn = self.mean sd = self.std kt = 0.0 if abs(sd) <= 1e-8 else np.mean((self._mcpts - mn) ** 4) / sd ** 4 return kt
python
def kurt(self): """ Kurtosis coefficient value as a result of an uncertainty calculation, defined as:: m4 beta2 = ------ std**4 where m4 is the fourth central moment and std is the standard deviation """ mn = self.mean sd = self.std kt = 0.0 if abs(sd) <= 1e-8 else np.mean((self._mcpts - mn) ** 4) / sd ** 4 return kt
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Kurtosis coefficient value as a result of an uncertainty calculation, defined as:: m4 beta2 = ------ std**4 where m4 is the fourth central moment and std is the standard deviation
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L112-L126
train
tisimst/mcerp
mcerp/__init__.py
UncertainFunction.stats
def stats(self): """ The first four standard moments of a distribution: mean, variance, and standardized skewness and kurtosis coefficients. """ mn = self.mean vr = self.var sk = self.skew kt = self.kurt return [mn, vr, sk, kt]
python
def stats(self): """ The first four standard moments of a distribution: mean, variance, and standardized skewness and kurtosis coefficients. """ mn = self.mean vr = self.var sk = self.skew kt = self.kurt return [mn, vr, sk, kt]
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The first four standard moments of a distribution: mean, variance, and standardized skewness and kurtosis coefficients.
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L129-L138
train
tisimst/mcerp
mcerp/__init__.py
UncertainFunction.percentile
def percentile(self, val): """ Get the distribution value at a given percentile or set of percentiles. This follows the NIST method for calculating percentiles. Parameters ---------- val : scalar or array Either a single value or an array of values between 0 and 1. Returns ------- out : scalar or array The actual distribution value that appears at the requested percentile value or values """ try: # test to see if an input is given as an array out = [self.percentile(vi) for vi in val] except (ValueError, TypeError): if val <= 0: out = float(min(self._mcpts)) elif val >= 1: out = float(max(self._mcpts)) else: tmp = np.sort(self._mcpts) n = val * (len(tmp) + 1) k, d = int(n), n - int(n) out = float(tmp[k] + d * (tmp[k + 1] - tmp[k])) if isinstance(val, np.ndarray): out = np.array(out) return out
python
def percentile(self, val): """ Get the distribution value at a given percentile or set of percentiles. This follows the NIST method for calculating percentiles. Parameters ---------- val : scalar or array Either a single value or an array of values between 0 and 1. Returns ------- out : scalar or array The actual distribution value that appears at the requested percentile value or values """ try: # test to see if an input is given as an array out = [self.percentile(vi) for vi in val] except (ValueError, TypeError): if val <= 0: out = float(min(self._mcpts)) elif val >= 1: out = float(max(self._mcpts)) else: tmp = np.sort(self._mcpts) n = val * (len(tmp) + 1) k, d = int(n), n - int(n) out = float(tmp[k] + d * (tmp[k + 1] - tmp[k])) if isinstance(val, np.ndarray): out = np.array(out) return out
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Get the distribution value at a given percentile or set of percentiles. This follows the NIST method for calculating percentiles. Parameters ---------- val : scalar or array Either a single value or an array of values between 0 and 1. Returns ------- out : scalar or array The actual distribution value that appears at the requested percentile value or values
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L140-L172
train
tisimst/mcerp
mcerp/__init__.py
UncertainFunction.describe
def describe(self, name=None): """ Cleanly show what the four displayed distribution moments are: - Mean - Variance - Standardized Skewness Coefficient - Standardized Kurtosis Coefficient For a standard Normal distribution, these are [0, 1, 0, 3]. If the object has an associated tag, this is presented. If the optional ``name`` kwarg is utilized, this is presented as with the moments. Otherwise, no unique name is presented. Example ======= :: >>> x = N(0, 1, 'x') >>> x.describe() # print tag since assigned MCERP Uncertain Value (x): ... >>> x.describe('foobar') # 'name' kwarg takes precedence MCERP Uncertain Value (foobar): ... >>> y = x**2 >>> y.describe('y') # print name since assigned MCERP Uncertain Value (y): ... >>> y.describe() # print nothing since no tag MCERP Uncertain Value: ... """ mn, vr, sk, kt = self.stats if name is not None: s = "MCERP Uncertain Value (" + name + "):\n" elif self.tag is not None: s = "MCERP Uncertain Value (" + self.tag + "):\n" else: s = "MCERP Uncertain Value:\n" s += " > Mean................... {: }\n".format(mn) s += " > Variance............... {: }\n".format(vr) s += " > Skewness Coefficient... {: }\n".format(sk) s += " > Kurtosis Coefficient... {: }\n".format(kt) print(s)
python
def describe(self, name=None): """ Cleanly show what the four displayed distribution moments are: - Mean - Variance - Standardized Skewness Coefficient - Standardized Kurtosis Coefficient For a standard Normal distribution, these are [0, 1, 0, 3]. If the object has an associated tag, this is presented. If the optional ``name`` kwarg is utilized, this is presented as with the moments. Otherwise, no unique name is presented. Example ======= :: >>> x = N(0, 1, 'x') >>> x.describe() # print tag since assigned MCERP Uncertain Value (x): ... >>> x.describe('foobar') # 'name' kwarg takes precedence MCERP Uncertain Value (foobar): ... >>> y = x**2 >>> y.describe('y') # print name since assigned MCERP Uncertain Value (y): ... >>> y.describe() # print nothing since no tag MCERP Uncertain Value: ... """ mn, vr, sk, kt = self.stats if name is not None: s = "MCERP Uncertain Value (" + name + "):\n" elif self.tag is not None: s = "MCERP Uncertain Value (" + self.tag + "):\n" else: s = "MCERP Uncertain Value:\n" s += " > Mean................... {: }\n".format(mn) s += " > Variance............... {: }\n".format(vr) s += " > Skewness Coefficient... {: }\n".format(sk) s += " > Kurtosis Coefficient... {: }\n".format(kt) print(s)
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Cleanly show what the four displayed distribution moments are: - Mean - Variance - Standardized Skewness Coefficient - Standardized Kurtosis Coefficient For a standard Normal distribution, these are [0, 1, 0, 3]. If the object has an associated tag, this is presented. If the optional ``name`` kwarg is utilized, this is presented as with the moments. Otherwise, no unique name is presented. Example ======= :: >>> x = N(0, 1, 'x') >>> x.describe() # print tag since assigned MCERP Uncertain Value (x): ... >>> x.describe('foobar') # 'name' kwarg takes precedence MCERP Uncertain Value (foobar): ... >>> y = x**2 >>> y.describe('y') # print name since assigned MCERP Uncertain Value (y): ... >>> y.describe() # print nothing since no tag MCERP Uncertain Value: ...
