File size: 4,632 Bytes
ed99a4a |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 |
---
task_categories:
- feature-extraction
language:
- en
tags:
- nlp
pretty_name: Cell Data train/test
size_categories:
- n<1K
---
# CellTissue Data train/test
*** ***Data curation still in progress*** ***
Papers manually annotated and reviewed, for the following entity types, where applicable:
- Cell type
- Cell line
- Tissue
- Cell context
- Cell component
### Dataset Description
- **Curated by:** [Christine Withers, ]
- **Funded by [optional]:** [Open Targets]
- **Shared by [optional]:** [More Information Needed]
- **Language(s) (NLP):** [English]
- **License:** [More Information Needed]
### Dataset Sources [optional]
The following papers were annotated for use as training / testing text data:
--------------------------------------------------------------------------
PMCID | Journal | Year
--------------------------------------------------------------------------
PMC12115102 | _Plants_ | 2025
PMC12101583 | _Cancer Biology & Therapy_ | 2025
PMC12081701 | _Nature Communications_ | 2025
PMC11075828 | _PLoS Pathogens_ | 2024
PMC10442740 | _Biomedical Reports_ | 2023
PMC12141184 | _Saudi Pharmaceutical Journal_ | 2025
PMC12118871 | _PLoS One_ | 2025
PMC12105127 | _BMC Complementary Medicine and Therapies_ | 2025
PMC12072392 | _International Journal of Molecular Sciences_ | 2025
PMC11699618 | _Iscience_ | 2024
PMC11641291 | _International Journal of Molecular Sciences_ | 2024
PMC11419360 | _PLoS Pathogens_ | 2024
--------------------------------------------------------------------------
## Uses
The aim for this data is for it to be used for the testing and correction of NER models generated in the OTAR3088 project.
## Dataset Structure
[More Information Needed]
### Curation Rationale
<!-- Motivation for the creation of this dataset. -->
[More Information Needed]
### Source Data
<!-- This section describes the source data (e.g. news text and headlines, social media posts, translated sentences, ...). -->
#### Data Collection and Processing
<!-- This section describes the data collection and processing process such as data selection criteria, filtering and normalization methods, tools and libraries used, etc. -->
[More Information Needed]
#### Who are the source data producers?
<!-- This section describes the people or systems who originally created the data. It should also include self-reported demographic or identity information for the source data creators if this information is available. -->
[More Information Needed]
### Annotations [optional]
<!-- If the dataset contains annotations which are not part of the initial data collection, use this section to describe them. -->
#### Annotation process
<!-- This section describes the annotation process such as annotation tools used in the process, the amount of data annotated, annotation guidelines provided to the annotators, interannotator statistics, annotation validation, etc. -->
[More Information Needed]
#### Who are the annotators?
<!-- This section describes the people or systems who created the annotations. -->
[More Information Needed]
#### Personal and Sensitive Information
<!-- State whether the dataset contains data that might be considered personal, sensitive, or private (e.g., data that reveals addresses, uniquely identifiable names or aliases, racial or ethnic origins, sexual orientations, religious beliefs, political opinions, financial or health data, etc.). If efforts were made to anonymize the data, describe the anonymization process. -->
[More Information Needed]
## Bias, Risks, and Limitations
<!-- This section is meant to convey both technical and sociotechnical limitations. -->
[More Information Needed]
### Recommendations
<!-- This section is meant to convey recommendations with respect to the bias, risk, and technical limitations. -->
Users should be made aware of the risks, biases and limitations of the dataset. More information needed for further recommendations.
## Citation [optional]
<!-- If there is a paper or blog post introducing the dataset, the APA and Bibtex information for that should go in this section. -->
**BibTeX:**
[More Information Needed]
**APA:**
[More Information Needed]
## Glossary [optional]
<!-- If relevant, include terms and calculations in this section that can help readers understand the dataset or dataset card. -->
[More Information Needed]
## More Information [optional]
[More Information Needed]
## Dataset Card Authors [optional]
[More Information Needed]
## Dataset Card Contact
[More Information Needed] |