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L191-L239
train
tisimst/mcerp
mcerp/__init__.py
UncertainFunction.plot
def plot(self, hist=False, show=False, **kwargs): """ Plot the distribution of the UncertainFunction. By default, the distribution is shown with a kernel density estimate (kde). Optional -------- hist : bool If true, a density histogram is displayed (histtype='stepfilled') show : bool If ``True``, the figure will be displayed after plotting the distribution. If ``False``, an explicit call to ``plt.show()`` is required to display the figure. kwargs : any valid matplotlib.pyplot.plot or .hist kwarg """ import matplotlib.pyplot as plt vals = self._mcpts low = min(vals) high = max(vals) p = ss.kde.gaussian_kde(vals) xp = np.linspace(low, high, 100) if hist: h = plt.hist( vals, bins=int(np.sqrt(len(vals)) + 0.5), histtype="stepfilled", normed=True, **kwargs ) plt.ylim(0, 1.1 * h[0].max()) else: plt.plot(xp, p.evaluate(xp), **kwargs) plt.xlim(low - (high - low) * 0.1, high + (high - low) * 0.1) if show: self.show()
python
def plot(self, hist=False, show=False, **kwargs): """ Plot the distribution of the UncertainFunction. By default, the distribution is shown with a kernel density estimate (kde). Optional -------- hist : bool If true, a density histogram is displayed (histtype='stepfilled') show : bool If ``True``, the figure will be displayed after plotting the distribution. If ``False``, an explicit call to ``plt.show()`` is required to display the figure. kwargs : any valid matplotlib.pyplot.plot or .hist kwarg """ import matplotlib.pyplot as plt vals = self._mcpts low = min(vals) high = max(vals) p = ss.kde.gaussian_kde(vals) xp = np.linspace(low, high, 100) if hist: h = plt.hist( vals, bins=int(np.sqrt(len(vals)) + 0.5), histtype="stepfilled", normed=True, **kwargs ) plt.ylim(0, 1.1 * h[0].max()) else: plt.plot(xp, p.evaluate(xp), **kwargs) plt.xlim(low - (high - low) * 0.1, high + (high - low) * 0.1) if show: self.show()
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L241-L281
train
tisimst/mcerp
mcerp/__init__.py
UncertainVariable.plot
def plot(self, hist=False, show=False, **kwargs): """ Plot the distribution of the UncertainVariable. Continuous distributions are plotted with a line plot and discrete distributions are plotted with discrete circles. Optional -------- hist : bool If true, a histogram is displayed show : bool If ``True``, the figure will be displayed after plotting the distribution. If ``False``, an explicit call to ``plt.show()`` is required to display the figure. kwargs : any valid matplotlib.pyplot.plot kwarg """ import matplotlib.pyplot as plt if hist: vals = self._mcpts low = vals.min() high = vals.max() h = plt.hist( vals, bins=int(np.sqrt(len(vals)) + 0.5), histtype="stepfilled", normed=True, **kwargs ) plt.ylim(0, 1.1 * h[0].max()) else: bound = 0.0001 low = self.rv.ppf(bound) high = self.rv.ppf(1 - bound) if hasattr(self.rv.dist, "pmf"): low = int(low) high = int(high) vals = list(range(low, high + 1)) plt.plot(vals, self.rv.pmf(vals), "o", **kwargs) else: vals = np.linspace(low, high, 500) plt.plot(vals, self.rv.pdf(vals), **kwargs) plt.xlim(low - (high - low) * 0.1, high + (high - low) * 0.1) if show: self.show()
python
def plot(self, hist=False, show=False, **kwargs): """ Plot the distribution of the UncertainVariable. Continuous distributions are plotted with a line plot and discrete distributions are plotted with discrete circles. Optional -------- hist : bool If true, a histogram is displayed show : bool If ``True``, the figure will be displayed after plotting the distribution. If ``False``, an explicit call to ``plt.show()`` is required to display the figure. kwargs : any valid matplotlib.pyplot.plot kwarg """ import matplotlib.pyplot as plt if hist: vals = self._mcpts low = vals.min() high = vals.max() h = plt.hist( vals, bins=int(np.sqrt(len(vals)) + 0.5), histtype="stepfilled", normed=True, **kwargs ) plt.ylim(0, 1.1 * h[0].max()) else: bound = 0.0001 low = self.rv.ppf(bound) high = self.rv.ppf(1 - bound) if hasattr(self.rv.dist, "pmf"): low = int(low) high = int(high) vals = list(range(low, high + 1)) plt.plot(vals, self.rv.pmf(vals), "o", **kwargs) else: vals = np.linspace(low, high, 500) plt.plot(vals, self.rv.pdf(vals), **kwargs) plt.xlim(low - (high - low) * 0.1, high + (high - low) * 0.1) if show: self.show()
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2bb8260c9ad2d58a806847f1b627b6451e407de1
https://github.com/tisimst/mcerp/blob/2bb8260c9ad2d58a806847f1b627b6451e407de1/mcerp/__init__.py#L652-L698
train
shoeffner/cvloop
cvloop/functions.py
DrawHat.load_hat
def load_hat(self, path): # pylint: disable=no-self-use """Loads the hat from a picture at path. Args: path: The path to load from Returns: The hat data. """ hat = cv2.imread(path, cv2.IMREAD_UNCHANGED) if hat is None: raise ValueError('No hat image found at `{}`'.format(path)) b, g, r, a = cv2.split(hat) return cv2.merge((r, g, b, a))
python
def load_hat(self, path): # pylint: disable=no-self-use """Loads the hat from a picture at path. Args: path: The path to load from Returns: The hat data. """ hat = cv2.imread(path, cv2.IMREAD_UNCHANGED) if hat is None: raise ValueError('No hat image found at `{}`'.format(path)) b, g, r, a = cv2.split(hat) return cv2.merge((r, g, b, a))
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Loads the hat from a picture at path. Args: path: The path to load from Returns: The hat data.
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/functions.py#L173-L186
train
shoeffner/cvloop
cvloop/functions.py
DrawHat.find_faces
def find_faces(self, image, draw_box=False): """Uses a haarcascade to detect faces inside an image. Args: image: The image. draw_box: If True, the image will be marked with a rectangle. Return: The faces as returned by OpenCV's detectMultiScale method for cascades. """ frame_gray = cv2.cvtColor(image, cv2.COLOR_RGB2GRAY) faces = self.cascade.detectMultiScale( frame_gray, scaleFactor=1.3, minNeighbors=5, minSize=(50, 50), flags=0) if draw_box: for x, y, w, h in faces: cv2.rectangle(image, (x, y), (x + w, y + h), (0, 255, 0), 2) return faces
python
def find_faces(self, image, draw_box=False): """Uses a haarcascade to detect faces inside an image. Args: image: The image. draw_box: If True, the image will be marked with a rectangle. Return: The faces as returned by OpenCV's detectMultiScale method for cascades. """ frame_gray = cv2.cvtColor(image, cv2.COLOR_RGB2GRAY) faces = self.cascade.detectMultiScale( frame_gray, scaleFactor=1.3, minNeighbors=5, minSize=(50, 50), flags=0) if draw_box: for x, y, w, h in faces: cv2.rectangle(image, (x, y), (x + w, y + h), (0, 255, 0), 2) return faces
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/functions.py#L188-L211
train
uber-archive/h1-python
h1/client.py
HackerOneClient.find_resources
def find_resources(self, rsrc_type, sort=None, yield_pages=False, **kwargs): """Find instances of `rsrc_type` that match the filter in `**kwargs`""" return rsrc_type.find(self, sort=sort, yield_pages=yield_pages, **kwargs)
python
def find_resources(self, rsrc_type, sort=None, yield_pages=False, **kwargs): """Find instances of `rsrc_type` that match the filter in `**kwargs`""" return rsrc_type.find(self, sort=sort, yield_pages=yield_pages, **kwargs)
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Find instances of `rsrc_type` that match the filter in `**kwargs`
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c91aec6a26887e453106af39e96ec6d5c7b00c9d
https://github.com/uber-archive/h1-python/blob/c91aec6a26887e453106af39e96ec6d5c7b00c9d/h1/client.py#L111-L113
train
edelooff/sqlalchemy-json
sqlalchemy_json/track.py
TrackedObject.changed
def changed(self, message=None, *args): """Marks the object as changed. If a `parent` attribute is set, the `changed()` method on the parent will be called, propagating the change notification up the chain. The message (if provided) will be debug logged. """ if message is not None: self.logger.debug('%s: %s', self._repr(), message % args) self.logger.debug('%s: changed', self._repr()) if self.parent is not None: self.parent.changed() elif isinstance(self, Mutable): super(TrackedObject, self).changed()
python
def changed(self, message=None, *args): """Marks the object as changed. If a `parent` attribute is set, the `changed()` method on the parent will be called, propagating the change notification up the chain. The message (if provided) will be debug logged. """ if message is not None: self.logger.debug('%s: %s', self._repr(), message % args) self.logger.debug('%s: changed', self._repr()) if self.parent is not None: self.parent.changed() elif isinstance(self, Mutable): super(TrackedObject, self).changed()
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Marks the object as changed. If a `parent` attribute is set, the `changed()` method on the parent will be called, propagating the change notification up the chain. The message (if provided) will be debug logged.
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4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc
https://github.com/edelooff/sqlalchemy-json/blob/4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc/sqlalchemy_json/track.py#L25-L39
train
edelooff/sqlalchemy-json
sqlalchemy_json/track.py
TrackedObject.register
def register(cls, origin_type): """Decorator for mutation tracker registration. The provided `origin_type` is mapped to the decorated class such that future calls to `convert()` will convert the object of `origin_type` to an instance of the decorated class. """ def decorator(tracked_type): """Adds the decorated class to the `_type_mapping` dictionary.""" cls._type_mapping[origin_type] = tracked_type return tracked_type return decorator
python
def register(cls, origin_type): """Decorator for mutation tracker registration. The provided `origin_type` is mapped to the decorated class such that future calls to `convert()` will convert the object of `origin_type` to an instance of the decorated class. """ def decorator(tracked_type): """Adds the decorated class to the `_type_mapping` dictionary.""" cls._type_mapping[origin_type] = tracked_type return tracked_type return decorator
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Decorator for mutation tracker registration. The provided `origin_type` is mapped to the decorated class such that future calls to `convert()` will convert the object of `origin_type` to an instance of the decorated class.
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4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc
https://github.com/edelooff/sqlalchemy-json/blob/4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc/sqlalchemy_json/track.py#L42-L53
train
edelooff/sqlalchemy-json
sqlalchemy_json/track.py
TrackedObject.convert
def convert(cls, obj, parent): """Converts objects to registered tracked types This checks the type of the given object against the registered tracked types. When a match is found, the given object will be converted to the tracked type, its parent set to the provided parent, and returned. If its type does not occur in the registered types mapping, the object is returned unchanged. """ replacement_type = cls._type_mapping.get(type(obj)) if replacement_type is not None: new = replacement_type(obj) new.parent = parent return new return obj
python
def convert(cls, obj, parent): """Converts objects to registered tracked types This checks the type of the given object against the registered tracked types. When a match is found, the given object will be converted to the tracked type, its parent set to the provided parent, and returned. If its type does not occur in the registered types mapping, the object is returned unchanged. """ replacement_type = cls._type_mapping.get(type(obj)) if replacement_type is not None: new = replacement_type(obj) new.parent = parent return new return obj
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Converts objects to registered tracked types This checks the type of the given object against the registered tracked types. When a match is found, the given object will be converted to the tracked type, its parent set to the provided parent, and returned. If its type does not occur in the registered types mapping, the object is returned unchanged.
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4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc
https://github.com/edelooff/sqlalchemy-json/blob/4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc/sqlalchemy_json/track.py#L56-L71
train
edelooff/sqlalchemy-json
sqlalchemy_json/track.py
TrackedObject.convert_items
def convert_items(self, items): """Generator like `convert_iterable`, but for 2-tuple iterators.""" return ((key, self.convert(value, self)) for key, value in items)
python
def convert_items(self, items): """Generator like `convert_iterable`, but for 2-tuple iterators.""" return ((key, self.convert(value, self)) for key, value in items)
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Generator like `convert_iterable`, but for 2-tuple iterators.
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4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc
https://github.com/edelooff/sqlalchemy-json/blob/4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc/sqlalchemy_json/track.py#L77-L79
train
edelooff/sqlalchemy-json
sqlalchemy_json/track.py
TrackedObject.convert_mapping
def convert_mapping(self, mapping): """Convenience method to track either a dict or a 2-tuple iterator.""" if isinstance(mapping, dict): return self.convert_items(iteritems(mapping)) return self.convert_items(mapping)
python
def convert_mapping(self, mapping): """Convenience method to track either a dict or a 2-tuple iterator.""" if isinstance(mapping, dict): return self.convert_items(iteritems(mapping)) return self.convert_items(mapping)
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4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc
https://github.com/edelooff/sqlalchemy-json/blob/4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc/sqlalchemy_json/track.py#L81-L85
train
praekelt/django-preferences
preferences/admin.py
PreferencesAdmin.changelist_view
def changelist_view(self, request, extra_context=None): """ If we only have a single preference object redirect to it, otherwise display listing. """ model = self.model if model.objects.all().count() > 1: return super(PreferencesAdmin, self).changelist_view(request) else: obj = model.singleton.get() return redirect( reverse( 'admin:%s_%s_change' % ( model._meta.app_label, model._meta.model_name ), args=(obj.id,) ) )
python
def changelist_view(self, request, extra_context=None): """ If we only have a single preference object redirect to it, otherwise display listing. """ model = self.model if model.objects.all().count() > 1: return super(PreferencesAdmin, self).changelist_view(request) else: obj = model.singleton.get() return redirect( reverse( 'admin:%s_%s_change' % ( model._meta.app_label, model._meta.model_name ), args=(obj.id,) ) )
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If we only have a single preference object redirect to it, otherwise display listing.
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724f23da45449e96feb5179cb34e3d380cf151a1
https://github.com/praekelt/django-preferences/blob/724f23da45449e96feb5179cb34e3d380cf151a1/preferences/admin.py#L13-L30
train
voyages-sncf-technologies/nexus_uploader
setup.py
md2rst
def md2rst(md_lines): 'Only converts headers' lvl2header_char = {1: '=', 2: '-', 3: '~'} for md_line in md_lines: if md_line.startswith('#'): header_indent, header_text = md_line.split(' ', 1) yield header_text header_char = lvl2header_char[len(header_indent)] yield header_char * len(header_text) else: yield md_line
python
def md2rst(md_lines): 'Only converts headers' lvl2header_char = {1: '=', 2: '-', 3: '~'} for md_line in md_lines: if md_line.startswith('#'): header_indent, header_text = md_line.split(' ', 1) yield header_text header_char = lvl2header_char[len(header_indent)] yield header_char * len(header_text) else: yield md_line
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Only converts headers
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dca654f9080264b1dcaabfc2fd19f26b1c4f59fe
https://github.com/voyages-sncf-technologies/nexus_uploader/blob/dca654f9080264b1dcaabfc2fd19f26b1c4f59fe/setup.py#L24-L34
train
voyages-sncf-technologies/nexus_uploader
nexus_uploader/utils.py
aslist
def aslist(generator): 'Function decorator to transform a generator into a list' def wrapper(*args, **kwargs): return list(generator(*args, **kwargs)) return wrapper
python
def aslist(generator): 'Function decorator to transform a generator into a list' def wrapper(*args, **kwargs): return list(generator(*args, **kwargs)) return wrapper
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Function decorator to transform a generator into a list
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dca654f9080264b1dcaabfc2fd19f26b1c4f59fe
https://github.com/voyages-sncf-technologies/nexus_uploader/blob/dca654f9080264b1dcaabfc2fd19f26b1c4f59fe/nexus_uploader/utils.py#L17-L21
train
voyages-sncf-technologies/nexus_uploader
nexus_uploader/pypi.py
get_package_release_from_pypi
def get_package_release_from_pypi(pkg_name, version, pypi_json_api_url, allowed_classifiers): """ No classifier-based selection of Python packages is currently implemented: for now we don't fetch any .whl or .egg Eventually, we should select the best release available, based on the classifier & PEP 425: https://www.python.org/dev/peps/pep-0425/ E.g. a wheel when available but NOT for tornado 4.3 for example, where available wheels are only for Windows. Note also that some packages don't have .whl distributed, e.g. https://bugs.launchpad.net/lxml/+bug/1176147 """ matching_releases = get_package_releases_matching_version(pkg_name, version, pypi_json_api_url) src_releases = [release for release in matching_releases if release['python_version'] == 'source'] if src_releases: return select_src_release(src_releases, pkg_name, target_classifiers=('py2.py3-none-any',), select_arbitrary_version_if_none_match=True) if allowed_classifiers: return select_src_release(matching_releases, pkg_name, target_classifiers=allowed_classifiers) raise PypiQueryError('No source supported found for package {} version {}'.format(pkg_name, version))
python
def get_package_release_from_pypi(pkg_name, version, pypi_json_api_url, allowed_classifiers): """ No classifier-based selection of Python packages is currently implemented: for now we don't fetch any .whl or .egg Eventually, we should select the best release available, based on the classifier & PEP 425: https://www.python.org/dev/peps/pep-0425/ E.g. a wheel when available but NOT for tornado 4.3 for example, where available wheels are only for Windows. Note also that some packages don't have .whl distributed, e.g. https://bugs.launchpad.net/lxml/+bug/1176147 """ matching_releases = get_package_releases_matching_version(pkg_name, version, pypi_json_api_url) src_releases = [release for release in matching_releases if release['python_version'] == 'source'] if src_releases: return select_src_release(src_releases, pkg_name, target_classifiers=('py2.py3-none-any',), select_arbitrary_version_if_none_match=True) if allowed_classifiers: return select_src_release(matching_releases, pkg_name, target_classifiers=allowed_classifiers) raise PypiQueryError('No source supported found for package {} version {}'.format(pkg_name, version))
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dca654f9080264b1dcaabfc2fd19f26b1c4f59fe
https://github.com/voyages-sncf-technologies/nexus_uploader/blob/dca654f9080264b1dcaabfc2fd19f26b1c4f59fe/nexus_uploader/pypi.py#L27-L40
train
voyages-sncf-technologies/nexus_uploader
nexus_uploader/pypi.py
extract_classifier_and_extension
def extract_classifier_and_extension(pkg_name, filename): """ Returns a PEP425-compliant classifier (or 'py2.py3-none-any' if it cannot be extracted), and the file extension TODO: return a classifier 3-members namedtuple instead of a single string """ basename, _, extension = filename.rpartition('.') if extension == 'gz' and filename.endswith('.tar.gz'): extension = 'tar.gz' basename = filename[:-7] if basename == pkg_name or basename[len(pkg_name)] != '-': return 'py2.py3-none-any', extension basename = basename[len(pkg_name)+1:] classifier_parts = basename.split('-') if len(classifier_parts) < 3: return 'py2.py3-none-any', extension if len(classifier_parts) == 3: _, _, classifier_parts[0] = classifier_parts[0].rpartition('.') return '-'.join(classifier_parts[-3:]), extension
python
def extract_classifier_and_extension(pkg_name, filename): """ Returns a PEP425-compliant classifier (or 'py2.py3-none-any' if it cannot be extracted), and the file extension TODO: return a classifier 3-members namedtuple instead of a single string """ basename, _, extension = filename.rpartition('.') if extension == 'gz' and filename.endswith('.tar.gz'): extension = 'tar.gz' basename = filename[:-7] if basename == pkg_name or basename[len(pkg_name)] != '-': return 'py2.py3-none-any', extension basename = basename[len(pkg_name)+1:] classifier_parts = basename.split('-') if len(classifier_parts) < 3: return 'py2.py3-none-any', extension if len(classifier_parts) == 3: _, _, classifier_parts[0] = classifier_parts[0].rpartition('.') return '-'.join(classifier_parts[-3:]), extension
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dca654f9080264b1dcaabfc2fd19f26b1c4f59fe
https://github.com/voyages-sncf-technologies/nexus_uploader/blob/dca654f9080264b1dcaabfc2fd19f26b1c4f59fe/nexus_uploader/pypi.py#L62-L80
train
edelooff/sqlalchemy-json
sqlalchemy_json/__init__.py
NestedMutable.coerce
def coerce(cls, key, value): """Convert plain dictionary to NestedMutable.""" if value is None: return value if isinstance(value, cls): return value if isinstance(value, dict): return NestedMutableDict.coerce(key, value) if isinstance(value, list): return NestedMutableList.coerce(key, value) return super(cls).coerce(key, value)
python
def coerce(cls, key, value): """Convert plain dictionary to NestedMutable.""" if value is None: return value if isinstance(value, cls): return value if isinstance(value, dict): return NestedMutableDict.coerce(key, value) if isinstance(value, list): return NestedMutableList.coerce(key, value) return super(cls).coerce(key, value)
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Convert plain dictionary to NestedMutable.
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4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc
https://github.com/edelooff/sqlalchemy-json/blob/4e5df0d61dc09ed9a52e24ab291a1f1e14aa95cc/sqlalchemy_json/__init__.py#L36-L46
train
shoeffner/cvloop
tools/create_functions_ipynb.py
is_mod_function
def is_mod_function(mod, fun): """Checks if a function in a module was declared in that module. http://stackoverflow.com/a/1107150/3004221 Args: mod: the module fun: the function """ return inspect.isfunction(fun) and inspect.getmodule(fun) == mod
python
def is_mod_function(mod, fun): """Checks if a function in a module was declared in that module. http://stackoverflow.com/a/1107150/3004221 Args: mod: the module fun: the function """ return inspect.isfunction(fun) and inspect.getmodule(fun) == mod
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/tools/create_functions_ipynb.py#L15-L24
train
shoeffner/cvloop
tools/create_functions_ipynb.py
is_mod_class
def is_mod_class(mod, cls): """Checks if a class in a module was declared in that module. Args: mod: the module cls: the class """ return inspect.isclass(cls) and inspect.getmodule(cls) == mod
python
def is_mod_class(mod, cls): """Checks if a class in a module was declared in that module. Args: mod: the module cls: the class """ return inspect.isclass(cls) and inspect.getmodule(cls) == mod
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/tools/create_functions_ipynb.py#L27-L34
train
shoeffner/cvloop
tools/create_functions_ipynb.py
list_functions
def list_functions(mod_name): """Lists all functions declared in a module. http://stackoverflow.com/a/1107150/3004221 Args: mod_name: the module name Returns: A list of functions declared in that module. """ mod = sys.modules[mod_name] return [func.__name__ for func in mod.__dict__.values() if is_mod_function(mod, func)]
python
def list_functions(mod_name): """Lists all functions declared in a module. http://stackoverflow.com/a/1107150/3004221 Args: mod_name: the module name Returns: A list of functions declared in that module. """ mod = sys.modules[mod_name] return [func.__name__ for func in mod.__dict__.values() if is_mod_function(mod, func)]
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/tools/create_functions_ipynb.py#L37-L49
train
shoeffner/cvloop
tools/create_functions_ipynb.py
list_classes
def list_classes(mod_name): """Lists all classes declared in a module. Args: mod_name: the module name Returns: A list of functions declared in that module. """ mod = sys.modules[mod_name] return [cls.__name__ for cls in mod.__dict__.values() if is_mod_class(mod, cls)]
python
def list_classes(mod_name): """Lists all classes declared in a module. Args: mod_name: the module name Returns: A list of functions declared in that module. """ mod = sys.modules[mod_name] return [cls.__name__ for cls in mod.__dict__.values() if is_mod_class(mod, cls)]
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/tools/create_functions_ipynb.py#L52-L62
train
shoeffner/cvloop
tools/create_functions_ipynb.py
get_linenumbers
def get_linenumbers(functions, module, searchstr='def {}(image):\n'): """Returns a dictionary which maps function names to line numbers. Args: functions: a list of function names module: the module to look the functions up searchstr: the string to search for Returns: A dictionary with functions as keys and their line numbers as values. """ lines = inspect.getsourcelines(module)[0] line_numbers = {} for function in functions: try: line_numbers[function] = lines.index( searchstr.format(function)) + 1 except ValueError: print(r'Can not find `{}`'.format(searchstr.format(function))) line_numbers[function] = 0 return line_numbers
python
def get_linenumbers(functions, module, searchstr='def {}(image):\n'): """Returns a dictionary which maps function names to line numbers. Args: functions: a list of function names module: the module to look the functions up searchstr: the string to search for Returns: A dictionary with functions as keys and their line numbers as values. """ lines = inspect.getsourcelines(module)[0] line_numbers = {} for function in functions: try: line_numbers[function] = lines.index( searchstr.format(function)) + 1 except ValueError: print(r'Can not find `{}`'.format(searchstr.format(function))) line_numbers[function] = 0 return line_numbers
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/tools/create_functions_ipynb.py#L65-L84
train
shoeffner/cvloop
tools/create_functions_ipynb.py
format_doc
def format_doc(fun): """Formats the documentation in a nicer way and for notebook cells.""" SEPARATOR = '=============================' func = cvloop.functions.__dict__[fun] doc_lines = ['{}'.format(l).strip() for l in func.__doc__.split('\n')] if hasattr(func, '__init__'): doc_lines.append(SEPARATOR) doc_lines += ['{}'.format(l).strip() for l in func.__init__.__doc__.split('\n')] mod_lines = [] argblock = False returnblock = False for line in doc_lines: if line == SEPARATOR: mod_lines.append('\n#### `{}.__init__(...)`:\n\n'.format(fun)) elif 'Args:' in line: argblock = True if GENERATE_ARGS: mod_lines.append('**{}**\n'.format(line)) elif 'Returns:' in line: returnblock = True mod_lines.append('\n**{}**'.format(line)) elif not argblock and not returnblock: mod_lines.append('{}\n'.format(line)) elif argblock and not returnblock and ':' in line: if GENERATE_ARGS: mod_lines.append('- *{}:* {}\n'.format( *line.split(':'))) elif returnblock: mod_lines.append(line) else: mod_lines.append('{}\n'.format(line)) return mod_lines
python
def format_doc(fun): """Formats the documentation in a nicer way and for notebook cells.""" SEPARATOR = '=============================' func = cvloop.functions.__dict__[fun] doc_lines = ['{}'.format(l).strip() for l in func.__doc__.split('\n')] if hasattr(func, '__init__'): doc_lines.append(SEPARATOR) doc_lines += ['{}'.format(l).strip() for l in func.__init__.__doc__.split('\n')] mod_lines = [] argblock = False returnblock = False for line in doc_lines: if line == SEPARATOR: mod_lines.append('\n#### `{}.__init__(...)`:\n\n'.format(fun)) elif 'Args:' in line: argblock = True if GENERATE_ARGS: mod_lines.append('**{}**\n'.format(line)) elif 'Returns:' in line: returnblock = True mod_lines.append('\n**{}**'.format(line)) elif not argblock and not returnblock: mod_lines.append('{}\n'.format(line)) elif argblock and not returnblock and ':' in line: if GENERATE_ARGS: mod_lines.append('- *{}:* {}\n'.format( *line.split(':'))) elif returnblock: mod_lines.append(line) else: mod_lines.append('{}\n'.format(line)) return mod_lines
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/tools/create_functions_ipynb.py#L87-L121
train
shoeffner/cvloop
tools/create_functions_ipynb.py
main
def main(): """Main function creates the cvloop.functions example notebook.""" notebook = { 'cells': [ { 'cell_type': 'markdown', 'metadata': {}, 'source': [ '# cvloop functions\n\n', 'This notebook shows an overview over all cvloop ', 'functions provided in the [`cvloop.functions` module](', 'https://github.com/shoeffner/cvloop/blob/', 'develop/cvloop/functions.py).' ] }, ], 'nbformat': 4, 'nbformat_minor': 1, 'metadata': { 'language_info': { 'codemirror_mode': { 'name': 'ipython', 'version': 3 }, 'file_extension': '.py', 'mimetype': 'text/x-python', 'name': 'python', 'nbconvert_exporter': 'python', 'pygments_lexer': 'ipython3', 'version': '3.5.1+' } } } classes = list_classes('cvloop.functions') functions = list_functions('cvloop.functions') line_numbers_cls = get_linenumbers(classes, cvloop.functions, 'class {}:\n') line_numbers = get_linenumbers(functions, cvloop.functions) for cls in classes: line_number = line_numbers_cls[cls] notebook['cells'].append(create_description_cell(cls, line_number)) notebook['cells'].append(create_code_cell(cls, isclass=True)) for func in functions: line_number = line_numbers[func] notebook['cells'].append(create_description_cell(func, line_number)) notebook['cells'].append(create_code_cell(func)) with open(sys.argv[1], 'w') as nfile: json.dump(notebook, nfile, indent=4)
python
def main(): """Main function creates the cvloop.functions example notebook.""" notebook = { 'cells': [ { 'cell_type': 'markdown', 'metadata': {}, 'source': [ '# cvloop functions\n\n', 'This notebook shows an overview over all cvloop ', 'functions provided in the [`cvloop.functions` module](', 'https://github.com/shoeffner/cvloop/blob/', 'develop/cvloop/functions.py).' ] }, ], 'nbformat': 4, 'nbformat_minor': 1, 'metadata': { 'language_info': { 'codemirror_mode': { 'name': 'ipython', 'version': 3 }, 'file_extension': '.py', 'mimetype': 'text/x-python', 'name': 'python', 'nbconvert_exporter': 'python', 'pygments_lexer': 'ipython3', 'version': '3.5.1+' } } } classes = list_classes('cvloop.functions') functions = list_functions('cvloop.functions') line_numbers_cls = get_linenumbers(classes, cvloop.functions, 'class {}:\n') line_numbers = get_linenumbers(functions, cvloop.functions) for cls in classes: line_number = line_numbers_cls[cls] notebook['cells'].append(create_description_cell(cls, line_number)) notebook['cells'].append(create_code_cell(cls, isclass=True)) for func in functions: line_number = line_numbers[func] notebook['cells'].append(create_description_cell(func, line_number)) notebook['cells'].append(create_code_cell(func)) with open(sys.argv[1], 'w') as nfile: json.dump(notebook, nfile, indent=4)
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Main function creates the cvloop.functions example notebook.
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/tools/create_functions_ipynb.py#L161-L212
train
shoeffner/cvloop
cvloop/cvloop.py
prepare_axes
def prepare_axes(axes, title, size, cmap=None): """Prepares an axes object for clean plotting. Removes x and y axes labels and ticks, sets the aspect ratio to be equal, uses the size to determine the drawing area and fills the image with random colors as visual feedback. Creates an AxesImage to be shown inside the axes object and sets the needed properties. Args: axes: The axes object to modify. title: The title. size: The size of the expected image. cmap: The colormap if a custom color map is needed. (Default: None) Returns: The AxesImage's handle. """ if axes is None: return None # prepare axis itself axes.set_xlim([0, size[1]]) axes.set_ylim([size[0], 0]) axes.set_aspect('equal') axes.axis('off') if isinstance(cmap, str): title = '{} (cmap: {})'.format(title, cmap) axes.set_title(title) # prepare image data axes_image = image.AxesImage(axes, cmap=cmap, extent=(0, size[1], size[0], 0)) axes_image.set_data(np.random.random((size[0], size[1], 3))) axes.add_image(axes_image) return axes_image
python
def prepare_axes(axes, title, size, cmap=None): """Prepares an axes object for clean plotting. Removes x and y axes labels and ticks, sets the aspect ratio to be equal, uses the size to determine the drawing area and fills the image with random colors as visual feedback. Creates an AxesImage to be shown inside the axes object and sets the needed properties. Args: axes: The axes object to modify. title: The title. size: The size of the expected image. cmap: The colormap if a custom color map is needed. (Default: None) Returns: The AxesImage's handle. """ if axes is None: return None # prepare axis itself axes.set_xlim([0, size[1]]) axes.set_ylim([size[0], 0]) axes.set_aspect('equal') axes.axis('off') if isinstance(cmap, str): title = '{} (cmap: {})'.format(title, cmap) axes.set_title(title) # prepare image data axes_image = image.AxesImage(axes, cmap=cmap, extent=(0, size[1], size[0], 0)) axes_image.set_data(np.random.random((size[0], size[1], 3))) axes.add_image(axes_image) return axes_image
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/cvloop.py#L29-L67
train
shoeffner/cvloop
cvloop/cvloop.py
cvloop.connect_event_handlers
def connect_event_handlers(self): """Connects event handlers to the figure.""" self.figure.canvas.mpl_connect('close_event', self.evt_release) self.figure.canvas.mpl_connect('pause_event', self.evt_toggle_pause)
python
def connect_event_handlers(self): """Connects event handlers to the figure.""" self.figure.canvas.mpl_connect('close_event', self.evt_release) self.figure.canvas.mpl_connect('pause_event', self.evt_toggle_pause)
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Connects event handlers to the figure.
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/cvloop.py#L237-L240
train
shoeffner/cvloop
cvloop/cvloop.py
cvloop.evt_toggle_pause
def evt_toggle_pause(self, *args): # pylint: disable=unused-argument """Pauses and resumes the video source.""" if self.event_source._timer is None: # noqa: e501 pylint: disable=protected-access self.event_source.start() else: self.event_source.stop()
python
def evt_toggle_pause(self, *args): # pylint: disable=unused-argument """Pauses and resumes the video source.""" if self.event_source._timer is None: # noqa: e501 pylint: disable=protected-access self.event_source.start() else: self.event_source.stop()
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Pauses and resumes the video source.
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/cvloop.py#L249-L254
train
shoeffner/cvloop
cvloop/cvloop.py
cvloop.print_info
def print_info(self, capture): """Prints information about the unprocessed image. Reads one frame from the source to determine image colors, dimensions and data types. Args: capture: the source to read from. """ self.frame_offset += 1 ret, frame = capture.read() if ret: print('Capture Information') print('\tDimensions (HxW): {}x{}'.format(*frame.shape[0:2])) print('\tColor channels: {}'.format(frame.shape[2] if len(frame.shape) > 2 else 1)) print('\tColor range: {}-{}'.format(np.min(frame), np.max(frame))) print('\tdtype: {}'.format(frame.dtype)) else: print('No source found.')
python
def print_info(self, capture): """Prints information about the unprocessed image. Reads one frame from the source to determine image colors, dimensions and data types. Args: capture: the source to read from. """ self.frame_offset += 1 ret, frame = capture.read() if ret: print('Capture Information') print('\tDimensions (HxW): {}x{}'.format(*frame.shape[0:2])) print('\tColor channels: {}'.format(frame.shape[2] if len(frame.shape) > 2 else 1)) print('\tColor range: {}-{}'.format(np.min(frame), np.max(frame))) print('\tdtype: {}'.format(frame.dtype)) else: print('No source found.')
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Prints information about the unprocessed image. Reads one frame from the source to determine image colors, dimensions and data types. Args: capture: the source to read from.
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/cvloop.py#L256-L276
train
shoeffner/cvloop
cvloop/cvloop.py
cvloop.determine_size
def determine_size(self, capture): """Determines the height and width of the image source. If no dimensions are available, this method defaults to a resolution of 640x480, thus returns (480, 640). If capture has a get method it is assumed to understand `cv2.CAP_PROP_FRAME_WIDTH` and `cv2.CAP_PROP_FRAME_HEIGHT` to get the information. Otherwise it reads one frame from the source to determine image dimensions. Args: capture: the source to read from. Returns: A tuple containing integers of height and width (simple casts). """ width = 640 height = 480 if capture and hasattr(capture, 'get'): width = capture.get(cv2.CAP_PROP_FRAME_WIDTH) height = capture.get(cv2.CAP_PROP_FRAME_HEIGHT) else: self.frame_offset += 1 ret, frame = capture.read() if ret: width = frame.shape[1] height = frame.shape[0] return (int(height), int(width))
python
def determine_size(self, capture): """Determines the height and width of the image source. If no dimensions are available, this method defaults to a resolution of 640x480, thus returns (480, 640). If capture has a get method it is assumed to understand `cv2.CAP_PROP_FRAME_WIDTH` and `cv2.CAP_PROP_FRAME_HEIGHT` to get the information. Otherwise it reads one frame from the source to determine image dimensions. Args: capture: the source to read from. Returns: A tuple containing integers of height and width (simple casts). """ width = 640 height = 480 if capture and hasattr(capture, 'get'): width = capture.get(cv2.CAP_PROP_FRAME_WIDTH) height = capture.get(cv2.CAP_PROP_FRAME_HEIGHT) else: self.frame_offset += 1 ret, frame = capture.read() if ret: width = frame.shape[1] height = frame.shape[0] return (int(height), int(width))
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Determines the height and width of the image source. If no dimensions are available, this method defaults to a resolution of 640x480, thus returns (480, 640). If capture has a get method it is assumed to understand `cv2.CAP_PROP_FRAME_WIDTH` and `cv2.CAP_PROP_FRAME_HEIGHT` to get the information. Otherwise it reads one frame from the source to determine image dimensions. Args: capture: the source to read from. Returns: A tuple containing integers of height and width (simple casts).
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/cvloop.py#L278-L305
train
shoeffner/cvloop
cvloop/cvloop.py
cvloop._init_draw
def _init_draw(self): """Initializes the drawing of the frames by setting the images to random colors. This function is called by TimedAnimation. """ if self.original is not None: self.original.set_data(np.random.random((10, 10, 3))) self.processed.set_data(np.random.random((10, 10, 3)))
python
def _init_draw(self): """Initializes the drawing of the frames by setting the images to random colors. This function is called by TimedAnimation. """ if self.original is not None: self.original.set_data(np.random.random((10, 10, 3))) self.processed.set_data(np.random.random((10, 10, 3)))
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Initializes the drawing of the frames by setting the images to random colors. This function is called by TimedAnimation.
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/cvloop.py#L320-L328
train
shoeffner/cvloop
cvloop/cvloop.py
cvloop.read_frame
def read_frame(self): """Reads a frame and converts the color if needed. In case no frame is available, i.e. self.capture.read() returns False as the first return value, the event_source of the TimedAnimation is stopped, and if possible the capture source released. Returns: None if stopped, otherwise the color converted source image. """ ret, frame = self.capture.read() if not ret: self.event_source.stop() try: self.capture.release() except AttributeError: # has no release method, thus just pass pass return None if self.convert_color != -1 and is_color_image(frame): return cv2.cvtColor(frame, self.convert_color) return frame
python
def read_frame(self): """Reads a frame and converts the color if needed. In case no frame is available, i.e. self.capture.read() returns False as the first return value, the event_source of the TimedAnimation is stopped, and if possible the capture source released. Returns: None if stopped, otherwise the color converted source image. """ ret, frame = self.capture.read() if not ret: self.event_source.stop() try: self.capture.release() except AttributeError: # has no release method, thus just pass pass return None if self.convert_color != -1 and is_color_image(frame): return cv2.cvtColor(frame, self.convert_color) return frame
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Reads a frame and converts the color if needed. In case no frame is available, i.e. self.capture.read() returns False as the first return value, the event_source of the TimedAnimation is stopped, and if possible the capture source released. Returns: None if stopped, otherwise the color converted source image.
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3ddd311e9b679d16c8fd36779931380374de343c
https://github.com/shoeffner/cvloop/blob/3ddd311e9b679d16c8fd36779931380374de343c/cvloop/cvloop.py#L330-L351
train